ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags30i10 |
|---|---|
| Clone Library Name | barley_pub |
>THRC_SOLTU (Q9MT28) Threonine synthase, chloroplast precursor (EC 4.2.3.1)| (TS) Length = 519 Score = 243 bits (621), Expect = 3e-64 Identities = 122/158 (77%), Positives = 134/158 (84%) Frame = -1 Query: 681 LVCAQAANANPLYRYYKSGYTDFQSLVAGTTFASAIQIGDPVSIDRAVVALKATDGIVEE 502 LVCAQAANANPLY +YKSG+ DF+ + A TTFASAIQIGDPVSIDRAV AL+ +GIVEE Sbjct: 355 LVCAQAANANPLYLHYKSGWKDFKPVKANTTFASAIQIGDPVSIDRAVFALQQCNGIVEE 414 Query: 501 ATEEELMDATALADLTGMFACPHTGVALAALFKLRDQGIIGTNDRTVVVSTAHGLKFTQS 322 ATEEELMDA A AD TGMF CPHTGVAL ALFKLR+ G+I DRTVVVSTAHGLKFTQS Sbjct: 415 ATEEELMDAMAQADSTGMFICPHTGVALTALFKLRNSGVIAPTDRTVVVSTAHGLKFTQS 474 Query: 321 KIDYHDKNIKDMLCQYANPPISVKPDFGSVMDVLQKKL 208 KIDYH K IKDM C++ANPP+ VK DFGSVMDVL+ L Sbjct: 475 KIDYHSKEIKDMECRFANPPVEVKADFGSVMDVLKSYL 512
>THRC_ARATH (Q9S7B5) Threonine synthase, chloroplast precursor (EC 4.2.3.1)| (TS) Length = 526 Score = 241 bits (614), Expect = 2e-63 Identities = 119/158 (75%), Positives = 133/158 (84%) Frame = -1 Query: 681 LVCAQAANANPLYRYYKSGYTDFQSLVAGTTFASAIQIGDPVSIDRAVVALKATDGIVEE 502 +VCAQAANANPLY +YKSG+ DF+ + A TTFASAIQIGDPVSIDRAV ALK +GIVEE Sbjct: 362 MVCAQAANANPLYLHYKSGWKDFKPMTASTTFASAIQIGDPVSIDRAVYALKKCNGIVEE 421 Query: 501 ATEEELMDATALADLTGMFACPHTGVALAALFKLRDQGIIGTNDRTVVVSTAHGLKFTQS 322 ATEEELMDA A AD TGMF CPHTGVAL ALFKLR+QG+I DRTVVVSTAHGLKFTQS Sbjct: 422 ATEEELMDAMAQADSTGMFICPHTGVALTALFKLRNQGVIAPTDRTVVVSTAHGLKFTQS 481 Query: 321 KIDYHDKNIKDMLCQYANPPISVKPDFGSVMDVLQKKL 208 KIDYH I DM C+++NPP+ VK DFG+VMDVL+ L Sbjct: 482 KIDYHSNAIPDMACRFSNPPVDVKADFGAVMDVLKSYL 519
>THRC_METJA (Q58860) Probable threonine synthase (EC 4.2.3.1) (TS)| Length = 405 Score = 72.0 bits (175), Expect = 2e-12 Identities = 43/127 (33%), Positives = 72/127 (56%), Gaps = 1/127 (0%) Frame = -1 Query: 669 QAANANPLYRYYKSGYTDFQSLVAGTTFASAIQIGDPVSIDRAVVALKATDGIVEEATEE 490 QA A P+ ++ D T A+AI+IG+PV+ +A+ A+ ++ G E T+E Sbjct: 264 QADGAKPIVEAFRKRAKDIIPYKNPETIATAIRIGNPVNAPKALDAIYSSGGYAEAVTDE 323 Query: 489 ELMDA-TALADLTGMFACPHTGVALAALFKLRDQGIIGTNDRTVVVSTAHGLKFTQSKID 313 E+++A LA G+F P + ++A L KL ++GII ++R V ++T HGLK + I Sbjct: 324 EIVEAQKLLARKEGIFVEPASASSIAGLKKLLEEGIIDRDERIVCITTGHGLKDPDAAIR 383 Query: 312 YHDKNIK 292 ++ IK Sbjct: 384 ASEEPIK 390
>THRC_BACSU (P04990) Threonine synthase (EC 4.2.3.1)| Length = 352 Score = 59.7 bits (143), Expect = 8e-09 Identities = 34/94 (36%), Positives = 57/94 (60%), Gaps = 1/94 (1%) Frame = -1 Query: 591 TFASAIQIGDPVSIDRAVVALKATDGIVEEATEEELMDATAL-ADLTGMFACPHTGVALA 415 T A+AI+IG+P S D+AV A + ++G ++E T++E++ A L A + G+FA P + ++A Sbjct: 233 TIATAIRIGNPASWDKAVKAAEESNGKIDEVTDDEILHAYQLIARVEGVFAEPGSCASIA 292 Query: 414 ALFKLRDQGIIGTNDRTVVVSTAHGLKFTQSKID 313 + K G I + V V T +GLK + +D Sbjct: 293 GVLKQVKSGEIPKGSKVVAVLTGNGLKDPNTAVD 326
>THRC_BACSL (P09123) Threonine synthase (EC 4.2.3.1)| Length = 352 Score = 52.4 bits (124), Expect = 1e-06 Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 1/87 (1%) Frame = -1 Query: 591 TFASAIQIGDPVSIDRAVVALKATDGIVEEATEEELMDA-TALADLTGMFACPHTGVALA 415 T A+AI+IG+P S AV A + + G ++ ++EE++ A LA G+FA P + +LA Sbjct: 233 TIATAIRIGNPASWSYAVEAAEQSHGEIDMVSDEEILHAYRLLAKTEGVFAEPGSNASLA 292 Query: 414 ALFKLRDQGIIGTNDRTVVVSTAHGLK 334 + K + G I + V V T +GLK Sbjct: 293 GVIKHVESGKIKKGETVVAVLTGNGLK 319
>THRC_BACHD (Q9K7E3) Threonine synthase (EC 4.2.3.1)| Length = 354 Score = 52.4 bits (124), Expect = 1e-06 Identities = 36/99 (36%), Positives = 53/99 (53%), Gaps = 1/99 (1%) Frame = -1 Query: 591 TFASAIQIGDPVSIDRAVVALKATDGIVEEATEEELMDA-TALADLTGMFACPHTGVALA 415 T A+AI+IG+P S AV A ++G ++E T+EE++ A LA G+FA P + ++A Sbjct: 235 TIATAIRIGNPASWTYAVEAAAESNGKIDEVTDEEILAAYQLLAQKEGVFAEPASCASIA 294 Query: 414 ALFKLRDQGIIGTNDRTVVVSTAHGLKFTQSKIDYHDKN 298 L K G I V V T +GLK + + D N Sbjct: 295 GLRKQIASGEIKKGSTVVCVLTGNGLKDPNTAMSTIDVN 333
>THRC_MYCTU (P66902) Probable threonine synthase (EC 4.2.3.1)| Length = 360 Score = 48.1 bits (113), Expect = 2e-05 Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 1/87 (1%) Frame = -1 Query: 591 TFASAIQIGDPVSIDRAVVALKATDGIVEEATEEELMDATAL-ADLTGMFACPHTGVALA 415 T A+AI+IG P S AV A + + G A++EE++ A L A + G+F P + ++A Sbjct: 245 TIATAIRIGSPASWTSAVEAQQQSKGRFLAASDEEILAAYHLVARVEGVFVEPASAASIA 304 Query: 414 ALFKLRDQGIIGTNDRTVVVSTAHGLK 334 L K D G + V T +GLK Sbjct: 305 GLLKAIDDGWVARGSTVVCTVTGNGLK 331
>THRC_MYCLE (P45837) Probable threonine synthase (EC 4.2.3.1)| Length = 360 Score = 48.1 bits (113), Expect = 2e-05 Identities = 32/87 (36%), Positives = 45/87 (51%), Gaps = 1/87 (1%) Frame = -1 Query: 591 TFASAIQIGDPVSIDRAVVALKATDGIVEEATEEELMDATAL-ADLTGMFACPHTGVALA 415 T A+AI+IG P S AV A + + G AT+EE++ A L A G+F P + ++A Sbjct: 245 TIATAIRIGSPASWTSAVEAQQQSKGRFLAATDEEILAAYHLVARAEGVFVEPASAASIA 304 Query: 414 ALFKLRDQGIIGTNDRTVVVSTAHGLK 334 L K D G + V T +GLK Sbjct: 305 GLLKAIDGGWVARGSTVVCTITGNGLK 331
>THRC_MYCBO (P66903) Probable threonine synthase (EC 4.2.3.1)| Length = 360 Score = 48.1 bits (113), Expect = 2e-05 Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 1/87 (1%) Frame = -1 Query: 591 TFASAIQIGDPVSIDRAVVALKATDGIVEEATEEELMDATAL-ADLTGMFACPHTGVALA 415 T A+AI+IG P S AV A + + G A++EE++ A L A + G+F P + ++A Sbjct: 245 TIATAIRIGSPASWTSAVEAQQQSKGRFLAASDEEILAAYHLVARVEGVFVEPASAASIA 304 Query: 414 ALFKLRDQGIIGTNDRTVVVSTAHGLK 334 L K D G + V T +GLK Sbjct: 305 GLLKAIDDGWVARGSTVVCTVTGNGLK 331
>THRC_SYNY3 (P74193) Threonine synthase (EC 4.2.3.1)| Length = 382 Score = 48.1 bits (113), Expect = 2e-05 Identities = 32/101 (31%), Positives = 52/101 (51%), Gaps = 1/101 (0%) Frame = -1 Query: 591 TFASAIQIGDPVSIDRAVVALKATDGIVEEATEEELMDA-TALADLTGMFACPHTGVALA 415 T A+AI+IG+P + D+A A + ++G T+ E+++A LA G+F P + ++A Sbjct: 268 TLATAIRIGNPANWDKAWAASRESNGEFHPVTDAEILEAYRILAAEEGVFCEPASAASVA 327 Query: 414 ALFKLRDQGIIGTNDRTVVVSTAHGLKFTQSKIDYHDKNIK 292 L K +DQ G V V T +GLK + +K Sbjct: 328 GLLKQKDQVPAGAT--VVCVLTGNGLKDPDCAVQNSGNQVK 366
>YMT4_YEAST (Q04213) Hypothetical 55.4 kDa protein in MCM1-NUP116 intergenic| region Length = 475 Score = 31.2 bits (69), Expect = 3.1 Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 8/75 (10%) Frame = -1 Query: 336 KFTQSKIDYHDKN------IKDMLCQYANPPISVKPDFGSVMDVLQKKLN--GKI*AYLL 181 K + K+D DK + D+LC N +S+K DF ++D LQ L+ G ++ Sbjct: 334 KHVEIKLDLEDKLAGINKLLCDVLCSAINQAVSIKDDFEIILDELQIALDTRGSRNEFIT 393 Query: 180 LTSRVPSCLLSQRVV 136 + S LL+ R++ Sbjct: 394 IFQSNNSLLLNFRIL 408
>THNSL_MOUSE (Q8BH55) Threonine synthase-like 1| Length = 747 Score = 30.0 bits (66), Expect = 6.9 Identities = 32/147 (21%), Positives = 58/147 (39%), Gaps = 31/147 (21%) Frame = -1 Query: 678 VCAQAANANPLYRYYKSGYTDFQSLVAGTTFASAIQIGDPVSIDRAVVALKATDG----- 514 +CA N + L + K+G+ D ++ TF+ +I I +++R + + DG Sbjct: 531 ICASNQN-HVLTDFIKTGHYDLRNRKLAQTFSPSIDILKSSNLERHLYLMANKDGQLMAN 589 Query: 513 ----------------IVEEATEEELMD----------ATALADLTGMFACPHTGVALAA 412 +VE+ +E + D + + +G PHT VA Sbjct: 590 LYHQLESQLHFRIEKMLVEKLQQEFVADWCSEGECLAAISTTYNASGYILDPHTAVAKVV 649 Query: 411 LFKLRDQGIIGTNDRTVVVSTAHGLKF 331 K++D+ ++ STAH KF Sbjct: 650 ADKMQDKSC-----PVLIASTAHYSKF 671
>VAB1_CAEEL (O61460) Ephrin receptor 1 precursor (EC 2.7.10.1)| (Tyrosine-protein kinase Eph receptor) (Variable abnormal protein 1) Length = 1122 Score = 29.6 bits (65), Expect = 9.0 Identities = 19/51 (37%), Positives = 24/51 (47%) Frame = +1 Query: 358 NHRAVVSANYTLVAQLEQSSKCNPSVWAGEHPSEVSKRRRIHEFLLCSFLD 510 N RA V+ NY ++ NPS W H EV RRI+ LL + D Sbjct: 76 NQRAYVTCNYDMI---------NPSNWLFSHFIEVKTARRIYIELLFNTRD 117 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 99,970,648 Number of Sequences: 219361 Number of extensions: 2086893 Number of successful extensions: 5315 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 5180 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5307 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6769072002 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
