| Clone Name | rbags30i10 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 438 bits (221), Expect = e-119 Identities = 425/493 (86%) Strand = Plus / Plus Query: 189 aagctcagatcttaccattgagcttcttctggagaacatccatgacagaaccaaagtcag 248 ||||||||||||||||||| ||||| ||||||||||||||||| |||||| ||||||||| Sbjct: 28647553 aagctcagatcttaccattcagcttgttctggagaacatccatcacagaagcaaagtcag 28647612 Query: 249 gcttcacactgatgggtggattggcatactggcacaacatgtccttgatgttcttatcgt 308 ||||||| |||| |||||||| || |||||||||| |||||||||||||||| | || | Sbjct: 28647613 ccttcacattgattggtggattagcgtactggcacagcatgtccttgatgttcctgtcat 28647672 Query: 309 ggtagtcgatctttgattgtgtgaactttagcccgtgtgctgtactaacaaccaccgtgc 368 ||||||| ||||| |||||||||||||| ||||| || ||||||||||||||||| |||| Sbjct: 28647673 ggtagtctatcttcgattgtgtgaacttaagcccatgcgctgtactaacaaccactgtgc 28647732 Query: 369 ggtcgttagtgccaattataccctggtcgcgcagcttgaacagagcagcaagtgcaaccc 428 |||| |||| || ||||| | |||||| || |||||||||| ||||||||||||||||| Sbjct: 28647733 ggtcattaggcccgattatgcgctggtctcgaagcttgaacaaagcagcaagtgcaaccc 28647792 Query: 429 cagtgtgtgggcaggcgaacatcccagtgaggtcagcaagcgccgtcgcatccatgagtt 488 | |||||||||||||| ||||| || ||| |||||||||| | | | ||||||||||||| Sbjct: 28647793 cggtgtgtgggcaggcaaacattccggtgcggtcagcaagtgacattgcatccatgagtt 28647852 Query: 489 cctcctctgtagcttcctcgacaataccatcagttgccttcagtgcaacaaccgctcggt 548 | ||||| ||||||||||| |||||||| |||||||||||||| || || || || |||| Sbjct: 28647853 cttcctccgtagcttcctcaacaataccgtcagttgccttcagggcgaccactgcacggt 28647912 Query: 549 caatagacactggatcaccaatctgtatggcagatgcaaatgtagttccagcaacaagtg 608 | | ||| ||||||||||||||||||||||||||||||||||||||| | || ||| ||| Sbjct: 28647913 cgacagatactggatcaccaatctgtatggcagatgcaaatgtagtttcggctacacgtg 28647972 Query: 609 actggaagtcagtatacccagacttgtaataccggtacagtgggtttgcgttggcggcct 668 |||||| ||||| |||| |||||||| |||| |||| || |||||||| || || | Sbjct: 28647973 gctggaaatcagtccaccctgacttgtagaaccgatacaacggatttgcgtttgcagctt 28648032 Query: 669 gtgcacatacaag 681 |||| |||||||| Sbjct: 28648033 gtgcgcatacaag 28648045 Score = 65.9 bits (33), Expect = 2e-07 Identities = 68/77 (88%), Gaps = 2/77 (2%) Strand = Plus / Plus Query: 33 aagtacaaggaa-agctctatccacttttgcctatagttagaagagcctcaagaacctgg 91 |||||||||||| |||||||||||||| || |||||||||||||||||||| ||||| | Sbjct: 28647377 aagtacaaggaacagctctatccacttatgtgtatagttagaagagcctcaa-aacctag 28647435 Query: 92 tactggaaaataaagat 108 |||| ||| ||||||| Sbjct: 28647436 tactacaaattaaagat 28647452 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 gtactggaaaataaagatga 110 |||||||||||||||||||| Sbjct: 921339 gtactggaaaataaagatga 921320
>dbj|AP003248.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0431H09 Length = 166886 Score = 438 bits (221), Expect = e-119 Identities = 425/493 (86%) Strand = Plus / Plus Query: 189 aagctcagatcttaccattgagcttcttctggagaacatccatgacagaaccaaagtcag 248 ||||||||||||||||||| ||||| ||||||||||||||||| |||||| ||||||||| Sbjct: 30627 aagctcagatcttaccattcagcttgttctggagaacatccatcacagaagcaaagtcag 30686 Query: 249 gcttcacactgatgggtggattggcatactggcacaacatgtccttgatgttcttatcgt 308 ||||||| |||| |||||||| || |||||||||| |||||||||||||||| | || | Sbjct: 30687 ccttcacattgattggtggattagcgtactggcacagcatgtccttgatgttcctgtcat 30746 Query: 309 ggtagtcgatctttgattgtgtgaactttagcccgtgtgctgtactaacaaccaccgtgc 368 ||||||| ||||| |||||||||||||| ||||| || ||||||||||||||||| |||| Sbjct: 30747 ggtagtctatcttcgattgtgtgaacttaagcccatgcgctgtactaacaaccactgtgc 30806 Query: 369 ggtcgttagtgccaattataccctggtcgcgcagcttgaacagagcagcaagtgcaaccc 428 |||| |||| || ||||| | |||||| || |||||||||| ||||||||||||||||| Sbjct: 30807 ggtcattaggcccgattatgcgctggtctcgaagcttgaacaaagcagcaagtgcaaccc 30866 Query: 429 cagtgtgtgggcaggcgaacatcccagtgaggtcagcaagcgccgtcgcatccatgagtt 488 | |||||||||||||| ||||| || ||| |||||||||| | | | ||||||||||||| Sbjct: 30867 cggtgtgtgggcaggcaaacattccggtgcggtcagcaagtgacattgcatccatgagtt 30926 Query: 489 cctcctctgtagcttcctcgacaataccatcagttgccttcagtgcaacaaccgctcggt 548 | ||||| ||||||||||| |||||||| |||||||||||||| || || || || |||| Sbjct: 30927 cttcctccgtagcttcctcaacaataccgtcagttgccttcagggcgaccactgcacggt 30986 Query: 549 caatagacactggatcaccaatctgtatggcagatgcaaatgtagttccagcaacaagtg 608 | | ||| ||||||||||||||||||||||||||||||||||||||| | || ||| ||| Sbjct: 30987 cgacagatactggatcaccaatctgtatggcagatgcaaatgtagtttcggctacacgtg 31046 Query: 609 actggaagtcagtatacccagacttgtaataccggtacagtgggtttgcgttggcggcct 668 |||||| ||||| |||| |||||||| |||| |||| || |||||||| || || | Sbjct: 31047 gctggaaatcagtccaccctgacttgtagaaccgatacaacggatttgcgtttgcagctt 31106 Query: 669 gtgcacatacaag 681 |||| |||||||| Sbjct: 31107 gtgcgcatacaag 31119 Score = 65.9 bits (33), Expect = 2e-07 Identities = 68/77 (88%), Gaps = 2/77 (2%) Strand = Plus / Plus Query: 33 aagtacaaggaa-agctctatccacttttgcctatagttagaagagcctcaagaacctgg 91 |||||||||||| |||||||||||||| || |||||||||||||||||||| ||||| | Sbjct: 30451 aagtacaaggaacagctctatccacttatgtgtatagttagaagagcctcaa-aacctag 30509 Query: 92 tactggaaaataaagat 108 |||| ||| ||||||| Sbjct: 30510 tactacaaattaaagat 30526
>dbj|AK109336.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-C12, full insert sequence Length = 1880 Score = 438 bits (221), Expect = e-119 Identities = 425/493 (86%) Strand = Plus / Minus Query: 189 aagctcagatcttaccattgagcttcttctggagaacatccatgacagaaccaaagtcag 248 ||||||||||||||||||| ||||| ||||||||||||||||| |||||| ||||||||| Sbjct: 1637 aagctcagatcttaccattcagcttgttctggagaacatccatcacagaagcaaagtcag 1578 Query: 249 gcttcacactgatgggtggattggcatactggcacaacatgtccttgatgttcttatcgt 308 ||||||| |||| |||||||| || |||||||||| |||||||||||||||| | || | Sbjct: 1577 ccttcacattgattggtggattagcgtactggcacagcatgtccttgatgttcctgtcat 1518 Query: 309 ggtagtcgatctttgattgtgtgaactttagcccgtgtgctgtactaacaaccaccgtgc 368 ||||||| ||||| |||||||||||||| ||||| || ||||||||||||||||| |||| Sbjct: 1517 ggtagtctatcttcgattgtgtgaacttaagcccatgcgctgtactaacaaccactgtgc 1458 Query: 369 ggtcgttagtgccaattataccctggtcgcgcagcttgaacagagcagcaagtgcaaccc 428 |||| |||| || ||||| | |||||| || |||||||||| ||||||||||||||||| Sbjct: 1457 ggtcattaggcccgattatgcgctggtctcgaagcttgaacaaagcagcaagtgcaaccc 1398 Query: 429 cagtgtgtgggcaggcgaacatcccagtgaggtcagcaagcgccgtcgcatccatgagtt 488 | |||||||||||||| ||||| || ||| |||||||||| | | | ||||||||||||| Sbjct: 1397 cggtgtgtgggcaggcaaacattccggtgcggtcagcaagtgacattgcatccatgagtt 1338 Query: 489 cctcctctgtagcttcctcgacaataccatcagttgccttcagtgcaacaaccgctcggt 548 | ||||| ||||||||||| |||||||| |||||||||||||| || || || || |||| Sbjct: 1337 cttcctccgtagcttcctcaacaataccgtcagttgccttcagggcgaccactgcacggt 1278 Query: 549 caatagacactggatcaccaatctgtatggcagatgcaaatgtagttccagcaacaagtg 608 | | ||| ||||||||||||||||||||||||||||||||||||||| | || ||| ||| Sbjct: 1277 cgacagatactggatcaccaatctgtatggcagatgcaaatgtagtttcggctacacgtg 1218 Query: 609 actggaagtcagtatacccagacttgtaataccggtacagtgggtttgcgttggcggcct 668 |||||| ||||| |||| |||||||| |||| |||| || |||||||| || || | Sbjct: 1217 gctggaaatcagtccaccctgacttgtagaaccgatacaacggatttgcgtttgcagctt 1158 Query: 669 gtgcacatacaag 681 |||| |||||||| Sbjct: 1157 gtgcgcatacaag 1145 Score = 65.9 bits (33), Expect = 2e-07 Identities = 68/77 (88%), Gaps = 2/77 (2%) Strand = Plus / Minus Query: 33 aagtacaaggaa-agctctatccacttttgcctatagttagaagagcctcaagaacctgg 91 |||||||||||| |||||||||||||| || |||||||||||||||||||| ||||| | Sbjct: 1813 aagtacaaggaacagctctatccacttatgtgtatagttagaagagcctcaa-aacctag 1755 Query: 92 tactggaaaataaagat 108 |||| ||| ||||||| Sbjct: 1754 tactacaaattaaagat 1738
>dbj|AK073138.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024E01, full insert sequence Length = 1902 Score = 438 bits (221), Expect = e-119 Identities = 425/493 (86%) Strand = Plus / Minus Query: 189 aagctcagatcttaccattgagcttcttctggagaacatccatgacagaaccaaagtcag 248 ||||||||||||||||||| ||||| ||||||||||||||||| |||||| ||||||||| Sbjct: 1654 aagctcagatcttaccattcagcttgttctggagaacatccatcacagaagcaaagtcag 1595 Query: 249 gcttcacactgatgggtggattggcatactggcacaacatgtccttgatgttcttatcgt 308 ||||||| |||| |||||||| || |||||||||| |||||||||||||||| | || | Sbjct: 1594 ccttcacattgattggtggattagcgtactggcacagcatgtccttgatgttcctgtcat 1535 Query: 309 ggtagtcgatctttgattgtgtgaactttagcccgtgtgctgtactaacaaccaccgtgc 368 ||||||| ||||| |||||||||||||| ||||| || ||||||||||||||||| |||| Sbjct: 1534 ggtagtctatcttcgattgtgtgaacttaagcccatgcgctgtactaacaaccactgtgc 1475 Query: 369 ggtcgttagtgccaattataccctggtcgcgcagcttgaacagagcagcaagtgcaaccc 428 |||| |||| || ||||| | |||||| || |||||||||| ||||||||||||||||| Sbjct: 1474 ggtcattaggcccgattatgcgctggtctcgaagcttgaacaaagcagcaagtgcaaccc 1415 Query: 429 cagtgtgtgggcaggcgaacatcccagtgaggtcagcaagcgccgtcgcatccatgagtt 488 | |||||||||||||| ||||| || ||| |||||||||| | | | ||||||||||||| Sbjct: 1414 cggtgtgtgggcaggcaaacattccggtgcggtcagcaagtgacattgcatccatgagtt 1355 Query: 489 cctcctctgtagcttcctcgacaataccatcagttgccttcagtgcaacaaccgctcggt 548 | ||||| ||||||||||| |||||||| |||||||||||||| || || || || |||| Sbjct: 1354 cttcctccgtagcttcctcaacaataccgtcagttgccttcagggcgaccactgcacggt 1295 Query: 549 caatagacactggatcaccaatctgtatggcagatgcaaatgtagttccagcaacaagtg 608 | | ||| ||||||||||||||||||||||||||||||||||||||| | || ||| ||| Sbjct: 1294 cgacagatactggatcaccaatctgtatggcagatgcaaatgtagtttcggctacacgtg 1235 Query: 609 actggaagtcagtatacccagacttgtaataccggtacagtgggtttgcgttggcggcct 668 |||||| ||||| |||| |||||||| |||| |||| || |||||||| || || | Sbjct: 1234 gctggaaatcagtccaccctgacttgtagaaccgatacaacggatttgcgtttgcagctt 1175 Query: 669 gtgcacatacaag 681 |||| |||||||| Sbjct: 1174 gtgcgcatacaag 1162 Score = 65.9 bits (33), Expect = 2e-07 Identities = 68/77 (88%), Gaps = 2/77 (2%) Strand = Plus / Minus Query: 33 aagtacaaggaa-agctctatccacttttgcctatagttagaagagcctcaagaacctgg 91 |||||||||||| |||||||||||||| || |||||||||||||||||||| ||||| | Sbjct: 1830 aagtacaaggaacagctctatccacttatgtgtatagttagaagagcctcaa-aacctag 1772 Query: 92 tactggaaaataaagat 108 |||| ||| ||||||| Sbjct: 1771 tactacaaattaaagat 1755
>ref|NM_192166.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1578 Score = 430 bits (217), Expect = e-117 Identities = 421/489 (86%) Strand = Plus / Minus Query: 193 tcagatcttaccattgagcttcttctggagaacatccatgacagaaccaaagtcaggctt 252 ||||||||||||||| ||||| ||||||||||||||||| |||||| ||||||||| ||| Sbjct: 1578 tcagatcttaccattcagcttgttctggagaacatccatcacagaagcaaagtcagcctt 1519 Query: 253 cacactgatgggtggattggcatactggcacaacatgtccttgatgttcttatcgtggta 312 |||| |||| |||||||| || |||||||||| |||||||||||||||| | || ||||| Sbjct: 1518 cacattgattggtggattagcgtactggcacagcatgtccttgatgttcctgtcatggta 1459 Query: 313 gtcgatctttgattgtgtgaactttagcccgtgtgctgtactaacaaccaccgtgcggtc 372 ||| ||||| |||||||||||||| ||||| || ||||||||||||||||| |||||||| Sbjct: 1458 gtctatcttcgattgtgtgaacttaagcccatgcgctgtactaacaaccactgtgcggtc 1399 Query: 373 gttagtgccaattataccctggtcgcgcagcttgaacagagcagcaagtgcaaccccagt 432 |||| || ||||| | |||||| || |||||||||| |||||||||||||||||| || Sbjct: 1398 attaggcccgattatgcgctggtctcgaagcttgaacaaagcagcaagtgcaaccccggt 1339 Query: 433 gtgtgggcaggcgaacatcccagtgaggtcagcaagcgccgtcgcatccatgagttcctc 492 |||||||||||| ||||| || ||| |||||||||| | | | |||||||||||||| || Sbjct: 1338 gtgtgggcaggcaaacattccggtgcggtcagcaagtgacattgcatccatgagttcttc 1279 Query: 493 ctctgtagcttcctcgacaataccatcagttgccttcagtgcaacaaccgctcggtcaat 552 ||| ||||||||||| |||||||| |||||||||||||| || || || || ||||| | Sbjct: 1278 ctccgtagcttcctcaacaataccgtcagttgccttcagggcgaccactgcacggtcgac 1219 Query: 553 agacactggatcaccaatctgtatggcagatgcaaatgtagttccagcaacaagtgactg 612 ||| ||||||||||||||||||||||||||||||||||||||| | || ||| ||| ||| Sbjct: 1218 agatactggatcaccaatctgtatggcagatgcaaatgtagtttcggctacacgtggctg 1159 Query: 613 gaagtcagtatacccagacttgtaataccggtacagtgggtttgcgttggcggcctgtgc 672 ||| ||||| |||| |||||||| |||| |||| || |||||||| || || ||||| Sbjct: 1158 gaaatcagtccaccctgacttgtagaaccgatacaacggatttgcgtttgcagcttgtgc 1099 Query: 673 acatacaag 681 |||||||| Sbjct: 1098 gcatacaag 1090
>gb|BT018440.1| Zea mays clone EL01N0372H09.d mRNA sequence Length = 1857 Score = 392 bits (198), Expect = e-106 Identities = 348/398 (87%) Strand = Plus / Minus Query: 197 atcttaccattgagcttcttctggagaacatccatgacagaaccaaagtcaggcttcaca 256 |||||||||||||| || || |||||||||||||| |||||||||||||||| ||||||| Sbjct: 1606 atcttaccattgagatttttttggagaacatccatcacagaaccaaagtcagccttcaca 1547 Query: 257 ctgatgggtggattggcatactggcacaacatgtccttgatgttcttatcgtggtagtcg 316 ||||| |||||||| ||||||||||| | |||||| |||||||| || || |||||||| Sbjct: 1546 ctgatcggtggattagcatactggcaaaccatgtctttgatgtttttgtcatggtagtca 1487 Query: 317 atctttgattgtgtgaactttagcccgtgtgctgtactaacaaccaccgtgcggtcgtta 376 |||||||| || |||||||| ||||| || ||||| ||||||||||| |||||||| ||| Sbjct: 1486 atctttgactgcgtgaacttcagcccatgagctgtgctaacaaccacagtgcggtcatta 1427 Query: 377 gtgccaattataccctggtcgcgcagcttgaacagagcagcaagtgcaaccccagtgtgt 436 | ||||||||||| ||| | | ||||| |||| ||||||||||||||||||||| ||| Sbjct: 1426 gggccaattatacgctgaccctgaagcttaaacaaagcagcaagtgcaaccccagtatgt 1367 Query: 437 gggcaggcgaacatcccagtgaggtcagcaagcgccgtcgcatccatgagttcctcctct 496 ||||| || |||||||||||| |||||||||||||||| |||||||| || ||||||||| Sbjct: 1366 gggcaagcaaacatcccagtgcggtcagcaagcgccgttgcatccattagctcctcctct 1307 Query: 497 gtagcttcctcgacaataccatcagttgccttcagtgcaacaaccgctcggtcaatagac 556 ||||| ||||| |||||||| ||||| |||||||| || || ||||| ||||||| ||| Sbjct: 1306 gtagcctcctccacaataccgtcagtggccttcagcgcgaccaccgcacggtcaacagat 1247 Query: 557 actggatcaccaatctgtatggcagatgcaaatgtagt 594 || ||||||||||||||||| ||||||||||||||||| Sbjct: 1246 acaggatcaccaatctgtatcgcagatgcaaatgtagt 1209 Score = 54.0 bits (27), Expect = 6e-04 Identities = 49/55 (89%), Gaps = 1/55 (1%) Strand = Plus / Minus Query: 5 ttattattgatattacatgatacagatgaagtacaaggaa-agctctatccactt 58 |||||||| |||||||||| | |||| |||||||||||| |||||||||||||| Sbjct: 1831 ttattattcatattacatgcaatagataaagtacaaggaacagctctatccactt 1777
>gb|AY109760.1| Zea mays CL120_1 mRNA sequence Length = 1901 Score = 369 bits (186), Expect = 8e-99 Identities = 330/378 (87%) Strand = Plus / Minus Query: 217 ctggagaacatccatgacagaaccaaagtcaggcttcacactgatgggtggattggcata 276 ||||||||||||||| |||||||||||||||| |||||||||||| |||||||| ||||| Sbjct: 1618 ctggagaacatccatcacagaaccaaagtcagccttcacactgatcggtggattagcata 1559 Query: 277 ctggcacaacatgtccttgatgttcttatcgtggtagtcgatctttgattgtgtgaactt 336 |||||| | |||||| |||||| | || || |||||||| |||||||| || |||||||| Sbjct: 1558 ctggcaaaccatgtctttgatggttttgtcatggtagtcaatctttgactgcgtgaactt 1499 Query: 337 tagcccgtgtgctgtactaacaaccaccgtgcggtcgttagtgccaattataccctggtc 396 ||||| || ||||| ||||||||||| |||||||| |||| ||||||||||| ||| | Sbjct: 1498 cagcccatgagctgtgctaacaaccacagtgcggtcattagggccaattatacgctgacc 1439 Query: 397 gcgcagcttgaacagagcagcaagtgcaaccccagtgtgtgggcaggcgaacatcccagt 456 | ||||| |||| ||||||||||||||||||||| |||||||| || ||||||||||| Sbjct: 1438 ctgaagcttaaacaaagcagcaagtgcaaccccagtatgtgggcaagcaaacatcccagt 1379 Query: 457 gaggtcagcaagcgccgtcgcatccatgagttcctcctctgtagcttcctcgacaatacc 516 | |||||||||||||||| |||||||| || |||||||||||||| ||||| |||||||| Sbjct: 1378 gcggtcagcaagcgccgttgcatccattagctcctcctctgtagcctcctccacaatacc 1319 Query: 517 atcagttgccttcagtgcaacaaccgctcggtcaatagacactggatcaccaatctgtat 576 ||||| |||||||| || || ||||| ||||||| ||| || ||||||||||||||||| Sbjct: 1318 gtcagtggccttcagcgcgaccaccgcacggtcaacagatacaggatcaccaatctgtat 1259 Query: 577 ggcagatgcaaatgtagt 594 ||||||||||||||||| Sbjct: 1258 cgcagatgcaaatgtagt 1241 Score = 44.1 bits (22), Expect = 0.60 Identities = 32/34 (94%), Gaps = 1/34 (2%) Strand = Plus / Minus Query: 26 acagatgaagtacaaggaa-agctctatccactt 58 |||||| |||||||||||| |||||||||||||| Sbjct: 1841 acagataaagtacaaggaacagctctatccactt 1808
>ref|XM_475849.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1566 Score = 149 bits (75), Expect = 1e-32 Identities = 387/491 (78%) Strand = Plus / Minus Query: 193 tcagatcttaccattgagcttcttctggagaacatccatgacagaaccaaagtcaggctt 252 ||||| |||||| |||||| |||||| ||| ||||||||||| | ||| ||||||| ||| Sbjct: 1566 tcagagcttacccttgagcctcttcttgaggacatccatgacggcaccgaagtcagcctt 1507 Query: 253 cacactgatgggtggattggcatactggcacaacatgtccttgatgttcttatcgtggta 312 ||| |||| || ||||| ||||||| ||| |||||| | ||| || | || ||||| Sbjct: 1506 cacgctgaccgggggattcgcatacttgcaggccatgtcttcgatcttgctgtcatggta 1447 Query: 313 gtcgatctttgattgtgtgaactttagcccgtgtgctgtactaacaaccaccgtgcggtc 372 ||||||||| || |||| |||||| || || || ||||| || || || ||||||||||| Sbjct: 1446 gtcgatcttggactgtgagaacttcagaccatgagctgtgctgacgactaccgtgcggtc 1387 Query: 373 gttagtgccaattataccctggtcgcgcagcttgaacagagcagcaagtgcaaccccagt 432 || | || || || | |||||| || ||||||||||| || || || ||||||||||| Sbjct: 1386 atttggcccgatgatgcgctggtcacggagcttgaacagtgctgcgagggcaaccccagt 1327 Query: 433 gtgtgggcaggcgaacatcccagtgaggtcagcaagcgccgtcgcatccatgagttcctc 492 || ||||| || ||||| |||||| | ||||| |||| | | || | |||||||||||| Sbjct: 1326 atgcgggcaagcaaacatgccagtgcgatcagcgagcgacattgcgttcatgagttcctc 1267 Query: 493 ctctgtagcttcctcgacaataccatcagttgccttcagtgcaacaaccgctcggtcaat 552 ||| || || |||||||| || |||||||||||||| || ||||| ||||| || || | Sbjct: 1266 ctccgtggcctcctcgacgatgccatcagttgccttgagcgcaaccaccgcgcgatcgac 1207 Query: 553 agacactggatcaccaatctgtatggcagatgcaaatgtagttccagcaacaagtgactg 612 ||| || || ||||||||||| || || ||||||||||| | |||| || | | | Sbjct: 1206 agataccgggtcaccaatctgaattgccgatgcaaatgtcggctcagccacctgcggcgt 1147 Query: 613 gaagtcagtatacccagacttgtaataccggtacagtgggtttgcgttggcggcctgtgc 672 ||| ||||| |||| |||||||| ||||||||||| ||||| || ||||| ||||| || Sbjct: 1146 gaactcagtccaccccgacttgtagtaccggtacagcgggttcgcattggcagcctgcgc 1087 Query: 673 acatacaagcc 683 || ||||||| Sbjct: 1086 gcagacaagcc 1076
>gb|AC135925.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0560C03, complete sequence Length = 177861 Score = 149 bits (75), Expect = 1e-32 Identities = 387/491 (78%) Strand = Plus / Minus Query: 193 tcagatcttaccattgagcttcttctggagaacatccatgacagaaccaaagtcaggctt 252 ||||| |||||| |||||| |||||| ||| ||||||||||| | ||| ||||||| ||| Sbjct: 3293 tcagagcttacccttgagcctcttcttgaggacatccatgacggcaccgaagtcagcctt 3234 Query: 253 cacactgatgggtggattggcatactggcacaacatgtccttgatgttcttatcgtggta 312 ||| |||| || ||||| ||||||| ||| |||||| | ||| || | || ||||| Sbjct: 3233 cacgctgaccgggggattcgcatacttgcaggccatgtcttcgatcttgctgtcatggta 3174 Query: 313 gtcgatctttgattgtgtgaactttagcccgtgtgctgtactaacaaccaccgtgcggtc 372 ||||||||| || |||| |||||| || || || ||||| || || || ||||||||||| Sbjct: 3173 gtcgatcttggactgtgagaacttcagaccatgagctgtgctgacgactaccgtgcggtc 3114 Query: 373 gttagtgccaattataccctggtcgcgcagcttgaacagagcagcaagtgcaaccccagt 432 || | || || || | |||||| || ||||||||||| || || || ||||||||||| Sbjct: 3113 atttggcccgatgatgcgctggtcacggagcttgaacagtgctgcgagggcaaccccagt 3054 Query: 433 gtgtgggcaggcgaacatcccagtgaggtcagcaagcgccgtcgcatccatgagttcctc 492 || ||||| || ||||| |||||| | ||||| |||| | | || | |||||||||||| Sbjct: 3053 atgcgggcaagcaaacatgccagtgcgatcagcgagcgacattgcgttcatgagttcctc 2994 Query: 493 ctctgtagcttcctcgacaataccatcagttgccttcagtgcaacaaccgctcggtcaat 552 ||| || || |||||||| || |||||||||||||| || ||||| ||||| || || | Sbjct: 2993 ctccgtggcctcctcgacgatgccatcagttgccttgagcgcaaccaccgcgcgatcgac 2934 Query: 553 agacactggatcaccaatctgtatggcagatgcaaatgtagttccagcaacaagtgactg 612 ||| || || ||||||||||| || || ||||||||||| | |||| || | | | Sbjct: 2933 agataccgggtcaccaatctgaattgccgatgcaaatgtcggctcagccacctgcggcgt 2874 Query: 613 gaagtcagtatacccagacttgtaataccggtacagtgggtttgcgttggcggcctgtgc 672 ||| ||||| |||| |||||||| ||||||||||| ||||| || ||||| ||||| || Sbjct: 2873 gaactcagtccaccccgacttgtagtaccggtacagcgggttcgcattggcagcctgcgc 2814 Query: 673 acatacaagcc 683 || ||||||| Sbjct: 2813 gcagacaagcc 2803
>gb|AC130725.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0494H05, complete sequence Length = 141715 Score = 149 bits (75), Expect = 1e-32 Identities = 387/491 (78%) Strand = Plus / Minus Query: 193 tcagatcttaccattgagcttcttctggagaacatccatgacagaaccaaagtcaggctt 252 ||||| |||||| |||||| |||||| ||| ||||||||||| | ||| ||||||| ||| Sbjct: 78478 tcagagcttacccttgagcctcttcttgaggacatccatgacggcaccgaagtcagcctt 78419 Query: 253 cacactgatgggtggattggcatactggcacaacatgtccttgatgttcttatcgtggta 312 ||| |||| || ||||| ||||||| ||| |||||| | ||| || | || ||||| Sbjct: 78418 cacgctgaccgggggattcgcatacttgcaggccatgtcttcgatcttgctgtcatggta 78359 Query: 313 gtcgatctttgattgtgtgaactttagcccgtgtgctgtactaacaaccaccgtgcggtc 372 ||||||||| || |||| |||||| || || || ||||| || || || ||||||||||| Sbjct: 78358 gtcgatcttggactgtgagaacttcagaccatgagctgtgctgacgactaccgtgcggtc 78299 Query: 373 gttagtgccaattataccctggtcgcgcagcttgaacagagcagcaagtgcaaccccagt 432 || | || || || | |||||| || ||||||||||| || || || ||||||||||| Sbjct: 78298 atttggcccgatgatgcgctggtcacggagcttgaacagtgctgcgagggcaaccccagt 78239 Query: 433 gtgtgggcaggcgaacatcccagtgaggtcagcaagcgccgtcgcatccatgagttcctc 492 || ||||| || ||||| |||||| | ||||| |||| | | || | |||||||||||| Sbjct: 78238 atgcgggcaagcaaacatgccagtgcgatcagcgagcgacattgcgttcatgagttcctc 78179 Query: 493 ctctgtagcttcctcgacaataccatcagttgccttcagtgcaacaaccgctcggtcaat 552 ||| || || |||||||| || |||||||||||||| || ||||| ||||| || || | Sbjct: 78178 ctccgtggcctcctcgacgatgccatcagttgccttgagcgcaaccaccgcgcgatcgac 78119 Query: 553 agacactggatcaccaatctgtatggcagatgcaaatgtagttccagcaacaagtgactg 612 ||| || || ||||||||||| || || ||||||||||| | |||| || | | | Sbjct: 78118 agataccgggtcaccaatctgaattgccgatgcaaatgtcggctcagccacctgcggcgt 78059 Query: 613 gaagtcagtatacccagacttgtaataccggtacagtgggtttgcgttggcggcctgtgc 672 ||| ||||| |||| |||||||| ||||||||||| ||||| || ||||| ||||| || Sbjct: 78058 gaactcagtccaccccgacttgtagtaccggtacagcgggttcgcattggcagcctgcgc 77999 Query: 673 acatacaagcc 683 || ||||||| Sbjct: 77998 gcagacaagcc 77988
>gb|AC136492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0554F08, complete sequence Length = 166218 Score = 149 bits (75), Expect = 1e-32 Identities = 387/491 (78%) Strand = Plus / Minus Query: 193 tcagatcttaccattgagcttcttctggagaacatccatgacagaaccaaagtcaggctt 252 ||||| |||||| |||||| |||||| ||| ||||||||||| | ||| ||||||| ||| Sbjct: 102981 tcagagcttacccttgagcctcttcttgaggacatccatgacggcaccgaagtcagcctt 102922 Query: 253 cacactgatgggtggattggcatactggcacaacatgtccttgatgttcttatcgtggta 312 ||| |||| || ||||| ||||||| ||| |||||| | ||| || | || ||||| Sbjct: 102921 cacgctgaccgggggattcgcatacttgcaggccatgtcttcgatcttgctgtcatggta 102862 Query: 313 gtcgatctttgattgtgtgaactttagcccgtgtgctgtactaacaaccaccgtgcggtc 372 ||||||||| || |||| |||||| || || || ||||| || || || ||||||||||| Sbjct: 102861 gtcgatcttggactgtgagaacttcagaccatgagctgtgctgacgactaccgtgcggtc 102802 Query: 373 gttagtgccaattataccctggtcgcgcagcttgaacagagcagcaagtgcaaccccagt 432 || | || || || | |||||| || ||||||||||| || || || ||||||||||| Sbjct: 102801 atttggcccgatgatgcgctggtcacggagcttgaacagtgctgcgagggcaaccccagt 102742 Query: 433 gtgtgggcaggcgaacatcccagtgaggtcagcaagcgccgtcgcatccatgagttcctc 492 || ||||| || ||||| |||||| | ||||| |||| | | || | |||||||||||| Sbjct: 102741 atgcgggcaagcaaacatgccagtgcgatcagcgagcgacattgcgttcatgagttcctc 102682 Query: 493 ctctgtagcttcctcgacaataccatcagttgccttcagtgcaacaaccgctcggtcaat 552 ||| || || |||||||| || |||||||||||||| || ||||| ||||| || || | Sbjct: 102681 ctccgtggcctcctcgacgatgccatcagttgccttgagcgcaaccaccgcgcgatcgac 102622 Query: 553 agacactggatcaccaatctgtatggcagatgcaaatgtagttccagcaacaagtgactg 612 ||| || || ||||||||||| || || ||||||||||| | |||| || | | | Sbjct: 102621 agataccgggtcaccaatctgaattgccgatgcaaatgtcggctcagccacctgcggcgt 102562 Query: 613 gaagtcagtatacccagacttgtaataccggtacagtgggtttgcgttggcggcctgtgc 672 ||| ||||| |||| |||||||| ||||||||||| ||||| || ||||| ||||| || Sbjct: 102561 gaactcagtccaccccgacttgtagtaccggtacagcgggttcgcattggcagcctgcgc 102502 Query: 673 acatacaagcc 683 || ||||||| Sbjct: 102501 gcagacaagcc 102491
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 149 bits (75), Expect = 1e-32 Identities = 387/491 (78%) Strand = Plus / Minus Query: 193 tcagatcttaccattgagcttcttctggagaacatccatgacagaaccaaagtcaggctt 252 ||||| |||||| |||||| |||||| ||| ||||||||||| | ||| ||||||| ||| Sbjct: 27071897 tcagagcttacccttgagcctcttcttgaggacatccatgacggcaccgaagtcagcctt 27071838 Query: 253 cacactgatgggtggattggcatactggcacaacatgtccttgatgttcttatcgtggta 312 ||| |||| || ||||| ||||||| ||| |||||| | ||| || | || ||||| Sbjct: 27071837 cacgctgaccgggggattcgcatacttgcaggccatgtcttcgatcttgctgtcatggta 27071778 Query: 313 gtcgatctttgattgtgtgaactttagcccgtgtgctgtactaacaaccaccgtgcggtc 372 ||||||||| || |||| |||||| || || || ||||| || || || ||||||||||| Sbjct: 27071777 gtcgatcttggactgtgagaacttcagaccatgagctgtgctgacgactaccgtgcggtc 27071718 Query: 373 gttagtgccaattataccctggtcgcgcagcttgaacagagcagcaagtgcaaccccagt 432 || | || || || | |||||| || ||||||||||| || || || ||||||||||| Sbjct: 27071717 atttggcccgatgatgcgctggtcacggagcttgaacagtgctgcgagggcaaccccagt 27071658 Query: 433 gtgtgggcaggcgaacatcccagtgaggtcagcaagcgccgtcgcatccatgagttcctc 492 || ||||| || ||||| |||||| | ||||| |||| | | || | |||||||||||| Sbjct: 27071657 atgcgggcaagcaaacatgccagtgcgatcagcgagcgacattgcgttcatgagttcctc 27071598 Query: 493 ctctgtagcttcctcgacaataccatcagttgccttcagtgcaacaaccgctcggtcaat 552 ||| || || |||||||| || |||||||||||||| || ||||| ||||| || || | Sbjct: 27071597 ctccgtggcctcctcgacgatgccatcagttgccttgagcgcaaccaccgcgcgatcgac 27071538 Query: 553 agacactggatcaccaatctgtatggcagatgcaaatgtagttccagcaacaagtgactg 612 ||| || || ||||||||||| || || ||||||||||| | |||| || | | | Sbjct: 27071537 agataccgggtcaccaatctgaattgccgatgcaaatgtcggctcagccacctgcggcgt 27071478 Query: 613 gaagtcagtatacccagacttgtaataccggtacagtgggtttgcgttggcggcctgtgc 672 ||| ||||| |||| |||||||| ||||||||||| ||||| || ||||| ||||| || Sbjct: 27071477 gaactcagtccaccccgacttgtagtaccggtacagcgggttcgcattggcagcctgcgc 27071418 Query: 673 acatacaagcc 683 || ||||||| Sbjct: 27071417 gcagacaagcc 27071407
>dbj|AK109478.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-F04, full insert sequence Length = 1876 Score = 149 bits (75), Expect = 1e-32 Identities = 387/491 (78%) Strand = Plus / Minus Query: 193 tcagatcttaccattgagcttcttctggagaacatccatgacagaaccaaagtcaggctt 252 ||||| |||||| |||||| |||||| ||| ||||||||||| | ||| ||||||| ||| Sbjct: 1616 tcagagcttacccttgagcctcttcttgaggacatccatgacggcaccgaagtcagcctt 1557 Query: 253 cacactgatgggtggattggcatactggcacaacatgtccttgatgttcttatcgtggta 312 ||| |||| || ||||| ||||||| ||| |||||| | ||| || | || ||||| Sbjct: 1556 cacgctgaccgggggattcgcatacttgcaggccatgtcttcgatcttgctgtcatggta 1497 Query: 313 gtcgatctttgattgtgtgaactttagcccgtgtgctgtactaacaaccaccgtgcggtc 372 ||||||||| || |||| |||||| || || || ||||| || || || ||||||||||| Sbjct: 1496 gtcgatcttggactgtgagaacttcagaccatgagctgtgctgacgactaccgtgcggtc 1437 Query: 373 gttagtgccaattataccctggtcgcgcagcttgaacagagcagcaagtgcaaccccagt 432 || | || || || | |||||| || ||||||||||| || || || ||||||||||| Sbjct: 1436 atttggcccgatgatgcgctggtcacggagcttgaacagtgctgcgagggcaaccccagt 1377 Query: 433 gtgtgggcaggcgaacatcccagtgaggtcagcaagcgccgtcgcatccatgagttcctc 492 || ||||| || ||||| |||||| | ||||| |||| | | || | |||||||||||| Sbjct: 1376 atgcgggcaagcaaacatgccagtgcgatcagcgagcgacattgcgttcatgagttcctc 1317 Query: 493 ctctgtagcttcctcgacaataccatcagttgccttcagtgcaacaaccgctcggtcaat 552 ||| || || |||||||| || |||||||||||||| || ||||| ||||| || || | Sbjct: 1316 ctccgtggcctcctcgacgatgccatcagttgccttgagcgcaaccaccgcgcgatcgac 1257 Query: 553 agacactggatcaccaatctgtatggcagatgcaaatgtagttccagcaacaagtgactg 612 ||| || || ||||||||||| || || ||||||||||| | |||| || | | | Sbjct: 1256 agataccgggtcaccaatctgaattgccgatgcaaatgtcggctcagccacctgcggcgt 1197 Query: 613 gaagtcagtatacccagacttgtaataccggtacagtgggtttgcgttggcggcctgtgc 672 ||| ||||| |||| |||||||| ||||||||||| ||||| || ||||| ||||| || Sbjct: 1196 gaactcagtccaccccgacttgtagtaccggtacagcgggttcgcattggcagcctgcgc 1137 Query: 673 acatacaagcc 683 || ||||||| Sbjct: 1136 gcagacaagcc 1126
>dbj|AK101669.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033058D04, full insert sequence Length = 1938 Score = 149 bits (75), Expect = 1e-32 Identities = 387/491 (78%) Strand = Plus / Minus Query: 193 tcagatcttaccattgagcttcttctggagaacatccatgacagaaccaaagtcaggctt 252 ||||| |||||| |||||| |||||| ||| ||||||||||| | ||| ||||||| ||| Sbjct: 1665 tcagagcttacccttgagcctcttcttgaggacatccatgacggcaccgaagtcagcctt 1606 Query: 253 cacactgatgggtggattggcatactggcacaacatgtccttgatgttcttatcgtggta 312 ||| |||| || ||||| ||||||| ||| |||||| | ||| || | || ||||| Sbjct: 1605 cacgctgaccgggggattcgcatacttgcaggccatgtcttcgatcttgctgtcatggta 1546 Query: 313 gtcgatctttgattgtgtgaactttagcccgtgtgctgtactaacaaccaccgtgcggtc 372 ||||||||| || |||| |||||| || || || ||||| || || || ||||||||||| Sbjct: 1545 gtcgatcttggactgtgagaacttcagaccatgagctgtgctgacgactaccgtgcggtc 1486 Query: 373 gttagtgccaattataccctggtcgcgcagcttgaacagagcagcaagtgcaaccccagt 432 || | || || || | |||||| || ||||||||||| || || || ||||||||||| Sbjct: 1485 atttggcccgatgatgcgctggtcacggagcttgaacagtgctgcgagggcaaccccagt 1426 Query: 433 gtgtgggcaggcgaacatcccagtgaggtcagcaagcgccgtcgcatccatgagttcctc 492 || ||||| || ||||| |||||| | ||||| |||| | | || | |||||||||||| Sbjct: 1425 atgcgggcaagcaaacatgccagtgcgatcagcgagcgacattgcgttcatgagttcctc 1366 Query: 493 ctctgtagcttcctcgacaataccatcagttgccttcagtgcaacaaccgctcggtcaat 552 ||| || || |||||||| || |||||||||||||| || ||||| ||||| || || | Sbjct: 1365 ctccgtggcctcctcgacgatgccatcagttgccttgagcgcaaccaccgcgcgatcgac 1306 Query: 553 agacactggatcaccaatctgtatggcagatgcaaatgtagttccagcaacaagtgactg 612 ||| || || ||||||||||| || || ||||||||||| | |||| || | | | Sbjct: 1305 agataccgggtcaccaatctgaattgccgatgcaaatgtcggctcagccacctgcggcgt 1246 Query: 613 gaagtcagtatacccagacttgtaataccggtacagtgggtttgcgttggcggcctgtgc 672 ||| ||||| |||| |||||||| ||||||||||| ||||| || ||||| ||||| || Sbjct: 1245 gaactcagtccaccccgacttgtagtaccggtacagcgggttcgcattggcagcctgcgc 1186 Query: 673 acatacaagcc 683 || ||||||| Sbjct: 1185 gcagacaagcc 1175
>gb|BT013335.1| Lycopersicon esculentum clone 135123R, mRNA sequence Length = 1742 Score = 69.9 bits (35), Expect = 1e-08 Identities = 53/59 (89%) Strand = Plus / Minus Query: 533 gcaacaaccgctcggtcaatagacactggatcaccaatctgtatggcagatgcaaatgt 591 |||| ||| |||| ||| ||||||||||| |||||||||||||| |||||||||||||| Sbjct: 1220 gcaaaaacagctctgtctatagacactgggtcaccaatctgtatagcagatgcaaatgt 1162
>gb|BT016678.1| Zea mays clone Contig511 mRNA sequence Length = 1283 Score = 67.9 bits (34), Expect = 4e-08 Identities = 163/206 (79%) Strand = Plus / Minus Query: 308 tggtagtcgatctttgattgtgtgaactttagcccgtgtgctgtactaacaaccaccgtg 367 |||||||||||||| || || | |||||| || ||||| || || || || ||||| ||| Sbjct: 912 tggtagtcgatcttcgactgcgagaacttgaggccgtgagccgtgctgacgaccacggtg 853 Query: 368 cggtcgttagtgccaattataccctggtcgcgcagcttgaacagagcagcaagtgcaacc 427 |||||||| || || || | | |||||| | ||||||||||| || || || || ||| Sbjct: 852 cggtcgttcgtcccgatgacgcgctggtccctgagcttgaacagggcggcgagcgcgacc 793 Query: 428 ccagtgtgtgggcaggcgaacatcccagtgaggtcagcaagcgccgtcgcatccatgagt 487 || ||||| ||||| ||||||||||| ||| |||| || |||| | |||| | |||||| Sbjct: 792 ccggtgtgcgggcaagcgaacatccccgtgcggtcggcgagcgacatcgcgttcatgagc 733 Query: 488 tcctcctctgtagcttcctcgacaat 513 || ||||| || || ||||||||||| Sbjct: 732 tcttcctccgtcgcctcctcgacaat 707
>gb|AC146308.2| Medicago truncatula clone mth2-10a12, complete sequence Length = 112733 Score = 63.9 bits (32), Expect = 6e-07 Identities = 101/122 (82%), Gaps = 4/122 (3%) Strand = Plus / Minus Query: 476 gcatccatgagttcctcctctgtagcttcctcgacaataccat--cagttgccttcagtg 533 |||||||| | ||||||||| ||||||||||| ||||| |||| ||||| ||||| | Sbjct: 84630 gcatccatcaattcctcctcagtagcttcctcaacaatcccattgcagtt--cttcaaag 84573 Query: 534 caacaaccgctcggtcaatagacactggatcaccaatctgtatggcagatgcaaatgtag 593 || ||| |||| |||||||| || |||||||| |||||||| ||||||||||| |||| Sbjct: 84572 catgaacagctctatcaatagaaaccggatcaccgatctgtatagcagatgcaaaagtag 84513 Query: 594 tt 595 || Sbjct: 84512 tt 84511
>gb|AC137554.15| Medicago truncatula clone mth2-17j18, complete sequence Length = 121248 Score = 63.9 bits (32), Expect = 6e-07 Identities = 101/122 (82%), Gaps = 4/122 (3%) Strand = Plus / Plus Query: 476 gcatccatgagttcctcctctgtagcttcctcgacaataccat--cagttgccttcagtg 533 |||||||| | ||||||||| ||||||||||| ||||| |||| ||||| ||||| | Sbjct: 85450 gcatccatcaattcctcctcagtagcttcctcaacaatcccattgcagtt--cttcaaag 85507 Query: 534 caacaaccgctcggtcaatagacactggatcaccaatctgtatggcagatgcaaatgtag 593 || ||| |||| |||||||| || |||||||| |||||||| ||||||||||| |||| Sbjct: 85508 catgaacagctctatcaatagaaaccggatcaccgatctgtatagcagatgcaaaagtag 85567 Query: 594 tt 595 || Sbjct: 85568 tt 85569
>gb|AF082894.1|AF082894 Solanum tuberosum threonine synthase (TS) mRNA, complete cds; chloroplast gene for chloroplast product Length = 1707 Score = 61.9 bits (31), Expect = 3e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 533 gcaacaaccgctcggtcaatagacactggatcaccaatctgtatggcagatgcaaatgt 591 |||| ||| |||| ||| |||||||| ||||||||||||||||| ||||| |||||||| Sbjct: 1225 gcaaaaacagctctgtctatagacaccggatcaccaatctgtatagcagacgcaaatgt 1167
>gb|AY560919.1| Medicago sativa chloroplast threonine synthase (TS) mRNA, partial cds; nuclear gene for chloroplast product Length = 917 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 560 ggatcaccaatctgtatggcagatgcaaatgtagt 594 ||||||||||||||||| ||||||||||| ||||| Sbjct: 783 ggatcaccaatctgtatagcagatgcaaaagtagt 749
>ref|NM_119130.2| Arabidopsis thaliana MTO2 (METHIONINE OVER-ACCUMULATOR); threonine synthase AT4G29840 (MTO2) transcript variant AT4G29840.1 mRNA, complete cds Length = 2751 Score = 50.1 bits (25), Expect = 0.010 Identities = 40/45 (88%) Strand = Plus / Minus Query: 474 tcgcatccatgagttcctcctctgtagcttcctcgacaataccat 518 |||||||||| || ||||||||||| ||||| || |||||||||| Sbjct: 1332 tcgcatccatcagctcctcctctgtggcttcttctacaataccat 1288
>ref|NM_202908.1| Arabidopsis thaliana MTO2 (METHIONINE OVER-ACCUMULATOR); threonine synthase AT4G29840 (MTO2) transcript variant AT4G29840.2 mRNA, complete cds Length = 2510 Score = 50.1 bits (25), Expect = 0.010 Identities = 40/45 (88%) Strand = Plus / Minus Query: 474 tcgcatccatgagttcctcctctgtagcttcctcgacaataccat 518 |||||||||| || ||||||||||| ||||| || |||||||||| Sbjct: 1332 tcgcatccatcagctcctcctctgtggcttcttctacaataccat 1288
>emb|AL161575.2|ATCHRIV71 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 71 Length = 200001 Score = 50.1 bits (25), Expect = 0.010 Identities = 40/45 (88%) Strand = Plus / Plus Query: 474 tcgcatccatgagttcctcctctgtagcttcctcgacaataccat 518 |||||||||| || ||||||||||| ||||| || |||||||||| Sbjct: 134375 tcgcatccatcagctcctcctctgtggcttcttctacaataccat 134419
>emb|AL050352.1|ATF27B13 Arabidopsis thaliana DNA chromosome 4, BAC clone F27B13 (ESSA project) Length = 98401 Score = 50.1 bits (25), Expect = 0.010 Identities = 40/45 (88%) Strand = Plus / Plus Query: 474 tcgcatccatgagttcctcctctgtagcttcctcgacaataccat 518 |||||||||| || ||||||||||| ||||| || |||||||||| Sbjct: 24302 tcgcatccatcagctcctcctctgtggcttcttctacaataccat 24346
>gb|L41666.1|ATHTHSY Arabidopsis thaliana threonine synthase mRNA, 3' end of cds Length = 1717 Score = 50.1 bits (25), Expect = 0.010 Identities = 40/45 (88%) Strand = Plus / Minus Query: 474 tcgcatccatgagttcctcctctgtagcttcctcgacaataccat 518 |||||||||| || ||||||||||| ||||| || |||||||||| Sbjct: 1288 tcgcatccatcagctcctcctctgtggcttcttctacaataccat 1244
>dbj|AB027151.1| Arabidopsis thaliana gene for threonine synthase, complete cds Length = 2233 Score = 50.1 bits (25), Expect = 0.010 Identities = 40/45 (88%) Strand = Plus / Minus Query: 474 tcgcatccatgagttcctcctctgtagcttcctcgacaataccat 518 |||||||||| || ||||||||||| ||||| || |||||||||| Sbjct: 1804 tcgcatccatcagctcctcctctgtggcttcttctacaataccat 1760
>emb|AJ311934.1|MTR311934 Medicago truncatula genomic DNA, N4-1 locus Length = 1467 Score = 48.1 bits (24), Expect = 0.038 Identities = 102/128 (79%) Strand = Plus / Plus Query: 461 tcagcaagcgccgtcgcatccatgagttcctcctctgtagcttcctcgacaataccatca 520 |||||||| ||| | |||||||| | |||||| || |||||||||| ||||| |||||| Sbjct: 1316 tcagcaagtgccattgcatccatcaattcctcttcactagcttcctcaacaatcccatca 1375 Query: 521 gttgccttcagtgcaacaaccgctcggtcaatagacactggatcaccaatctgtatggca 580 | |||||| |||| ||| |||| ||||| || || ||||||||||| || || ||| Sbjct: 1376 gaatccttcaatgcataaacagctctatcaattgaaacaggatcaccaatttgaatagca 1435 Query: 581 gatgcaaa 588 || ||||| Sbjct: 1436 gaagcaaa 1443
>ref|NM_105939.3| Arabidopsis thaliana catalytic/ threonine synthase AT1G72810 mRNA, complete cds Length = 1744 Score = 44.1 bits (22), Expect = 0.60 Identities = 106/134 (79%) Strand = Plus / Minus Query: 461 tcagcaagcgccgtcgcatccatgagttcctcctctgtagcttcctcgacaataccatca 520 |||||||| || || |||||||| | || ||||||||||||||||| ||||| |||| | Sbjct: 1304 tcagcaagagctgttgcatccatcaactcttcctctgtagcttcctcaacaatcccatta 1245 Query: 521 gttgccttcagtgcaacaaccgctcggtcaatagacactggatcaccaatctgtatggca 580 | | ||||| ||| || |||| ||||| || || || ||||||||||| || ||| Sbjct: 1244 gatttcttcaacgcatacacagctctatcaatcgaaacagggtcaccaatctgaatagca 1185 Query: 581 gatgcaaatgtagt 594 || ||||||||||| Sbjct: 1184 gaagcaaatgtagt 1171
>ref|XM_633753.1| Dictyostelium discoideum protein phosphatase 2A 55 kDa regulatory B subunit (DDB0191428), partial mRNA Length = 1452 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 579 cagatgcaaatgtagttccagc 600 |||||||||||||||||||||| Sbjct: 65 cagatgcaaatgtagttccagc 86
>gb|AY099629.1| Arabidopsis thaliana threonine synthase, putative (At1g72810) mRNA, complete cds Length = 1701 Score = 44.1 bits (22), Expect = 0.60 Identities = 106/134 (79%) Strand = Plus / Minus Query: 461 tcagcaagcgccgtcgcatccatgagttcctcctctgtagcttcctcgacaataccatca 520 |||||||| || || |||||||| | || ||||||||||||||||| ||||| |||| | Sbjct: 1304 tcagcaagagctgttgcatccatcaactcttcctctgtagcttcctcaacaatcccatta 1245 Query: 521 gttgccttcagtgcaacaaccgctcggtcaatagacactggatcaccaatctgtatggca 580 | | ||||| ||| || |||| ||||| || || || ||||||||||| || ||| Sbjct: 1244 gatttcttcaacgcatacacagctctatcaatcgaaacagggtcaccaatctgaatagca 1185 Query: 581 gatgcaaatgtagt 594 || ||||||||||| Sbjct: 1184 gaagcaaatgtagt 1171
>gb|AC010926.12|AC010926 Arabidopsis thaliana chromosome 1 BAC F28P22 genomic sequence, complete sequence Length = 101105 Score = 44.1 bits (22), Expect = 0.60 Identities = 106/134 (79%) Strand = Plus / Minus Query: 461 tcagcaagcgccgtcgcatccatgagttcctcctctgtagcttcctcgacaataccatca 520 |||||||| || || |||||||| | || ||||||||||||||||| ||||| |||| | Sbjct: 11486 tcagcaagagctgttgcatccatcaactcttcctctgtagcttcctcaacaatcccatta 11427 Query: 521 gttgccttcagtgcaacaaccgctcggtcaatagacactggatcaccaatctgtatggca 580 | | ||||| ||| || |||| ||||| || || || ||||||||||| || ||| Sbjct: 11426 gatttcttcaacgcatacacagctctatcaatcgaaacagggtcaccaatctgaatagca 11367 Query: 581 gatgcaaatgtagt 594 || ||||||||||| Sbjct: 11366 gaagcaaatgtagt 11353
>gb|BT002151.1| Arabidopsis thaliana threonine synthase, putative (At1g72810) mRNA, complete cds Length = 1671 Score = 44.1 bits (22), Expect = 0.60 Identities = 106/134 (79%) Strand = Plus / Minus Query: 461 tcagcaagcgccgtcgcatccatgagttcctcctctgtagcttcctcgacaataccatca 520 |||||||| || || |||||||| | || ||||||||||||||||| ||||| |||| | Sbjct: 1280 tcagcaagagctgttgcatccatcaactcttcctctgtagcttcctcaacaatcccatta 1221 Query: 521 gttgccttcagtgcaacaaccgctcggtcaatagacactggatcaccaatctgtatggca 580 | | ||||| ||| || |||| ||||| || || || ||||||||||| || ||| Sbjct: 1220 gatttcttcaacgcatacacagctctatcaatcgaaacagggtcaccaatctgaatagca 1161 Query: 581 gatgcaaatgtagt 594 || ||||||||||| Sbjct: 1160 gaagcaaatgtagt 1147
>gb|AC008017.2|AC008017 Arabidopsis thaliana chromosome I BAC F3N23 genomic sequence, complete sequence Length = 116944 Score = 44.1 bits (22), Expect = 0.60 Identities = 106/134 (79%) Strand = Plus / Plus Query: 461 tcagcaagcgccgtcgcatccatgagttcctcctctgtagcttcctcgacaataccatca 520 |||||||| || || |||||||| | || ||||||||||||||||| ||||| |||| | Sbjct: 1604 tcagcaagagctgttgcatccatcaactcttcctctgtagcttcctcaacaatcccatta 1663 Query: 521 gttgccttcagtgcaacaaccgctcggtcaatagacactggatcaccaatctgtatggca 580 | | ||||| ||| || |||| ||||| || || || ||||||||||| || ||| Sbjct: 1664 gatttcttcaacgcatacacagctctatcaatcgaaacagggtcaccaatctgaatagca 1723 Query: 581 gatgcaaatgtagt 594 || ||||||||||| Sbjct: 1724 gaagcaaatgtagt 1737
>ref|NM_125094.2| Arabidopsis thaliana unknown protein AT5G57120 mRNA, complete cds Length = 1333 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 488 tcctcctctgtagcttcctcg 508 ||||||||||||||||||||| Sbjct: 1049 tcctcctctgtagcttcctcg 1029
>ref|XM_631404.1| Dictyostelium discoideum hypothetical protein (DDB0219392), partial mRNA Length = 1410 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 5 ttattattgatattacatgat 25 ||||||||||||||||||||| Sbjct: 67 ttattattgatattacatgat 87
>gb|BC070603.1| Xenopus laevis cDNA clone MGC:81253 IMAGE:6631223, complete cds Length = 4103 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 488 tcctcctctgtagcttcctcg 508 ||||||||||||||||||||| Sbjct: 2915 tcctcctctgtagcttcctcg 2895
>gb|AY127952.1| Arabidopsis thaliana AT5g57120/MUL3_6 mRNA, complete cds Length = 993 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 488 tcctcctctgtagcttcctcg 508 ||||||||||||||||||||| Sbjct: 936 tcctcctctgtagcttcctcg 916
>gb|AY056089.1| Arabidopsis thaliana AT5g57120/MUL3_6 mRNA, complete cds Length = 549 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 488 tcctcctctgtagcttcctcg 508 ||||||||||||||||||||| Sbjct: 492 tcctcctctgtagcttcctcg 472
>gb|AY045686.1| Arabidopsis thaliana AT5g57120/MUL3_6 mRNA, complete cds Length = 1258 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 488 tcctcctctgtagcttcctcg 508 ||||||||||||||||||||| Sbjct: 1045 tcctcctctgtagcttcctcg 1025
>gb|AY037212.1| Arabidopsis thaliana AT5g57120/MUL3_6 mRNA, complete cds Length = 1279 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 488 tcctcctctgtagcttcctcg 508 ||||||||||||||||||||| Sbjct: 1044 tcctcctctgtagcttcctcg 1024
>dbj|AK037230.1| Mus musculus 6 days neonate skin cDNA, RIKEN full-length enriched library, clone:A030012A03 product:unclassifiable, full insert sequence Length = 2795 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 417 caagtgcaaccccagtgtgtg 437 ||||||||||||||||||||| Sbjct: 2492 caagtgcaaccccagtgtgtg 2512
>gb|AY084589.1| Arabidopsis thaliana clone 11265 mRNA, complete sequence Length = 1258 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 488 tcctcctctgtagcttcctcg 508 ||||||||||||||||||||| Sbjct: 1049 tcctcctctgtagcttcctcg 1029
>emb|AL954662.13| Mouse DNA sequence from clone RP23-348L16 on chromosome 2, complete sequence Length = 132427 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 445 gaacatcccagtgaggtcagc 465 ||||||||||||||||||||| Sbjct: 66221 gaacatcccagtgaggtcagc 66201
>dbj|AB023042.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUL3 Length = 82010 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 488 tcctcctctgtagcttcctcg 508 ||||||||||||||||||||| Sbjct: 28872 tcctcctctgtagcttcctcg 28892
>emb|AJ416755.1|MTR416755 Medicago truncatula partial mRNA for alpha1,3-fucosyltransferase (fuct3 gene) Length = 658 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 591 tagttccagcaacaagtgactggaa 615 |||||||||||||||| |||||||| Sbjct: 380 tagttccagcaacaagcgactggaa 356
>gb|AY082445.1| Medicago sativa clone MS1-3FTb alpha 1,3 fucosyltransferase mRNA, complete cds Length = 2134 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 591 tagttccagcaacaagtgactggaa 615 |||||||||||||||| |||||||| Sbjct: 1087 tagttccagcaacaagcgactggaa 1063
>gb|AY082444.1| Medicago sativa clone MS1-3FTa alpha 1,3 fucosyltransferase mRNA, complete cds Length = 2027 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 591 tagttccagcaacaagtgactggaa 615 |||||||||||||||| |||||||| Sbjct: 1087 tagttccagcaacaagcgactggaa 1063
>gb|AY557602.1| Medicago truncatula cultivar Jemalong core alpha 1,3-fucosyltransferase (FUT2) gene, complete cds Length = 3124 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 591 tagttccagcaacaagtgactggaa 615 |||||||||||||||| |||||||| Sbjct: 1783 tagttccagcaacaagcgactggaa 1759
>emb|AL592224.17| Mouse DNA sequence from clone RP23-174G1 on chromosome 1, complete sequence Length = 217775 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 551 atagacactggatcaccaatc 571 ||||||||||||||||||||| Sbjct: 172496 atagacactggatcaccaatc 172476
>emb|AL645963.9| Mouse DNA sequence from clone RP23-76C16 on chromosome 11, complete sequence Length = 176154 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 417 caagtgcaaccccagtgtgtg 437 ||||||||||||||||||||| Sbjct: 43692 caagtgcaaccccagtgtgtg 43672
>ref|XM_549923.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2276 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 gtactggaaaataaagatga 110 |||||||||||||||||||| Sbjct: 1015 gtactggaaaataaagatga 1034
>gb|AC161060.6| Mus musculus BAC clone RP23-69N10 from chromosome 6, complete sequence Length = 222363 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 ttattattgatattacatga 24 |||||||||||||||||||| Sbjct: 64681 ttattattgatattacatga 64700
>emb|AL357032.13| Human DNA sequence from clone RP11-432M2 on chromosome 9 Contains a novel gene, complete sequence Length = 115438 Score = 40.1 bits (20), Expect = 9.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 66 tagttagaagagcctcaagaacctggta 93 |||||| ||||||||||||||| ||||| Sbjct: 81551 tagttataagagcctcaagaacttggta 81578
>dbj|AP004237.1| Proteus vulgaris plasmid Rts1 DNA, complete sequence Length = 217182 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 tattacatgatacagatgaa 34 |||||||||||||||||||| Sbjct: 59786 tattacatgatacagatgaa 59767
>gb|AC068892.7| Homo sapiens chromosome 10 clone RP11-116D21, complete sequence Length = 161178 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 aggttaataaaaggtaagct 193 |||||||||||||||||||| Sbjct: 48951 aggttaataaaaggtaagct 48970
>gb|AC090466.5| Homo sapiens chromosome 8, clone RP11-619O19, complete sequence Length = 191049 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 ttattgatattacatgatac 27 |||||||||||||||||||| Sbjct: 42079 ttattgatattacatgatac 42098
>gb|AC021546.7|AC021546 Homo sapiens chromosome 8, clone RP11-574O7, complete sequence Length = 207756 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 ttattgatattacatgatac 27 |||||||||||||||||||| Sbjct: 12507 ttattgatattacatgatac 12488
>gb|AC098982.7| Rattus norvegicus BAC CH230-46O20 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 227790 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 552 tagacactggatcaccaatc 571 |||||||||||||||||||| Sbjct: 192638 tagacactggatcaccaatc 192619
>gb|AC008206.10|AC008206 Drosophila melanogaster, chromosome 3R, region 96B-96B, BAC clone BACR03I15, complete sequence Length = 181132 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 464 gcaagcgccgtcgcatccat 483 |||||||||||||||||||| Sbjct: 10915 gcaagcgccgtcgcatccat 10896
>gb|AC008205.7|AC008205 Drosophila melanogaster, chromosome 3R, region 96A-96B, BAC clone BACR33F18, complete sequence Length = 215711 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 464 gcaagcgccgtcgcatccat 483 |||||||||||||||||||| Sbjct: 194905 gcaagcgccgtcgcatccat 194886
>gb|AC124076.5| Homo sapiens chromosome 8, clone RP11-962G15, complete sequence Length = 183098 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 563 tcaccaatctgtatggcaga 582 |||||||||||||||||||| Sbjct: 102197 tcaccaatctgtatggcaga 102178
>dbj|AP002747.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0698G03 Length = 147857 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 gtactggaaaataaagatga 110 |||||||||||||||||||| Sbjct: 56784 gtactggaaaataaagatga 56765
>dbj|AP002867.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0463F06 Length = 144322 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 gtactggaaaataaagatga 110 |||||||||||||||||||| Sbjct: 144013 gtactggaaaataaagatga 143994
>emb|AL445594.3|CNS07ED4 Human chromosome 14 DNA sequence BAC R-74H1 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 171409 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 478 atccatgagttcctcctctg 497 |||||||||||||||||||| Sbjct: 145321 atccatgagttcctcctctg 145340
>dbj|AK066041.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013046E24, full insert sequence Length = 2277 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 gtactggaaaataaagatga 110 |||||||||||||||||||| Sbjct: 1015 gtactggaaaataaagatga 1034
>gb|AY112514.1| Zea mays CL891_1 mRNA sequence Length = 1846 Score = 40.1 bits (20), Expect = 9.4 Identities = 56/68 (82%) Strand = Plus / Minus Query: 308 tggtagtcgatctttgattgtgtgaactttagcccgtgtgctgtactaacaaccaccgtg 367 |||||||||||||| || || | |||||| || ||||| || || || || ||||| ||| Sbjct: 1490 tggtagtcgatcttcgactgcgagaacttgaggccgtgagccgtgctgacgaccacggtg 1431 Query: 368 cggtcgtt 375 |||||||| Sbjct: 1430 cggtcgtt 1423
>gb|AE003749.3| Drosophila melanogaster chromosome 3R, section 87 of 118 of the complete sequence Length = 228433 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 464 gcaagcgccgtcgcatccat 483 |||||||||||||||||||| Sbjct: 198475 gcaagcgccgtcgcatccat 198456
>dbj|AP006205.1| Homo sapiens genomic DNA, chromosome 8, clone:RP11-441L16, complete sequence Length = 157665 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 563 tcaccaatctgtatggcaga 582 |||||||||||||||||||| Sbjct: 129240 tcaccaatctgtatggcaga 129259
>dbj|AP006204.1| Homo sapiens genomic DNA, chromosome 8, clone:RP11-112G7, complete sequence Length = 169075 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 563 tcaccaatctgtatggcaga 582 |||||||||||||||||||| Sbjct: 66879 tcaccaatctgtatggcaga 66898
>emb|AL352981.4|CNS05TC0 Human chromosome 14 DNA sequence BAC R-15E14 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 158214 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 478 atccatgagttcctcctctg 497 |||||||||||||||||||| Sbjct: 63523 atccatgagttcctcctctg 63542
>dbj|AP000075.1| Homo sapiens genomic DNA, chromosome 8p11.2, senescence gene region, section 11/19, complete sequence Length = 100000 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 563 tcaccaatctgtatggcaga 582 |||||||||||||||||||| Sbjct: 90692 tcaccaatctgtatggcaga 90673 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,518,877 Number of Sequences: 3902068 Number of extensions: 5518877 Number of successful extensions: 112427 Number of sequences better than 10.0: 72 Number of HSP's better than 10.0 without gapping: 73 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 112165 Number of HSP's gapped (non-prelim): 243 length of query: 684 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 661 effective length of database: 17,143,297,704 effective search space: 11331719782344 effective search space used: 11331719782344 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)