| Clone Name | rbags30h21 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_189370.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 540 Score = 428 bits (216), Expect = e-116 Identities = 354/400 (88%) Strand = Plus / Minus Query: 298 acccctgaaagctggctggtagtcagcaggagctccacccttctcaccagcaaaatcacc 357 |||||| |||| ||||||| | ||||| ||||| ||||||||||| ||| |||||||||| Sbjct: 474 acccctaaaagatggctggaactcagctggagcaccacccttctcgccaccaaaatcacc 415 Query: 358 aggagcaccacgtgggcctcctctgtaaccatccctgtcaccatacctaggcctgtcacc 417 ||||||||||||||||| || ||||||||||||||||||||| |||| ||||||||||| Sbjct: 414 tggagcaccacgtgggccacccctgtaaccatccctgtcaccaaacctgggcctgtcacc 355 Query: 418 ctcaaaacgaggaggacccctggggcggtcaccgggtgggccagagccgaaggggcggga 477 |||||| ||||| || || |||||||||||||| || |||||||||||||| ||||| || Sbjct: 354 ctcaaagcgaggcgggcctctggggcggtcaccaggagggccagagccgaatgggcgaga 295 Query: 478 cgggggcttggcggacttcttgagggtgttgggcacgatctcagacggcaggttgaggaa 537 |||||||||||| ||||||||||||||||| ||||| | |||||| |||||||||||| | Sbjct: 294 cgggggcttggcagacttcttgagggtgttaggcacaacctcagatggcaggttgaggta 235 Query: 538 ggtgcggaggaactcaatgccgtcgttggtcaggtaccagtagtagtgctgccacgagaa 597 | |||||||| ||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 234 gctgcggaggtgctcaatgccatcattggtcaggtaccagtagtagtgctgccacgagaa 175 Query: 598 ggtctccctgacgtactccttggacttgaagctctgcatgagcttgatgacctcgaggtt 657 ||||||||| || |||||||| ||||||||||||||||||||||| || ||||| | ||| Sbjct: 174 ggtctccctcacatactcctttgacttgaagctctgcatgagcttaatcacctccaagtt 115 Query: 658 cgaggcatcgacctgggggtgcttggccaggttgtagtcc 697 | |||| |||| |||||||||||||||||||||||| Sbjct: 114 gggcacatcaacctttgggtgcttggccaggttgtagtcc 75
>dbj|AK073846.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033070I05, full insert sequence Length = 900 Score = 428 bits (216), Expect = e-116 Identities = 354/400 (88%) Strand = Plus / Minus Query: 298 acccctgaaagctggctggtagtcagcaggagctccacccttctcaccagcaaaatcacc 357 |||||| |||| ||||||| | ||||| ||||| ||||||||||| ||| |||||||||| Sbjct: 562 acccctaaaagatggctggaactcagctggagcaccacccttctcgccaccaaaatcacc 503 Query: 358 aggagcaccacgtgggcctcctctgtaaccatccctgtcaccatacctaggcctgtcacc 417 ||||||||||||||||| || ||||||||||||||||||||| |||| ||||||||||| Sbjct: 502 tggagcaccacgtgggccacccctgtaaccatccctgtcaccaaacctgggcctgtcacc 443 Query: 418 ctcaaaacgaggaggacccctggggcggtcaccgggtgggccagagccgaaggggcggga 477 |||||| ||||| || || |||||||||||||| || |||||||||||||| ||||| || Sbjct: 442 ctcaaagcgaggcgggcctctggggcggtcaccaggagggccagagccgaatgggcgaga 383 Query: 478 cgggggcttggcggacttcttgagggtgttgggcacgatctcagacggcaggttgaggaa 537 |||||||||||| ||||||||||||||||| ||||| | |||||| |||||||||||| | Sbjct: 382 cgggggcttggcagacttcttgagggtgttaggcacaacctcagatggcaggttgaggta 323 Query: 538 ggtgcggaggaactcaatgccgtcgttggtcaggtaccagtagtagtgctgccacgagaa 597 | |||||||| ||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 322 gctgcggaggtgctcaatgccatcattggtcaggtaccagtagtagtgctgccacgagaa 263 Query: 598 ggtctccctgacgtactccttggacttgaagctctgcatgagcttgatgacctcgaggtt 657 ||||||||| || |||||||| ||||||||||||||||||||||| || ||||| | ||| Sbjct: 262 ggtctccctcacatactcctttgacttgaagctctgcatgagcttaatcacctccaagtt 203 Query: 658 cgaggcatcgacctgggggtgcttggccaggttgtagtcc 697 | |||| |||| |||||||||||||||||||||||| Sbjct: 202 gggcacatcaacctttgggtgcttggccaggttgtagtcc 163
>gb|BT016501.1| Zea mays clone Contig334 mRNA sequence Length = 841 Score = 404 bits (204), Expect = e-109 Identities = 351/400 (87%) Strand = Plus / Minus Query: 298 acccctgaaagctggctggtagtcagcaggagctccacccttctcaccagcaaaatcacc 357 |||||| |||| ||||||| | || |||||||| | ||||||||||||| |||||||||| Sbjct: 537 acccctaaaagatggctggaaatccgcaggagcactacccttctcaccaccaaaatcacc 478 Query: 358 aggagcaccacgtgggcctcctctgtaaccatccctgtcaccatacctaggcctgtcacc 417 ||||| ||||| |||||||||||||||||||| || ||| ||||||| ||||| | Sbjct: 477 cattgcacctcgtggacctcctctgtaaccatccctatccccaaacctaggtctgtcttc 418 Query: 418 ctcaaaacgaggaggacccctggggcggtcaccgggtgggccagagccgaaggggcggga 477 | |||| ||||| |||||||||||||||||||| |||||||||||||| ||||| ||||| Sbjct: 417 cccaaagcgagggggacccctggggcggtcacccggtgggccagagccaaagggacggga 358 Query: 478 cgggggcttggcggacttcttgagggtgttgggcacgatctcagacggcaggttgaggaa 537 ||||||||||| |||||||||||||||||||||||| | ||| ||||||||||||||||| Sbjct: 357 cgggggcttggaggacttcttgagggtgttgggcacaacctctgacggcaggttgaggaa 298 Query: 538 ggtgcggaggaactcaatgccgtcgttggtcaggtaccagtagtagtgctgccacgagaa 597 | |||||||| ||||||||| |||||||| |||||||||||||||| |||||| ||||| Sbjct: 297 gctgcggaggtgctcaatgccatcgttggtgaggtaccagtagtagtactgccaggagaa 238 Query: 598 ggtctccctgacgtactccttggacttgaagctctgcatgagcttgatgacctcgaggtt 657 |||||||||||| |||||||||||||||||||||||||||||||| || ||||| ||||| Sbjct: 237 ggtctccctgacatactccttggacttgaagctctgcatgagcttaatcacctccaggtt 178 Query: 658 cgaggcatcgacctgggggtgcttggccaggttgtagtcc 697 | | || | || ||||||||||||||||||||||||| Sbjct: 177 gggcacgtcaagcttggggtgcttggccaggttgtagtcc 138
>ref|XM_472497.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 552 Score = 333 bits (168), Expect = 5e-88 Identities = 333/388 (85%) Strand = Plus / Minus Query: 310 tggctggtagtcagcaggagctccacccttctcaccagcaaaatcaccaggagcaccacg 369 ||||||| | ||||||||||||||||||||||||||| |||| ||||||||||||||||| Sbjct: 462 tggctggaactcagcaggagctccacccttctcaccaccaaagtcaccaggagcaccacg 403 Query: 370 tgggcctcctctgtaaccatccctgtcaccatacctaggcctgtcaccctcaaaacgagg 429 || || || | ||| ||||| ||||||||| |||| |||||||| || ||||| ||||| Sbjct: 402 aggaccaccacggtacccatctctgtcaccaaaccttggcctgtccccttcaaagcgagg 343 Query: 430 aggacccctggggcggtcaccgggtgggccagagccgaaggggcgggacgggggcttggc 489 || ||||| |||||||| || ||||||||||| || || |||||| || ||| |||| Sbjct: 342 cgggccccttgggcggtcgccaggtgggccagaaccaaatgggcggccaggtggcctggc 283 Query: 490 ggacttcttgagggtgttgggcacgatctcagacggcaggttgaggaaggtgcggaggaa 549 ||||||||||| ||| ||||| |||||||| |||||||| ||| || |||| ||| Sbjct: 282 agacttcttgagtgtggcaggcacaatctcagatggcaggttaaggtagttgcgcaggtg 223 Query: 550 ctcaatgccgtcgttggtcaggtaccagtagtagtgctgccacgagaaggtctccctgac 609 ||||||||| |||||||| |||||||||||||||| |||||| ||||||||||||||||| Sbjct: 222 ctcaatgccatcgttggtgaggtaccagtagtagtactgccaggagaaggtctccctgac 163 Query: 610 gtactccttggacttgaagctctgcatgagcttgatgacctcgaggttcgaggcatcgac 669 |||||||||||||||||||||||||||||||||||| |||| ||||||| |||||| Sbjct: 162 gtactccttggacttgaagctctgcatgagcttgatcacctgcaggttcggcacatcgat 103 Query: 670 ctgggggtgcttggccaggttgtagtcc 697 ||| |||||||| ||||||||||||||| Sbjct: 102 ctgcgggtgcttcgccaggttgtagtcc 75
>dbj|AK102190.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033087A06, full insert sequence Length = 902 Score = 325 bits (164), Expect = 1e-85 Identities = 332/388 (85%) Strand = Plus / Minus Query: 310 tggctggtagtcagcaggagctccacccttctcaccagcaaaatcaccaggagcaccacg 369 ||||||| | ||||||||||||||||||||||||||| |||| ||||||||||||||||| Sbjct: 555 tggctggaactcagcaggagctccacccttctcaccaccaaagtcaccaggagcaccacg 496 Query: 370 tgggcctcctctgtaaccatccctgtcaccatacctaggcctgtcaccctcaaaacgagg 429 || || || | ||| ||||| ||||||||| |||| |||||||| || ||||| ||||| Sbjct: 495 aggaccaccacggtacccatctctgtcaccaaaccttggcctgtccccttcaaagcgagg 436 Query: 430 aggacccctggggcggtcaccgggtgggccagagccgaaggggcgggacgggggcttggc 489 || ||||| |||||||| || ||||||||||| || || |||||| || ||| |||| Sbjct: 435 cgggccccttgggcggtcgccaggtgggccagaaccaaatgggcggccaggtggcctggc 376 Query: 490 ggacttcttgagggtgttgggcacgatctcagacggcaggttgaggaaggtgcggaggaa 549 ||||||| ||| ||| ||||| |||||||| |||||||| ||| || |||| ||| Sbjct: 375 agacttctcgagtgtggcaggcacaatctcagatggcaggttaaggtagttgcgcaggtg 316 Query: 550 ctcaatgccgtcgttggtcaggtaccagtagtagtgctgccacgagaaggtctccctgac 609 ||||||||| |||||||| |||||||||||||||| |||||| ||||||||||||||||| Sbjct: 315 ctcaatgccatcgttggtgaggtaccagtagtagtactgccaggagaaggtctccctgac 256 Query: 610 gtactccttggacttgaagctctgcatgagcttgatgacctcgaggttcgaggcatcgac 669 |||||||||||||||||||||||||||||||||||| |||| ||||||| |||||| Sbjct: 255 gtactccttggacttgaagctctgcatgagcttgatcacctgcaggttcggcacatcgat 196 Query: 670 ctgggggtgcttggccaggttgtagtcc 697 ||| |||||||| ||||||||||||||| Sbjct: 195 ctgcgggtgcttcgccaggttgtagtcc 168
>dbj|AB054123.1| Oryza sativa (japonica cultivar-group) mRNA for ribosomal protein S10, complete cds Length = 756 Score = 297 bits (150), Expect = 3e-77 Identities = 321/378 (84%) Strand = Plus / Minus Query: 320 tcagcaggagctccacccttctcaccagcaaaatcaccaggagcaccacgtgggcctcct 379 ||||||||||||||||||||||||||| |||| ||||||||||||||||| || || || Sbjct: 543 tcagcaggagctccacccttctcaccaccaaagtcaccaggagcaccacgaggaccacca 484 Query: 380 ctgtaaccatccctgtcaccatacctaggcctgtcaccctcaaaacgaggaggacccctg 439 | ||| ||||| ||||||||| |||| |||||||| || ||||| ||||| || ||||| Sbjct: 483 cggtacccatctctgtcaccaaaccttggcctgtccccttcaaagcgaggcgggcccctt 424 Query: 440 gggcggtcaccgggtgggccagagccgaaggggcgggacgggggcttggcggacttcttg 499 || ||||| || ||||||||||| || || ||||| || ||| |||| ||||||||| Sbjct: 423 ggacggtcgccaggtgggccagaaccaaatgggcgaccaggtggcctggcagacttcttg 364 Query: 500 agggtgttgggcacgatctcagacggcaggttgaggaaggtgcggaggaactcaatgccg 559 || ||| ||||| |||||||| |||||||| ||| || || | ||| ||||||||| Sbjct: 363 agtgtggcaggcacaatctcagatggcaggttaaggtagttgagcaggtgctcaatgcca 304 Query: 560 tcgttggtcaggtaccagtagtagtgctgccacgagaaggtctccctgacgtactccttg 619 |||||||| |||||||||||||||| |||||| ||||||||||||||||||||||||||| Sbjct: 303 tcgttggtgaggtaccagtagtagtactgccaggagaaggtctccctgacgtactccttg 244 Query: 620 gacttgaagctctgcatgagcttgatgacctcgaggttcgaggcatcgacctgggggtgc 679 ||||||||||||||||||| |||||| |||| ||||||| |||||| ||| |||||| Sbjct: 243 gacttgaagctctgcatgaacttgatcacctgcaggttcggcacatcgatctgcgggtgc 184 Query: 680 ttggccaggttgtagtcc 697 || ||||||||||||||| Sbjct: 183 ttcgccaggttgtagtcc 166
>gb|AY103548.1| Zea mays PCO091529 mRNA sequence Length = 1541 Score = 295 bits (149), Expect = 1e-76 Identities = 335/397 (84%) Strand = Plus / Minus Query: 301 cctgaaagctggctggtagtcagcaggagctccacccttctcaccagcaaaatcaccagg 360 |||||| | ||||||| | |||||||||||||||| ||| || ||| |||| |||||||| Sbjct: 717 cctgaatgatggctggaactcagcaggagctccactcttatcgccaccaaagtcaccagg 658 Query: 361 agcaccacgtgggcctcctctgtaaccatccctgtcaccatacctaggcctgtcaccctc 420 ||||||||| || || || | ||| |||||||||||||| |||| |||||||| || || Sbjct: 657 agcaccacgaggaccaccacggtactcatccctgtcaccaaaccttggcctgtcgccgtc 598 Query: 421 aaaacgaggaggacccctggggcggtcaccgggtgggccagagccgaaggggcgggacgg 480 ||||||| || ||||| ||||||||||| || ||||||||||| || |||||| || Sbjct: 597 aaaacgacctgggccccttgggcggtcaccaggagggccagagccaaatgggcggccagg 538 Query: 481 gggcttggcggacttcttgagggtgttgggcacgatctcagacggcaggttgaggaaggt 540 |||||||| ||||||||||| ||| ||||||||||||||||| ||||| ||| || | Sbjct: 537 tggcttggcagacttcttgagcgtggcaggcacgatctcagacgggaggttcaggtagtt 478 Query: 541 gcggaggaactcaatgccgtcgttggtcaggtaccagtagtagtgctgccacgagaaggt 600 ||| ||| ||||||||| |||||||| || ||||||||||||| |||||| |||||||| Sbjct: 477 gcgtaggtgctcaatgccatcgttggtgagataccagtagtagtactgccaggagaaggt 418 Query: 601 ctccctgacgtactccttggacttgaagctctgcatgagcttgatgacctcgaggttcga 660 |||||| || |||||||||||||| |||||||||||||||||||| |||| |||||| | Sbjct: 417 ctccctaacatactccttggacttaaagctctgcatgagcttgatcacctggaggttggg 358 Query: 661 ggcatcgacctgggggtgcttggccaggttgtagtcc 697 |||||| ||| |||||||| ||||||||||||||| Sbjct: 357 cacatcgatctgcgggtgcttcgccaggttgtagtcc 321 Score = 167 bits (84), Expect = 6e-38 Identities = 132/148 (89%) Strand = Plus / Minus Query: 550 ctcaatgccgtcgttggtcaggtaccagtagtagtgctgccacgagaaggtctccctgac 609 ||||||||| |||||||| |||||||||||||||| |||||| ||||||||||| ||||| Sbjct: 181 ctcaatgccatcgttggtgaggtaccagtagtagtactgccaggagaaggtctctctgac 122 Query: 610 gtactccttggacttgaagctctgcatgagcttgatgacctcgaggttcgaggcatcgac 669 ||||||||||||||||||||||||||||||||||| |||| |||||| | |||| | Sbjct: 121 atactccttggacttgaagctctgcatgagcttgatcacctggaggttgggcacatcaat 62 Query: 670 ctgggggtgcttggccaggttgtagtcc 697 ||| |||||||| ||||||||||||||| Sbjct: 61 ctgtgggtgcttcgccaggttgtagtcc 34
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 289 bits (146), Expect = 6e-75 Identities = 233/262 (88%) Strand = Plus / Plus Query: 436 cctggggcggtcaccgggtgggccagagccgaaggggcgggacgggggcttggcggactt 495 ||||||||||||||| || |||||||||||||| ||||| |||||||||||||| ||||| Sbjct: 42418825 cctggggcggtcaccaggagggccagagccgaatgggcgagacgggggcttggcagactt 42418884 Query: 496 cttgagggtgttgggcacgatctcagacggcaggttgaggaaggtgcggaggaactcaat 555 |||||||||||| ||||| | |||||| |||||||||||| || |||||||| |||||| Sbjct: 42418885 cttgagggtgttaggcacaacctcagatggcaggttgaggtagctgcggaggtgctcaat 42418944 Query: 556 gccgtcgttggtcaggtaccagtagtagtgctgccacgagaaggtctccctgacgtactc 615 ||| || |||||||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct: 42418945 gccatcattggtcaggtaccagtagtagtgctgccacgagaaggtctccctcacatactc 42419004 Query: 616 cttggacttgaagctctgcatgagcttgatgacctcgaggttcgaggcatcgacctgggg 675 ||| ||||||||||||||||||||||| || ||||| | ||| | |||| |||| || Sbjct: 42419005 ctttgacttgaagctctgcatgagcttaatcacctccaagttgggcacatcaacctttgg 42419064 Query: 676 gtgcttggccaggttgtagtcc 697 |||||||||||||||||||||| Sbjct: 42419065 gtgcttggccaggttgtagtcc 42419086 Score = 147 bits (74), Expect = 6e-32 Identities = 116/130 (89%) Strand = Plus / Plus Query: 300 ccctgaaagctggctggtagtcagcaggagctccacccttctcaccagcaaaatcaccag 359 |||| |||| ||||||| | ||||| ||||| ||||||||||| ||| |||||||||| | Sbjct: 42418206 ccctaaaagatggctggaactcagctggagcaccacccttctcgccaccaaaatcacctg 42418265 Query: 360 gagcaccacgtgggcctcctctgtaaccatccctgtcaccatacctaggcctgtcaccct 419 |||||||||||||||| || ||||||||||||||||||||| |||| ||||||||||||| Sbjct: 42418266 gagcaccacgtgggccacccctgtaaccatccctgtcaccaaacctgggcctgtcaccct 42418325 Query: 420 caaaacgagg 429 |||| ||||| Sbjct: 42418326 caaagcgagg 42418335
>dbj|AP003263.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0483G10 Length = 190721 Score = 289 bits (146), Expect = 6e-75 Identities = 233/262 (88%) Strand = Plus / Plus Query: 436 cctggggcggtcaccgggtgggccagagccgaaggggcgggacgggggcttggcggactt 495 ||||||||||||||| || |||||||||||||| ||||| |||||||||||||| ||||| Sbjct: 78163 cctggggcggtcaccaggagggccagagccgaatgggcgagacgggggcttggcagactt 78222 Query: 496 cttgagggtgttgggcacgatctcagacggcaggttgaggaaggtgcggaggaactcaat 555 |||||||||||| ||||| | |||||| |||||||||||| || |||||||| |||||| Sbjct: 78223 cttgagggtgttaggcacaacctcagatggcaggttgaggtagctgcggaggtgctcaat 78282 Query: 556 gccgtcgttggtcaggtaccagtagtagtgctgccacgagaaggtctccctgacgtactc 615 ||| || |||||||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct: 78283 gccatcattggtcaggtaccagtagtagtgctgccacgagaaggtctccctcacatactc 78342 Query: 616 cttggacttgaagctctgcatgagcttgatgacctcgaggttcgaggcatcgacctgggg 675 ||| ||||||||||||||||||||||| || ||||| | ||| | |||| |||| || Sbjct: 78343 ctttgacttgaagctctgcatgagcttaatcacctccaagttgggcacatcaacctttgg 78402 Query: 676 gtgcttggccaggttgtagtcc 697 |||||||||||||||||||||| Sbjct: 78403 gtgcttggccaggttgtagtcc 78424 Score = 147 bits (74), Expect = 6e-32 Identities = 116/130 (89%) Strand = Plus / Plus Query: 300 ccctgaaagctggctggtagtcagcaggagctccacccttctcaccagcaaaatcaccag 359 |||| |||| ||||||| | ||||| ||||| ||||||||||| ||| |||||||||| | Sbjct: 77544 ccctaaaagatggctggaactcagctggagcaccacccttctcgccaccaaaatcacctg 77603 Query: 360 gagcaccacgtgggcctcctctgtaaccatccctgtcaccatacctaggcctgtcaccct 419 |||||||||||||||| || ||||||||||||||||||||| |||| ||||||||||||| Sbjct: 77604 gagcaccacgtgggccacccctgtaaccatccctgtcaccaaacctgggcctgtcaccct 77663 Query: 420 caaaacgagg 429 |||| ||||| Sbjct: 77664 caaagcgagg 77673
>gb|BT019280.1| Zea mays clone Contig953.F mRNA sequence Length = 872 Score = 260 bits (131), Expect = 6e-66 Identities = 331/397 (83%), Gaps = 3/397 (0%) Strand = Plus / Plus Query: 301 cctgaaagctggctggtagtcagcaggagctccacccttctcaccagcaaaatcaccagg 360 |||||||| ||||||| | |||||||||||||||| ||| || ||| | || |||||||| Sbjct: 325 cctgaaagatggctggaactcagcaggagctccactcttatcgccaccgaagtcaccagg 384 Query: 361 agcaccacgtgggcctcctctgtaaccatccctgtcaccatacctaggcctgtcaccctc 420 ||||||||| || || || | ||| |||||||||| ||| |||| || ||||| || Sbjct: 385 agcaccacgaggaccaccacggtactcatccctgtctccaaaccttggtctgtct---tc 441 Query: 421 aaaacgaggaggacccctggggcggtcaccgggtgggccagagccgaaggggcgggacgg 480 ||||||| ||| ||||| ||||||||||| || ||||||||||| || || ||| | | Sbjct: 442 aaaacgaccagggccccttgggcggtcaccaggagggccagagccaaatggacggcccag 501 Query: 481 gggcttggcggacttcttgagggtgttgggcacgatctcagacggcaggttgaggaaggt 540 ||| |||| ||||||||||| ||| ||||||||||||||||| ||||| ||| || | Sbjct: 502 tggcctggcagacttcttgagcgtggcaggcacgatctcagacgggaggttcaggtagtt 561 Query: 541 gcggaggaactcaatgccgtcgttggtcaggtaccagtagtagtgctgccacgagaaggt 600 ||| ||| ||||||||| |||||||| |||||||||||||||| |||||| |||||||| Sbjct: 562 gcgtaggtgctcaatgccatcgttggtgaggtaccagtagtagtactgccaggagaaggt 621 Query: 601 ctccctgacgtactccttggacttgaagctctgcatgagcttgatgacctcgaggttcga 660 ||| ||||| ||||||||||||||||||||||||||||||||||| |||| |||||| | Sbjct: 622 ctctctgacatactccttggacttgaagctctgcatgagcttgatcacctggaggttggg 681 Query: 661 ggcatcgacctgggggtgcttggccaggttgtagtcc 697 |||| | ||| |||||||| ||||||||||||||| Sbjct: 682 cacatcaatctgtgggtgcttcgccaggttgtagtcc 718
>emb|AL606632.5| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042L16, complete sequence Length = 163738 Score = 226 bits (114), Expect = 8e-56 Identities = 222/258 (86%) Strand = Plus / Minus Query: 440 gggcggtcaccgggtgggccagagccgaaggggcgggacgggggcttggcggacttcttg 499 |||||||| || ||||||||||| || || |||||| || ||| |||| ||||||||| Sbjct: 152441 gggcggtcgccaggtgggccagaaccaaatgggcggccaggtggcctggcagacttcttg 152382 Query: 500 agggtgttgggcacgatctcagacggcaggttgaggaaggtgcggaggaactcaatgccg 559 || ||| ||||| |||||||| |||||||| ||| || |||| ||| ||||||||| Sbjct: 152381 agtgtggcaggcacaatctcagatggcaggttaaggtagttgcgcaggtgctcaatgcca 152322 Query: 560 tcgttggtcaggtaccagtagtagtgctgccacgagaaggtctccctgacgtactccttg 619 |||||||| |||||||||||||||| |||||| ||||||||||||||||||||||||||| Sbjct: 152321 tcgttggtgaggtaccagtagtagtactgccaggagaaggtctccctgacgtactccttg 152262 Query: 620 gacttgaagctctgcatgagcttgatgacctcgaggttcgaggcatcgacctgggggtgc 679 |||||||||||||||||||||||||| |||| ||||||| |||||| ||| |||||| Sbjct: 152261 gacttgaagctctgcatgagcttgatcacctgcaggttcggcacatcgatctgcgggtgc 152202 Query: 680 ttggccaggttgtagtcc 697 || ||||||||||||||| Sbjct: 152201 ttcgccaggttgtagtcc 152184 Score = 113 bits (57), Expect = 8e-22 Identities = 111/129 (86%) Strand = Plus / Minus Query: 310 tggctggtagtcagcaggagctccacccttctcaccagcaaaatcaccaggagcaccacg 369 ||||||| | ||||||||||||||||||||||||||| |||| ||||||||||||||||| Sbjct: 153170 tggctggaactcagcaggagctccacccttctcaccaccaaagtcaccaggagcaccacg 153111 Query: 370 tgggcctcctctgtaaccatccctgtcaccatacctaggcctgtcaccctcaaaacgagg 429 || || || | ||| ||||| ||||||||| |||| |||||||| || ||||| ||||| Sbjct: 153110 aggaccaccacggtacccatctctgtcaccaaaccttggcctgtccccttcaaagcgagg 153051 Query: 430 aggacccct 438 || ||||| Sbjct: 153050 cgggcccct 153042
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 226 bits (114), Expect = 8e-56 Identities = 222/258 (86%) Strand = Plus / Minus Query: 440 gggcggtcaccgggtgggccagagccgaaggggcgggacgggggcttggcggacttcttg 499 |||||||| || ||||||||||| || || |||||| || ||| |||| ||||||||| Sbjct: 21338967 gggcggtcgccaggtgggccagaaccaaatgggcggccaggtggcctggcagacttcttg 21338908 Query: 500 agggtgttgggcacgatctcagacggcaggttgaggaaggtgcggaggaactcaatgccg 559 || ||| ||||| |||||||| |||||||| ||| || |||| ||| ||||||||| Sbjct: 21338907 agtgtggcaggcacaatctcagatggcaggttaaggtagttgcgcaggtgctcaatgcca 21338848 Query: 560 tcgttggtcaggtaccagtagtagtgctgccacgagaaggtctccctgacgtactccttg 619 |||||||| |||||||||||||||| |||||| ||||||||||||||||||||||||||| Sbjct: 21338847 tcgttggtgaggtaccagtagtagtactgccaggagaaggtctccctgacgtactccttg 21338788 Query: 620 gacttgaagctctgcatgagcttgatgacctcgaggttcgaggcatcgacctgggggtgc 679 |||||||||||||||||||||||||| |||| ||||||| |||||| ||| |||||| Sbjct: 21338787 gacttgaagctctgcatgagcttgatcacctgcaggttcggcacatcgatctgcgggtgc 21338728 Query: 680 ttggccaggttgtagtcc 697 || ||||||||||||||| Sbjct: 21338727 ttcgccaggttgtagtcc 21338710 Score = 113 bits (57), Expect = 8e-22 Identities = 111/129 (86%) Strand = Plus / Minus Query: 310 tggctggtagtcagcaggagctccacccttctcaccagcaaaatcaccaggagcaccacg 369 ||||||| | ||||||||||||||||||||||||||| |||| ||||||||||||||||| Sbjct: 21339696 tggctggaactcagcaggagctccacccttctcaccaccaaagtcaccaggagcaccacg 21339637 Query: 370 tgggcctcctctgtaaccatccctgtcaccatacctaggcctgtcaccctcaaaacgagg 429 || || || | ||| ||||| ||||||||| |||| |||||||| || ||||| ||||| Sbjct: 21339636 aggaccaccacggtacccatctctgtcaccaaaccttggcctgtccccttcaaagcgagg 21339577 Query: 430 aggacccct 438 || ||||| Sbjct: 21339576 cgggcccct 21339568
>ref|XM_466144.1| Oryza sativa (japonica cultivar-group), mRNA Length = 853 Score = 210 bits (106), Expect = 5e-51 Identities = 298/362 (82%) Strand = Plus / Minus Query: 289 accaccagcacccctgaaagctggctggtagtcagcaggagctccacccttctcaccagc 348 |||||||| || |||||| | ||||||| | || |||||||| ||||||||||||||| | Sbjct: 563 accaccagaactcctgaatgatggctggaattctgcaggagcaccacccttctcaccacc 504 Query: 349 aaaatcaccaggagcaccacgtgggcctcctctgtaaccatccctgtcaccatacctagg 408 |||||||||||| |||||||| || || || | ||| ||||||| ||| ||| |||| || Sbjct: 503 aaaatcaccaggcgcaccacgaggtccaccacggtagccatcccggtctccaaaccttgg 444 Query: 409 cctgtcaccctcaaaacgaggaggacccctggggcggtcaccgggtgggccagagccgaa 468 ||||| || || || ||||| || ||||| ||||| ||||| || ||||||||||| || Sbjct: 443 tctgtccccttcgaaccgaggtgggccccttgggcgatcaccaggggggccagagccaaa 384 Query: 469 ggggcgggacgggggcttggcggacttcttgagggtgttgggcacgatctcagacggcag 528 |||||| || ||| | || ||||||||||| || || || ||||||||||||| Sbjct: 383 tgggcggcctggtggccttgcagacttcttgagtgtagcaggtacaatctcagacggcaa 324 Query: 529 gttgaggaaggtgcggaggaactcaatgccgtcgttggtcaggtaccagtagtagtgctg 588 ||| ||| | | | ||| ||||||||| || || || |||||||||||||||| ||| Sbjct: 323 gttaaggtaattcctcaggtgctcaatgccatcattagtgaggtaccagtagtagtactg 264 Query: 589 ccacgagaaggtctccctgacgtactccttggacttgaagctctgcatgagcttgatgac 648 ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 263 ccaggagaaggtctccctgacatactccttggacttgaagctctgcatgagcttgatgac 204 Query: 649 ct 650 || Sbjct: 203 ct 202
>dbj|AK066564.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013073I17, full insert sequence Length = 853 Score = 210 bits (106), Expect = 5e-51 Identities = 298/362 (82%) Strand = Plus / Minus Query: 289 accaccagcacccctgaaagctggctggtagtcagcaggagctccacccttctcaccagc 348 |||||||| || |||||| | ||||||| | || |||||||| ||||||||||||||| | Sbjct: 563 accaccagaactcctgaatgatggctggaattctgcaggagcaccacccttctcaccacc 504 Query: 349 aaaatcaccaggagcaccacgtgggcctcctctgtaaccatccctgtcaccatacctagg 408 |||||||||||| |||||||| || || || | ||| ||||||| ||| ||| |||| || Sbjct: 503 aaaatcaccaggcgcaccacgaggtccaccacggtagccatcccggtctccaaaccttgg 444 Query: 409 cctgtcaccctcaaaacgaggaggacccctggggcggtcaccgggtgggccagagccgaa 468 ||||| || || || ||||| || ||||| ||||| ||||| || ||||||||||| || Sbjct: 443 tctgtccccttcgaaccgaggtgggccccttgggcgatcaccaggggggccagagccaaa 384 Query: 469 ggggcgggacgggggcttggcggacttcttgagggtgttgggcacgatctcagacggcag 528 |||||| || ||| | || ||||||||||| || || || ||||||||||||| Sbjct: 383 tgggcggcctggtggccttgcagacttcttgagtgtagcaggtacaatctcagacggcaa 324 Query: 529 gttgaggaaggtgcggaggaactcaatgccgtcgttggtcaggtaccagtagtagtgctg 588 ||| ||| | | | ||| ||||||||| || || || |||||||||||||||| ||| Sbjct: 323 gttaaggtaattcctcaggtgctcaatgccatcattagtgaggtaccagtagtagtactg 264 Query: 589 ccacgagaaggtctccctgacgtactccttggacttgaagctctgcatgagcttgatgac 648 ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 263 ccaggagaaggtctccctgacatactccttggacttgaagctctgcatgagcttgatgac 204 Query: 649 ct 650 || Sbjct: 203 ct 202
>gb|BT017535.1| Zea mays clone EL01N0422A10.c mRNA sequence Length = 568 Score = 149 bits (75), Expect = 1e-32 Identities = 192/231 (83%) Strand = Plus / Minus Query: 301 cctgaaagctggctggtagtcagcaggagctccacccttctcaccagcaaaatcaccagg 360 |||||| | ||||||| | |||||||||||||||| ||| || ||| |||| |||||||| Sbjct: 259 cctgaatgatggctggaactcagcaggagctccactcttatcgccaccaaagtcaccagg 200 Query: 361 agcaccacgtgggcctcctctgtaaccatccctgtcaccatacctaggcctgtcaccctc 420 ||||||||| || || || | ||| ||||||||||||||| |||| |||||||| || || Sbjct: 199 agcaccacgaggaccaccacggtacccatccctgtcaccaaaccttggcctgtcgccgtc 140 Query: 421 aaaacgaggaggacccctggggcggtcaccgggtgggccagagccgaaggggcgggacgg 480 |||||| || ||||| ||||||||||| || ||||||||||| || |||||| || Sbjct: 139 aaaacggcctgggccccttgggcggtcaccaggagggccagagccaaatgggcggccagg 80 Query: 481 gggcttggcggacttcttgagggtgttgggcacgatctcagacggcaggtt 531 |||||||| ||||||||||| ||| ||||||||||||||||| ||||| Sbjct: 79 tggcttggcagacttcttgagcgtggcaggcacgatctcagacgggaggtt 29
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 145 bits (73), Expect = 2e-31 Identities = 94/101 (93%) Strand = Plus / Minus Query: 550 ctcaatgccgtcgttggtcaggtaccagtagtagtgctgccacgagaaggtctccctgac 609 ||||||||| || || || |||||||||||||||| |||||| ||||||||||||||||| Sbjct: 20669849 ctcaatgccatcattagtgaggtaccagtagtagtactgccaggagaaggtctccctgac 20669790 Query: 610 gtactccttggacttgaagctctgcatgagcttgatgacct 650 |||||||||||||||||||||||||||||||||||||||| Sbjct: 20669789 atactccttggacttgaagctctgcatgagcttgatgacct 20669749 Score = 77.8 bits (39), Expect = 4e-11 Identities = 96/115 (83%) Strand = Plus / Minus Query: 300 ccctgaaagctggctggtagtcagcaggagctccacccttctcaccagcaaaatcaccag 359 ||||||| | ||||||| | || |||||||| ||||||||||||||| |||||||||||| Sbjct: 20670662 ccctgaatgatggctggaattctgcaggagcaccacccttctcaccaccaaaatcaccag 20670603 Query: 360 gagcaccacgtgggcctcctctgtaaccatccctgtcaccatacctaggcctgtc 414 | |||||||| || || || | ||| ||||||| ||| ||| |||| || ||||| Sbjct: 20670602 gcgcaccacgaggtccaccacggtagccatcccggtctccaaaccttggtctgtc 20670548
>dbj|AP004775.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0451A10 Length = 137046 Score = 145 bits (73), Expect = 2e-31 Identities = 94/101 (93%) Strand = Plus / Minus Query: 550 ctcaatgccgtcgttggtcaggtaccagtagtagtgctgccacgagaaggtctccctgac 609 ||||||||| || || || |||||||||||||||| |||||| ||||||||||||||||| Sbjct: 20955 ctcaatgccatcattagtgaggtaccagtagtagtactgccaggagaaggtctccctgac 20896 Query: 610 gtactccttggacttgaagctctgcatgagcttgatgacct 650 |||||||||||||||||||||||||||||||||||||||| Sbjct: 20895 atactccttggacttgaagctctgcatgagcttgatgacct 20855 Score = 77.8 bits (39), Expect = 4e-11 Identities = 96/115 (83%) Strand = Plus / Minus Query: 300 ccctgaaagctggctggtagtcagcaggagctccacccttctcaccagcaaaatcaccag 359 ||||||| | ||||||| | || |||||||| ||||||||||||||| |||||||||||| Sbjct: 21768 ccctgaatgatggctggaattctgcaggagcaccacccttctcaccaccaaaatcaccag 21709 Query: 360 gagcaccacgtgggcctcctctgtaaccatccctgtcaccatacctaggcctgtc 414 | |||||||| || || || | ||| ||||||| ||| ||| |||| || ||||| Sbjct: 21708 gcgcaccacgaggtccaccacggtagccatcccggtctccaaaccttggtctgtc 21654
>dbj|AP005469.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0040I22 Length = 134273 Score = 145 bits (73), Expect = 2e-31 Identities = 94/101 (93%) Strand = Plus / Minus Query: 550 ctcaatgccgtcgttggtcaggtaccagtagtagtgctgccacgagaaggtctccctgac 609 ||||||||| || || || |||||||||||||||| |||||| ||||||||||||||||| Sbjct: 66704 ctcaatgccatcattagtgaggtaccagtagtagtactgccaggagaaggtctccctgac 66645 Query: 610 gtactccttggacttgaagctctgcatgagcttgatgacct 650 |||||||||||||||||||||||||||||||||||||||| Sbjct: 66644 atactccttggacttgaagctctgcatgagcttgatgacct 66604 Score = 77.8 bits (39), Expect = 4e-11 Identities = 96/115 (83%) Strand = Plus / Minus Query: 300 ccctgaaagctggctggtagtcagcaggagctccacccttctcaccagcaaaatcaccag 359 ||||||| | ||||||| | || |||||||| ||||||||||||||| |||||||||||| Sbjct: 67517 ccctgaatgatggctggaattctgcaggagcaccacccttctcaccaccaaaatcaccag 67458 Query: 360 gagcaccacgtgggcctcctctgtaaccatccctgtcaccatacctaggcctgtc 414 | |||||||| || || || | ||| ||||||| ||| ||| |||| || ||||| Sbjct: 67457 gcgcaccacgaggtccaccacggtagccatcccggtctccaaaccttggtctgtc 67403
>gb|DQ252521.1| Solanum tuberosum clone 111F10 40S ribosomal protein S10-like mRNA, complete cds Length = 859 Score = 107 bits (54), Expect = 5e-20 Identities = 114/134 (85%) Strand = Plus / Minus Query: 290 ccaccagcacccctgaaagctggctggtagtcagcaggagctccacccttctcaccagca 349 ||||||| |||||||||||| |||||||||||||| |||||||||||||||||||| || Sbjct: 527 ccaccagaacccctgaaagcaggctggtagtcagctggagctccacccttctcacctcca 468 Query: 350 aaatcaccaggagcaccacgtgggcctcctctgtaaccatccctgtcaccatacctaggc 409 || |||||||| | ||| | || || | | ||||||||| ||||| |||||||| ||| Sbjct: 467 aactcaccaggtggacctctaggtccagcacggtaaccatctctgtcgccataccttggc 408 Query: 410 ctgtcaccctcaaa 423 || ||||||||||| Sbjct: 407 ctatcaccctcaaa 394 Score = 69.9 bits (35), Expect = 1e-08 Identities = 89/107 (83%) Strand = Plus / Minus Query: 544 gaggaactcaatgccgtcgttggtcaggtaccagtagtagtgctgccacgagaaggtctc 603 ||||||||||||||| || || || |||||||||||||||||| ||| | ||| ||||| Sbjct: 276 gaggaactcaatgccatcatttgtaaggtaccagtagtagtgcatccaagcgaatgtctc 217 Query: 604 cctgacgtactccttggacttgaagctctgcatgagcttgatgacct 650 | || |||||||| || |||||||||||||| || ||||| |||| Sbjct: 216 gcgaacatactccttagatttgaagctctgcatcagtttgataacct 170
>gb|DQ268860.1| Solanum tuberosum clone 178H07 40S ribosomal protein S10-like protein mRNA, complete cds Length = 735 Score = 85.7 bits (43), Expect = 2e-13 Identities = 109/131 (83%) Strand = Plus / Minus Query: 290 ccaccagcacccctgaaagctggctggtagtcagcaggagctccacccttctcaccagca 349 |||||| ||||||| || || |||||||| ||||| |||||||||||||||||||| || Sbjct: 515 ccaccaccacccctaaatgcgggctggtaatcagctggagctccacccttctcacctcca 456 Query: 350 aaatcaccaggagcaccacgtgggcctcctctgtaaccatccctgtcaccatacctaggc 409 || |||||||| | ||| | ||| || | | |||||||||||| |||||| |||| ||| Sbjct: 455 aattcaccaggtggacctcttggaccagcacggtaaccatccctatcaccaaaccttggc 396 Query: 410 ctgtcaccctc 420 || |||||||| Sbjct: 395 ctatcaccctc 385 Score = 69.9 bits (35), Expect = 1e-08 Identities = 83/99 (83%) Strand = Plus / Minus Query: 544 gaggaactcaatgccgtcgttggtcaggtaccagtagtagtgctgccacgagaaggtctc 603 ||||||||||||||| || ||||| || ||||||||||||||| ||| | |||||||| Sbjct: 264 gaggaactcaatgccatcattggtaagataccagtagtagtgcatccaagcaaaggtctc 205 Query: 604 cctgacgtactccttggacttgaagctctgcatgagctt 642 | || |||||||| ||||| ||||||||||| ||||| Sbjct: 204 acgcacatactcctttgacttaaagctctgcatcagctt 166
>gb|DQ252484.1| Solanum tuberosum clone 048B07 40S ribosomal protein S10-like mRNA, complete cds Length = 738 Score = 85.7 bits (43), Expect = 2e-13 Identities = 109/131 (83%) Strand = Plus / Minus Query: 290 ccaccagcacccctgaaagctggctggtagtcagcaggagctccacccttctcaccagca 349 |||||| ||||||| || || |||||||| ||||| |||||||||||||||||||| || Sbjct: 513 ccaccaccacccctaaatgcgggctggtaatcagctggagctccacccttctcacctcca 454 Query: 350 aaatcaccaggagcaccacgtgggcctcctctgtaaccatccctgtcaccatacctaggc 409 || |||||||| | ||| | ||| || | | |||||||||||| |||||| |||| ||| Sbjct: 453 aattcaccaggtggacctcttggaccagcacggtaaccatccctatcaccaaaccttggc 394 Query: 410 ctgtcaccctc 420 || |||||||| Sbjct: 393 ctatcaccctc 383 Score = 69.9 bits (35), Expect = 1e-08 Identities = 83/99 (83%) Strand = Plus / Minus Query: 544 gaggaactcaatgccgtcgttggtcaggtaccagtagtagtgctgccacgagaaggtctc 603 ||||||||||||||| || ||||| || ||||||||||||||| ||| | |||||||| Sbjct: 262 gaggaactcaatgccatcattggtaagataccagtagtagtgcatccaagcaaaggtctc 203 Query: 604 cctgacgtactccttggacttgaagctctgcatgagctt 642 | || |||||||| ||||| ||||||||||| ||||| Sbjct: 202 acgcacatactcctttgacttaaagctctgcatcagctt 164
>emb|AJ538899.1|NTA538899 Nicotiana tabacum cDNA-AFLP-fragment BT2-M33-002 Length = 447 Score = 73.8 bits (37), Expect = 7e-10 Identities = 79/93 (84%) Strand = Plus / Minus Query: 544 gaggaactcaatgccgtcgttggtcaggtaccagtagtagtgctgccacgagaaggtctc 603 |||||||||||||||||| |||||||| ||||| ||||||||| ||| | |||||||| Sbjct: 143 gaggaactcaatgccgtcattggtcagataccaatagtagtgcatccaagcaaaggtctc 84 Query: 604 cctgacgtactccttggacttgaagctctgcat 636 | ||||| ||||| |||||||| |||||||| Sbjct: 83 acgcacgtattccttcgacttgaaactctgcat 51 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 290 ccaccagcacccctgaaagctggctggtagtcagcaggagctccaccctt 339 |||||| |||||||||| || |||||||||||||| |||||||||||||| Sbjct: 394 ccaccaccacccctgaatgcaggctggtagtcagctggagctccaccctt 345
>ref|NM_118706.2| Arabidopsis thaliana structural constituent of ribosome AT4G25740 transcript variant AT4G25740.1 mRNA, complete cds Length = 746 Score = 71.9 bits (36), Expect = 3e-09 Identities = 42/44 (95%) Strand = Plus / Minus Query: 599 gtctccctgacgtactccttggacttgaagctctgcatgagctt 642 |||||||| |||||||||||||||||||| |||||||||||||| Sbjct: 220 gtctccctaacgtactccttggacttgaaactctgcatgagctt 177 Score = 42.1 bits (21), Expect = 2.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 311 ggctggtagtcagcaggagctccacccttctca 343 |||||| | ||||| |||||||||||||||||| Sbjct: 490 ggctggaaatcagctggagctccacccttctca 458
>ref|NM_001036641.1| Arabidopsis thaliana structural constituent of ribosome AT4G25740 transcript variant AT4G25740.2 mRNA, complete cds Length = 736 Score = 71.9 bits (36), Expect = 3e-09 Identities = 42/44 (95%) Strand = Plus / Minus Query: 599 gtctccctgacgtactccttggacttgaagctctgcatgagctt 642 |||||||| |||||||||||||||||||| |||||||||||||| Sbjct: 235 gtctccctaacgtactccttggacttgaaactctgcatgagctt 192 Score = 42.1 bits (21), Expect = 2.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 311 ggctggtagtcagcaggagctccacccttctca 343 |||||| | ||||| |||||||||||||||||| Sbjct: 421 ggctggaaatcagctggagctccacccttctca 389
>gb|AY113926.1| Arabidopsis thaliana putative ribosomal protein S10 (At4g25740) mRNA, complete cds Length = 565 Score = 71.9 bits (36), Expect = 3e-09 Identities = 42/44 (95%) Strand = Plus / Minus Query: 599 gtctccctgacgtactccttggacttgaagctctgcatgagctt 642 |||||||| |||||||||||||||||||| |||||||||||||| Sbjct: 173 gtctccctaacgtactccttggacttgaaactctgcatgagctt 130 Score = 42.1 bits (21), Expect = 2.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 311 ggctggtagtcagcaggagctccacccttctca 343 |||||| | ||||| |||||||||||||||||| Sbjct: 443 ggctggaaatcagctggagctccacccttctca 411
>gb|AY035172.1| Arabidopsis thaliana putative ribosomal protein S10 (At4g25740) mRNA, complete cds Length = 762 Score = 71.9 bits (36), Expect = 3e-09 Identities = 42/44 (95%) Strand = Plus / Minus Query: 599 gtctccctgacgtactccttggacttgaagctctgcatgagctt 642 |||||||| |||||||||||||||||||| |||||||||||||| Sbjct: 220 gtctccctaacgtactccttggacttgaaactctgcatgagctt 177 Score = 42.1 bits (21), Expect = 2.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 311 ggctggtagtcagcaggagctccacccttctca 343 |||||| | ||||| |||||||||||||||||| Sbjct: 490 ggctggaaatcagctggagctccacccttctca 458
>emb|AL161563.2|ATCHRIV63 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 63 Length = 198777 Score = 71.9 bits (36), Expect = 3e-09 Identities = 42/44 (95%) Strand = Plus / Plus Query: 599 gtctccctgacgtactccttggacttgaagctctgcatgagctt 642 |||||||| |||||||||||||||||||| |||||||||||||| Sbjct: 190324 gtctccctaacgtactccttggacttgaaactctgcatgagctt 190367 Score = 42.1 bits (21), Expect = 2.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 311 ggctggtagtcagcaggagctccacccttctca 343 |||||| | ||||| |||||||||||||||||| Sbjct: 189972 ggctggaaatcagctggagctccacccttctca 190004
>emb|AL050400.1|ATL73G19 Arabidopsis thaliana DNA chromosome 4, cosmid clone L73G19 (ESSA project) Length = 42446 Score = 71.9 bits (36), Expect = 3e-09 Identities = 42/44 (95%) Strand = Plus / Plus Query: 599 gtctccctgacgtactccttggacttgaagctctgcatgagctt 642 |||||||| |||||||||||||||||||| |||||||||||||| Sbjct: 38817 gtctccctaacgtactccttggacttgaaactctgcatgagctt 38860 Score = 42.1 bits (21), Expect = 2.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 311 ggctggtagtcagcaggagctccacccttctca 343 |||||| | ||||| |||||||||||||||||| Sbjct: 38465 ggctggaaatcagctggagctccacccttctca 38497
>emb|AL049480.1|ATF14M19 Arabidopsis thaliana DNA chromosome 4, BAC clone F14M19 (ESSA project) Length = 91228 Score = 71.9 bits (36), Expect = 3e-09 Identities = 42/44 (95%) Strand = Plus / Plus Query: 599 gtctccctgacgtactccttggacttgaagctctgcatgagctt 642 |||||||| |||||||||||||||||||| |||||||||||||| Sbjct: 5468 gtctccctaacgtactccttggacttgaaactctgcatgagctt 5511 Score = 42.1 bits (21), Expect = 2.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 311 ggctggtagtcagcaggagctccacccttctca 343 |||||| | ||||| |||||||||||||||||| Sbjct: 5116 ggctggaaatcagctggagctccacccttctca 5148
>emb|AJ538646.1|NTA538646 Nicotiana tabacum cDNA-AFLP-fragment BC32-M2-013 Length = 257 Score = 69.9 bits (35), Expect = 1e-08 Identities = 62/71 (87%) Strand = Plus / Minus Query: 290 ccaccagcacccctgaaagctggctggtagtcagcaggagctccacccttctcaccagca 349 ||||||| |||||||||||| || || |||||||| ||||||||||| || |||||| || Sbjct: 237 ccaccagaacccctgaaagcaggttgatagtcagctggagctccacctttttcaccacca 178 Query: 350 aaatcaccagg 360 || |||||||| Sbjct: 177 aactcaccagg 167
>emb|BX039192.1|CNS092EK Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAB3DG06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 730 Score = 65.9 bits (33), Expect = 2e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 509 ggcacgatctcagacggcaggttgaggaaggtgcggaggaactcaatgccgtcgttggtc 568 ||||||||||| |||||||| | ||||||| ||| ||| |||| || || ||||||||| Sbjct: 333 ggcacgatctcggacggcagatgcaggaaggcgcgcaggtactcgataccctcgttggtc 274 Query: 569 aggtaccagtagtagtg 585 || |||||||||||||| Sbjct: 273 agataccagtagtagtg 257
>ref|XM_311275.2| Anopheles gambiae str. PEST ENSANGP00000017569 (ENSANGG00000015080), mRNA Length = 935 Score = 65.9 bits (33), Expect = 2e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 509 ggcacgatctcagacggcaggttgaggaaggtgcggaggaactcaatgccgtcgttggtc 568 ||||||||||| |||||||| | ||||||| ||| ||| |||| || || ||||||||| Sbjct: 387 ggcacgatctcggacggcagatgcaggaaggcgcgcaggtactcgataccctcgttggtc 328 Query: 569 aggtaccagtagtagtg 585 || |||||||||||||| Sbjct: 327 agataccagtagtagtg 311
>emb|AJ538565.1|NTA538565 Nicotiana tabacum cDNA-AFLP-fragment BC3-M22-025 Length = 233 Score = 61.9 bits (31), Expect = 3e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 298 acccctgaaagctggctggtagtcagcaggagctccacccttctcaccagcaaaatcacc 357 |||||||||||| ||||| ||||||| ||||||||||| || |||||| |||| ||||| Sbjct: 1 acccctgaaagcaggctgatagtcaggtggagctccacctttttcaccaccaaactcacc 60 Query: 358 agg 360 ||| Sbjct: 61 agg 63
>gb|DQ440253.1| Aedes aegypti clone AET-3036 ribosomal protein S10E mRNA, complete cds Length = 480 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 549 actcaatgccgtcgttggtcaggtaccagtagtagtg 585 ||||||| || |||||||||||||||||||||||||| Sbjct: 226 actcaataccctcgttggtcaggtaccagtagtagtg 190
>emb|CR937754.1| Single read from an extremity of a cDNA clone made from Aedes aegypti total adult females. 5-prime end of clone KW0AAB1YG04AAM1 from strain Liverpool of Aedes aegypti (yellow fever mosquito) Length = 624 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 549 actcaatgccgtcgttggtcaggtaccagtagtagtg 585 ||||||| || |||||||||||||||||||||||||| Sbjct: 277 actcaataccctcgttggtcaggtaccagtagtagtg 241
>emb|CR937727.1| Single read from an extremity of a cDNA clone made from Aedes aegypti total adult females. 5-prime end of clone KW0AAB1YH02AAM1 from strain Liverpool of Aedes aegypti (yellow fever mosquito) Length = 628 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 549 actcaatgccgtcgttggtcaggtaccagtagtagtg 585 ||||||| || |||||||||||||||||||||||||| Sbjct: 276 actcaataccctcgttggtcaggtaccagtagtagtg 240
>emb|CR937726.1| Single read from an extremity of a cDNA clone made from Aedes aegypti total adult females. 3-prime end of clone KW0AAB1YH02BBM1 from strain Liverpool of Aedes aegypti (yellow fever mosquito) Length = 610 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 549 actcaatgccgtcgttggtcaggtaccagtagtagtg 585 ||||||| || |||||||||||||||||||||||||| Sbjct: 334 actcaataccctcgttggtcaggtaccagtagtagtg 370
>gb|DQ066194.1| Ixodes scapularis isolate ISUFL81 40S ribosomal protein S10 mRNA, complete cds Length = 471 Score = 58.0 bits (29), Expect = 4e-05 Identities = 77/93 (82%) Strand = Plus / Minus Query: 493 cttcttgagggtgttgggcacgatctcagacggcaggttgaggaaggtgcggaggaactc 552 ||||||||||||| ||||| ||||| | ||||||| ||||||| || ||| ||| Sbjct: 282 cttcttgagggtggccggcacaatctcggggggcaggtggaggaagtcccgcaggtactg 223 Query: 553 aatgccgtcgttggtcaggtaccagtagtagtg 585 ||||| |||||||||||||||||||||||||| Sbjct: 222 gatgccctcgttggtcaggtaccagtagtagtg 190
>gb|BC099929.1| Mus musculus plectin 1, mRNA (cDNA clone IMAGE:30056202), partial cds Length = 2616 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 551 tcaatgccgtcgttggtcaggtaccagtagtagtg 585 |||||||| ||||||||||||||||||||| |||| Sbjct: 423 tcaatgccctcgttggtcaggtaccagtagaagtg 389
>ref|NM_201389.1| Mus musculus plectin 1 (Plec1), transcript variant 6, mRNA Length = 15438 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 551 tcaatgccgtcgttggtcaggtaccagtagtagtg 585 |||||||| ||||||||||||||||||||| |||| Sbjct: 422 tcaatgccctcgttggtcaggtaccagtagaagtg 388
>ref|XM_994758.1| PREDICTED: Mus musculus plectin 1 (Plec1), mRNA Length = 14982 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 551 tcaatgccgtcgttggtcaggtaccagtagtagtg 585 |||||||| ||||||||||||||||||||| |||| Sbjct: 459 tcaatgccctcgttggtcaggtaccagtagaagtg 425
>gb|AY480038.1| Mus musculus plectin 6 mRNA, complete cds Length = 15438 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 551 tcaatgccgtcgttggtcaggtaccagtagtagtg 585 |||||||| ||||||||||||||||||||| |||| Sbjct: 422 tcaatgccctcgttggtcaggtaccagtagaagtg 388
>gb|AY088678.1| Arabidopsis thaliana clone 91769 mRNA, complete sequence Length = 768 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 304 gaaagctggctggtagtcagcaggagctccacccttctcaccagcaaaatcacca 358 ||||| ||||||||| || ||||||||||||||||| ||||| |||| |||||| Sbjct: 536 gaaagatggctggtaatctgcaggagctccacccttttcacctccaaactcacca 482 Score = 40.1 bits (20), Expect = 9.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 611 tactccttggacttgaagctctgcatgagctt 642 ||||||||||| ||||| |||||||| ||||| Sbjct: 235 tactccttggatttgaaactctgcataagctt 204
>gb|AF188009.1|AF188009 Mus musculus plectin isoform plec 1 (Plec1) mRNA, partial cds Length = 824 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 551 tcaatgccgtcgttggtcaggtaccagtagtagtg 585 |||||||| ||||||||||||||||||||| |||| Sbjct: 422 tcaatgccctcgttggtcaggtaccagtagaagtg 388
>gb|AF188008.1|AF188008 Mus musculus plectin isoform plec 1,2alpha (Plec1) mRNA, partial cds Length = 3075 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 551 tcaatgccgtcgttggtcaggtaccagtagtagtg 585 |||||||| ||||||||||||||||||||| |||| Sbjct: 422 tcaatgccctcgttggtcaggtaccagtagaagtg 388
>gb|AC110211.16| Mus musculus chromosome 15, clone RP23-192B21, complete sequence Length = 202844 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 551 tcaatgccgtcgttggtcaggtaccagtagtagtg 585 |||||||| ||||||||||||||||||||| |||| Sbjct: 135450 tcaatgccctcgttggtcaggtaccagtagaagtg 135484
>gb|AY850935.1| Pectinaria gouldii ribosomal protein S10 mRNA, complete cds Length = 605 Score = 52.0 bits (26), Expect = 0.003 Identities = 44/50 (88%) Strand = Plus / Minus Query: 560 tcgttggtcaggtaccagtagtagtgctgccacgagaaggtctccctgac 609 ||||| |||||||||||||||||||| |||| ||||||||||| |||| Sbjct: 235 tcgtttgtcaggtaccagtagtagtgtcgccagcagaaggtctccttgac 186
>gb|AY070896.1| Drosophila melanogaster LP04958 full insert cDNA Length = 1020 Score = 52.0 bits (26), Expect = 0.003 Identities = 65/78 (83%) Strand = Plus / Minus Query: 508 gggcacgatctcagacggcaggttgaggaaggtgcggaggaactcaatgccgtcgttggt 567 |||||||||||| | |||||||| |||| || |||| || ||| || || |||||||| Sbjct: 622 gggcacgatctcgggcggcaggtggaggtagctgcgcagctcctcgattccctcgttggt 563 Query: 568 caggtaccagtagtagtg 585 ||||||||||||||||| Sbjct: 562 gaggtaccagtagtagtg 545
>ref|XM_780517.1| PREDICTED: Strongylocentrotus purpuratus similar to 40S ribosomal protein S10 (LOC580462), mRNA Length = 561 Score = 52.0 bits (26), Expect = 0.003 Identities = 26/26 (100%) Strand = Plus / Minus Query: 560 tcgttggtcaggtaccagtagtagtg 585 |||||||||||||||||||||||||| Sbjct: 228 tcgttggtcaggtaccagtagtagtg 203
>ref|NM_167668.1| Drosophila melanogaster Ribosomal protein S10b CG14206-RB, transcript variant B (RpS10b), mRNA Length = 746 Score = 52.0 bits (26), Expect = 0.003 Identities = 65/78 (83%) Strand = Plus / Minus Query: 508 gggcacgatctcagacggcaggttgaggaaggtgcggaggaactcaatgccgtcgttggt 567 |||||||||||| | |||||||| |||| || |||| || ||| || || |||||||| Sbjct: 368 gggcacgatctcgggcggcaggtggaggtagctgcgcagctcctcgattccctcgttggt 309 Query: 568 caggtaccagtagtagtg 585 ||||||||||||||||| Sbjct: 308 gaggtaccagtagtagtg 291
>ref|NM_134480.2| Drosophila melanogaster Ribosomal protein S10b CG14206-RC, transcript variant C (RpS10b), mRNA Length = 731 Score = 52.0 bits (26), Expect = 0.003 Identities = 65/78 (83%) Strand = Plus / Minus Query: 508 gggcacgatctcagacggcaggttgaggaaggtgcggaggaactcaatgccgtcgttggt 567 |||||||||||| | |||||||| |||| || |||| || ||| || || |||||||| Sbjct: 353 gggcacgatctcgggcggcaggtggaggtagctgcgcagctcctcgattccctcgttggt 294 Query: 568 caggtaccagtagtagtg 585 ||||||||||||||||| Sbjct: 293 gaggtaccagtagtagtg 276
>gb|AC010847.11|AC010847 Drosophila melanogaster, chromosome X, region 18D-18D, BAC clone BACR10M08, complete sequence Length = 180213 Score = 52.0 bits (26), Expect = 0.003 Identities = 65/78 (83%) Strand = Plus / Minus Query: 508 gggcacgatctcagacggcaggttgaggaaggtgcggaggaactcaatgccgtcgttggt 567 |||||||||||| | |||||||| |||| || |||| || ||| || || |||||||| Sbjct: 139850 gggcacgatctcgggcggcaggtggaggtagctgcgcagctcctcgattccctcgttggt 139791 Query: 568 caggtaccagtagtagtg 585 ||||||||||||||||| Sbjct: 139790 gaggtaccagtagtagtg 139773
>gb|AE003512.3| Drosophila melanogaster chromosome X, section 64 of 74 of the complete sequence Length = 346474 Score = 52.0 bits (26), Expect = 0.003 Identities = 65/78 (83%) Strand = Plus / Minus Query: 508 gggcacgatctcagacggcaggttgaggaaggtgcggaggaactcaatgccgtcgttggt 567 |||||||||||| | |||||||| |||| || |||| || ||| || || |||||||| Sbjct: 245616 gggcacgatctcgggcggcaggtggaggtagctgcgcagctcctcgattccctcgttggt 245557 Query: 568 caggtaccagtagtagtg 585 ||||||||||||||||| Sbjct: 245556 gaggtaccagtagtagtg 245539
>ref|NM_124643.2| Arabidopsis thaliana structural constituent of ribosome AT5G52650 mRNA, complete cds Length = 778 Score = 48.1 bits (24), Expect = 0.039 Identities = 39/44 (88%) Strand = Plus / Minus Query: 599 gtctccctgacgtactccttggacttgaagctctgcatgagctt 642 |||||||| || ||||||||||| ||||| |||||||| ||||| Sbjct: 245 gtctccctaacatactccttggatttgaaactctgcataagctt 202 Score = 46.1 bits (23), Expect = 0.15 Identities = 47/55 (85%) Strand = Plus / Minus Query: 304 gaaagctggctggtagtcagcaggagctccacccttctcaccagcaaaatcacca 358 ||||| ||||||||| || || |||||||||||||| ||||| |||| |||||| Sbjct: 534 gaaagatggctggtaatctgcgggagctccacccttttcacctccaaactcacca 480
>ref|NM_022401.1| Rattus norvegicus plectin 1 (Plec1), mRNA Length = 15231 Score = 48.1 bits (24), Expect = 0.039 Identities = 30/32 (93%) Strand = Plus / Minus Query: 554 atgccgtcgttggtcaggtaccagtagtagtg 585 ||||| ||||||||||||||||||||| |||| Sbjct: 236 atgccctcgttggtcaggtaccagtagaagtg 205
>gb|AY480027.1| Rattus norvegicus plectin 6 mRNA, complete cds Length = 15420 Score = 48.1 bits (24), Expect = 0.039 Identities = 30/32 (93%) Strand = Plus / Minus Query: 554 atgccgtcgttggtcaggtaccagtagtagtg 585 ||||| ||||||||||||||||||||| |||| Sbjct: 427 atgccctcgttggtcaggtaccagtagaagtg 396
>gb|AY122932.1| Arabidopsis thaliana unknown protein (At5g52650) mRNA, complete cds Length = 571 Score = 48.1 bits (24), Expect = 0.039 Identities = 39/44 (88%) Strand = Plus / Minus Query: 599 gtctccctgacgtactccttggacttgaagctctgcatgagctt 642 |||||||| || ||||||||||| ||||| |||||||| ||||| Sbjct: 173 gtctccctaacatactccttggatttgaaactctgcataagctt 130 Score = 46.1 bits (23), Expect = 0.15 Identities = 47/55 (85%) Strand = Plus / Minus Query: 304 gaaagctggctggtagtcagcaggagctccacccttctcaccagcaaaatcacca 358 ||||| ||||||||| || || |||||||||||||| ||||| |||| |||||| Sbjct: 462 gaaagatggctggtaatctgcgggagctccacccttttcacctccaaactcacca 408
>gb|AY065217.1| Arabidopsis thaliana unknown protein (At5g52650) mRNA, complete cds Length = 778 Score = 48.1 bits (24), Expect = 0.039 Identities = 39/44 (88%) Strand = Plus / Minus Query: 599 gtctccctgacgtactccttggacttgaagctctgcatgagctt 642 |||||||| || ||||||||||| ||||| |||||||| ||||| Sbjct: 238 gtctccctaacatactccttggatttgaaactctgcataagctt 195 Score = 46.1 bits (23), Expect = 0.15 Identities = 47/55 (85%) Strand = Plus / Minus Query: 304 gaaagctggctggtagtcagcaggagctccacccttctcaccagcaaaatcacca 358 ||||| ||||||||| || || |||||||||||||| ||||| |||| |||||| Sbjct: 527 gaaagatggctggtaatctgcgggagctccacccttttcacctccaaactcacca 473
>emb|X59601.1|RNPLECT Rat mRNA for plectin Length = 15231 Score = 48.1 bits (24), Expect = 0.039 Identities = 30/32 (93%) Strand = Plus / Minus Query: 554 atgccgtcgttggtcaggtaccagtagtagtg 585 ||||| ||||||||||||||||||||| |||| Sbjct: 236 atgccctcgttggtcaggtaccagtagaagtg 205
>emb|BX830280.1|CNS0A19J Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB70ZC05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 752 Score = 48.1 bits (24), Expect = 0.039 Identities = 39/44 (88%) Strand = Plus / Minus Query: 599 gtctccctgacgtactccttggacttgaagctctgcatgagctt 642 |||||||| || ||||||||||| ||||| |||||||| ||||| Sbjct: 221 gtctccctaacatactccttggatttgaaactctgcataagctt 178 Score = 46.1 bits (23), Expect = 0.15 Identities = 47/55 (85%) Strand = Plus / Minus Query: 304 gaaagctggctggtagtcagcaggagctccacccttctcaccagcaaaatcacca 358 ||||| ||||||||| || || |||||||||||||| ||||| |||| |||||| Sbjct: 510 gaaagatggctggtaatctgcgggagctccacccttttcacctccaaactcacca 456
>emb|BX830062.1|CNS0A1D6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB57ZA08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 750 Score = 48.1 bits (24), Expect = 0.039 Identities = 39/44 (88%) Strand = Plus / Minus Query: 599 gtctccctgacgtactccttggacttgaagctctgcatgagctt 642 |||||||| || ||||||||||| ||||| |||||||| ||||| Sbjct: 219 gtctccctaacatactccttggatttgaaactctgcataagctt 176 Score = 46.1 bits (23), Expect = 0.15 Identities = 47/55 (85%) Strand = Plus / Minus Query: 304 gaaagctggctggtagtcagcaggagctccacccttctcaccagcaaaatcacca 358 ||||| ||||||||| || || |||||||||||||| ||||| |||| |||||| Sbjct: 508 gaaagatggctggtaatctgcgggagctccacccttttcacctccaaactcacca 454
>emb|BX829499.1|CNS0A1BF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB17ZG05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 592 Score = 48.1 bits (24), Expect = 0.039 Identities = 39/44 (88%) Strand = Plus / Minus Query: 599 gtctccctgacgtactccttggacttgaagctctgcatgagctt 642 |||||||| || ||||||||||| ||||| |||||||| ||||| Sbjct: 70 gtctccctaacatactccttggatttgaaactctgcataagctt 27 Score = 46.1 bits (23), Expect = 0.15 Identities = 47/55 (85%) Strand = Plus / Minus Query: 304 gaaagctggctggtagtcagcaggagctccacccttctcaccagcaaaatcacca 358 ||||| ||||||||| || || |||||||||||||| ||||| |||| |||||| Sbjct: 359 gaaagatggctggtaatctgcgggagctccacccttttcacctccaaactcacca 305
>dbj|AB025606.1| Arabidopsis thaliana genomic DNA, chromosome 5, BAC clone:F6N7 Length = 74282 Score = 48.1 bits (24), Expect = 0.039 Identities = 39/44 (88%) Strand = Plus / Plus Query: 599 gtctccctgacgtactccttggacttgaagctctgcatgagctt 642 |||||||| || ||||||||||| ||||| |||||||| ||||| Sbjct: 35857 gtctccctaacatactccttggatttgaaactctgcataagctt 35900 Score = 46.1 bits (23), Expect = 0.15 Identities = 47/55 (85%) Strand = Plus / Plus Query: 304 gaaagctggctggtagtcagcaggagctccacccttctcaccagcaaaatcacca 358 ||||| ||||||||| || || |||||||||||||| ||||| |||| |||||| Sbjct: 35474 gaaagatggctggtaatctgcgggagctccacccttttcacctccaaactcacca 35528
>dbj|AB049721.2| Pisum sativum ssa-11 mRNA for putative senescence-associated protein, complete cds Length = 1000 Score = 48.1 bits (24), Expect = 0.039 Identities = 36/40 (90%) Strand = Plus / Plus Query: 319 gtcagcaggagctccacccttctcaccagcaaaatcacca 358 ||||||||||||||||||||| || ||| |||| |||||| Sbjct: 242 gtcagcaggagctccacccttgtctccaccaaactcacca 281
>ref|XM_418029.1| PREDICTED: Gallus gallus similar to 40S ribosomal protein S10 (LOC419904), mRNA Length = 594 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 554 atgccgtcgttggtcaggtaccagtag 580 ||||| ||||||||||||||||||||| Sbjct: 280 atgccctcgttggtcaggtaccagtag 254
>gb|AY961467.1| Phytophthora infestans clone MY-06-E-07 ribosomal protein S10 mRNA, complete cds Length = 546 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 631 ctgcatgagcttgatgacctcgaggtt 657 |||||||||||||||||||| |||||| Sbjct: 165 ctgcatgagcttgatgacctggaggtt 139
>gb|DQ226795.1| Boechera divaricarpa isolate SLW-B-C05 mRNA sequence Length = 448 Score = 44.1 bits (22), Expect = 0.61 Identities = 123/157 (78%), Gaps = 6/157 (3%) Strand = Plus / Minus Query: 304 gaaagctggctggtagtcagcaggagctccacccttctcaccagcaaaatcaccaggagc 363 ||||| ||||||| | ||||| |||||||||||||| || || |||||||||| Sbjct: 299 gaaagatggctggaaatcagctggagctccacccttttcggcaccaaaatcacct----- 245 Query: 364 accacgtgggcctcctctgtaaccatccctgtcaccatacctaggcctgtcaccctcaaa 423 || ||||||||||| | ||| ||||| | ||||||||| || || | ||| || ||||| Sbjct: 244 -cctcgtgggcctccacggtatccatcacggtcaccatatctgggacggtctccttcaaa 186 Query: 424 acgaggaggacccctggggcggtcaccgggtgggcca 460 ||||| || || || ||||| ||||| ||||||||| Sbjct: 185 gcgaggtggtcctctcgggcgatcaccaggtgggcca 149
>gb|AY231709.1| Drosophila yakuba clone yak-em_CG14206 mRNA sequence Length = 405 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Minus Query: 560 tcgttggtcaggtaccagtagtagtg 585 |||||||| ||||||||||||||||| Sbjct: 140 tcgttggtgaggtaccagtagtagtg 115
>gb|AC087293.5| Homo sapiens chromosome 11, clone RP11-657D12, complete sequence Length = 154644 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 37 gtcttaatatcaaagagctcat 58 |||||||||||||||||||||| Sbjct: 84178 gtcttaatatcaaagagctcat 84199
>gb|AC100769.2| Homo sapiens chromosome 11, clone RP11-701P23, complete sequence Length = 171700 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 37 gtcttaatatcaaagagctcat 58 |||||||||||||||||||||| Sbjct: 42478 gtcttaatatcaaagagctcat 42457
>gb|U93872.2| Kaposi's sarcoma-associated herpesvirus glycoprotein M, DNA replication protein, glycoprotein, DNA replication protein, FLICE inhibitory protein and v-cyclin genes, complete cds, and tegument protein gene, partial cds Length = 133661 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 255 tgccaccgccgcctccacggc 275 ||||||||||||||||||||| Sbjct: 133357 tgccaccgccgcctccacggc 133377
>gb|BT016327.1| Zea mays clone Contig160 mRNA sequence Length = 717 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 256 gccaccgccgcctccacggcc 276 ||||||||||||||||||||| Sbjct: 326 gccaccgccgcctccacggcc 306
>gb|AC167241.2| Mus musculus BAC clone RP24-560M14 from chromosome 17, complete sequence Length = 184079 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 430 aggacccctggggcggtcacc 450 ||||||||||||||||||||| Sbjct: 94697 aggacccctggggcggtcacc 94677
>gb|AF148805.2| Human herpesvirus 8 isolate GK18, complete genome Length = 137969 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 255 tgccaccgccgcctccacggc 275 ||||||||||||||||||||| Sbjct: 133210 tgccaccgccgcctccacggc 133230
>emb|AL358092.26| Human DNA sequence from clone RP11-336A2 on chromosome 10, complete sequence Length = 103816 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 277 aaagggcctggcaccaccagc 297 ||||||||||||||||||||| Sbjct: 103275 aaagggcctggcaccaccagc 103255
>emb|AL160174.12| Human DNA sequence from clone RP11-333H4 on chromosome 10, complete sequence Length = 130574 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 277 aaagggcctggcaccaccagc 297 ||||||||||||||||||||| Sbjct: 1459 aaagggcctggcaccaccagc 1439
>gb|AF496729.1| Zea mays cultivar C_9 glycine-rich RNA binding protein gene, 3'UTR and partial cds Length = 732 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 256 gccaccgccgcctccacggcc 276 ||||||||||||||||||||| Sbjct: 390 gccaccgccgcctccacggcc 370
>gb|AF496728.1| Zea mays cultivar D_9 glycine-rich RNA binding protein gene, 3'UTR and partial cds Length = 750 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 256 gccaccgccgcctccacggcc 276 ||||||||||||||||||||| Sbjct: 408 gccaccgccgcctccacggcc 388
>gb|AF496727.1| Zea mays cultivar D_6 glycine-rich RNA binding protein gene, 3'UTR and partial cds Length = 750 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 256 gccaccgccgcctccacggcc 276 ||||||||||||||||||||| Sbjct: 408 gccaccgccgcctccacggcc 388
>gb|AF496726.1| Zea mays cultivar F_1 glycine-rich RNA binding protein gene, 3'UTR and partial cds Length = 732 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 256 gccaccgccgcctccacggcc 276 ||||||||||||||||||||| Sbjct: 390 gccaccgccgcctccacggcc 370
>gb|AF496724.1| Zea mays cultivar D_7 glycine-rich RNA binding protein gene, 3'UTR and partial cds Length = 739 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 256 gccaccgccgcctccacggcc 276 ||||||||||||||||||||| Sbjct: 397 gccaccgccgcctccacggcc 377
>gb|AF496722.1| Zea mays cultivar B84 glycine-rich RNA binding protein gene, 3'UTR and partial cds Length = 750 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 256 gccaccgccgcctccacggcc 276 ||||||||||||||||||||| Sbjct: 408 gccaccgccgcctccacggcc 388
>gb|AF496720.1| Zea mays cultivar 684 glycine-rich RNA binding protein gene, 3'UTR and partial cds Length = 750 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 256 gccaccgccgcctccacggcc 276 ||||||||||||||||||||| Sbjct: 408 gccaccgccgcctccacggcc 388
>gb|AF496719.1| Zea mays cultivar IVANA glycine-rich RNA binding protein gene, 3'UTR and partial cds Length = 749 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 256 gccaccgccgcctccacggcc 276 ||||||||||||||||||||| Sbjct: 407 gccaccgccgcctccacggcc 387
>gb|AF496717.1| Zea mays cultivar I_1 glycine-rich RNA binding protein gene, 3'UTR and partial cds Length = 732 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 256 gccaccgccgcctccacggcc 276 ||||||||||||||||||||| Sbjct: 390 gccaccgccgcctccacggcc 370
>gb|AF496716.1| Zea mays cultivar B73 glycine-rich RNA binding protein gene, 3'UTR and partial cds Length = 735 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 256 gccaccgccgcctccacggcc 276 ||||||||||||||||||||| Sbjct: 393 gccaccgccgcctccacggcc 373
>gb|AF496713.1| Zea mays cultivar B_6 glycine-rich RNA binding protein gene, 3'UTR and partial cds Length = 729 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 256 gccaccgccgcctccacggcc 276 ||||||||||||||||||||| Sbjct: 387 gccaccgccgcctccacggcc 367
>gb|AF496711.1| Zea mays cultivar F_3 glycine-rich RNA binding protein gene, 3'UTR and partial cds Length = 750 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 256 gccaccgccgcctccacggcc 276 ||||||||||||||||||||| Sbjct: 408 gccaccgccgcctccacggcc 388
>gb|AF496709.1| Zea mays cultivar H_5 glycine-rich RNA binding protein gene, 3'UTR and partial cds Length = 732 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 256 gccaccgccgcctccacggcc 276 ||||||||||||||||||||| Sbjct: 390 gccaccgccgcctccacggcc 370
>gb|AF496708.1| Zea mays cultivar H_3 glycine-rich RNA binding protein gene, 3'UTR and partial cds Length = 750 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 256 gccaccgccgcctccacggcc 276 ||||||||||||||||||||| Sbjct: 408 gccaccgccgcctccacggcc 388
>gb|AF496707.1| Zea mays cultivar J40 glycine-rich RNA binding protein gene, 3'UTR and partial cds Length = 750 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 256 gccaccgccgcctccacggcc 276 ||||||||||||||||||||| Sbjct: 408 gccaccgccgcctccacggcc 388
>gb|AF496705.1| Zea mays cultivar B_1 glycine-rich RNA binding protein gene, 3'UTR and partial cds Length = 705 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 256 gccaccgccgcctccacggcc 276 ||||||||||||||||||||| Sbjct: 363 gccaccgccgcctccacggcc 343
>gb|AF496704.1| Zea mays cultivar F_6 glycine-rich RNA binding protein gene, 3'UTR and partial cds Length = 750 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 256 gccaccgccgcctccacggcc 276 ||||||||||||||||||||| Sbjct: 408 gccaccgccgcctccacggcc 388
>gb|AF496703.1| Zea mays cultivar C_5 glycine-rich RNA binding protein gene, 3'UTR and partial cds Length = 754 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 256 gccaccgccgcctccacggcc 276 ||||||||||||||||||||| Sbjct: 412 gccaccgccgcctccacggcc 392
>gb|AF496702.1| Zea mays cultivar H_1 glycine-rich RNA binding protein gene, 3'UTR and partial cds Length = 749 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 256 gccaccgccgcctccacggcc 276 ||||||||||||||||||||| Sbjct: 407 gccaccgccgcctccacggcc 387
>emb|AL807749.21| Zebrafish DNA sequence from clone CH211-197F20, complete sequence Length = 198777 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 537 aggtgcggaggaactcaatgc 557 ||||||||||||||||||||| Sbjct: 35494 aggtgcggaggaactcaatgc 35514
>gb|U82242.2|KSU82242 Kaposi's sarcoma-associated herpesvirus chemokine receptor homolog gene, complete cds and large virion protein gene, partial cds Length = 5077 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 255 tgccaccgccgcctccacggc 275 ||||||||||||||||||||| Sbjct: 3734 tgccaccgccgcctccacggc 3754
>gb|AF034945.1|AF034945 Zea mays glycine-rich RNA binding protein (GRP) mRNA, complete cds Length = 790 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 256 gccaccgccgcctccacggcc 276 ||||||||||||||||||||| Sbjct: 356 gccaccgccgcctccacggcc 336
>gb|AC170884.3| Mus musculus BAC clone RP24-111L17 from chromosome 17, complete sequence Length = 180189 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 430 aggacccctggggcggtcacc 450 ||||||||||||||||||||| Sbjct: 27830 aggacccctggggcggtcacc 27810
>gb|BC052453.1| Mus musculus zinc finger protein 113, mRNA (cDNA clone MGC:63409 IMAGE:6410632), complete cds Length = 4697 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 320 tcagcaggagctccaccctt 339 |||||||||||||||||||| Sbjct: 1094 tcagcaggagctccaccctt 1113
>gb|AY781296.1| Expression vector pBI121_pro T-DNA region, complete sequence Length = 8196 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 1694 ccagcaaaatcaccagtagcacca 1671
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 256 gccaccgccgcctccacggccaaa 279 ||||||| |||||||||||||||| Sbjct: 211393 gccaccggcgcctccacggccaaa 211370
>ref|XM_522398.1| PREDICTED: Pan troglodytes similar to keratin 3 (LOC466998), mRNA Length = 1959 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 257 ccaccgccgcctccacggccaaag 280 |||||||||||||| ||||||||| Sbjct: 1781 ccaccgccgcctccccggccaaag 1758
>gb|BT017410.1| Zea mays clone EL01N0330H11.c mRNA sequence Length = 884 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 ccaccgccgcctccacggcc 276 |||||||||||||||||||| Sbjct: 370 ccaccgccgcctccacggcc 351
>gb|L29101.1|GPTHISHI Glyptotendipes barbipes histone H1-I gene, complete cds Length = 887 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 tcaccagcaaaatcaccagg 360 |||||||||||||||||||| Sbjct: 192 tcaccagcaaaatcaccagg 211
>gb|AC159257.2| Mus musculus BAC clone RP24-86H20 from chromosome 5, complete sequence Length = 202099 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 320 tcagcaggagctccaccctt 339 |||||||||||||||||||| Sbjct: 51608 tcagcaggagctccaccctt 51589
>gb|AY618909.1| Phage display vector pTScDisp, complete sequence Length = 5483 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 2067 ccagcaaaatcaccagtagcacca 2044
>gb|AY618908.1| Phage display vector pTDisp, complete sequence Length = 5511 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 1972 ccagcaaaatcaccagtagcacca 1949
>gb|BC054525.1| Mus musculus zinc finger protein 113, mRNA (cDNA clone MGC:62211 IMAGE:6410632), complete cds Length = 4697 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 320 tcagcaggagctccaccctt 339 |||||||||||||||||||| Sbjct: 1094 tcagcaggagctccaccctt 1113
>gb|BC056445.1| Mus musculus zinc finger protein 113, mRNA (cDNA clone MGC:66934 IMAGE:5703904), complete cds Length = 2964 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 320 tcagcaggagctccaccctt 339 |||||||||||||||||||| Sbjct: 1015 tcagcaggagctccaccctt 1034
>ref|XM_882864.1| PREDICTED: Bos taurus hypothetical protein LOC616551, transcript variant 2 (LOC616551), mRNA Length = 2093 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 279 agggcctggcaccaccagcacccc 302 ||||||||||||||||| |||||| Sbjct: 1348 agggcctggcaccaccaccacccc 1371
>ref|XM_869737.1| PREDICTED: Bos taurus hypothetical protein LOC616551, transcript variant 1 (LOC616551), mRNA Length = 2191 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 279 agggcctggcaccaccagcacccc 302 ||||||||||||||||| |||||| Sbjct: 1446 agggcctggcaccaccaccacccc 1469
>gb|BC056991.1| Mus musculus zinc finger protein 113, mRNA (cDNA clone IMAGE:6821633), containing frame-shift errors Length = 4131 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 320 tcagcaggagctccaccctt 339 |||||||||||||||||||| Sbjct: 1096 tcagcaggagctccaccctt 1115
>ref|NM_019747.3| Mus musculus zinc finger protein 113 (Zfp113), mRNA Length = 4697 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 320 tcagcaggagctccaccctt 339 |||||||||||||||||||| Sbjct: 1094 tcagcaggagctccaccctt 1113
>gb|AY598820.1| VCSM13 interference-resistant helper phage, complete genome Length = 8669 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 4445 ccagcaaaatcaccagtagcacca 4422
>gb|J02451.1|PFDCG Enterobacteria phage fd strain 478, complete genome Length = 6408 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 2594 ccagcaaaatcaccagtagcacca 2571
>gb|AC141566.4| Mus musculus BAC clone RP23-89G14 from chromosome 7, complete sequence Length = 236600 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 286 ggcaccaccagcacccctga 305 |||||||||||||||||||| Sbjct: 226707 ggcaccaccagcacccctga 226726
>gb|AC126442.4| Mus musculus BAC clone RP23-453M12 from chromosome 7, complete sequence Length = 204287 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 286 ggcaccaccagcacccctga 305 |||||||||||||||||||| Sbjct: 79881 ggcaccaccagcacccctga 79862
>gb|AC090681.13| Homo sapiens 12 BAC RP11-369C14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 93582 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 625 gaagctctgcatgagcttga 644 |||||||||||||||||||| Sbjct: 45206 gaagctctgcatgagcttga 45225
>gb|AY254174.1| Cloning vector pCOMB3H, complete sequence Length = 4681 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 4390 ccagcaaaatcaccagtagcacca 4367
>gb|AC009022.10| Homo sapiens chromosome 16 clone RP11-106J23, complete sequence Length = 190577 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 557 ccgtcgttggtcaggtaccagtag 580 ||||||||||| |||||||||||| Sbjct: 63839 ccgtcgttggtaaggtaccagtag 63816
>gb|DQ119053.1| Cloning vector pMAB136, complete sequence Length = 6740 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 3142 ccagcaaaatcaccagtagcacca 3119
>gb|AF268281.2| Phagemid cloning vector pComb3X, complete sequence Length = 3451 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 771 ccagcaaaatcaccagtagcacca 748
>emb|CR589881.11| Zebrafish DNA sequence from clone DKEY-188M1 in linkage group 14, complete sequence Length = 179964 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 535 gaaggtgcggaggaactcaa 554 |||||||||||||||||||| Sbjct: 14619 gaaggtgcggaggaactcaa 14600
>gb|U09365.1|XXU09365 Binary vector Bin19, complete sequence Length = 11777 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 7175 ccagcaaaatcaccagtagcacca 7198
>gb|AF167320.1| Mus musculus zinc finger protein ZFP113 mRNA, complete cds Length = 3031 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 320 tcagcaggagctccaccctt 339 |||||||||||||||||||| Sbjct: 1110 tcagcaggagctccaccctt 1129
>emb|X05421.1|HSKER65D Human DNA for 65kD keratin type II exons 6,7,8,9 and 3'flank Length = 2160 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 257 ccaccgccgcctccacggccaaag 280 |||||||||||||| ||||||||| Sbjct: 1582 ccaccgccgcctccccggccaaag 1559
>emb|V00604.2|INM13X Phage M13 genome Length = 6407 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 2594 ccagcaaaatcaccagtagcacca 2571
>emb|V00606.1|INXXF1 Genome of bacteriophage f1 (closely related to phages fd and m13) Length = 6407 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 2594 ccagcaaaatcaccagtagcacca 2571
>gb|AF485783.1| Binary vector pBI121, complete sequence Length = 14758 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 4603 ccagcaaaatcaccagtagcacca 4580
>emb|AJ628418.1| Homo sapiens mRNA for keratin 3 (KRT3 gene) Length = 2163 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 257 ccaccgccgcctccacggccaaag 280 |||||||||||||| ||||||||| Sbjct: 1667 ccaccgccgcctccccggccaaag 1644
>gb|AF464139.1| Filamentous phage display vector c8-4, complete sequence Length = 7775 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 2594 ccagcaaaatcaccagtagcacca 2571
>gb|AF464138.1| Filamentous phage display vector f8-5, complete sequence Length = 9183 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 2594 ccagcaaaatcaccagtagcacca 2571
>dbj|AK220556.1| Mus musculus mRNA for mKIAA4229 protein Length = 4397 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 320 tcagcaggagctccaccctt 339 |||||||||||||||||||| Sbjct: 1150 tcagcaggagctccaccctt 1169
>gb|AC069549.5| Homo sapiens chromosome 10 clone RP11-575A19, complete sequence Length = 170554 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 tctcaccagcaaaatcacca 358 |||||||||||||||||||| Sbjct: 147597 tctcaccagcaaaatcacca 147616
>gb|L08840.1|SYNMWB2341 mWB2341 phage cloning vector Length = 6871 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 2594 ccagcaaaatcaccagtagcacca 2571
>gb|M77826.1|SYNM13MP8V M13mp8 phage cloning vector Length = 7229 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 2594 ccagcaaaatcaccagtagcacca 2571
>ref|NM_057088.1| Homo sapiens keratin 3 (KRT3), mRNA Length = 2224 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 257 ccaccgccgcctccacggccaaag 280 |||||||||||||| ||||||||| Sbjct: 1715 ccaccgccgcctccccggccaaag 1692
>emb|BX649515.7| Zebrafish DNA sequence from clone CH211-120F15 in linkage group 3, complete sequence Length = 153400 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 535 gaaggtgcggaggaactcaa 554 |||||||||||||||||||| Sbjct: 33518 gaaggtgcggaggaactcaa 33499
>gb|AF362081.1|AF362081 Peptide display vector fth1, complete genome Length = 8233 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 5046 ccagcaaaatcaccagtagcacca 5023
>dbj|AK076349.1| Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched library, clone:4732456B05 product:zinc finger protein 113, full insert sequence Length = 3542 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 320 tcagcaggagctccaccctt 339 |||||||||||||||||||| Sbjct: 1145 tcagcaggagctccaccctt 1164
>gb|DQ062691.1| Cloning vector pMAB143, complete sequence Length = 4861 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 1388 ccagcaaaatcaccagtagcacca 1365
>gb|AY093584.1| Cloning Vector pBANF-bar, complete sequence Length = 6761 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 2150 ccagcaaaatcaccagtagcacca 2127
>gb|AY995145.1| Binary vector pBin19 35S attR-YFP, complete sequence Length = 16537 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 11935 ccagcaaaatcaccagtagcacca 11958
>gb|AY995144.1| Binary vector pBin19 35S YFP-attR, complete sequence Length = 16662 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 12060 ccagcaaaatcaccagtagcacca 12083
>gb|AC107016.20| Homo sapiens 12 BAC RP11-153F5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 191947 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 257 ccaccgccgcctccacggccaaag 280 |||||||||||||| ||||||||| Sbjct: 181371 ccaccgccgcctccccggccaaag 181348
>gb|U12639.1|PBI101TD GUS gene fusion vector pBI101 T-DNA region Length = 5349 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 2150 ccagcaaaatcaccagtagcacca 2127
>gb|AF268280.1|AF268280 Phagemid cloning vector pComb3H, complete sequence Length = 3394 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 714 ccagcaaaatcaccagtagcacca 691
>gb|AF246456.1|AF246456 Synthetic construct clone f88-LX6 recombinant major coat protein rpVIII-LX6 precursor, gene, complete cds Length = 9264 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 2594 ccagcaaaatcaccagtagcacca 2571
>gb|AF246455.1|AF246455 Synthetic construct clone f88-Cys6 recombinant major coat protein rpVIII-Cys6 precursor, gene, complete cds Length = 9279 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 2594 ccagcaaaatcaccagtagcacca 2571
>gb|AF246454.1|AF246454 Synthetic construct clone f88-Cys5 recombinant major coat protein rpVIII-Cys5 precursor, gene, complete cds Length = 9276 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 2594 ccagcaaaatcaccagtagcacca 2571
>gb|AF246453.1|AF246453 Synthetic construct clone f88-Cys4 recombinant major coat protein rpVIII-Cys4 precursor, gene, complete cds Length = 9273 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 2594 ccagcaaaatcaccagtagcacca 2571
>gb|AF246452.1|AF246452 Synthetic construct clone f88-Cys3 recombinant major coat protein rpVIII-Cys3 precursor, gene, complete cds Length = 9273 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 2594 ccagcaaaatcaccagtagcacca 2571
>gb|AF246451.1|AF246451 Synthetic construct clone f88-Cys2 recombinant major coat protein rpVIII-Cys2 precursor, gene, complete cds Length = 9273 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 2594 ccagcaaaatcaccagtagcacca 2571
>gb|AF246450.1|AF246450 Synthetic construct clone f88-Cys1 recombinant major coat protein rpVIII-Cys1 precursor, gene, complete cds Length = 9270 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 2594 ccagcaaaatcaccagtagcacca 2571
>gb|AF246449.1|AF246449 Synthetic construct clone f88-Cys0 recombinant major coat protein rpVIII-Cys0 precursor, gene, complete cds Length = 9267 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 2594 ccagcaaaatcaccagtagcacca 2571
>gb|AF246448.1|AF246448 Synthetic construct clone f88-15mer recombinant major coat protein rpVIII-15mer precursor, gene, complete cds Length = 9273 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 2594 ccagcaaaatcaccagtagcacca 2571
>gb|AF246447.1|AF246447 Synthetic construct clone f8-8mer recombinant major coat protein rpVIII-8mer precursor, gene, complete cds Length = 9198 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 2609 ccagcaaaatcaccagtagcacca 2586
>gb|AF246446.1|AF246446 Synthetic construct clone f3-6mer recombinant adsoprtion protein rpIII-6mer precursor, gene, complete cds Length = 9225 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 2636 ccagcaaaatcaccagtagcacca 2613
>gb|AF246445.1|AF246445 Synthetic construct clone f3-15mer recombinant adsorption protein rpIII-15mer precursor, gene, complete cds Length = 9252 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 2663 ccagcaaaatcaccagtagcacca 2640
>gb|AF218734.1|AF218734 Filamentous phage display vector f8-1, complete sequence Length = 9183 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 2594 ccagcaaaatcaccagtagcacca 2571
>gb|AF218733.1|AF218733 Filamentous phage display vector fMCS1, complete sequence Length = 8879 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 2594 ccagcaaaatcaccagtagcacca 2571
>gb|AF218364.1|AF218364 Filamentous phage display vector fUSE5, complete sequence Length = 9206 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 2617 ccagcaaaatcaccagtagcacca 2594
>gb|AF218363.1|AF218363 Filamentous phage display vector f88-4, complete sequence Length = 9234 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 2594 ccagcaaaatcaccagtagcacca 2571
>gb|AY456412.1| Cloning vector pZGA22, complete sequence Length = 14701 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 4603 ccagcaaaatcaccagtagcacca 4580
>dbj|AB158265.1| Cloning vector TFV5 gene for M13 pIII, partial cds Length = 6470 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 5523 ccagcaaaatcaccagtagcacca 5500
>dbj|AB158264.1| Cloning vector TFV4 gene for M13 pIII, partial cds Length = 6470 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 5523 ccagcaaaatcaccagtagcacca 5500
>dbj|AB158263.1| Cloning vector TFV3 gene for M13 pIII, partial cds Length = 5935 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 4988 ccagcaaaatcaccagtagcacca 4965
>gb|M77690.1|SYNPUC9CPL M13mp9/pUC9 cloning vector Length = 7599 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 2594 ccagcaaaatcaccagtagcacca 2571
>gb|M77689.1|SYNPUC8CPL M13mp8/pUC8 cloning vector Length = 7229 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 2594 ccagcaaaatcaccagtagcacca 2571
>gb|AY754024.1| Phagemid vector pMID21, complete sequence Length = 5960 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 4811 ccagcaaaatcaccagtagcacca 4788
>gb|AY754023.1| Enterobacteria phage M13 vector DY3F63, complete sequence Length = 9030 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 2594 ccagcaaaatcaccagtagcacca 2571
>emb|AL450109.3|CNS07EEV Human chromosome 14 DNA sequence BAC R-477I16 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 171997 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 288 caccaccagcacccctgaaa 307 |||||||||||||||||||| Sbjct: 132794 caccaccagcacccctgaaa 132775
>gb|AF217317.1| Filamentous phage cloning vector fd-tet, complete sequence Length = 9183 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 2594 ccagcaaaatcaccagtagcacca 2571
>emb|BX004780.4| Zebrafish DNA sequence from clone CH211-202P1 in linkage group 20, complete sequence Length = 188317 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 tgaaagctggctggtagtca 322 |||||||||||||||||||| Sbjct: 37323 tgaaagctggctggtagtca 37304
>gb|L08820.1|SYNM13M11V M13mp11 phage cloning vector Length = 7244 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 2594 ccagcaaaatcaccagtagcacca 2571
>gb|DQ320121.1| Binary vector pBINPLUS/ARS, complete sequence Length = 12460 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 9238 ccagcaaaatcaccagtagcacca 9215
>gb|AF054625.1|AF054625 Reporter vector pSRF-Luc, complete sequence Length = 3732 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 980 ccagcaaaatcaccagtagcacca 1003
>emb|AL161751.3|CNS01RHG Human chromosome 14 DNA sequence BAC R-96D24 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 184692 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 288 caccaccagcacccctgaaa 307 |||||||||||||||||||| Sbjct: 36078 caccaccagcacccctgaaa 36059
>dbj|D50401.1|SYNPPDSZ Unidentified cloning vector Phagemid pPDS DNA for fusion protein of murine immunoglobulin kappa chain constant region and the carboxy-terminal half of coat protein III of M13mp18 Length = 3837 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 924 ccagcaaaatcaccagtagcacca 947
>emb|X84307.1|ASVPSKAN8 Artificial sequences circular phagemid display vector pSKAN8 Length = 5635 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 1178 ccagcaaaatcaccagtagcacca 1155
>emb|Y14584.1|ASY14584 Artificial sequence; vector pSEX81-215(Yol) Length = 4864 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 4491 ccagcaaaatcaccagtagcacca 4468
>emb|X82190.1|PSEX100 Phagemid pSEX100-phOx DNA Length = 5476 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 4501 ccagcaaaatcaccagtagcacca 4478
>emb|X77672.1|ADSPTV Artificial DNA sequence for plant transformation vector Length = 3214 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 1066 ccagcaaaatcaccagtagcacca 1089
>emb|X02513.1|M13MP18 Cloning vector M13mp18 Length = 7249 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 2593 ccagcaaaatcaccagtagcacca 2570
>dbj|AB096107.1| Cloning vector pFCAH9-E8d gene for cp3 half molecule, protein A doublet Length = 2321 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 1633 ccagcaaaatcaccagtagcacca 1610
>dbj|AB096106.1| Cloning vector pscFvCA-E8VHd gene for cp3 half molecule, protein A doblet Length = 1600 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 1086 ccagcaaaatcaccagtagcacca 1063
>gb|U12638.1|PDGUSBTD Promoter-trapping vector pdeltagusBin19 Length = 13911 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 3197 ccagcaaaatcaccagtagcacca 3220
>gb|U12540.1|PBIN19TD Plant transformation vector pBin19 T-DNA region Length = 3212 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 2150 ccagcaaaatcaccagtagcacca 2127
>gb|U12640.1|PBI1013T GUS gene fusion vector pBI101.3 T-DNA region Length = 5352 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 2151 ccagcaaaatcaccagtagcacca 2128
>gb|U12668.1|PBI1012T GUS gene fusion vector pBI101.2 T-DNA region Length = 5351 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 2151 ccagcaaaatcaccagtagcacca 2128
>gb|AY842154.1| Synthetic construct Enterobacteria phage f1 isolate evolved, complete sequence Length = 7413 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 2595 ccagcaaaatcaccagtagcacca 2572
>gb|AY842153.1| Synthetic construct Enterobacteria phage f1 isolate ancestral, complete sequence Length = 7413 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 2595 ccagcaaaatcaccagtagcacca 2572
>gb|AC151719.3| Mus musculus BAC clone RP23-147H4 from chromosome 5, complete sequence Length = 221314 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 320 tcagcaggagctccaccctt 339 |||||||||||||||||||| Sbjct: 175194 tcagcaggagctccaccctt 175175
>gb|U70311.1|CVU70311 Filamentous phage display expression cloning vector pZGT5 with murine Ig kappa light chain fragment insert, complete sequence Length = 4344 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 2481 ccagcaaaatcaccagtagcacca 2458
>gb|L39947.1|SYNM13TSP3 Cloning vector M13tsp3 DNA sequence Length = 7454 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 2642 ccagcaaaatcaccagtagcacca 2619
>gb|L39946.1|SYNFNG1 Cloning vector FNG-1 DNA sequence Length = 7483 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 2671 ccagcaaaatcaccagtagcacca 2648
>gb|L42764.1|STAFRA Staphylococcus aureus (clone pS120+) DNA fragment Length = 5885 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 1177 ccagcaaaatcaccagtagcacca 1154
>gb|L08833.1|SYNTG131V M13tg131 phage cloning vector Length = 7265 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 2594 ccagcaaaatcaccagtagcacca 2571
>gb|L08828.1|SYNTG130V M13tg130 phage cloning vector Length = 7265 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 2594 ccagcaaaatcaccagtagcacca 2571
>gb|L08874.1|SYNPHSCSKV PhageScript SK cloning vector Length = 7372 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 2594 ccagcaaaatcaccagtagcacca 2571
>gb|L08837.1|SYNMWB23V mWB23 phage cloning vector Length = 6867 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 2594 ccagcaaaatcaccagtagcacca 2571
>gb|L08851.1|SYNMWB2344 mWB2344 phage cloning vector Length = 6940 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 2594 ccagcaaaatcaccagtagcacca 2571
>gb|L08836.1|SYNMIC7V M13mIC7 phage cloning vector Length = 7232 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 2594 ccagcaaaatcaccagtagcacca 2571
>gb|L08846.1|SYNMBW2342 mWB2342 phage cloning vector Length = 6871 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 2594 ccagcaaaatcaccagtagcacca 2571
>gb|M77827.1|SYNM13MP9V M13mp9 phage cloning vector Length = 7599 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 2594 ccagcaaaatcaccagtagcacca 2571
>gb|M77669.1|SYNM13MP7V M13mp7 phage cloning vector Length = 7238 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 2594 ccagcaaaatcaccagtagcacca 2571
>gb|L08818.1|SYNM13MP2V M13mp2 phage cloning vector Length = 7196 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 2594 ccagcaaaatcaccagtagcacca 2571
>gb|L08813.1|SYNM13MP1V M13mp1 phage cloning vector Length = 7196 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 2594 ccagcaaaatcaccagtagcacca 2571
>gb|L08821.1|SYNM13M19V M13mp19 phage cloning vector Length = 7250 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 2594 ccagcaaaatcaccagtagcacca 2571
>gb|L08819.1|SYNM13M10V M13mp10 phage cloning vector Length = 7244 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 2594 ccagcaaaatcaccagtagcacca 2571
>gb|J02448.1|F1CCG Bacteriophage f1, complete genome Length = 6407 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 2594 ccagcaaaatcaccagtagcacca 2571
>gb|M77815.1|SYNM13M18V M13mp18 phage cloning vector Length = 7250 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 ccagcaaaatcaccaggagcacca 367 |||||||||||||||| ||||||| Sbjct: 2594 ccagcaaaatcaccagtagcacca 2571 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,453,948 Number of Sequences: 3902068 Number of extensions: 5453948 Number of successful extensions: 108950 Number of sequences better than 10.0: 213 Number of HSP's better than 10.0 without gapping: 213 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 108418 Number of HSP's gapped (non-prelim): 510 length of query: 697 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 674 effective length of database: 17,143,297,704 effective search space: 11554582652496 effective search space used: 11554582652496 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)