ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags30h17 |
|---|---|
| Clone Library Name | barley_pub |
>gb|U76261.1|HVU76261 Hordeum vulgare highly repeated, retrotransposon-like sequence Length = 5050 Score = 48.1 bits (24), Expect = 0.035 Identities = 27/28 (96%) Strand = Plus / Minus Query: 27 ctgatatttgcacaggttacaaaacata 54 ||||||||||||||| |||||||||||| Sbjct: 2172 ctgatatttgcacagattacaaaacata 2145
>gb|AC115031.11| Mus musculus chromosome 3, clone RP24-257J5, complete sequence Length = 170460 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 131 aaacaaaacatgtagacatattt 153 ||||||||||||||||||||||| Sbjct: 90010 aaacaaaacatgtagacatattt 90032
>gb|AC118676.6| Mus musculus chromosome 7, clone RP24-178N18, complete sequence Length = 149930 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 298 ccctgaacgtaaagctccttt 318 ||||||||||||||||||||| Sbjct: 142616 ccctgaacgtaaagctccttt 142636
>gb|AY491681.1| Triticum monococcum DV92 BAC 109N23, complete sequence Length = 101101 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 54 actagatcatgaaaggcgcgcgttgccacgccc 86 ||||||||||| | ||||||||||||| ||||| Sbjct: 73207 actagatcatggatggcgcgcgttgccgcgccc 73175
>gb|AE017244.1| Mycoplasma hyopneumoniae 7448, complete genome Length = 920079 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 148 atatttgtaaaaattttggtcagta 172 |||||| |||||||||||||||||| Sbjct: 596923 atatttttaaaaattttggtcagta 596899
>gb|AE017243.1| Mycoplasma hyopneumoniae J, complete genome Length = 897405 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 148 atatttgtaaaaattttggtcagta 172 |||||| |||||||||||||||||| Sbjct: 573645 atatttttaaaaattttggtcagta 573621
>gb|AC006007.1| Homo sapiens PAC clone RP5-819O4 from 7, complete sequence Length = 124293 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 115 atttgtaaatatatagaaaca 135 ||||||||||||||||||||| Sbjct: 67825 atttgtaaatatatagaaaca 67845
>gb|AF203550.1|AF203550 Stylosanthes hamata from Cuba small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence Length = 634 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 gccgccccctcccctcccgtc 404 ||||||||||||||||||||| Sbjct: 402 gccgccccctcccctcccgtc 422
>emb|AJ320382.1|SSC320382 Stylosanthes scabra 5.8S rRNA gene, internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2) specimen voucher CIATFOR 10645 (BR) Length = 582 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 gccgccccctcccctcccgtc 404 ||||||||||||||||||||| Sbjct: 368 gccgccccctcccctcccgtc 388
>emb|AJ320324.1|SHU320324 Stylosanthes humilis 5.8S rRNA gene, internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2) specimen voucher Gama L. 180 (IZTA) Length = 579 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 gccgccccctcccctcccgtc 404 ||||||||||||||||||||| Sbjct: 365 gccgccccctcccctcccgtc 385
>emb|AJ320292.1|SCA320292 Stylosanthes cayennensis 5.8S rRNA gene, internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2) specimen voucher Broadway 972 (GH) Length = 579 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 gccgccccctcccctcccgtc 404 ||||||||||||||||||||| Sbjct: 365 gccgccccctcccctcccgtc 385
>emb|AJ320393.1|STU320393 Stylosanthes tuberculata 5.8S rRNA gene, internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2) specimen voucher CPI 100452 (BR) Length = 582 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 gccgccccctcccctcccgtc 404 ||||||||||||||||||||| Sbjct: 368 gccgccccctcccctcccgtc 388
>emb|AJ320392.1|STU320392 Stylosanthes tuberculata 5.8S rRNA gene, internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2) specimen voucher Britton 3336 (F) Length = 582 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 gccgccccctcccctcccgtc 404 ||||||||||||||||||||| Sbjct: 368 gccgccccctcccctcccgtc 388
>emb|AJ320391.1|SSY320391 Stylosanthes sympodialis 5.8S rRNA gene, internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2) specimen voucher CIATFOR 1634 (BR) Length = 579 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 gccgccccctcccctcccgtc 404 ||||||||||||||||||||| Sbjct: 365 gccgccccctcccctcccgtc 385
>emb|AJ320390.1|SSY320390 Stylosanthes sympodialis 5.8S rRNA gene, internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2) specimen voucher Asplund 15976 (NY) Length = 579 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 gccgccccctcccctcccgtc 404 ||||||||||||||||||||| Sbjct: 365 gccgccccctcccctcccgtc 385
>emb|AJ320389.1|SSU320389 Stylosanthes sundaica 5.8S rRNA gene, internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2) specimen voucher CPI 47477 Length = 579 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 gccgccccctcccctcccgtc 404 ||||||||||||||||||||| Sbjct: 365 gccgccccctcccctcccgtc 385
>emb|AJ320388.1|SSU320388 Stylosanthes subsericea 5.8S rRNA gene, internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2) specimen voucher Purpus 7152 (F) Length = 582 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 gccgccccctcccctcccgtc 404 ||||||||||||||||||||| Sbjct: 368 gccgccccctcccctcccgtc 388
>emb|AJ320387.1|SSU320387 Stylosanthes subsericea 5.8S rRNA gene, internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2) specimen voucher Williams 11261 (MEXU) Length = 582 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 gccgccccctcccctcccgtc 404 ||||||||||||||||||||| Sbjct: 368 gccgccccctcccctcccgtc 388
>emb|AJ320386.1|SSE320386 Stylosanthes sericeiceps 5.8S rRNA gene, internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2) specimen voucher Breteler 4070 (NY) Length = 582 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 gccgccccctcccctcccgtc 404 ||||||||||||||||||||| Sbjct: 368 gccgccccctcccctcccgtc 388
>emb|AJ320385.1|SSE320385 Stylosanthes sericeiceps 5.8S rRNA gene, internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2) specimen voucher Jahn 678 (GH) Length = 582 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 gccgccccctcccctcccgtc 404 ||||||||||||||||||||| Sbjct: 368 gccgccccctcccctcccgtc 388
>emb|AJ320383.1|SSC320383 Stylosanthes scabra 5.8S rRNA gene, internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2) specimen voucher Jahn 169 (NY) Length = 582 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 gccgccccctcccctcccgtc 404 ||||||||||||||||||||| Sbjct: 368 gccgccccctcccctcccgtc 388
>emb|AJ320381.1|SSC320381 Stylosanthes scabra 5.8S rRNA gene, internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2) specimen voucher CIATFOR 1368 (BR) Length = 582 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 gccgccccctcccctcccgtc 404 ||||||||||||||||||||| Sbjct: 368 gccgccccctcccctcccgtc 388
>emb|AJ320380.1|SSC320380 Stylosanthes scabra 5.8S rRNA gene, internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2) specimen voucher Ehrich 290 (NY) Length = 582 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 gccgccccctcccctcccgtc 404 ||||||||||||||||||||| Sbjct: 368 gccgccccctcccctcccgtc 388
>emb|AJ320379.1|SSC320379 Stylosanthes scabra 5.8S rRNA gene, internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2) specimen voucher Lima 189 (NY) Length = 582 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 gccgccccctcccctcccgtc 404 ||||||||||||||||||||| Sbjct: 368 gccgccccctcccctcccgtc 388
>emb|AJ320378.1|SSC320378 Stylosanthes scabra 5.8S rRNA gene, internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2) specimen voucher Belem 2027 (NY) Length = 582 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 gccgccccctcccctcccgtc 404 ||||||||||||||||||||| Sbjct: 368 gccgccccctcccctcccgtc 388
>emb|AJ320377.1|SPI320377 Stylosanthes pilosa 5.8S rRNA gene, internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2) specimen voucher CIATFOR 2129 (BR) Length = 578 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 gccgccccctcccctcccgtc 404 ||||||||||||||||||||| Sbjct: 364 gccgccccctcccctcccgtc 384
>emb|AJ320376.1|SPI320376 Stylosanthes pilosa 5.8S rRNA gene, internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2) specimen voucher Coradin 6280 (NY) Length = 583 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 gccgccccctcccctcccgtc 404 ||||||||||||||||||||| Sbjct: 368 gccgccccctcccctcccgtc 388
>emb|AJ320375.1|SME320375 Stylosanthes mexicana 5.8S rRNA gene, internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2) specimen voucher Pittier 9679 (NY) Length = 582 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 gccgccccctcccctcccgtc 404 ||||||||||||||||||||| Sbjct: 368 gccgccccctcccctcccgtc 388
>emb|AJ320374.1|SME320374 Stylosanthes mexicana 5.8S rRNA gene, internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2) specimen voucher Bang 936 (GH) Length = 582 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 gccgccccctcccctcccgtc 404 ||||||||||||||||||||| Sbjct: 368 gccgccccctcccctcccgtc 388
>emb|AJ320367.1|SLI320367 Stylosanthes linearifolia 5.8S rRNA gene, internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2) specimen voucher Hatschbach 33374 (NY) Length = 579 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 gccgccccctcccctcccgtc 404 ||||||||||||||||||||| Sbjct: 365 gccgccccctcccctcccgtc 385
>emb|AJ320366.1|SHA320366 Stylosanthes hamata 5.8S rRNA gene, internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2) specimen voucher Blake 7792 (GH) Length = 582 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 gccgccccctcccctcccgtc 404 ||||||||||||||||||||| Sbjct: 368 gccgccccctcccctcccgtc 388
>emb|AJ320365.1|SHA320365 Stylosanthes hamata 5.8S rRNA gene, internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2) specimen voucher CPI 38842 (BR) Length = 579 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 gccgccccctcccctcccgtc 404 ||||||||||||||||||||| Sbjct: 365 gccgccccctcccctcccgtc 385
>emb|AJ320364.1|SHA320364 Stylosanthes hamata 5.8S rRNA gene, internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2) specimen voucher Gama L. 136 (IZTA) Length = 579 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 gccgccccctcccctcccgtc 404 ||||||||||||||||||||| Sbjct: 365 gccgccccctcccctcccgtc 385
>emb|AJ320363.1|SHA320363 Stylosanthes hamata 5.8S rRNA gene, internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2) specimen voucher Kirkbride 2475 (US) Length = 579 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 gccgccccctcccctcccgtc 404 ||||||||||||||||||||| Sbjct: 365 gccgccccctcccctcccgtc 385
>emb|AJ320362.1|SHA320362 Stylosanthes hamata 5.8S rRNA gene, internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2) specimen voucher CPI 55822 (BR) Length = 579 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 gccgccccctcccctcccgtc 404 ||||||||||||||||||||| Sbjct: 365 gccgccccctcccctcccgtc 385
>emb|AJ320361.1|SHA320361 Stylosanthes hamata 5.8S rRNA gene, internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2) specimen voucher Tamayo 3776 (NY) Length = 579 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 gccgccccctcccctcccgtc 404 ||||||||||||||||||||| Sbjct: 365 gccgccccctcccctcccgtc 385
>emb|AJ320360.1|SHA320360 Stylosanthes hamata 5.8S rRNA gene, internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2) specimen voucher Standley 25126 (US) Length = 579 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 gccgccccctcccctcccgtc 404 ||||||||||||||||||||| Sbjct: 365 gccgccccctcccctcccgtc 385
>emb|AJ320359.1|SHA320359 Stylosanthes hamata 5.8S rRNA gene, internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2) specimen voucher Killip 45007 (US) Length = 579 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 gccgccccctcccctcccgtc 404 ||||||||||||||||||||| Sbjct: 365 gccgccccctcccctcccgtc 385
>emb|AJ320358.1|SHA320358 Stylosanthes hamata 5.8S rRNA gene, internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2) specimen voucher Correll 46279 (NY) Length = 579 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 gccgccccctcccctcccgtc 404 ||||||||||||||||||||| Sbjct: 365 gccgccccctcccctcccgtc 385
>emb|AJ320357.1|SHA320357 Stylosanthes hamata 5.8S rRNA gene, internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2) specimen voucher Sintenis 1092 (MO) Length = 579 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 gccgccccctcccctcccgtc 404 ||||||||||||||||||||| Sbjct: 365 gccgccccctcccctcccgtc 385
>emb|AJ320356.1|SFR320356 Stylosanthes fruticosa 5.8S rRNA gene, internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2) specimen voucher CPI 60354 (BR) Length = 582 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 gccgccccctcccctcccgtc 404 ||||||||||||||||||||| Sbjct: 368 gccgccccctcccctcccgtc 388
>emb|AJ320355.1|SFR320355 Stylosanthes fruticosa 5.8S rRNA gene, internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2) specimen voucher CPI 50979 (BR) Length = 582 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 gccgccccctcccctcccgtc 404 ||||||||||||||||||||| Sbjct: 368 gccgccccctcccctcccgtc 388
>emb|AJ320354.1|SFR320354 Stylosanthes fruticosa 5.8S rRNA gene, internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2) specimen voucher Huntley 2069 (MO) Length = 582 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 gccgccccctcccctcccgtc 404 ||||||||||||||||||||| Sbjct: 368 gccgccccctcccctcccgtc 388
>emb|AJ320353.1|SFR320353 Stylosanthes fruticosa 5.8S rRNA gene, internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2) specimen voucher CPI 79070 (BR) Length = 582 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 gccgccccctcccctcccgtc 404 ||||||||||||||||||||| Sbjct: 368 gccgccccctcccctcccgtc 388
>emb|AJ320352.1|SER320352 Stylosanthes erecta 5.8S rRNA gene, internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2) specimen voucher De Wilde 790 (MO) Length = 582 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 gccgccccctcccctcccgtc 404 ||||||||||||||||||||| Sbjct: 368 gccgccccctcccctcccgtc 388
>emb|AJ320351.1|SER320351 Stylosanthes erecta 5.8S rRNA gene, internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2) specimen voucher Reitsma 685 (NY) Length = 582 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 gccgccccctcccctcccgtc 404 ||||||||||||||||||||| Sbjct: 368 gccgccccctcccctcccgtc 388
>emb|AJ320346.1|SBR320346 Stylosanthes bracteata 5.8S rRNA gene, internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2) specimen voucher Callejas 1962 (NY) Length = 579 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 gccgccccctcccctcccgtc 404 ||||||||||||||||||||| Sbjct: 365 gccgccccctcccctcccgtc 385
>emb|AJ320345.1|SVI320345 Stylosanthes viscosa 5.8S rRNA gene, internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2) specimen voucher CPI 34904 (BR) Length = 582 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 gccgccccctcccctcccgtc 404 ||||||||||||||||||||| Sbjct: 368 gccgccccctcccctcccgtc 388
>emb|AJ320344.1|SVI320344 Stylosanthes viscosa 5.8S rRNA gene, internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2) specimen voucher CIATFOR 10310 (BR) Length = 582 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 gccgccccctcccctcccgtc 404 ||||||||||||||||||||| Sbjct: 368 gccgccccctcccctcccgtc 388
>emb|AJ320343.1|SVI320343 Stylosanthes viscosa 5.8S rRNA gene, internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2) specimen voucher CIATFOR 2341 Length = 582 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 gccgccccctcccctcccgtc 404 ||||||||||||||||||||| Sbjct: 368 gccgccccctcccctcccgtc 388
>emb|AJ320342.1|SVI320342 Stylosanthes viscosa 5.8S rRNA gene, internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2) specimen voucher CIATFOR 2773 Length = 582 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 gccgccccctcccctcccgtc 404 ||||||||||||||||||||| Sbjct: 368 gccgccccctcccctcccgtc 388
>emb|AJ320341.1|SVI320341 Stylosanthes viscosa 5.8S rRNA gene, internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2) specimen voucher CIATFOR 11091 Length = 582 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 gccgccccctcccctcccgtc 404 ||||||||||||||||||||| Sbjct: 368 gccgccccctcccctcccgtc 388
>emb|AJ320340.1|SVI320340 Stylosanthes viscosa 5.8S rRNA gene, internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2) specimen voucher Howard 5534 (GH) Length = 582 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 gccgccccctcccctcccgtc 404 ||||||||||||||||||||| Sbjct: 368 gccgccccctcccctcccgtc 388
>emb|AJ320339.1|SVI320339 Stylosanthes viscosa 5.8S rRNA gene, internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2) specimen voucher CIATFOR 1593 (BR) Length = 582 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 gccgccccctcccctcccgtc 404 ||||||||||||||||||||| Sbjct: 368 gccgccccctcccctcccgtc 388
>emb|AJ320338.1|SVI320338 Stylosanthes viscosa 5.8S rRNA gene, internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2) specimen voucher Gama L. 135 (IZTA) Length = 582 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 gccgccccctcccctcccgtc 404 ||||||||||||||||||||| Sbjct: 368 gccgccccctcccctcccgtc 388
>emb|AJ320337.1|STO320337 Stylosanthes tomentosa 5.8S rRNA gene, internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2) specimen voucher CPI 92843 (BR) Length = 578 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 gccgccccctcccctcccgtc 404 ||||||||||||||||||||| Sbjct: 365 gccgccccctcccctcccgtc 385
>emb|AJ320332.1|SLE320332 Stylosanthes leiocarpa 5.8S rRNA gene, internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2) specimen voucher CPI 78192 (BR) Length = 584 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 gccgccccctcccctcccgtc 404 ||||||||||||||||||||| Sbjct: 365 gccgccccctcccctcccgtc 385
>emb|AJ320331.1|SLE320331 Stylosanthes leiocarpa 5.8S rRNA gene, internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2) specimen voucher CPI 36258 (BR) Length = 584 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 gccgccccctcccctcccgtc 404 ||||||||||||||||||||| Sbjct: 365 gccgccccctcccctcccgtc 385
>emb|AJ320330.1|SLE320330 Stylosanthes leiocarpa 5.8S rRNA gene, internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2) specimen voucher CIATFOR 2167 (BR) Length = 579 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 gccgccccctcccctcccgtc 404 ||||||||||||||||||||| Sbjct: 365 gccgccccctcccctcccgtc 385
>emb|AJ320329.1|SIN320329 Stylosanthes ingrata 5.8S rRNA gene, internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2) specimen voucher Record SN (US) Length = 582 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 gccgccccctcccctcccgtc 404 ||||||||||||||||||||| Sbjct: 368 gccgccccctcccctcccgtc 388
>emb|AJ320328.1|SHI320328 Stylosanthes hispida 5.8S rRNA gene, internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2) specimen voucher Egler 47648 (NY) Length = 579 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 gccgccccctcccctcccgtc 404 ||||||||||||||||||||| Sbjct: 365 gccgccccctcccctcccgtc 385
>emb|AJ320327.1|SHU320327 Stylosanthes humilis 5.8S rRNA gene, internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2) specimen voucher Heyde 4162 (US) Length = 579 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 gccgccccctcccctcccgtc 404 ||||||||||||||||||||| Sbjct: 365 gccgccccctcccctcccgtc 385
>emb|AJ320326.1|SHU320326 Stylosanthes humilis 5.8S rRNA gene, internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2) specimen voucher Casco-Varela 32 (MO) Length = 579 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 gccgccccctcccctcccgtc 404 ||||||||||||||||||||| Sbjct: 365 gccgccccctcccctcccgtc 385
>emb|AJ320325.1|SHU320325 Stylosanthes humilis 5.8S rRNA gene, internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2) specimen voucher Gama L. 231 (IZTA) Length = 579 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 gccgccccctcccctcccgtc 404 ||||||||||||||||||||| Sbjct: 365 gccgccccctcccctcccgtc 385
>emb|AJ320323.1|SHU320323 Stylosanthes humilis 5.8S rRNA gene, internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2) specimen voucher CPI 40266 (BR) Length = 579 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 gccgccccctcccctcccgtc 404 ||||||||||||||||||||| Sbjct: 365 gccgccccctcccctcccgtc 385
>emb|AJ320322.1|SHU320322 Stylosanthes humilis 5.8S rRNA gene, internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2) specimen voucher CIATFOR 2334 (BR) Length = 579 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 gccgccccctcccctcccgtc 404 ||||||||||||||||||||| Sbjct: 365 gccgccccctcccctcccgtc 385
>emb|AJ320321.1|SHU320321 Stylosanthes humilis 5.8S rRNA gene, internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2) specimen voucher CPI 61674 (BR) Length = 579 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 gccgccccctcccctcccgtc 404 ||||||||||||||||||||| Sbjct: 365 gccgccccctcccctcccgtc 385
>emb|AJ320320.1|SHU320320 Stylosanthes humilis 5.8S rRNA gene, internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2) specimen voucher CIATFOR 1363 (BR) Length = 579 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 gccgccccctcccctcccgtc 404 ||||||||||||||||||||| Sbjct: 365 gccgccccctcccctcccgtc 385
>emb|AJ320319.1|SHU320319 Stylosanthes humilis 5.8S rRNA gene, internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2) specimen voucher Pittier 4983 (US) Length = 579 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 gccgccccctcccctcccgtc 404 ||||||||||||||||||||| Sbjct: 365 gccgccccctcccctcccgtc 385
>emb|AJ320318.1|SHU320318 Stylosanthes humilis 5.8S rRNA gene, internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2) specimen voucher MacKee 11171 (US) Length = 579 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 gccgccccctcccctcccgtc 404 ||||||||||||||||||||| Sbjct: 365 gccgccccctcccctcccgtc 385
>emb|AJ320289.1|SBI320289 Stylosanthes biflora 5.8S rRNA gene, internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2) specimen voucher Godfrey 4632 (US) Length = 586 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 gccgccccctcccctcccgtc 404 ||||||||||||||||||||| Sbjct: 372 gccgccccctcccctcccgtc 392
>emb|AJ320288.1|SBI320288 Stylosanthes biflora 5.8S rRNA gene, internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2) specimen voucher Nash 1848 (US) Length = 586 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 gccgccccctcccctcccgtc 404 ||||||||||||||||||||| Sbjct: 372 gccgccccctcccctcccgtc 392
>emb|AJ320284.1|SAN320284 Stylosanthes angustifolia 5.8S rRNA gene, internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2) specimen voucher CPI 33433 (BR) Length = 579 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 gccgccccctcccctcccgtc 404 ||||||||||||||||||||| Sbjct: 365 gccgccccctcccctcccgtc 385
>emb|AJ320283.1|SAN320283 Stylosanthes angustifolia 5.8S rRNA gene, internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2) specimen voucher CPI 40236 (BR) Length = 579 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 gccgccccctcccctcccgtc 404 ||||||||||||||||||||| Sbjct: 365 gccgccccctcccctcccgtc 385
>gb|AE017332.1| Mycoplasma hyopneumoniae 232, complete genome Length = 892758 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 148 atatttgtaaaaattttggtcagta 172 |||||| |||||||||||||||||| Sbjct: 561826 atatttttaaaaattttggtcagta 561802
>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome Length = 5411809 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 87 atccattttaaaaatggattg 107 ||||||||||||||||||||| Sbjct: 2818054 atccattttaaaaatggattg 2818074
>gb|AC107371.17| Mus musculus chromosome 7, clone RP24-66D2, complete sequence Length = 214373 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 298 ccctgaacgtaaagctccttt 318 ||||||||||||||||||||| Sbjct: 83992 ccctgaacgtaaagctccttt 84012
>gb|AF000429.1|AF000429 Shuttle cosmid vector pFD666, complete sequence Length = 5251 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 441 tcggcggcggacaacttcgtc 461 ||||||||||||||||||||| Sbjct: 4794 tcggcggcggacaacttcgtc 4814
>gb|U23762.1|SPU23762 Streptomyces phaeochromogenes plasmid pJV1, complete sequence Length = 11143 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 441 tcggcggcggacaacttcgtc 461 ||||||||||||||||||||| Sbjct: 5099 tcggcggcggacaacttcgtc 5119
>emb|AJ416316.1|ST416316 Stylosanthes aff. calcicola JVS-2001 5.8S rRNA gene, internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2), specimen voucher Cabrera-C 4399 (MEXU) Length = 580 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 gccgccccctcccctcccgtc 404 ||||||||||||||||||||| Sbjct: 366 gccgccccctcccctcccgtc 386
>emb|AJ416315.1|ST416315 Stylosanthes aff. calcicola JVS-2001 5.8S rRNA gene, internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2), specimen voucher Duran 729 (MEXU) Length = 580 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 gccgccccctcccctcccgtc 404 ||||||||||||||||||||| Sbjct: 366 gccgccccctcccctcccgtc 386
>emb|AJ416314.1|ST416314 Stylosanthes aff. calcicola JVS-2001 5.8S rRNA gene, internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2), specimen voucher Villanueva 496 (MEXU) Length = 580 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 gccgccccctcccctcccgtc 404 ||||||||||||||||||||| Sbjct: 366 gccgccccctcccctcccgtc 386
>emb|AJ416313.1|ST416313 Stylosanthes aff. calcicola JVS-2001 5.8S rRNA gene, internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2), specimen voucher Villanueva 435 (MEXU) Length = 580 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 gccgccccctcccctcccgtc 404 ||||||||||||||||||||| Sbjct: 366 gccgccccctcccctcccgtc 386
>emb|AJ416312.1|ST416312 Stylosanthes aff. calcicola JVS-2001 5.8S rRNA gene, internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2), specimen voucher Duran 243 (MEXU) Length = 580 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 gccgccccctcccctcccgtc 404 ||||||||||||||||||||| Sbjct: 366 gccgccccctcccctcccgtc 386
>emb|AJ416311.1|ST416311 Stylosanthes aff. calcicola JVS-2001 5.8S rRNA gene, internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2), specimen voucher Gama-Lopez 254 (IZTA) Length = 580 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 gccgccccctcccctcccgtc 404 ||||||||||||||||||||| Sbjct: 366 gccgccccctcccctcccgtc 386
>gb|AC126403.7| Mus musculus chromosome 15, clone RP24-483E7, complete sequence Length = 152384 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 aaacaaaacatgtagacata 150 |||||||||||||||||||| Sbjct: 39514 aaacaaaacatgtagacata 39533
>gb|AY100533.1| Uncultured bacterium clone cvf74038 16S ribosomal RNA gene, partial sequence Length = 686 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 337 gggcttgctcttcggtgtca 356 |||||||||||||||||||| Sbjct: 51 gggcttgctcttcggtgtca 70
>gb|AY555590.1| Uncultured alpha proteobacterium clone Alph-16 16S ribosomal RNA gene, partial sequence Length = 508 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 337 gggcttgctcttcggtgtca 356 |||||||||||||||||||| Sbjct: 110 gggcttgctcttcggtgtca 129
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 364 ggtgtgtgaaggaggcagtggccg 387 |||| ||||||||||||||||||| Sbjct: 13154279 ggtgggtgaaggaggcagtggccg 13154302
>ref|XM_808559.1| Trypanosoma cruzi strain CL Brener DNA primase small subunit (Tc00.1047053511809.70) partial mRNA Length = 1239 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 384 gccgccccctcccctcccgt 403 |||||||||||||||||||| Sbjct: 118 gccgccccctcccctcccgt 137
>ref|XM_737905.1| Plasmodium chabaudi chabaudi hypothetical protein (PC105961.00.0) partial mRNA Length = 485 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 139 catgtagacatatttgtaaaaatt 162 |||||| ||||||||||||||||| Sbjct: 171 catgtaaacatatttgtaaaaatt 194
>gb|AC135257.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1113A07, from chromosome 3, complete sequence Length = 151173 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 364 ggtgtgtgaaggaggcagtggccg 387 |||| ||||||||||||||||||| Sbjct: 72359 ggtgggtgaaggaggcagtggccg 72336
>gb|AC133892.9| Mus musculus chromosome 1, clone RP23-279J5, complete sequence Length = 163620 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 474 cttgtcgttgttgttgaggatcaa 497 ||||| |||||||||||||||||| Sbjct: 132564 cttgttgttgttgttgaggatcaa 132541
>gb|AY118023.1| Anopheles quadriannulatus isolate Q_CH77_G6 glucose-6-phosphate dehydrogenase (G6pd) gene, partial cds Length = 520 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 146 acatatttgtaaaaattttg 165 |||||||||||||||||||| Sbjct: 108 acatatttgtaaaaattttg 127
>gb|AY118022.1| Anopheles quadriannulatus isolate Q_SQUAD_G6 glucose-6-phosphate dehydrogenase (G6pd) gene, partial cds Length = 518 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 146 acatatttgtaaaaattttg 165 |||||||||||||||||||| Sbjct: 108 acatatttgtaaaaattttg 127
>emb|AL158211.29| Human DNA sequence from clone RP11-573G6 on chromosome 10 Contains a ribosomal protein L31 (RPL31) pseudogene, the BUP gene for BUP protein, the BMI1 gene for B lymphoma Mo-MLV insertion region (mouse) (MGC12685), the 5' end of the SPAG6 gene for sperm associated antigen 6 (pf16, MGC26276, Repro-SA-1,DKFZp434I153), the 5' end of a novel gene and seven CpG islands, complete sequence Length = 138094 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 381 gtggccgccccctcccctcc 400 |||||||||||||||||||| Sbjct: 75981 gtggccgccccctcccctcc 75962
>emb|AL138923.9| Human DNA sequence from clone RP11-397J18 on chromosome 10 Contains a RAB11B, member RAS oncogene family (H-YPT3) pseudogene, 5' end of a novel gene (FLJ33990) and one CpG island, complete sequence Length = 85322 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 atatttgtaaaaattttggt 167 |||||||||||||||||||| Sbjct: 41859 atatttgtaaaaattttggt 41878
>emb|AL031705.25|HS305C8 Human DNA sequence from clone LA16c-305C8 on chromosome 16 Contains an RPS3A (40S ribosomal protein S3A) pseudogene, part of the gene for a novel protein similar to NPTX1 (neuronal pentraxin I), the gene DFKZP434A073 or KIAA0683 and the last exon of gene KIAA0590. Contains ESTs, STSs, GSSs and eight putative CpG islands, complete sequence Length = 42569 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 373 aggaggcagtggccgccccc 392 |||||||||||||||||||| Sbjct: 27959 aggaggcagtggccgccccc 27978
>gb|DQ129317.1| Uncultured bacterium clone AKIW558 16S ribosomal RNA gene, partial sequence Length = 1426 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 337 gggcttgctcttcggtgtca 356 |||||||||||||||||||| Sbjct: 774 gggcttgctcttcggtgtca 793
>gb|DQ129305.1| Uncultured bacterium clone AKIW867 16S ribosomal RNA gene, partial sequence Length = 1455 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 424 gggcttgctcttcggtgtcg 443 |||||||||||||||||||| Sbjct: 780 gggcttgctcttcggtgtcg 799
>emb|X04658.1|CERVDNA Carnation etched ring virus (CERV) DNA Length = 7932 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 tatttgtaaatatatagaaa 133 |||||||||||||||||||| Sbjct: 6171 tatttgtaaatatatagaaa 6152
>emb|AJ853858.1| Carnation etched ring virus, complete genome, Indian isolate Length = 7924 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 tatttgtaaatatatagaaa 133 |||||||||||||||||||| Sbjct: 6163 tatttgtaaatatatagaaa 6144
>emb|CR376829.10| Zebrafish DNA sequence from clone CH211-218I18 in linkage group 8, complete sequence Length = 197983 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 121 aaatatatagaaacaaaacatgta 144 ||||||||||||| |||||||||| Sbjct: 59271 aaatatatagaaaaaaaacatgta 59294
>gb|AE006467.1| Homo sapiens 16p13.3 sequence section 6 of 8 Length = 279011 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 373 aggaggcagtggccgccccc 392 |||||||||||||||||||| Sbjct: 170222 aggaggcagtggccgccccc 170241
>emb|BX548251.5| Zebrafish DNA sequence from clone BUSM1-127I14, complete sequence Length = 115316 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 atatatagaaacaaaacatg 142 |||||||||||||||||||| Sbjct: 66893 atatatagaaacaaaacatg 66874
>gb|DQ413109.1| Uncultured bacterium clone 50 16S ribosomal RNA gene, partial sequence Length = 1415 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 424 gggcttgctcttcggtgtcg 443 |||||||||||||||||||| Sbjct: 759 gggcttgctcttcggtgtcg 778
>gb|DQ413102.1| Uncultured bacterium clone 43 16S ribosomal RNA gene, partial sequence Length = 1418 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 424 gggcttgctcttcggtgtcg 443 |||||||||||||||||||| Sbjct: 761 gggcttgctcttcggtgtcg 780
>gb|AC139021.11| Mus musculus chromosome 1, clone RP23-448C15, complete sequence Length = 166133 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 474 cttgtcgttgttgttgaggatcaa 497 ||||| |||||||||||||||||| Sbjct: 18233 cttgttgttgttgttgaggatcaa 18210
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 attttaaaaatggattgata 110 |||||||||||||||||||| Sbjct: 19120123 attttaaaaatggattgata 19120104
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 313 tcctttgcaaactctggaga 332 |||||||||||||||||||| Sbjct: 273938 tcctttgcaaactctggaga 273957
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 tcctttgcaaactctggaga 332 |||||||||||||||||||| Sbjct: 15557027 tcctttgcaaactctggaga 15557008
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 364 ggtgtgtgaaggaggcagtggccg 387 |||| ||||||||||||||||||| Sbjct: 13151054 ggtgggtgaaggaggcagtggccg 13151077
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 377 ggcagtggccgccccctcccctcc 400 |||||||||||| ||||||||||| Sbjct: 16797745 ggcagtggccgcgccctcccctcc 16797768 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 attttaaaaatggattgata 110 |||||||||||||||||||| Sbjct: 2647186 attttaaaaatggattgata 2647205
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 attttaaaaatggattgata 110 |||||||||||||||||||| Sbjct: 30229122 attttaaaaatggattgata 30229103
>dbj|AB231419.1| Uncultured bacterium gene for 16S ribosomal RNA, partial sequence, clone: SBR-Sludge-33 Length = 560 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 424 gggcttgctcttcggtgtcg 443 |||||||||||||||||||| Sbjct: 473 gggcttgctcttcggtgtcg 492
>dbj|AB231392.1| Uncultured bacterium gene for 16S ribosomal RNA, partial sequence, clone: High-Density-68 Length = 536 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 424 gggcttgctcttcggtgtcg 443 |||||||||||||||||||| Sbjct: 449 gggcttgctcttcggtgtcg 468
>dbj|AB231376.1| Uncultured bacterium gene for 16S ribosomal RNA, partial sequence, clone: High-Density-15 Length = 560 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 424 gggcttgctcttcggtgtcg 443 |||||||||||||||||||| Sbjct: 473 gggcttgctcttcggtgtcg 492
>gb|AF090447.2| Zea mays 22 kDa alpha zein gene cluster, complete sequence Length = 346296 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 537 gggtgaggtcacacatgttcatcg 560 ||||||| |||||||||||||||| Sbjct: 46265 gggtgagctcacacatgttcatcg 46288 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 537 gggtgaggtcacacatgttcatcg 560 ||||||| |||||||||||||||| Sbjct: 39444 gggtgagctcacacatgttcatcg 39467
>dbj|AP003343.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0042A10 Length = 146840 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 attttaaaaatggattgata 110 |||||||||||||||||||| Sbjct: 17441 attttaaaaatggattgata 17422
>dbj|AP003229.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0022F10 Length = 150498 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 attttaaaaatggattgata 110 |||||||||||||||||||| Sbjct: 133944 attttaaaaatggattgata 133925
>ref|NM_001005352.1| Sus scrofa cholesterol 7alpha-hydroxylase (CYP7), mRNA Length = 2123 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 aaactctggagaaggcgggc 340 |||||||||||||||||||| Sbjct: 1003 aaactctggagaaggcgggc 1022
>dbj|AP003528.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0633D04 Length = 159636 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 tcctttgcaaactctggaga 332 |||||||||||||||||||| Sbjct: 46360 tcctttgcaaactctggaga 46341
>emb|X03494.1|FSSISG5 Cat c-sis oncogene (platelet-derived growth factor) 5' region Length = 1752 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 382 tggccgccccctcccctccc 401 |||||||||||||||||||| Sbjct: 1405 tggccgccccctcccctccc 1424
>dbj|AP004302.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1122_H01 Length = 103030 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 377 ggcagtggccgccccctcccctcc 400 |||||||||||| ||||||||||| Sbjct: 45987 ggcagtggccgcgccctcccctcc 46010
>dbj|AP005191.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0479D12 Length = 148362 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 attttaaaaatggattgata 110 |||||||||||||||||||| Sbjct: 49408 attttaaaaatggattgata 49427
>gb|AF466646.1| Zea mays putative transposase (Z195D10.1) gene, partial cds; glycyl-tRNA synthetase (Z195D10.2), ornithine carbamoyltransferase (Z195D10.3), putative gag protein (Z195D10.5), putative SET-domain transcriptional regulator (Z195D10.7), putative oxysterol-binding protein (Z195D10.8), putative polyprotein (Z195D10.9), putative oxysterol-binding protein (Z195D10.10), putative gag-pol polyprotein (Z195D10.11), putative phosphatidylinositol-4-phosphate-5-kinase (Z195D10.12), hypothetical protein (Z195D10.15), putative gag-pol polyprotein (Z195D10.16), putative polyprotein (Z195D10.17), putative retrotransposon protein (Z195D10.18), and prpol (Z195D10.19) genes, complete cds; and putative teosinte branched2 (Z195D10.20) gene, partial cds Length = 141939 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 537 gggtgaggtcacacatgttcatcg 560 ||||||| |||||||||||||||| Sbjct: 128403 gggtgagctcacacatgttcatcg 128426 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 537 gggtgaggtcacacatgttcatcg 560 ||||||| |||||||||||||||| Sbjct: 116444 gggtgagctcacacatgttcatcg 116467
>gb|AC006449.19|AC006449 Homo sapiens chromosome 17, clone hCIT.58_E_17, complete sequence Length = 286758 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 364 ggtgtgtgaaggaggcagtg 383 |||||||||||||||||||| Sbjct: 135930 ggtgtgtgaaggaggcagtg 135949
>emb|AL845314.10| Zebrafish DNA sequence from clone CH211-153N11 in linkage group 20, complete sequence Length = 179498 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 aaacaaaacatgtagacata 150 |||||||||||||||||||| Sbjct: 155271 aaacaaaacatgtagacata 155252
>emb|BX000362.6| Zebrafish DNA sequence from clone DKEYP-93D12 in linkage group 20, complete sequence Length = 205186 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 aaacaaaacatgtagacata 150 |||||||||||||||||||| Sbjct: 88115 aaacaaaacatgtagacata 88096
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 313 tcctttgcaaactctggaga 332 |||||||||||||||||||| Sbjct: 273938 tcctttgcaaactctggaga 273957
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 attttaaaaatggattgata 110 |||||||||||||||||||| Sbjct: 19046350 attttaaaaatggattgata 19046331
>emb|BX000501.4|CNS08CDR Oryza sativa chromosome 11, . BAC OSJNBa0032J07 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 160673 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 tcctttgcaaactctggaga 332 |||||||||||||||||||| Sbjct: 31055 tcctttgcaaactctggaga 31036
>emb|AL731752.4|CNS08C81 Oryza sativa chromosome 12, . BAC OJ1536_D01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 127026 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 attttaaaaatggattgata 110 |||||||||||||||||||| Sbjct: 105856 attttaaaaatggattgata 105875
>emb|AL844850.9| Mouse DNA sequence from clone RP23-255B16 on chromosome 2, complete sequence Length = 179361 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 tccattttaaaaatggattg 107 |||||||||||||||||||| Sbjct: 135063 tccattttaaaaatggattg 135044
>gb|AC123806.4| Mus musculus BAC clone RP24-152B7 from 10, complete sequence Length = 160167 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 121 aaatatatagaaacaaaaca 140 |||||||||||||||||||| Sbjct: 61144 aaatatatagaaacaaaaca 61125
>gb|AF020320.1|SSCYPVII4 Sus scrofa cholesterol 7alpha-hydroxylase (cyp7) gene, exon 4 Length = 151 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 aaactctggagaaggcgggc 340 |||||||||||||||||||| Sbjct: 52 aaactctggagaaggcgggc 71
>gb|AC141428.4| Mus musculus BAC clone RP23-127I7 from 10, complete sequence Length = 164381 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 121 aaatatatagaaacaaaaca 140 |||||||||||||||||||| Sbjct: 143787 aaatatatagaaacaaaaca 143768
>emb|AL805951.6| Mouse DNA sequence from clone RP23-326P3 on chromosome 4, complete sequence Length = 197080 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 tagacatatttgtaaaaatt 162 |||||||||||||||||||| Sbjct: 110878 tagacatatttgtaaaaatt 110859
>gb|DQ250537.1| Uncultured bacterium clone TFOc8 16S ribosomal RNA gene, partial sequence Length = 924 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 424 gggcttgctcttcggtgtcg 443 |||||||||||||||||||| Sbjct: 777 gggcttgctcttcggtgtcg 796
>gb|DQ250533.1| Uncultured bacterium clone TFOb23 16S ribosomal RNA gene, partial sequence Length = 906 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 424 gggcttgctcttcggtgtcg 443 |||||||||||||||||||| Sbjct: 759 gggcttgctcttcggtgtcg 778 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,464,260 Number of Sequences: 3902068 Number of extensions: 6464260 Number of successful extensions: 148887 Number of sequences better than 10.0: 140 Number of HSP's better than 10.0 without gapping: 141 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 147957 Number of HSP's gapped (non-prelim): 930 length of query: 628 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 605 effective length of database: 17,143,297,704 effective search space: 10371695110920 effective search space used: 10371695110920 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
