ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags30h06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK103281.1| Oryza sativa (japonica cultivar-group) cDNA clon... 194 2e-46
2dbj|AK068457.1| Oryza sativa (japonica cultivar-group) cDNA clon... 194 2e-46
3dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 131 2e-27
4dbj|AP004008.3| Oryza sativa (japonica cultivar-group) genomic D... 131 2e-27
5dbj|AP003517.3| Oryza sativa (japonica cultivar-group) genomic D... 131 2e-27
6gb|BT017799.1| Zea mays clone EL01N0505G05.c mRNA sequence 123 5e-25
7gb|AY110902.1| Zea mays CL5955_1 mRNA sequence 92 2e-15
8gb|AC136376.3| Mus musculus BAC clone RP23-243M12 from 14, compl... 46 0.092
9gb|AY358024.2| Guanarito virus strain INH-95551 segment L, compl... 44 0.37
10gb|AC063965.8| Homo sapiens chromosome 10 clone RP11-380G5, comp... 44 0.37
11gb|AF067844.1|AF067844 Homo sapiens chromosome 10 clone PTEN, co... 44 0.37
12emb|Z73417.1|HSU131B10 Human DNA sequence from clone LL0XNC01-13... 42 1.4
13emb|AL157971.4|CNS01RGG Human chromosome 14 DNA sequence BAC R-9... 42 1.4
14gb|AC150753.3| Bos taurus BAC CH240-283G19 (Children's Hospital... 40 5.7
15gb|AC148875.2| Pan troglodytes BAC clone CH251-198I11 from Y, co... 40 5.7
16gb|AC148937.2| Pan troglodytes BAC clone CH251-485I7 from Y, com... 40 5.7
17gb|AC147687.2| Pan troglodytes BAC clone CH251-95K2 from Y, comp... 40 5.7
18gb|AC147127.2| Pan troglodytes BAC clone CH251-410H20 from Y, co... 40 5.7
19gb|AC148941.3| Pan troglodytes BAC clone CH251-41G22 from chromo... 40 5.7
20gb|AC136965.2| Canis familiaris clone RP81-213K20, complete sequ... 40 5.7
21gb|AC147338.2| Pan troglodytes BAC clone CH251-61P8 from Y, comp... 40 5.7
22gb|AC113304.15| Mus musculus chromosome 9, clone RP23-431B6, com... 40 5.7
23gb|AC126011.9| Medicago truncatula clone mth2-24f16, complete se... 40 5.7
24gb|AC154826.2| Mus musculus BAC clone RP23-72D18 from chromosome... 40 5.7
25gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence 40 5.7
26emb|BX511144.13| Zebrafish DNA sequence from clone CH211-39L20 i... 40 5.7
27gb|AC092318.2| Homo sapiens chromosome 5 clone RPCI-1_86A12, com... 40 5.7
28dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 40 5.7
29gb|AC106791.4| Homo sapiens chromosome 5 clone RP11-381K20, comp... 40 5.7
30gb|AC093656.4| Homo sapiens BAC clone RP11-440N4 from 4, complet... 40 5.7
31gb|AC097519.2| Homo sapiens BAC clone RP11-549K7 from 4, complet... 40 5.7
32gb|AC145790.2| Xenopus tropicalis clone CH216-12L5, complete seq... 40 5.7
33gb|AC147334.4| Pan troglodytes BAC clone CH251-372D20 from chrom... 40 5.7
34gb|AC155319.2| Pan troglodytes BAC clone CH251-770A15 from chrom... 40 5.7
35emb|AL591374.5| Zebrafish DNA sequence from clone BUSM1-204B6 in... 40 5.7
36gb|AC125061.3| Mus musculus BAC clone RP23-418E13 from 5, comple... 40 5.7
37emb|AL136297.3|CNS01DW1 Human chromosome 14 DNA sequence BAC R-6... 40 5.7
38emb|AL356802.5|CNS05TDK Human chromosome 14 DNA sequence BAC C-2... 40 5.7
39emb|AL683854.20| Mouse DNA sequence from clone RP23-237K13 on ch... 40 5.7
40emb|AL671911.12| Mouse DNA sequence from clone RP23-250F8 on chr... 40 5.7
41emb|BX294368.7| Zebrafish DNA sequence from clone CH211-244N12 i... 40 5.7 
>dbj|AK103281.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033124L23, full
            insert sequence
          Length = 1803

 Score =  194 bits (98), Expect = 2e-46
 Identities = 161/182 (88%)
 Strand = Plus / Minus

                                                                        
Query: 244  atctgtgcaatgtccttgttatactgatctatccatccatgtatgatctcaacttcctgt 303
            |||||||||| ||||| ||| ||||||||||||||||| |||||||||| |||||| |||
Sbjct: 1624 atctgtgcaaggtcctcgttgtactgatctatccatccctgtatgatcttaacttcttgt 1565

                                                                        
Query: 304  ctcctttgttcaacaacccagtctggatcatccttggtttcagatctgaagtccaaatga 363
            || | |||||| |||||||| ||||||||||| || ||| | ||||||||||||||||||
Sbjct: 1564 cttcgttgttctacaacccaatctggatcatctttagttgctgatctgaagtccaaatga 1505

                                                                        
Query: 364  tgggcccctttctctgtgactagagcaatgatgctggatgatatgttcttgagcaccccg 423
            || || |||||||| ||||| || |||||||| || ||||||||||||||||||||||||
Sbjct: 1504 tgagctcctttctccgtgacaagggcaatgatactagatgatatgttcttgagcaccccg 1445

              
Query: 424  cc 425
            ||
Sbjct: 1444 cc 1443
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>dbj|AK068457.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151A14, full
            insert sequence
          Length = 2060

 Score =  194 bits (98), Expect = 2e-46
 Identities = 161/182 (88%)
 Strand = Plus / Minus

                                                                        
Query: 244  atctgtgcaatgtccttgttatactgatctatccatccatgtatgatctcaacttcctgt 303
            |||||||||| ||||| ||| ||||||||||||||||| |||||||||| |||||| |||
Sbjct: 1626 atctgtgcaaggtcctcgttgtactgatctatccatccctgtatgatcttaacttcttgt 1567

                                                                        
Query: 304  ctcctttgttcaacaacccagtctggatcatccttggtttcagatctgaagtccaaatga 363
            || | |||||| |||||||| ||||||||||| || ||| | ||||||||||||||||||
Sbjct: 1566 cttcgttgttctacaacccaatctggatcatctttagttgctgatctgaagtccaaatga 1507

                                                                        
Query: 364  tgggcccctttctctgtgactagagcaatgatgctggatgatatgttcttgagcaccccg 423
            || || |||||||| ||||| || |||||||| || ||||||||||||||||||||||||
Sbjct: 1506 tgagctcctttctccgtgacaagggcaatgatactagatgatatgttcttgagcaccccg 1447

              
Query: 424  cc 425
            ||
Sbjct: 1446 cc 1445
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  131 bits (66), Expect = 2e-27
 Identities = 108/122 (88%)
 Strand = Plus / Plus

                                                                            
Query: 244      atctgtgcaatgtccttgttatactgatctatccatccatgtatgatctcaacttcctgt 303
                |||||||||| ||||| ||| ||||||||||||||||| |||||||||| |||||| |||
Sbjct: 26073094 atctgtgcaaggtcctcgttgtactgatctatccatccctgtatgatcttaacttcttgt 26073153

                                                                            
Query: 304      ctcctttgttcaacaacccagtctggatcatccttggtttcagatctgaagtccaaatga 363
                || | |||||| |||||||| ||||||||||| || ||| | ||||||||||||||||||
Sbjct: 26073154 cttcgttgttctacaacccaatctggatcatctttagttgctgatctgaagtccaaatga 26073213

                  
Query: 364      tg 365
                ||
Sbjct: 26073214 tg 26073215



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                                    
Query: 370      cctttctctgtgactagagcaatgatgctggatgatatgttcttgagcaccc 421
                |||||||| ||||| || |||||||| || ||||||||||||||||||||||
Sbjct: 26073295 cctttctccgtgacaagggcaatgatactagatgatatgttcttgagcaccc 26073346
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>dbj|AP004008.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OJ1226_A12
          Length = 113025

 Score =  131 bits (66), Expect = 2e-27
 Identities = 108/122 (88%)
 Strand = Plus / Plus

                                                                          
Query: 244    atctgtgcaatgtccttgttatactgatctatccatccatgtatgatctcaacttcctgt 303
              |||||||||| ||||| ||| ||||||||||||||||| |||||||||| |||||| |||
Sbjct: 110952 atctgtgcaaggtcctcgttgtactgatctatccatccctgtatgatcttaacttcttgt 111011

                                                                          
Query: 304    ctcctttgttcaacaacccagtctggatcatccttggtttcagatctgaagtccaaatga 363
              || | |||||| |||||||| ||||||||||| || ||| | ||||||||||||||||||
Sbjct: 111012 cttcgttgttctacaacccaatctggatcatctttagttgctgatctgaagtccaaatga 111071

                
Query: 364    tg 365
              ||
Sbjct: 111072 tg 111073



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                                  
Query: 370    cctttctctgtgactagagcaatgatgctggatgatatgttcttgagcaccc 421
              |||||||| ||||| || |||||||| || ||||||||||||||||||||||
Sbjct: 111153 cctttctccgtgacaagggcaatgatactagatgatatgttcttgagcaccc 111204
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>dbj|AP003517.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0062J02
          Length = 151636

 Score =  131 bits (66), Expect = 2e-27
 Identities = 108/122 (88%)
 Strand = Plus / Plus

                                                                         
Query: 244   atctgtgcaatgtccttgttatactgatctatccatccatgtatgatctcaacttcctgt 303
             |||||||||| ||||| ||| ||||||||||||||||| |||||||||| |||||| |||
Sbjct: 52339 atctgtgcaaggtcctcgttgtactgatctatccatccctgtatgatcttaacttcttgt 52398

                                                                         
Query: 304   ctcctttgttcaacaacccagtctggatcatccttggtttcagatctgaagtccaaatga 363
             || | |||||| |||||||| ||||||||||| || ||| | ||||||||||||||||||
Sbjct: 52399 cttcgttgttctacaacccaatctggatcatctttagttgctgatctgaagtccaaatga 52458

               
Query: 364   tg 365
             ||
Sbjct: 52459 tg 52460



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                                 
Query: 370   cctttctctgtgactagagcaatgatgctggatgatatgttcttgagcaccc 421
             |||||||| ||||| || |||||||| || ||||||||||||||||||||||
Sbjct: 52540 cctttctccgtgacaagggcaatgatactagatgatatgttcttgagcaccc 52591
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>gb|BT017799.1| Zea mays clone EL01N0505G05.c mRNA sequence
          Length = 1313

 Score =  123 bits (62), Expect = 5e-25
 Identities = 137/162 (84%)
 Strand = Plus / Minus

                                                                       
Query: 264 atactgatctatccatccatgtatgatctcaacttcctgtctcctttgttcaacaaccca 323
           ||||||||| |||||||| || ||||||||||| || || ||||| ||||| |  | |||
Sbjct: 871 atactgatcaatccatccctgaatgatctcaacctcttgcctcctctgttctatgagcca 812

                                                                       
Query: 324 gtctggatcatccttggtttcagatctgaagtccaaatgatgggcccctttctctgtgac 383
           |||||||||| |||| |||  ||| || ||||| ||||||||||| ||||||||||| ||
Sbjct: 811 gtctggatcacccttcgttgaagacctcaagtctaaatgatgggcacctttctctgtaac 752

                                                     
Query: 384 tagagcaatgatgctggatgatatgttcttgagcaccccgcc 425
            || || ||||||||||| || ||||||||||||||||||||
Sbjct: 751 aagggcgatgatgctggacgagatgttcttgagcaccccgcc 710
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>gb|AY110902.1| Zea mays CL5955_1 mRNA sequence
          Length = 1002

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 133/162 (82%)
 Strand = Plus / Minus

                                                                       
Query: 264 atactgatctatccatccatgtatgatctcaacttcctgtctcctttgttcaacaaccca 323
           |||||| ||||||||||| | ||||||||| ||||| || ||||| |||||   ||||||
Sbjct: 749 atactggtctatccatccctctatgatctcgacttcttgcctcctctgttctgtaaccca 690

                                                                       
Query: 324 gtctggatcatccttggtttcagatctgaagtccaaatgatgggcccctttctctgtgac 383
           ||| ||||| || | |||  |  |||||| ||||| |||||| ||||||||||| |||||
Sbjct: 689 gtccggatcctcatcggtcgcgaatctgaggtccagatgatgcgcccctttctccgtgac 630

                                                     
Query: 384 tagagcaatgatgctggatgatatgttcttgagcaccccgcc 425
            || || | ||||||||| || ||||||||||| ||||||||
Sbjct: 629 aagggcgacgatgctggacgagatgttcttgaggaccccgcc 588
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>gb|AC136376.3| Mus musculus BAC clone RP23-243M12 from 14, complete sequence
          Length = 197646

 Score = 46.1 bits (23), Expect = 0.092
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 160    aacaaaggaaaatccttatattt 182
              |||||||||||||||||||||||
Sbjct: 141332 aacaaaggaaaatccttatattt 141310
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>gb|AY358024.2| Guanarito virus strain INH-95551 segment L, complete sequence
          Length = 7081

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 384  tagagcaatgatgctggatgat 405
            ||||||||||||||||||||||
Sbjct: 1412 tagagcaatgatgctggatgat 1391
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>gb|AC063965.8| Homo sapiens chromosome 10 clone RP11-380G5, complete sequence
          Length = 201536

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 283   tgtatgatctcaacttcctgtctcctttgt 312
             ||||||||||| ||||||| ||||||||||
Sbjct: 20447 tgtatgatctccacttcctctctcctttgt 20476
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>gb|AF067844.1|AF067844 Homo sapiens chromosome 10 clone PTEN, complete sequence
          Length = 218336

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 283    tgtatgatctcaacttcctgtctcctttgt 312
              ||||||||||| ||||||| ||||||||||
Sbjct: 186264 tgtatgatctccacttcctctctcctttgt 186235
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>emb|Z73417.1|HSU131B10 Human DNA sequence from clone LL0XNC01-131B10 on chromosome X Contains
             a novel gene similar to McLeod syndrome-associated, Kell
             blood group protein; membrane transport protein
             (LOC347425), a TGF beta-inducible nuclear protein 1
             (TINP1) pseudogene and one CpG island, complete sequence
          Length = 37650

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 139   ttggtgcttattgccctgtagaaca 163
             ||||| |||||||||||||||||||
Sbjct: 34733 ttggttcttattgccctgtagaaca 34757
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>emb|AL157971.4|CNS01RGG Human chromosome 14 DNA sequence BAC R-933I1 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 176368

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 163    aaaggaaaatccttatatttc 183
              |||||||||||||||||||||
Sbjct: 102805 aaaggaaaatccttatatttc 102785
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>gb|AC150753.3| Bos taurus  BAC CH240-283G19 (Children's Hospital Oakland Research
             Institute Bovine BAC Library (male)) complete sequence
          Length = 181464

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 357   caaatgatgggcccctttct 376
             ||||||||||||||||||||
Sbjct: 14520 caaatgatgggcccctttct 14501
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>gb|AC148875.2| Pan troglodytes BAC clone CH251-198I11 from Y, complete sequence
          Length = 182437

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 51    aagagaaggaagatatctaatctc 74
             ||||||||||| ||||||||||||
Sbjct: 75530 aagagaaggaaaatatctaatctc 75507



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 51    aagagaaggaagatatctaatctc 74
             ||||||||||| ||||||||||||
Sbjct: 22229 aagagaaggaaaatatctaatctc 22252
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>gb|AC148937.2| Pan troglodytes BAC clone CH251-485I7 from Y, complete sequence
          Length = 184818

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 51     aagagaaggaagatatctaatctc 74
              ||||||||||| ||||||||||||
Sbjct: 115606 aagagaaggaaaatatctaatctc 115583



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 51    aagagaaggaagatatctaatctc 74
             ||||||||||| ||||||||||||
Sbjct: 62284 aagagaaggaaaatatctaatctc 62307
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>gb|AC147687.2| Pan troglodytes BAC clone CH251-95K2 from Y, complete sequence
          Length = 212365

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 51   aagagaaggaagatatctaatctc 74
            ||||||||||| ||||||||||||
Sbjct: 7992 aagagaaggaaaatatctaatctc 7969
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>gb|AC147127.2| Pan troglodytes BAC clone CH251-410H20 from Y, complete sequence
          Length = 169143

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 51    aagagaaggaagatatctaatctc 74
             ||||||||||| ||||||||||||
Sbjct: 47978 aagagaaggaaaatatctaatctc 47955
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>gb|AC148941.3| Pan troglodytes BAC clone CH251-41G22 from chromosome y, complete
              sequence
          Length = 243842

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 51     aagagaaggaagatatctaatctc 74
              ||||||||||| ||||||||||||
Sbjct: 212605 aagagaaggaaaatatctaatctc 212582



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 51     aagagaaggaagatatctaatctc 74
              ||||||||||| ||||||||||||
Sbjct: 159304 aagagaaggaaaatatctaatctc 159327
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>gb|AC136965.2| Canis familiaris clone RP81-213K20, complete sequence
          Length = 157884

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 361    tgatgggcccctttctctgt 380
              ||||||||||||||||||||
Sbjct: 129495 tgatgggcccctttctctgt 129514
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>gb|AC147338.2| Pan troglodytes BAC clone CH251-61P8 from Y, complete sequence
          Length = 173967

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 51     aagagaaggaagatatctaatctc 74
              ||||||||||| ||||||||||||
Sbjct: 167131 aagagaaggaaaatatctaatctc 167154
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>gb|AC113304.15| Mus musculus chromosome 9, clone RP23-431B6, complete sequence
          Length = 202182

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 189  cagccacattaatcttccttgact 212
            |||||||| |||||||||||||||
Sbjct: 3575 cagccacagtaatcttccttgact 3552
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>gb|AC126011.9| Medicago truncatula clone mth2-24f16, complete sequence
          Length = 92933

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 27    ataacaaataatataagttt 46
             ||||||||||||||||||||
Sbjct: 80504 ataacaaataatataagttt 80485
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>gb|AC154826.2| Mus musculus BAC clone RP23-72D18 from chromosome 9, complete sequence
          Length = 150028

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 189   cagccacattaatcttccttgact 212
             |||||||| |||||||||||||||
Sbjct: 18741 cagccacagtaatcttccttgact 18764
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>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 51      aagagaaggaagatatctaatctc 74
               ||||||||||| ||||||||||||
Sbjct: 9424549 aagagaaggaaaatatctaatctc 9424526



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 51      aagagaaggaagatatctaatctc 74
               ||||||||||| ||||||||||||
Sbjct: 9371248 aagagaaggaaaatatctaatctc 9371271



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 51      aagagaaggaagatatctaatctc 74
               ||||||||||| ||||||||||||
Sbjct: 8691950 aagagaaggaaaatatctaatctc 8691927



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 51      aagagaaggaagatatctaatctc 74
               ||||||||||| ||||||||||||
Sbjct: 8638640 aagagaaggaaaatatctaatctc 8638663



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 51      aagagaaggaagatatctaatctc 74
               ||||||||||| ||||||||||||
Sbjct: 7956044 aagagaaggaaaatatctaatctc 7956021



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 51      aagagaaggaagatatctaatctc 74
               ||||||||||| ||||||||||||
Sbjct: 7902726 aagagaaggaaaatatctaatctc 7902749
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>emb|BX511144.13| Zebrafish DNA sequence from clone CH211-39L20 in linkage group 12,
              complete sequence
          Length = 185993

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 29     aacaaataatataagttttacaaa 52
              |||||||||||||||| |||||||
Sbjct: 179552 aacaaataatataagtattacaaa 179575
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>gb|AC092318.2| Homo sapiens chromosome 5 clone RPCI-1_86A12, complete sequence
          Length = 91803

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 158   agaacaaaggaaaatcctta 177
             ||||||||||||||||||||
Sbjct: 57880 agaacaaaggaaaatcctta 57899
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>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003
          Length = 4170692

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 185     cattcagccacattaatctt 204
               ||||||||||||||||||||
Sbjct: 3934895 cattcagccacattaatctt 3934914
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>gb|AC106791.4| Homo sapiens chromosome 5 clone RP11-381K20, complete sequence
          Length = 216877

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 158    agaacaaaggaaaatcctta 177
              ||||||||||||||||||||
Sbjct: 213431 agaacaaaggaaaatcctta 213412
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>gb|AC093656.4| Homo sapiens BAC clone RP11-440N4 from 4, complete sequence
          Length = 152326

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 26    tataacaaataatataagttttac 49
             |||||||||||| |||||||||||
Sbjct: 17051 tataacaaataaaataagttttac 17028
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>gb|AC097519.2| Homo sapiens BAC clone RP11-549K7 from 4, complete sequence
          Length = 185556

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 26    tataacaaataatataagttttac 49
             |||||||||||| |||||||||||
Sbjct: 83411 tataacaaataaaataagttttac 83388
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>gb|AC145790.2| Xenopus tropicalis clone CH216-12L5, complete sequence
          Length = 192318

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 115   cctttagtaaattcaccact 134
             ||||||||||||||||||||
Sbjct: 65965 cctttagtaaattcaccact 65984
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>gb|AC147334.4| Pan troglodytes BAC clone CH251-372D20 from chromosome y, complete
              sequence
          Length = 211310

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 51     aagagaaggaagatatctaatctc 74
              ||||||||||| ||||||||||||
Sbjct: 158264 aagagaaggaaaatatctaatctc 158287
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>gb|AC155319.2| Pan troglodytes BAC clone CH251-770A15 from chromosome y, complete
             sequence
          Length = 185385

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 51    aagagaaggaagatatctaatctc 74
             ||||||||||| ||||||||||||
Sbjct: 13757 aagagaaggaaaatatctaatctc 13734
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>emb|AL591374.5| Zebrafish DNA sequence from clone BUSM1-204B6 in linkage group 6,
             complete sequence
          Length = 102137

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 29    aacaaataatataagttttacaaa 52
             |||||||||||||||| |||||||
Sbjct: 97456 aacaaataatataagtattacaaa 97479
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>gb|AC125061.3| Mus musculus BAC clone RP23-418E13 from 5, complete sequence
          Length = 210342

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 268    tgatctatccatccatgtatgatc 291
              |||||||||||||||| |||||||
Sbjct: 150494 tgatctatccatccatctatgatc 150471
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>emb|AL136297.3|CNS01DW1 Human chromosome 14 DNA sequence BAC R-60K23 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 163918

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 28    taacaaataatataagtttt 47
             ||||||||||||||||||||
Sbjct: 19984 taacaaataatataagtttt 20003
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>emb|AL356802.5|CNS05TDK Human chromosome 14 DNA sequence BAC C-2137E9 of library CalTech-D from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 137883

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 28    taacaaataatataagtttt 47
             ||||||||||||||||||||
Sbjct: 62411 taacaaataatataagtttt 62392
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>emb|AL683854.20| Mouse DNA sequence from clone RP23-237K13 on chromosome 4, complete
              sequence
          Length = 234724

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 289    atctcaacttcctgtctcct 308
              ||||||||||||||||||||
Sbjct: 105475 atctcaacttcctgtctcct 105456
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>emb|AL671911.12| Mouse DNA sequence from clone RP23-250F8 on chromosome X, complete
              sequence
          Length = 213401

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 368    cccctttctctgtgactaga 387
              ||||||||||||||||||||
Sbjct: 118922 cccctttctctgtgactaga 118941



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 368   cccctttctctgtgactaga 387
             ||||||||||||||||||||
Sbjct: 75099 cccctttctctgtgactaga 75080
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>emb|BX294368.7| Zebrafish DNA sequence from clone CH211-244N12 in linkage group 6,
             complete sequence
          Length = 147484

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 29    aacaaataatataagttttacaaa 52
             |||||||||||||||| |||||||
Sbjct: 81672 aacaaataatataagtattacaaa 81649


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,836,059
Number of Sequences: 3902068
Number of extensions: 4836059
Number of successful extensions: 121843
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 121660
Number of HSP's gapped (non-prelim): 182
length of query: 425
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 403
effective length of database: 17,147,199,772
effective search space: 6910321508116
effective search space used: 6910321508116
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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