ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags30h04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK069115.1| Oryza sativa (japonica cultivar-group) cDNA clon... 178 2e-41
2dbj|AK111684.1| Oryza sativa (japonica cultivar-group) cDNA clon... 101 3e-18
3dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 80 1e-11
4dbj|AP005181.4| Oryza sativa (japonica cultivar-group) genomic D... 80 1e-11
5dbj|AP004315.3| Oryza sativa (japonica cultivar-group) genomic D... 80 1e-11
6dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 72 3e-09
7gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 72 3e-09
8emb|AL713951.4|CNS07YPU Oryza sativa chromosome 12, . BAC OJ1111... 72 3e-09
9ref|XM_478073.1| Oryza sativa (japonica cultivar-group), mRNA 64 7e-07
10ref|NM_113250.2| Arabidopsis thaliana S-adenosylmethionine-depen... 56 2e-04
11ref|NM_113256.3| Arabidopsis thaliana cyclopropane-fatty-acyl-ph... 56 2e-04
12ref|NM_113251.3| Arabidopsis thaliana S-adenosylmethionine-depen... 56 2e-04
13gb|BT000811.1| Arabidopsis thaliana At3g23520 mRNA sequence 56 2e-04
14gb|AY072507.1| Arabidopsis thaliana cyclopocyclopropane fatty ac... 56 2e-04
15gb|AY065013.1| Arabidopsis thaliana AT3g23510/MEE5_5 mRNA, compl... 56 2e-04
16gb|AY064962.1| Arabidopsis thaliana AT3g23510/MEE5_5 mRNA, compl... 56 2e-04
17gb|AY054671.1| Arabidopsis thaliana cyclopocyclopropane fatty ac... 56 2e-04
18gb|BT006344.1| Arabidopsis thaliana At3g23510/MEE5_5 gene, compl... 56 2e-04
19emb|BX824497.1|CNS0A7DL Arabidopsis thaliana Full-length cDNA Co... 56 2e-04
20dbj|AK176391.1| Arabidopsis thaliana mRNA, complete cds, clone: ... 56 2e-04
21dbj|AP000374.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 56 2e-04
22dbj|AB023036.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 56 2e-04
23gb|BT001134.1| Arabidopsis thaliana At3g23510/MEE5_5 mRNA, compl... 56 2e-04
24gb|BT020452.1| Arabidopsis thaliana At3g23470 mRNA, complete cds 48 0.040
25gb|BT020267.1| Arabidopsis thaliana At3g23470 mRNA, complete cds 48 0.040
26gb|AC168277.2| Mus musculus BAC RP24-186L17 (Roswell Park Cance... 44 0.63
27gb|AY574038.1| Gossypium hirsutum cyclopropane fatty acid syntha... 44 0.63
28emb|AL359074.12| Human DNA sequence from clone RP11-137L10 on ch... 44 0.63
29emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome 44 0.63
30gb|AC073389.10| Homo sapiens chromosome 10 clone RP11-464F9, com... 44 0.63
31gb|AC153601.6| Mus musculus 6 BAC RP23-405O6 (Roswell Park Cance... 44 0.63
32emb|AL929447.7| Mouse DNA sequence from clone RP23-360O17 on chr... 44 0.63
33emb|AL121718.8|HSJ390M24 Human DNA sequence from clone RP3-390M2... 42 2.5
34emb|BX825815.1|CNS0A7J8 Arabidopsis thaliana Full-length cDNA Co... 42 2.5
35emb|BX822760.1|CNS0A5XU Arabidopsis thaliana Full-length cDNA Co... 42 2.5
36dbj|AB015474.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 42 2.5
37gb|AE014299.1| Shewanella oneidensis MR-1, complete genome 42 2.5
38ref|NM_113254.2| Arabidopsis thaliana cyclopropane-fatty-acyl-ph... 40 9.8
39gb|AC116697.7| Mus musculus chromosome 3, clone RP24-444C12, com... 40 9.8
40gb|AC122541.3| Mus musculus BAC clone RP24-567D4 from chromosome... 40 9.8
41gb|AC138679.10| Mus musculus chromosome 5, clone RP23-177I4, com... 40 9.8
42gb|AC126544.5| Homo sapiens chromosome 17, clone RP11-707O23, co... 40 9.8
43gb|AC098717.3| Mus musculus BAC clone RP23-2G2 from 12, complete... 40 9.8
44gb|AC146076.2| Pan troglodytes BAC clone RP43-15J5 from 7, compl... 40 9.8
45gb|AC095044.3| Homo sapiens BAC clone RP11-132B16 from 7, comple... 40 9.8
46emb|AL512452.7| Human DNA sequence from clone RP11-520F22 on chr... 40 9.8
47emb|AL365199.11| Human DNA sequence from clone RP11-124O11 on ch... 40 9.8
48emb|AL117337.26|HSA393J16 Human DNA sequence from clone RP11-393... 40 9.8
49emb|X15311.1|RESSAVPO Woolly monkey sarcoma virus SSAV provirus ... 40 9.8
50gb|AC106030.5| Homo sapiens chromosome 17, clone CTD-3070M1, com... 40 9.8
51gb|AF321984.1|AF321984 Lycopersicon esculentum lethal leaf spot ... 40 9.8
52gb|AC092364.3| Homo sapiens chromosome 19 clone RP11-420K14, com... 40 9.8
53gb|AC008270.3| Homo sapiens BAC clone RP11-111G16 from 2, comple... 40 9.8
54gb|AC009533.10| Homo sapiens 12 BAC RP11-22B23 (Roswell Park Can... 40 9.8
55dbj|AK117243.1| Arabidopsis thaliana At3g23510 mRNA for putative... 40 9.8
56gb|AF205588.1|AF205588 Homo sapiens ZNF01 and HUMORFKG1B genes, ... 40 9.8
57emb|CT010460.16| Mouse DNA sequence from clone RP23-311G21 on ch... 40 9.8
58dbj|AP005364.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 9.8
59gb|AC131803.3| Mus musculus BAC clone RP24-549I15 from chromosom... 40 9.8
60gb|AC004703.1|AC004703 Homo sapiens chromosome 17, clone hRPC.11... 40 9.8
61emb|BX005021.4| Zebrafish DNA sequence from clone DKEY-69D12, co... 40 9.8
62emb|BX005168.10| Mouse DNA sequence from clone RP23-204O8 on chr... 40 9.8
63emb|Z70664.1|HERVHC2 Human endogenous retroviral element HC2 40 9.8
64gb|M26927.1|PCGGPE Gibbon ape leukemia virus gag, pol, and env g... 40 9.8
65dbj|AP005229.2| Homo sapiens genomic DNA, chromosome 18, clone:R... 40 9.8 
>dbj|AK069115.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023008H02, full
            insert sequence
          Length = 2846

 Score =  178 bits (90), Expect = 2e-41
 Identities = 285/350 (81%)
 Strand = Plus / Minus

                                                                        
Query: 301  tagtactcccagatacgcatgaacttatcatcaaagcccagggccaaaatttcatctttg 360
            |||||||||||  |||| |||||||| ||||||||||||||||||||||||| |||||| 
Sbjct: 2569 tagtactcccatgtacgaatgaacttctcatcaaagcccagggccaaaattttatcttta 2510

                                                                        
Query: 361  ttgatcatgaagttgtccctccagcgcatcagagtcgtgtagtaatgtggcccaatattc 420
            |||  ||||||||||||||||||||| |||||||| || || |||||   ||||||||||
Sbjct: 2509 ttggccatgaagttgtccctccagcgtatcagagttgtataataatggtacccaatattc 2450

                                                                        
Query: 421  tccacatgctctatgctgaaccttgatgacgtggtcatggcagacattacacgggccaaa 480
            || || ||||| |||| || ||||||||  |  | |||||||||  |||  || | || |
Sbjct: 2449 tcaacgtgctcaatgcagagccttgatgcagcagacatggcagatgttatccgagtcaga 2390

                                                                        
Query: 481  gaaggaaggcagccaccaggaaatatgtattcctttatgaagtccgtcctccttctgtat 540
            ||||||||||| |||||||| ||||||||||| || || ||||| |  || || | ||| 
Sbjct: 2389 gaaggaaggcatccaccagggaatatgtattctttaataaagtctgagcttctccggtac 2330

                                                                        
Query: 541  tgctcgtaccgttcctctggagctgagatgaactggaggaccaatatgccatcttcagcc 600
            |  || ||||||||||| |||  |||||| ||||||  ||| |||||||||| |||||||
Sbjct: 2329 tcatcataccgttcctccggaattgagataaactgggtgacaaatatgccattttcagcc 2270

                                                              
Query: 601  aagtaagactcacaacaggcaaaaaattcgtccatatattcatggccaac 650
            ||    |||||||| ||| |||| ||||| ||||| |||||||| |||||
Sbjct: 2269 aaaagggactcacagcagccaaagaattcatccatgtattcatgaccaac 2220



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 232  ggacgagagaaaacaacctggtaatctccaagtgt 266
            ||||||||||| |||| |||||| |||||||||||
Sbjct: 2638 ggacgagagaatacaatctggtagtctccaagtgt 2604
to top
>dbj|AK111684.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013169K10, full
            insert sequence
          Length = 1367

 Score =  101 bits (51), Expect = 3e-18
 Identities = 330/423 (78%)
 Strand = Plus / Minus

                                                                        
Query: 225  gttgcctggacgagagaaaacaacctggtaatctccaagtgttcgtgacttgaagcaaga 284
            |||||| || ||||| || |||| |||||| | ||||||||| ||||||||||| | || 
Sbjct: 1120 gttgccaggccgagacaacacaatctggtagtttccaagtgtacgtgacttgaacccagc 1061

                                                                        
Query: 285  cgcagagaatatgaggtagtactcccagatacgcatgaacttatcatcaaagcccagggc 344
             ||  || ||||||  ||||||||||| || || |||||||| ||||| || ||||||| 
Sbjct: 1060 tgcgcagtatatgaaatagtactcccatatgcggatgaacttgtcatcgaatcccaggga 1001

                                                                        
Query: 345  caaaatttcatctttgttgatcatgaagttgtccctccagcgcatcagagtcgtgtagta 404
            |   || || ||| ||||   |||||||||||||| |||||| ||||| || | ||||||
Sbjct: 1000 ctttatctcttctctgttagccatgaagttgtcccgccagcgtatcagcgtggggtagta 941

                                                                        
Query: 405  atgtggcccaatattctccacatgctctatgctgaaccttgatgacgtggtcatggcaga 464
             ||   ||||||||||||||  ||||| ||||  | ||| || || |||| |||||| ||
Sbjct: 940  gtggtacccaatattctccaagtgctcgatgcatagcctcgacgaggtggacatggcgga 881

                                                                        
Query: 465  cattacacgggccaaagaaggaaggcagccaccaggaaatatgtattcctttatgaagtc 524
              |||  || | ||| || |||||||| || |||||||||||||||||||| ||||||||
Sbjct: 880  tgttatccgagacaaggatggaaggcaacccccaggaaatatgtattccttgatgaagtc 821

                                                                        
Query: 525  cgtcctccttctgtattgctcgtaccgttcctctggagctgagatgaactggaggaccaa 584
             |  ||||  |||||||  ||||||||||| || ||    ||||||||||||||||| ||
Sbjct: 820  tgaactccccctgtattcttcgtaccgttcttcagggatggagatgaactggaggacgaa 761

                                                                        
Query: 585  tatgccatcttcagccaagtaagactcacaacaggcaaaaaattcgtccatatattcatg 644
             | |||||| |  |||| |  |||||| || ||| | || || |||||||| ||||||||
Sbjct: 760  caggccatcctgtgccaggagagactcgcagcagccgaagaaatcgtccatgtattcatg 701

               
Query: 645  gcc 647
            |||
Sbjct: 700  gcc 698



 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 696 tggtatttgacggtagtcgc 715
           ||||||||||||||||||||
Sbjct: 646 tggtatttgacggtagtcgc 627
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 133/164 (81%)
 Strand = Plus / Minus

                                                                            
Query: 484      ggaaggcagccaccaggaaatatgtattcctttatgaagtccgtcctccttctgtattgc 543
                |||||||| || |||||||||||||||||||| |||||||| |  ||||| |||||||  
Sbjct: 17064930 ggaaggcaacccccaggaaatatgtattccttgatgaagtctgaactcctcctgtattct 17064871

                                                                            
Query: 544      tcgtaccgttcctctggagctgagatgaactggaggaccaatatgccatcttcagccaag 603
                ||||||||||| || ||    ||||||||||||||||| || | |||||| |  |||| |
Sbjct: 17064870 tcgtaccgttcttcagggatggagatgaactggaggacgaacaggccatcctgtgccagg 17064811

                                                            
Query: 604      taagactcacaacaggcaaaaaattcgtccatatattcatggcc 647
                  |||||| || ||| | || || |||||||| |||||||||||
Sbjct: 17064810 agagactcgcagcagccgaagaaatcgtccatgtattcatggcc 17064767



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 96/119 (80%)
 Strand = Plus / Minus

                                                                            
Query: 225      gttgcctggacgagagaaaacaacctggtaatctccaagtgttcgtgacttgaagcaaga 284
                |||||| || ||||| || |||| |||||| | ||||||||| ||||||||||| | || 
Sbjct: 17066588 gttgccaggccgagacaacacaatctggtagtttccaagtgtacgtgacttgaacccagc 17066529

                                                                           
Query: 285      cgcagagaatatgaggtagtactcccagatacgcatgaacttatcatcaaagcccaggg 343
                 ||  || ||||||  ||||||||||| || || |||||||| ||||| || |||||||
Sbjct: 17066528 tgcgcagtatatgaaatagtactcccatatgcggatgaacttgtcatcgaatcccaggg 17066470



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 61/73 (83%)
 Strand = Plus / Minus

                                                                            
Query: 366      catgaagttgtccctccagcgcatcagagtcgtgtagtaatgtggcccaatattctccac 425
                |||||||||||||| |||||| ||||| || | |||||| ||   |||||||||||||| 
Sbjct: 17066269 catgaagttgtcccgccagcgtatcagcgtggggtagtagtggtacccaatattctccaa 17066210

                             
Query: 426      atgctctatgctg 438
                 ||||| ||||||
Sbjct: 17066209 gtgctcgatgctg 17066197



 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 696      tggtatttgacggtagtcgc 715
                ||||||||||||||||||||
Sbjct: 17064625 tggtatttgacggtagtcgc 17064606
to top
>dbj|AP005181.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0016H06
          Length = 148158

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 133/164 (81%)
 Strand = Plus / Minus

                                                                          
Query: 484    ggaaggcagccaccaggaaatatgtattcctttatgaagtccgtcctccttctgtattgc 543
              |||||||| || |||||||||||||||||||| |||||||| |  ||||| |||||||  
Sbjct: 144341 ggaaggcaacccccaggaaatatgtattccttgatgaagtctgaactcctcctgtattct 144282

                                                                          
Query: 544    tcgtaccgttcctctggagctgagatgaactggaggaccaatatgccatcttcagccaag 603
              ||||||||||| || ||    ||||||||||||||||| || | |||||| |  |||| |
Sbjct: 144281 tcgtaccgttcttcagggatggagatgaactggaggacgaacaggccatcctgtgccagg 144222

                                                          
Query: 604    taagactcacaacaggcaaaaaattcgtccatatattcatggcc 647
                |||||| || ||| | || || |||||||| |||||||||||
Sbjct: 144221 agagactcgcagcagccgaagaaatcgtccatgtattcatggcc 144178



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 96/119 (80%)
 Strand = Plus / Minus

                                                                          
Query: 225    gttgcctggacgagagaaaacaacctggtaatctccaagtgttcgtgacttgaagcaaga 284
              |||||| || ||||| || |||| |||||| | ||||||||| ||||||||||| | || 
Sbjct: 145999 gttgccaggccgagacaacacaatctggtagtttccaagtgtacgtgacttgaacccagc 145940

                                                                         
Query: 285    cgcagagaatatgaggtagtactcccagatacgcatgaacttatcatcaaagcccaggg 343
               ||  || ||||||  ||||||||||| || || |||||||| ||||| || |||||||
Sbjct: 145939 tgcgcagtatatgaaatagtactcccatatgcggatgaacttgtcatcgaatcccaggg 145881



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 61/73 (83%)
 Strand = Plus / Minus

                                                                          
Query: 366    catgaagttgtccctccagcgcatcagagtcgtgtagtaatgtggcccaatattctccac 425
              |||||||||||||| |||||| ||||| || | |||||| ||   |||||||||||||| 
Sbjct: 145680 catgaagttgtcccgccagcgtatcagcgtggggtagtagtggtacccaatattctccaa 145621

                           
Query: 426    atgctctatgctg 438
               ||||| ||||||
Sbjct: 145620 gtgctcgatgctg 145608



 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 696    tggtatttgacggtagtcgc 715
              ||||||||||||||||||||
Sbjct: 144036 tggtatttgacggtagtcgc 144017
to top
>dbj|AP004315.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0571D04
          Length = 149302

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 133/164 (81%)
 Strand = Plus / Minus

                                                                         
Query: 484   ggaaggcagccaccaggaaatatgtattcctttatgaagtccgtcctccttctgtattgc 543
             |||||||| || |||||||||||||||||||| |||||||| |  ||||| |||||||  
Sbjct: 18056 ggaaggcaacccccaggaaatatgtattccttgatgaagtctgaactcctcctgtattct 17997

                                                                         
Query: 544   tcgtaccgttcctctggagctgagatgaactggaggaccaatatgccatcttcagccaag 603
             ||||||||||| || ||    ||||||||||||||||| || | |||||| |  |||| |
Sbjct: 17996 tcgtaccgttcttcagggatggagatgaactggaggacgaacaggccatcctgtgccagg 17937

                                                         
Query: 604   taagactcacaacaggcaaaaaattcgtccatatattcatggcc 647
               |||||| || ||| | || || |||||||| |||||||||||
Sbjct: 17936 agagactcgcagcagccgaagaaatcgtccatgtattcatggcc 17893



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 96/119 (80%)
 Strand = Plus / Minus

                                                                         
Query: 225   gttgcctggacgagagaaaacaacctggtaatctccaagtgttcgtgacttgaagcaaga 284
             |||||| || ||||| || |||| |||||| | ||||||||| ||||||||||| | || 
Sbjct: 19714 gttgccaggccgagacaacacaatctggtagtttccaagtgtacgtgacttgaacccagc 19655

                                                                        
Query: 285   cgcagagaatatgaggtagtactcccagatacgcatgaacttatcatcaaagcccaggg 343
              ||  || ||||||  ||||||||||| || || |||||||| ||||| || |||||||
Sbjct: 19654 tgcgcagtatatgaaatagtactcccatatgcggatgaacttgtcatcgaatcccaggg 19596



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 61/73 (83%)
 Strand = Plus / Minus

                                                                         
Query: 366   catgaagttgtccctccagcgcatcagagtcgtgtagtaatgtggcccaatattctccac 425
             |||||||||||||| |||||| ||||| || | |||||| ||   |||||||||||||| 
Sbjct: 19395 catgaagttgtcccgccagcgtatcagcgtggggtagtagtggtacccaatattctccaa 19336

                          
Query: 426   atgctctatgctg 438
              ||||| ||||||
Sbjct: 19335 gtgctcgatgctg 19323



 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 696   tggtatttgacggtagtcgc 715
             ||||||||||||||||||||
Sbjct: 17751 tggtatttgacggtagtcgc 17732
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 48/52 (92%)
 Strand = Plus / Minus

                                                                   
Query: 301     tagtactcccagatacgcatgaacttatcatcaaagcccagggccaaaattt 352
               |||||||||||  |||| |||||||| |||||||||||||||||||||||||
Sbjct: 9539455 tagtactcccatgtacgaatgaacttctcatcaaagcccagggccaaaattt 9539404



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 63/73 (86%)
 Strand = Plus / Minus

                                                                           
Query: 366     catgaagttgtccctccagcgcatcagagtcgtgtagtaatgtggcccaatattctccac 425
               ||||||||||||||||||||| |||||||| || || |||||   |||||||||||| ||
Sbjct: 9538984 catgaagttgtccctccagcgtatcagagttgtataataatggtacccaatattctcaac 9538925

                            
Query: 426     atgctctatgctg 438
                ||||| ||||||
Sbjct: 9538924 gtgctcaatgctg 9538912



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                                
Query: 480     agaaggaaggcagccaccaggaaatatgtattc 512
               |||||||||||| |||||||| |||||||||||
Sbjct: 9538767 agaaggaaggcatccaccagggaatatgtattc 9538735
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 48/52 (92%)
 Strand = Plus / Minus

                                                                   
Query: 301     tagtactcccagatacgcatgaacttatcatcaaagcccagggccaaaattt 352
               |||||||||||  |||| |||||||| |||||||||||||||||||||||||
Sbjct: 9539340 tagtactcccatgtacgaatgaacttctcatcaaagcccagggccaaaattt 9539289



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 63/73 (86%)
 Strand = Plus / Minus

                                                                           
Query: 366     catgaagttgtccctccagcgcatcagagtcgtgtagtaatgtggcccaatattctccac 425
               ||||||||||||||||||||| |||||||| || || |||||   |||||||||||| ||
Sbjct: 9538869 catgaagttgtccctccagcgtatcagagttgtataataatggtacccaatattctcaac 9538810

                            
Query: 426     atgctctatgctg 438
                ||||| ||||||
Sbjct: 9538809 gtgctcaatgctg 9538797



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                                
Query: 480     agaaggaaggcagccaccaggaaatatgtattc 512
               |||||||||||| |||||||| |||||||||||
Sbjct: 9538652 agaaggaaggcatccaccagggaatatgtattc 9538620
to top
>emb|AL713951.4|CNS07YPU Oryza sativa chromosome 12, . BAC OJ1111_C09 of library Monsanto from
            chromosome 12 of cultivar Nipponbare of ssp. japonica of
            Oryza sativa (rice), complete sequence
          Length = 165137

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 48/52 (92%)
 Strand = Plus / Minus

                                                                
Query: 301  tagtactcccagatacgcatgaacttatcatcaaagcccagggccaaaattt 352
            |||||||||||  |||| |||||||| |||||||||||||||||||||||||
Sbjct: 2766 tagtactcccatgtacgaatgaacttctcatcaaagcccagggccaaaattt 2715



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 63/73 (86%)
 Strand = Plus / Minus

                                                                        
Query: 366  catgaagttgtccctccagcgcatcagagtcgtgtagtaatgtggcccaatattctccac 425
            ||||||||||||||||||||| |||||||| || || |||||   |||||||||||| ||
Sbjct: 2295 catgaagttgtccctccagcgtatcagagttgtataataatggtacccaatattctcaac 2236

                         
Query: 426  atgctctatgctg 438
             ||||| ||||||
Sbjct: 2235 gtgctcaatgctg 2223



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                             
Query: 480  agaaggaaggcagccaccaggaaatatgtattc 512
            |||||||||||| |||||||| |||||||||||
Sbjct: 2078 agaaggaaggcatccaccagggaatatgtattc 2046
to top
>ref|XM_478073.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2397

 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 158/200 (79%)
 Strand = Plus / Minus

                                                                        
Query: 225  gttgcctggacgagagaaaacaacctggtaatctccaagtgttcgtgacttgaagcaaga 284
            |||||| || ||||| || |||| |||||| | ||||||||| ||||||||||| | || 
Sbjct: 2343 gttgccaggccgagacaacacaatctggtagtttccaagtgtacgtgacttgaacccagc 2284

                                                                        
Query: 285  cgcagagaatatgaggtagtactcccagatacgcatgaacttatcatcaaagcccagggc 344
             ||  || ||||||  ||||||||||| || || |||||||| ||||| || ||||||| 
Sbjct: 2283 tgcgcagtatatgaaatagtactcccatatgcggatgaacttgtcatcgaatcccaggga 2224

                                                                        
Query: 345  caaaatttcatctttgttgatcatgaagttgtccctccagcgcatcagagtcgtgtagta 404
            |   || || ||| ||||   |||||||||||||| |||||| ||||| || | ||||||
Sbjct: 2223 ctttatctcttctctgttagccatgaagttgtcccgccagcgtatcagcgtggggtagta 2164

                                
Query: 405  atgtggcccaatattctcca 424
             ||   ||||||||||||||
Sbjct: 2163 gtggtacccaatattctcca 2144



 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 696  tggtatttgacggtagtcgc 715
            ||||||||||||||||||||
Sbjct: 1983 tggtatttgacggtagtcgc 1964
to top
>ref|NM_113250.2| Arabidopsis thaliana S-adenosylmethionine-dependent
            methyltransferase/ cyclopropane-fatty-acyl-phospholipid
            synthase AT3G23470 mRNA, complete cds
          Length = 1467

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                        
Query: 478  aaagaaggaaggcagccaccaggaaatatgtattcctttatgaa 521
            ||||||||||| || |||||||| |||||||||||| |||||||
Sbjct: 1106 aaagaaggaagacatccaccagggaatatgtattccgttatgaa 1063
to top
>ref|NM_113256.3| Arabidopsis thaliana cyclopropane-fatty-acyl-phospholipid synthase/
            oxidoreductase AT3G23530 mRNA, complete cds
          Length = 3148

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                        
Query: 478  aaagaaggaaggcagccaccaggaaatatgtattcctttatgaa 521
            |||||||||||||| |||||||| ||||||||||| || |||||
Sbjct: 2618 aaagaaggaaggcatccaccagggaatatgtattctttaatgaa 2575
to top
>ref|NM_113251.3| Arabidopsis thaliana S-adenosylmethionine-dependent
            methyltransferase/ cyclopropane-fatty-acyl-phospholipid
            synthase AT3G23480 mRNA, complete cds
          Length = 1640

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                        
Query: 478  aaagaaggaaggcagccaccaggaaatatgtattcctttatgaa 521
            ||||||||||| || |||||||| |||||||||||| |||||||
Sbjct: 1140 aaagaaggaagacatccaccagggaatatgtattccgttatgaa 1097
to top
>gb|BT000811.1| Arabidopsis thaliana At3g23520 mRNA sequence
          Length = 3084

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                        
Query: 478  aaagaaggaaggcagccaccaggaaatatgtattcctttatgaa 521
            |||||||||||||| |||||||| ||||||||||| || |||||
Sbjct: 2592 aaagaaggaaggcatccaccagggaatatgtattctttaatgaa 2549
to top
>gb|AY072507.1| Arabidopsis thaliana cyclopocyclopropane fatty acid synthase-like
            protein (At3g23480; MEE5.2) mRNA, complete cds
          Length = 1143

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                        
Query: 478  aaagaaggaaggcagccaccaggaaatatgtattcctttatgaa 521
            ||||||||||| || |||||||| |||||||||||| |||||||
Sbjct: 1123 aaagaaggaagacatccaccagggaatatgtattccgttatgaa 1080
to top
>gb|AY065013.1| Arabidopsis thaliana AT3g23510/MEE5_5 mRNA, complete cds
          Length = 3149

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                        
Query: 478  aaagaaggaaggcagccaccaggaaatatgtattcctttatgaa 521
            |||||||||||||| |||||||| ||||||||||| || |||||
Sbjct: 2618 aaagaaggaaggcatccaccagggaatatgtattctttaatgaa 2575
to top
>gb|AY064962.1| Arabidopsis thaliana AT3g23510/MEE5_5 mRNA, complete cds
          Length = 2988

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                        
Query: 478  aaagaaggaaggcagccaccaggaaatatgtattcctttatgaa 521
            |||||||||||||| |||||||| ||||||||||| || |||||
Sbjct: 2537 aaagaaggaaggcatccaccagggaatatgtattctttaatgaa 2494
to top
>gb|AY054671.1| Arabidopsis thaliana cyclopocyclopropane fatty acid synthase-like
            protein (At3g23480; MEE5.2) mRNA, complete cds
          Length = 1789

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                        
Query: 478  aaagaaggaaggcagccaccaggaaatatgtattcctttatgaa 521
            ||||||||||| || |||||||| |||||||||||| |||||||
Sbjct: 1196 aaagaaggaagacatccaccagggaatatgtattccgttatgaa 1153
to top
>gb|BT006344.1| Arabidopsis thaliana At3g23510/MEE5_5 gene, complete cds
          Length = 2604

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                        
Query: 478  aaagaaggaaggcagccaccaggaaatatgtattcctttatgaa 521
            |||||||||||||| |||||||| ||||||||||| || |||||
Sbjct: 2294 aaagaaggaaggcatccaccagggaatatgtattctttaatgaa 2251
to top
>emb|BX824497.1|CNS0A7DL Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH52ZB07 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1682

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                        
Query: 478  aaagaaggaaggcagccaccaggaaatatgtattcctttatgaa 521
            ||||||||||| || |||||||| |||||||||||| |||||||
Sbjct: 1202 aaagaaggaagacatccaccagggaatatgtattccgttatgaa 1159
to top
>dbj|AK176391.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL24-10-D10
          Length = 2986

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                        
Query: 478  aaagaaggaaggcagccaccaggaaatatgtattcctttatgaa 521
            |||||||||||||| |||||||| ||||||||||| || |||||
Sbjct: 2526 aaagaaggaaggcatccaccagggaatatgtattctttaatgaa 2483
to top
>dbj|AP000374.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MEE5
          Length = 20724

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                        
Query: 478  aaagaaggaaggcagccaccaggaaatatgtattcctttatgaa 521
            ||||||||||| || |||||||| |||||||||||| |||||||
Sbjct: 7229 aaagaaggaagacatccaccagggaatatgtattccgttatgaa 7186



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                        
Query: 478  aaagaaggaaggcagccaccaggaaatatgtattcctttatgaa 521
            ||||||||||| || |||||||| |||||||||||| |||||||
Sbjct: 2594 aaagaaggaagacatccaccagggaatatgtattccgttatgaa 2551



 Score = 40.1 bits (20), Expect = 9.8
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                         
Query: 478   aaagaaggaaggcagccaccaggaaatatgtattcctttatgaa 521
             |||||||||| |||  ||||||| ||||||||||| || |||||
Sbjct: 17687 aaagaaggaacgcatgcaccagggaatatgtattctttaatgaa 17644
to top
>dbj|AB023036.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MDB19
          Length = 90349

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                        
Query: 478  aaagaaggaaggcagccaccaggaaatatgtattcctttatgaa 521
            |||||||||||||| |||||||| ||||||||||| || |||||
Sbjct: 6404 aaagaaggaaggcatccaccagggaatatgtattctttaatgaa 6361
to top
>gb|BT001134.1| Arabidopsis thaliana At3g23510/MEE5_5 mRNA, complete cds
          Length = 2604

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                        
Query: 478  aaagaaggaaggcagccaccaggaaatatgtattcctttatgaa 521
            |||||||||||||| |||||||| ||||||||||| || |||||
Sbjct: 2294 aaagaaggaaggcatccaccagggaatatgtattctttaatgaa 2251
to top
>gb|BT020452.1| Arabidopsis thaliana At3g23470 mRNA, complete cds
          Length = 1386

 Score = 48.1 bits (24), Expect = 0.040
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                        
Query: 478  aaagaaggaaggcagccaccaggaaatatgtattcctttatgaa 521
            ||||||||||| || || ||||| |||||||||||| |||||||
Sbjct: 1070 aaagaaggaagacatccgccagggaatatgtattccgttatgaa 1027
to top
>gb|BT020267.1| Arabidopsis thaliana At3g23470 mRNA, complete cds
          Length = 1467

 Score = 48.1 bits (24), Expect = 0.040
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                        
Query: 478  aaagaaggaaggcagccaccaggaaatatgtattcctttatgaa 521
            ||||||||||| || || ||||| |||||||||||| |||||||
Sbjct: 1106 aaagaaggaagacatccgccagggaatatgtattccgttatgaa 1063
to top
>gb|AC168277.2| Mus musculus  BAC RP24-186L17 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 155635

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 262   agtgttcgtgacttgaagcaag 283
             ||||||||||||||||||||||
Sbjct: 23175 agtgttcgtgacttgaagcaag 23154
to top
>gb|AY574038.1| Gossypium hirsutum cyclopropane fatty acid synthase (CPA-FAS-3) mRNA,
            complete cds
          Length = 2912

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 70/86 (81%)
 Strand = Plus / Minus

                                                                        
Query: 475  gccaaagaaggaaggcagccaccaggaaatatgtattcctttatgaagtccgtcctcctt 534
            |||| |||||| | ||| |||||||| || ||||||||||| ||||| ||||  || |  
Sbjct: 2408 gccagagaaggtaagcatccaccagggaagatgtattccttgatgaaatccgagcttcgc 2349

                                      
Query: 535  ctgtattgctcgtaccgttcctctgg 560
            |||||||  | |||||||||||||||
Sbjct: 2348 ctgtattcattgtaccgttcctctgg 2323
to top
>emb|AL359074.12| Human DNA sequence from clone RP11-137L10 on chromosome 10 Contains the
             5' end of the PPP3CB gene for protein phosphatase 3
             (formerly 2B) catalytic subunit beta isoform (calcineurin
             A beta), two novel genes (FLJ37318), the 3' end of a novel
             gene, a ribosomal protein S26 (RPS26) pseudogene and a CpG
             island, complete sequence
          Length = 152161

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 241   aaaacaacctggtaatctccaa 262
             ||||||||||||||||||||||
Sbjct: 43260 aaaacaacctggtaatctccaa 43281
to top
>emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome
          Length = 3523383

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 98      attattggcaaatacgtagaaa 119
               ||||||||||||||||||||||
Sbjct: 1240784 attattggcaaatacgtagaaa 1240805
to top
>gb|AC073389.10| Homo sapiens chromosome 10 clone RP11-464F9, complete sequence
          Length = 190681

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 241    aaaacaacctggtaatctccaa 262
              ||||||||||||||||||||||
Sbjct: 177522 aaaacaacctggtaatctccaa 177501
to top
>gb|AC153601.6| Mus musculus 6 BAC RP23-405O6 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 201911

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 262   agtgttcgtgacttgaagcaag 283
             ||||||||||||||||||||||
Sbjct: 91276 agtgttcgtgacttgaagcaag 91255
to top
>emb|AL929447.7| Mouse DNA sequence from clone RP23-360O17 on chromosome 4, complete
             sequence
          Length = 36704

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 32/34 (94%), Gaps = 1/34 (2%)
 Strand = Plus / Minus

                                               
Query: 349   atttcatctttgttgatcatgaagttgtccctcc 382
             |||||||||||| ||||||||||| |||||||||
Sbjct: 23235 atttcatctttgatgatcatgaag-tgtccctcc 23203
to top
>emb|AL121718.8|HSJ390M24 Human DNA sequence from clone RP3-390M24 on chromosome 6 Contains part
             of a novel gene, complete sequence
          Length = 73095

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 342   ggccaaaatttcatctttgtt 362
             |||||||||||||||||||||
Sbjct: 17913 ggccaaaatttcatctttgtt 17933
to top
>emb|BX825815.1|CNS0A7J8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL64ZF05 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 565

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 493 ccaccaggaaatatgtattcctttatgaa 521
           |||||||| ||||||||||| ||||||||
Sbjct: 63  ccaccagggaatatgtattcttttatgaa 35
to top
>emb|BX822760.1|CNS0A5XU Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB62ZD04 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1371

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 493 ccaccaggaaatatgtattcctttatgaa 521
           |||||||| ||||||||||| ||||||||
Sbjct: 956 ccaccagggaatatgtattcttttatgaa 928
to top
>dbj|AB015474.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MLM24
          Length = 87487

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 493   ccaccaggaaatatgtattcctttatgaa 521
             |||||||| ||||||||||| ||||||||
Sbjct: 86236 ccaccagggaatatgtattcttttatgaa 86208
to top
>gb|AE014299.1| Shewanella oneidensis MR-1, complete genome
          Length = 4969803

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 604     taagactcacaacaggcaaaa 624
               |||||||||||||||||||||
Sbjct: 1386021 taagactcacaacaggcaaaa 1386001
to top
>ref|NM_113254.2| Arabidopsis thaliana cyclopropane-fatty-acyl-phospholipid synthase/
            oxidoreductase AT3G23510 mRNA, complete cds
          Length = 3062

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                        
Query: 478  aaagaaggaaggcagccaccaggaaatatgtattcctttatgaa 521
            |||||||||| |||  ||||||| ||||||||||| || |||||
Sbjct: 2597 aaagaaggaacgcatgcaccagggaatatgtattctttaatgaa 2554
to top
>gb|AC116697.7| Mus musculus chromosome 3, clone RP24-444C12, complete sequence
          Length = 183146

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 344   ccaaaatttcatctttgttg 363
             ||||||||||||||||||||
Sbjct: 77402 ccaaaatttcatctttgttg 77383
to top
>gb|AC122541.3| Mus musculus BAC clone RP24-567D4 from chromosome 5, complete sequence
          Length = 166883

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 126    aagcaaaggtggaacaggct 145
              ||||||||||||||||||||
Sbjct: 148839 aagcaaaggtggaacaggct 148858
to top
>gb|AC138679.10| Mus musculus chromosome 5, clone RP23-177I4, complete sequence
          Length = 230184

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 126    aagcaaaggtggaacaggct 145
              ||||||||||||||||||||
Sbjct: 206193 aagcaaaggtggaacaggct 206174
to top
>gb|AC126544.5| Homo sapiens chromosome 17, clone RP11-707O23, complete sequence
          Length = 172940

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 474    ggccaaagaaggaaggcagc 493
              ||||||||||||||||||||
Sbjct: 151035 ggccaaagaaggaaggcagc 151016
to top
>gb|AC098717.3| Mus musculus BAC clone RP23-2G2 from 12, complete sequence
          Length = 211702

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 479    aagaaggaaggcagccacca 498
              ||||||||||||||||||||
Sbjct: 101873 aagaaggaaggcagccacca 101854
to top
>gb|AC146076.2| Pan troglodytes BAC clone RP43-15J5 from 7, complete sequence
          Length = 161297

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 339   cagggccaaaatttcatctttgtt 362
             ||||||||||||||| ||||||||
Sbjct: 84513 cagggccaaaatttcttctttgtt 84536
to top
>gb|AC095044.3| Homo sapiens BAC clone RP11-132B16 from 7, complete sequence
          Length = 134184

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 502    aatatgtattcctttatgaa 521
              ||||||||||||||||||||
Sbjct: 117689 aatatgtattcctttatgaa 117708
to top
>emb|AL512452.7| Human DNA sequence from clone RP11-520F22 on chromosome 13, complete
              sequence
          Length = 141913

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 116    gaaataactaaagcaaaggtggaa 139
              |||||||||||| |||||||||||
Sbjct: 123562 gaaataactaaaccaaaggtggaa 123539
to top
>emb|AL365199.11| Human DNA sequence from clone RP11-124O11 on chromosome 10 Contains
            two novel genes (FLJ36774) and five CpG islands, complete
            sequence
          Length = 158335

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 350  tttcatctttgttgatcatg 369
            ||||||||||||||||||||
Sbjct: 8893 tttcatctttgttgatcatg 8912
to top
>emb|AL117337.26|HSA393J16 Human DNA sequence from clone RP11-393J16 on chromosome 10 Contains a
             zinc finger protein pseudogene, the ZNF25 gene for zinc
             finger protein 25 (KOX 19), the 5' end of the ZNF33A gene
             for zinc finger protein 33a (KOX 31) and two CpG islands,
             complete sequence
          Length = 161452

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 339   cagggccaaaatttcatctttgtt 362
             ||||||||||||||| ||||||||
Sbjct: 51220 cagggccaaaatttcttctttgtt 51197
to top
>emb|X15311.1|RESSAVPO Woolly monkey sarcoma virus SSAV provirus pol gene for reverse
           transcriptase (part.)
          Length = 1431

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 339 cagggccaaaatttcatctttgtt 362
           ||||||||||||||| ||||||||
Sbjct: 931 cagggccaaaatttcttctttgtt 908
to top
>gb|AC106030.5| Homo sapiens chromosome 17, clone CTD-3070M1, complete sequence
          Length = 111120

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 474    ggccaaagaaggaaggcagc 493
              ||||||||||||||||||||
Sbjct: 102293 ggccaaagaaggaaggcagc 102312
to top
>gb|AF321984.1|AF321984 Lycopersicon esculentum lethal leaf spot 1-like protein mRNA,
            complete cds
          Length = 1717

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 346  aaaatttcatctttgttgat 365
            ||||||||||||||||||||
Sbjct: 1626 aaaatttcatctttgttgat 1645
to top
>gb|AC092364.3| Homo sapiens chromosome 19 clone RP11-420K14, complete sequence
          Length = 170470

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 339   cagggccaaaatttcatctttgtt 362
             ||||||||||||||| ||||||||
Sbjct: 53362 cagggccaaaatttcttctttgtt 53385
to top
>gb|AC008270.3| Homo sapiens BAC clone RP11-111G16 from 2, complete sequence
          Length = 167733

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 479    aagaaggaaggcagccacca 498
              ||||||||||||||||||||
Sbjct: 164604 aagaaggaaggcagccacca 164623
to top
>gb|AC009533.10| Homo sapiens 12 BAC RP11-22B23 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 162572

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 339   cagggccaaaatttcatctttgtt 362
             ||||||||||||||| ||||||||
Sbjct: 56560 cagggccaaaatttcttctttgtt 56537
to top
>dbj|AK117243.1| Arabidopsis thaliana At3g23510 mRNA for putative
            cyclopropane-fatty-acyl-phospholipid synthase, complete
            cds, clone: RAFL16-79-F04
          Length = 3062

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                        
Query: 478  aaagaaggaaggcagccaccaggaaatatgtattcctttatgaa 521
            |||||||||| |||  ||||||| ||||||||||| || |||||
Sbjct: 2597 aaagaaggaacgcatgcaccagggaatatgtattctttaatgaa 2554
to top
>gb|AF205588.1|AF205588 Homo sapiens ZNF01 and HUMORFKG1B genes, partial sequence, complete
              sequence
          Length = 312283

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 339    cagggccaaaatttcatctttgtt 362
              ||||||||||||||| ||||||||
Sbjct: 130738 cagggccaaaatttcttctttgtt 130715
to top
>emb|CT010460.16| Mouse DNA sequence from clone RP23-311G21 on chromosome 12, complete
              sequence
          Length = 243288

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 479    aagaaggaaggcagccacca 498
              ||||||||||||||||||||
Sbjct: 175404 aagaaggaaggcagccacca 175423
to top
>dbj|AP005364.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1970D8, complete
             sequence
          Length = 168850

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 421   tccacatgctctatgctgaa 440
             ||||||||||||||||||||
Sbjct: 97050 tccacatgctctatgctgaa 97031
to top
>gb|AC131803.3| Mus musculus BAC clone RP24-549I15 from chromosome 5, complete
            sequence
          Length = 168439

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 126  aagcaaaggtggaacaggct 145
            ||||||||||||||||||||
Sbjct: 2233 aagcaaaggtggaacaggct 2252
to top
>gb|AC004703.1|AC004703 Homo sapiens chromosome 17, clone hRPC.1164_O_3, complete sequence
          Length = 104147

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 474  ggccaaagaaggaaggcagc 493
            ||||||||||||||||||||
Sbjct: 3773 ggccaaagaaggaaggcagc 3792
to top
>emb|BX005021.4| Zebrafish DNA sequence from clone DKEY-69D12, complete sequence
          Length = 188337

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 33     ataaaagtacacacatcctt 52
              ||||||||||||||||||||
Sbjct: 184522 ataaaagtacacacatcctt 184503
to top
>emb|BX005168.10| Mouse DNA sequence from clone RP23-204O8 on chromosome X, complete
              sequence
          Length = 143588

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 670    cttatgattgcaccatactt 689
              ||||||||||||||||||||
Sbjct: 111908 cttatgattgcaccatactt 111889
to top
>emb|Z70664.1|HERVHC2 Human endogenous retroviral element HC2
          Length = 6069

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 339  cagggccaaaatttcatctttgtt 362
            ||||||||||||||| ||||||||
Sbjct: 4257 cagggccaaaatttcttctttgtt 4234
to top
>gb|M26927.1|PCGGPE Gibbon ape leukemia virus gag, pol, and env genes, complete cds
          Length = 8088

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 339  cagggccaaaatttcatctttgtt 362
            ||||||||||||||| ||||||||
Sbjct: 4401 cagggccaaaatttcctctttgtt 4378
to top
>dbj|AP005229.2| Homo sapiens genomic DNA, chromosome 18, clone:RP11-128P17, complete
             sequence
          Length = 129326

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 409   ggcccaatattctccacatg 428
             ||||||||||||||||||||
Sbjct: 72485 ggcccaatattctccacatg 72504


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,470,819
Number of Sequences: 3902068
Number of extensions: 6470819
Number of successful extensions: 139662
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 139336
Number of HSP's gapped (non-prelim): 311
length of query: 715
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 692
effective length of database: 17,143,297,704
effective search space: 11863162011168
effective search space used: 11863162011168
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top