ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags30h01 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_481483.1| Oryza sativa (japonica cultivar-group), mRNA Length = 981 Score = 404 bits (204), Expect = e-109 Identities = 390/452 (86%) Strand = Plus / Minus Query: 212 atctttatgttgaaatactcaggatcaaaatggtgtagcctgacatatccatcctcaccg 271 ||||| |||||||| || |||| |||||||||||| ||||| ||||||||||| ||||| Sbjct: 977 atcttgatgttgaagtagtcagaatcaaaatggtgcagccttacatatccatcttcacca 918 Query: 272 ccactcgaaaagctcctcccatcaggattaaatgctaatgcattgattggtccaaaatgt 331 |||||||||||||||| |||||||||||||||||| | || || |||||||||||||| Sbjct: 917 ccactcgaaaagctccgcccatcaggattaaatgccagcgcgttaattggtccaaaatgg 858 Query: 332 cctttaacaccaccaatctcttcttctaaaatcttgtggaaaaatttcgcctcgaattta 391 ||||||||||||||||| || |||| ||||||||||| ||||||||||| || ||||| Sbjct: 857 cctttaacaccaccaatttcctcttgcaaaatcttgtgaaaaaatttcgcttcaaatttt 798 Query: 392 cctgcacggcgatctgtcatggtaacattcatagcatcctgacctcctccaataaccaca 451 |||||||| ||||||||||| || |||||||| ||||| ||||| ||||||||||||||| Sbjct: 797 cctgcacgacgatctgtcatagtcacattcatcgcatcttgaccacctccaataaccaca 738 Query: 452 tgatcaagagtaggagatatatcaacagcattaaccggtctttctgtgacatatgtcttt 511 || |||||| |||||| || |||||||||||||| |||| || |||||||||||||| Sbjct: 737 tggtcaagaagaggagaaatgtcaacagcattaacaggtcgctcagtgacatatgtcttg 678 Query: 512 atcagggtcagtgttcttgcatcccacagcttagcagatttatccaaggaacctgtgagg 571 ||||| ||||| ||||||| |||||| ||||||||||| ||||||||||| ||||| ||| Sbjct: 677 atcagcgtcagagttcttgtatcccatagcttagcagacttatccaaggagcctgttagg 618 Query: 572 aaatgagaccaatctaaggattttgacagtgagctaattgccttctgatgtccaacctcc 631 ||||| ||||||||| |||||||| ||||| |||||| ||||||||||| ||| Sbjct: 617 aaatgcgaccaatctgcagattttgaaagtgaagtaattgttttctgatgtccttgctct 558 Query: 632 ttgtctgactccttcagaagttttccagtctc 663 |||||||||||||||||| || ||||||||| Sbjct: 557 ttgtctgactccttcagacattgtccagtctc 526
>dbj|AK122060.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033115B09, full insert sequence Length = 1437 Score = 404 bits (204), Expect = e-109 Identities = 390/452 (86%) Strand = Plus / Minus Query: 212 atctttatgttgaaatactcaggatcaaaatggtgtagcctgacatatccatcctcaccg 271 ||||| |||||||| || |||| |||||||||||| ||||| ||||||||||| ||||| Sbjct: 1126 atcttgatgttgaagtagtcagaatcaaaatggtgcagccttacatatccatcttcacca 1067 Query: 272 ccactcgaaaagctcctcccatcaggattaaatgctaatgcattgattggtccaaaatgt 331 |||||||||||||||| |||||||||||||||||| | || || |||||||||||||| Sbjct: 1066 ccactcgaaaagctccgcccatcaggattaaatgccagcgcgttaattggtccaaaatgg 1007 Query: 332 cctttaacaccaccaatctcttcttctaaaatcttgtggaaaaatttcgcctcgaattta 391 ||||||||||||||||| || |||| ||||||||||| ||||||||||| || ||||| Sbjct: 1006 cctttaacaccaccaatttcctcttgcaaaatcttgtgaaaaaatttcgcttcaaatttt 947 Query: 392 cctgcacggcgatctgtcatggtaacattcatagcatcctgacctcctccaataaccaca 451 |||||||| ||||||||||| || |||||||| ||||| ||||| ||||||||||||||| Sbjct: 946 cctgcacgacgatctgtcatagtcacattcatcgcatcttgaccacctccaataaccaca 887 Query: 452 tgatcaagagtaggagatatatcaacagcattaaccggtctttctgtgacatatgtcttt 511 || |||||| |||||| || |||||||||||||| |||| || |||||||||||||| Sbjct: 886 tggtcaagaagaggagaaatgtcaacagcattaacaggtcgctcagtgacatatgtcttg 827 Query: 512 atcagggtcagtgttcttgcatcccacagcttagcagatttatccaaggaacctgtgagg 571 ||||| ||||| ||||||| |||||| ||||||||||| ||||||||||| ||||| ||| Sbjct: 826 atcagcgtcagagttcttgtatcccatagcttagcagacttatccaaggagcctgttagg 767 Query: 572 aaatgagaccaatctaaggattttgacagtgagctaattgccttctgatgtccaacctcc 631 ||||| ||||||||| |||||||| ||||| |||||| ||||||||||| ||| Sbjct: 766 aaatgcgaccaatctgcagattttgaaagtgaagtaattgttttctgatgtccttgctct 707 Query: 632 ttgtctgactccttcagaagttttccagtctc 663 |||||||||||||||||| || ||||||||| Sbjct: 706 ttgtctgactccttcagacattgtccagtctc 675
>dbj|AK104927.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-H11, full insert sequence Length = 1395 Score = 337 bits (170), Expect = 3e-89 Identities = 383/454 (84%) Strand = Plus / Minus Query: 212 atctttatgttgaaatactcaggatcaaaatggtgtagcctgacatatccatcctcaccg 271 ||||| |||||||| || |||| |||||||||||| ||||| ||||||||||| ||||| Sbjct: 1100 atcttgatgttgaagtagtcagaatcaaaatggtgcagccttacatatccatcttcacca 1041 Query: 272 ccactcgaaaagctcctcccatcaggattaaatgctaatgcattgattggtccaaaatgt 331 |||||||| ||||||| ||||||||||||||||| | ||| || |||||||||||||| Sbjct: 1040 ccactcgagaagctccgtccatcaggattaaatgccagtgcgttaattggtccaaaatgg 981 Query: 332 cctttaacaccaccaatctcttcttctaaaatcttgtggaaaaatttcgcctcgaattta 391 ||||| ||||||||||| || |||| ||||||||||| || |||||||| || ||||| Sbjct: 980 ccttttacaccaccaatttcctcttgcaaaatcttgtgaaagaatttcgcttcaaatttt 921 Query: 392 cctgcacggcgatctgtcatggtaacattcatagcatcctgacctcctccaataaccaca 451 || || || ||||||||||| || |||||||| ||||| ||||| ||||| ||||||||| Sbjct: 920 cccgctcgacgatctgtcatagtcacattcatcgcatcttgaccacctccgataaccaca 861 Query: 452 tgatcaagagtaggagatatatcaacagcattaaccggtctttctgtgacatatgtcttt 511 || || ||| |||||| || |||||||||||||| |||| || |||||||||||||| Sbjct: 860 tggtctagaagaggagaaatgtcaacagcattaacaggtcgctcggtgacatatgtcttg 801 Query: 512 atcagggtcagtgttcttgcatcccacagcttagcagatttatccaaggaacctgtgagg 571 ||||||||||| ||||||| |||||| ||||||||||| ||||||||||| ||||| ||| Sbjct: 800 atcagggtcagagttcttgtatcccatagcttagcagacttatccaaggagcctgttagg 741 Query: 572 aaatgagaccaatctaaggattttgacagtgagctaattgccttctgatgtccaacctcc 631 ||||| ||||||||| |||||||| ||||| |||||| ||||| ||||| || Sbjct: 740 aaatgtgaccaatctgcagattttgaaagtgaagtaattgttttctggtgtccttgttct 681 Query: 632 ttgtctgactccttcagaagttttccagtctcag 665 ||||||||||| |||||| | |||||||||||| Sbjct: 680 ttgtctgactcattcagacatgttccagtctcag 647
>dbj|AK111524.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002P07, full insert sequence Length = 1396 Score = 321 bits (162), Expect = 2e-84 Identities = 381/454 (83%) Strand = Plus / Minus Query: 212 atctttatgttgaaatactcaggatcaaaatggtgtagcctgacatatccatcctcaccg 271 ||||| |||||||| || |||| |||||||||||| ||||| ||||||||||| ||||| Sbjct: 1101 atcttgatgttgaagtagtcagaatcaaaatggtgcagccttacatatccatcttcacca 1042 Query: 272 ccactcgaaaagctcctcccatcaggattaaatgctaatgcattgattggtccaaaatgt 331 |||||||| |||| || ||||||||||||||||| | ||| || |||||||||||||| Sbjct: 1041 ccactcgagaagccccgtccatcaggattaaatgccagtgcgttaattggtccaaaatgg 982 Query: 332 cctttaacaccaccaatctcttcttctaaaatcttgtggaaaaatttcgcctcgaattta 391 ||||| ||||||||||| || |||| ||||||||||| || |||||||| || ||||| Sbjct: 981 ccttttacaccaccaatttcctcttgcaaaatcttgtgaaagaatttcgcttcaaatttt 922 Query: 392 cctgcacggcgatctgtcatggtaacattcatagcatcctgacctcctccaataaccaca 451 || || || |||||||||| || |||||||| ||||| ||||| ||||| ||||||||| Sbjct: 921 cccgctcgatgatctgtcatagtcacattcatcgcatcttgaccacctccgataaccaca 862 Query: 452 tgatcaagagtaggagatatatcaacagcattaaccggtctttctgtgacatatgtcttt 511 || || ||| |||||| || |||||||||||||| |||| || |||||||||||||| Sbjct: 861 tggtctagaagaggagaaatgtcaacagcattaacaggtcgctcggtgacatatgtcttg 802 Query: 512 atcagggtcagtgttcttgcatcccacagcttagcagatttatccaaggaacctgtgagg 571 ||||||||||| ||||||| |||||| ||||||||||| ||||||||||| ||||| ||| Sbjct: 801 atcagggtcagagttcttgtatcccatagcttagcagacttatccaaggagcctgttagg 742 Query: 572 aaatgagaccaatctaaggattttgacagtgagctaattgccttctgatgtccaacctcc 631 ||||| ||||||||| |||||||| ||||| |||||| ||||| ||||| || Sbjct: 741 aaatgtgaccaatctgcagattttgaaagtgaagtaattgttttctggtgtccttgttct 682 Query: 632 ttgtctgactccttcagaagttttccagtctcag 665 ||||||||||| |||||| | |||||||||||| Sbjct: 681 ttgtctgactcattcagacatgttccagtctcag 648
>gb|AY111787.1| Zea mays CL11185_1 mRNA sequence Length = 623 Score = 178 bits (90), Expect = 2e-41 Identities = 215/257 (83%) Strand = Plus / Plus Query: 230 tcaggatcaaaatggtgtagcctgacatatccatcctcaccgccactcgaaaagctcctc 289 |||| ||||||||| || ||||| ||||||||||| ||||| ||||| |||||||||| | Sbjct: 367 tcagaatcaaaatgatgcagccttacatatccatcttcaccaccacttgaaaagctccgc 426 Query: 290 ccatcaggattaaatgctaatgcattgattggtccaaaatgtcctttaacaccaccaatc 349 ||||||||||||||||| || ||||| ||||| |||||||| ||||||||||||||||| Sbjct: 427 ccatcaggattaaatgccaaagcattaattggcccaaaatgccctttaacaccaccaatt 486 Query: 350 tcttcttctaaaatcttgtggaaaaatttcgcctcgaatttacctgcacggcgatctgtc 409 || |||| ||||||||| || | ||||| ||||| |||||||| |||||||| | | | Sbjct: 487 tcctcttgcaaaatcttgcggtagaatttagcctcaaatttaccagcacggcgggcagcc 546 Query: 410 atggtaacattcatagcatcctgacctcctccaataaccacatgatcaagagtaggagat 469 || || |||||||| ||||||||||| ||| | | ||||||| || | |||| ||||| Sbjct: 547 atagtcacattcattgcatcctgaccacctnctaaaaccacagtattatgagtgggagag 606 Query: 470 atatcaacagcattaac 486 || || ||||||||||| Sbjct: 607 atgtccacagcattaac 623
>gb|BT018726.1| Zea mays clone EL01N0518F09.d mRNA sequence Length = 1706 Score = 95.6 bits (48), Expect = 2e-16 Identities = 93/108 (86%) Strand = Plus / Minus Query: 284 ctcctcccatcaggattaaatgctaatgcattgattggtccaaaatgtcctttaacacca 343 |||| |||||||||||||||||| || ||||| ||||| |||||||| |||||||||||| Sbjct: 117 ctccgcccatcaggattaaatgccaaagcattaattggcccaaaatgccctttaacacca 58 Query: 344 ccaatctcttcttctaaaatcttgtggaaaaatttcgcctcgaattta 391 ||||| || | || |||||||||||| | ||||| ||||| |||||| Sbjct: 57 ccaatttcctgttgcaaaatcttgtggtagaatttagcctcaaattta 10 Score = 56.0 bits (28), Expect = 2e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 230 tcaggatcaaaatggtgtagcctgacatatccatcctcaccgccactcgaaaagct 285 |||| ||||||||| || ||||| ||||||||||| ||||| ||||| |||||||| Sbjct: 1202 tcagaatcaaaatgatgcagccttacatatccatcttcaccaccacttgaaaagct 1147
>gb|AY360388.2| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0038J12, complete sequence Length = 131944 Score = 93.7 bits (47), Expect = 7e-16 Identities = 77/87 (88%) Strand = Plus / Minus Query: 364 cttgtggaaaaatttcgcctcgaatttacctgcacggcgatctgtcatggtaacattcat 423 |||||| ||||||||||| || ||||| |||||||| ||||||||||| || |||||||| Sbjct: 117517 cttgtgaaaaaatttcgcttcaaattttcctgcacgacgatctgtcatagtcacattcat 117458 Query: 424 agcatcctgacctcctccaataaccac 450 ||||| ||||| |||||||||||||| Sbjct: 117457 cgcatcttgaccacctccaataaccac 117431 Score = 91.7 bits (46), Expect = 3e-15 Identities = 103/122 (84%) Strand = Plus / Minus Query: 541 cttagcagatttatccaaggaacctgtgaggaaatgagaccaatctaaggattttgacag 600 ||||||||| ||||||||||| ||||| |||||||| ||||||||| |||||||| || Sbjct: 114212 cttagcagacttatccaaggagcctgttaggaaatgcgaccaatctgcagattttgaaag 114153 Query: 601 tgagctaattgccttctgatgtccaacctccttgtctgactccttcagaagttttccagt 660 ||| |||||| ||||||||||| ||| |||||||||||||||||| || |||||| Sbjct: 114152 tgaagtaattgttttctgatgtccttgctctttgtctgactccttcagacattgtccagt 114093 Query: 661 ct 662 || Sbjct: 114092 ct 114091 Score = 83.8 bits (42), Expect = 7e-13 Identities = 66/74 (89%) Strand = Plus / Minus Query: 212 atctttatgttgaaatactcaggatcaaaatggtgtagcctgacatatccatcctcaccg 271 ||||| |||||||| || |||| |||||||||||| ||||| ||||||||||| ||||| Sbjct: 118965 atcttgatgttgaagtagtcagaatcaaaatggtgcagccttacatatccatcttcacca 118906 Query: 272 ccactcgaaaagct 285 |||||||||||||| Sbjct: 118905 ccactcgaaaagct 118892 Score = 75.8 bits (38), Expect = 2e-10 Identities = 71/82 (86%) Strand = Plus / Minus Query: 284 ctcctcccatcaggattaaatgctaatgcattgattggtccaaaatgtcctttaacacca 343 |||| |||||||||||||||||| | || || |||||||||||||| |||||||||||| Sbjct: 117714 ctccgcccatcaggattaaatgccagcgcgttaattggtccaaaatggcctttaacacca 117655 Query: 344 ccaatctcttcttctaaaatct 365 ||||| || |||| ||||||| Sbjct: 117654 ccaatttcctcttgcaaaatct 117633 Score = 75.8 bits (38), Expect = 2e-10 Identities = 80/94 (85%) Strand = Plus / Minus Query: 449 acatgatcaagagtaggagatatatcaacagcattaaccggtctttctgtgacatatgtc 508 ||||| |||||| |||||| || |||||||||||||| |||| || |||||||||||| Sbjct: 114407 acatggtcaagaagaggagaaatgtcaacagcattaacaggtcgctcagtgacatatgtc 114348 Query: 509 tttatcagggtcagtgttcttgcatcccacagct 542 || ||||| ||||| ||||||| |||||| |||| Sbjct: 114347 ttgatcagcgtcagagttcttgtatcccatagct 114314
>gb|AY360389.1| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0024A05, complete sequence Length = 82985 Score = 93.7 bits (47), Expect = 7e-16 Identities = 77/87 (88%) Strand = Plus / Minus Query: 364 cttgtggaaaaatttcgcctcgaatttacctgcacggcgatctgtcatggtaacattcat 423 |||||| ||||||||||| || ||||| |||||||| ||||||||||| || |||||||| Sbjct: 12036 cttgtgaaaaaatttcgcttcaaattttcctgcacgacgatctgtcatagtcacattcat 11977 Query: 424 agcatcctgacctcctccaataaccac 450 ||||| ||||| |||||||||||||| Sbjct: 11976 cgcatcttgaccacctccaataaccac 11950 Score = 91.7 bits (46), Expect = 3e-15 Identities = 103/122 (84%) Strand = Plus / Minus Query: 541 cttagcagatttatccaaggaacctgtgaggaaatgagaccaatctaaggattttgacag 600 ||||||||| ||||||||||| ||||| |||||||| ||||||||| |||||||| || Sbjct: 8731 cttagcagacttatccaaggagcctgttaggaaatgcgaccaatctgcagattttgaaag 8672 Query: 601 tgagctaattgccttctgatgtccaacctccttgtctgactccttcagaagttttccagt 660 ||| |||||| ||||||||||| ||| |||||||||||||||||| || |||||| Sbjct: 8671 tgaagtaattgttttctgatgtccttgctctttgtctgactccttcagacattgtccagt 8612 Query: 661 ct 662 || Sbjct: 8611 ct 8610 Score = 83.8 bits (42), Expect = 7e-13 Identities = 66/74 (89%) Strand = Plus / Minus Query: 212 atctttatgttgaaatactcaggatcaaaatggtgtagcctgacatatccatcctcaccg 271 ||||| |||||||| || |||| |||||||||||| ||||| ||||||||||| ||||| Sbjct: 13484 atcttgatgttgaagtagtcagaatcaaaatggtgcagccttacatatccatcttcacca 13425 Query: 272 ccactcgaaaagct 285 |||||||||||||| Sbjct: 13424 ccactcgaaaagct 13411 Score = 75.8 bits (38), Expect = 2e-10 Identities = 71/82 (86%) Strand = Plus / Minus Query: 284 ctcctcccatcaggattaaatgctaatgcattgattggtccaaaatgtcctttaacacca 343 |||| |||||||||||||||||| | || || |||||||||||||| |||||||||||| Sbjct: 12233 ctccgcccatcaggattaaatgccagcgcgttaattggtccaaaatggcctttaacacca 12174 Query: 344 ccaatctcttcttctaaaatct 365 ||||| || |||| ||||||| Sbjct: 12173 ccaatttcctcttgcaaaatct 12152 Score = 75.8 bits (38), Expect = 2e-10 Identities = 80/94 (85%) Strand = Plus / Minus Query: 449 acatgatcaagagtaggagatatatcaacagcattaaccggtctttctgtgacatatgtc 508 ||||| |||||| |||||| || |||||||||||||| |||| || |||||||||||| Sbjct: 8926 acatggtcaagaagaggagaaatgtcaacagcattaacaggtcgctcagtgacatatgtc 8867 Query: 509 tttatcagggtcagtgttcttgcatcccacagct 542 || ||||| ||||| ||||||| |||||| |||| Sbjct: 8866 ttgatcagcgtcagagttcttgtatcccatagct 8833
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 93.7 bits (47), Expect = 7e-16 Identities = 77/87 (88%) Strand = Plus / Plus Query: 364 cttgtggaaaaatttcgcctcgaatttacctgcacggcgatctgtcatggtaacattcat 423 |||||| ||||||||||| || ||||| |||||||| ||||||||||| || |||||||| Sbjct: 12901654 cttgtgaaaaaatttcgcttcaaattttcctgcacgacgatctgtcatagtcacattcat 12901713 Query: 424 agcatcctgacctcctccaataaccac 450 ||||| ||||| |||||||||||||| Sbjct: 12901714 cgcatcttgaccacctccaataaccac 12901740 Score = 91.7 bits (46), Expect = 3e-15 Identities = 103/122 (84%) Strand = Plus / Plus Query: 541 cttagcagatttatccaaggaacctgtgaggaaatgagaccaatctaaggattttgacag 600 ||||||||| ||||||||||| ||||| |||||||| ||||||||| |||||||| || Sbjct: 12904959 cttagcagacttatccaaggagcctgttaggaaatgcgaccaatctgcagattttgaaag 12905018 Query: 601 tgagctaattgccttctgatgtccaacctccttgtctgactccttcagaagttttccagt 660 ||| |||||| ||||||||||| ||| |||||||||||||||||| || |||||| Sbjct: 12905019 tgaagtaattgttttctgatgtccttgctctttgtctgactccttcagacattgtccagt 12905078 Query: 661 ct 662 || Sbjct: 12905079 ct 12905080 Score = 83.8 bits (42), Expect = 7e-13 Identities = 66/74 (89%) Strand = Plus / Plus Query: 212 atctttatgttgaaatactcaggatcaaaatggtgtagcctgacatatccatcctcaccg 271 ||||| |||||||| || |||| |||||||||||| ||||| ||||||||||| ||||| Sbjct: 12900206 atcttgatgttgaagtagtcagaatcaaaatggtgcagccttacatatccatcttcacca 12900265 Query: 272 ccactcgaaaagct 285 |||||||||||||| Sbjct: 12900266 ccactcgaaaagct 12900279 Score = 75.8 bits (38), Expect = 2e-10 Identities = 80/94 (85%) Strand = Plus / Plus Query: 449 acatgatcaagagtaggagatatatcaacagcattaaccggtctttctgtgacatatgtc 508 ||||| |||||| |||||| || |||||||||||||| |||| || |||||||||||| Sbjct: 12904764 acatggtcaagaagaggagaaatgtcaacagcattaacaggtcgctcagtgacatatgtc 12904823 Query: 509 tttatcagggtcagtgttcttgcatcccacagct 542 || ||||| ||||| ||||||| |||||| |||| Sbjct: 12904824 ttgatcagcgtcagagttcttgtatcccatagct 12904857 Score = 75.8 bits (38), Expect = 2e-10 Identities = 71/82 (86%) Strand = Plus / Plus Query: 284 ctcctcccatcaggattaaatgctaatgcattgattggtccaaaatgtcctttaacacca 343 |||| |||||||||||||||||| | || || |||||||||||||| |||||||||||| Sbjct: 12901457 ctccgcccatcaggattaaatgccagcgcgttaattggtccaaaatggcctttaacacca 12901516 Query: 344 ccaatctcttcttctaaaatct 365 ||||| || |||| ||||||| Sbjct: 12901517 ccaatttcctcttgcaaaatct 12901538
>dbj|AP006480.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone: B1052H09 Length = 190806 Score = 93.7 bits (47), Expect = 7e-16 Identities = 77/87 (88%) Strand = Plus / Plus Query: 364 cttgtggaaaaatttcgcctcgaatttacctgcacggcgatctgtcatggtaacattcat 423 |||||| ||||||||||| || ||||| |||||||| ||||||||||| || |||||||| Sbjct: 38634 cttgtgaaaaaatttcgcttcaaattttcctgcacgacgatctgtcatagtcacattcat 38693 Query: 424 agcatcctgacctcctccaataaccac 450 ||||| ||||| |||||||||||||| Sbjct: 38694 cgcatcttgaccacctccaataaccac 38720 Score = 91.7 bits (46), Expect = 3e-15 Identities = 103/122 (84%) Strand = Plus / Plus Query: 541 cttagcagatttatccaaggaacctgtgaggaaatgagaccaatctaaggattttgacag 600 ||||||||| ||||||||||| ||||| |||||||| ||||||||| |||||||| || Sbjct: 41939 cttagcagacttatccaaggagcctgttaggaaatgcgaccaatctgcagattttgaaag 41998 Query: 601 tgagctaattgccttctgatgtccaacctccttgtctgactccttcagaagttttccagt 660 ||| |||||| ||||||||||| ||| |||||||||||||||||| || |||||| Sbjct: 41999 tgaagtaattgttttctgatgtccttgctctttgtctgactccttcagacattgtccagt 42058 Query: 661 ct 662 || Sbjct: 42059 ct 42060 Score = 83.8 bits (42), Expect = 7e-13 Identities = 66/74 (89%) Strand = Plus / Plus Query: 212 atctttatgttgaaatactcaggatcaaaatggtgtagcctgacatatccatcctcaccg 271 ||||| |||||||| || |||| |||||||||||| ||||| ||||||||||| ||||| Sbjct: 37186 atcttgatgttgaagtagtcagaatcaaaatggtgcagccttacatatccatcttcacca 37245 Query: 272 ccactcgaaaagct 285 |||||||||||||| Sbjct: 37246 ccactcgaaaagct 37259 Score = 75.8 bits (38), Expect = 2e-10 Identities = 80/94 (85%) Strand = Plus / Plus Query: 449 acatgatcaagagtaggagatatatcaacagcattaaccggtctttctgtgacatatgtc 508 ||||| |||||| |||||| || |||||||||||||| |||| || |||||||||||| Sbjct: 41744 acatggtcaagaagaggagaaatgtcaacagcattaacaggtcgctcagtgacatatgtc 41803 Query: 509 tttatcagggtcagtgttcttgcatcccacagct 542 || ||||| ||||| ||||||| |||||| |||| Sbjct: 41804 ttgatcagcgtcagagttcttgtatcccatagct 41837 Score = 75.8 bits (38), Expect = 2e-10 Identities = 71/82 (86%) Strand = Plus / Plus Query: 284 ctcctcccatcaggattaaatgctaatgcattgattggtccaaaatgtcctttaacacca 343 |||| |||||||||||||||||| | || || |||||||||||||| |||||||||||| Sbjct: 38437 ctccgcccatcaggattaaatgccagcgcgttaattggtccaaaatggcctttaacacca 38496 Query: 344 ccaatctcttcttctaaaatct 365 ||||| || |||| ||||||| Sbjct: 38497 ccaatttcctcttgcaaaatct 38518
>dbj|AP005693.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0061E21 Length = 155085 Score = 93.7 bits (47), Expect = 7e-16 Identities = 77/87 (88%) Strand = Plus / Plus Query: 364 cttgtggaaaaatttcgcctcgaatttacctgcacggcgatctgtcatggtaacattcat 423 |||||| ||||||||||| || ||||| |||||||| ||||||||||| || |||||||| Sbjct: 102172 cttgtgaaaaaatttcgcttcaaattttcctgcacgacgatctgtcatagtcacattcat 102231 Query: 424 agcatcctgacctcctccaataaccac 450 ||||| ||||| |||||||||||||| Sbjct: 102232 cgcatcttgaccacctccaataaccac 102258 Score = 91.7 bits (46), Expect = 3e-15 Identities = 103/122 (84%) Strand = Plus / Plus Query: 541 cttagcagatttatccaaggaacctgtgaggaaatgagaccaatctaaggattttgacag 600 ||||||||| ||||||||||| ||||| |||||||| ||||||||| |||||||| || Sbjct: 105477 cttagcagacttatccaaggagcctgttaggaaatgcgaccaatctgcagattttgaaag 105536 Query: 601 tgagctaattgccttctgatgtccaacctccttgtctgactccttcagaagttttccagt 660 ||| |||||| ||||||||||| ||| |||||||||||||||||| || |||||| Sbjct: 105537 tgaagtaattgttttctgatgtccttgctctttgtctgactccttcagacattgtccagt 105596 Query: 661 ct 662 || Sbjct: 105597 ct 105598 Score = 83.8 bits (42), Expect = 7e-13 Identities = 66/74 (89%) Strand = Plus / Plus Query: 212 atctttatgttgaaatactcaggatcaaaatggtgtagcctgacatatccatcctcaccg 271 ||||| |||||||| || |||| |||||||||||| ||||| ||||||||||| ||||| Sbjct: 100724 atcttgatgttgaagtagtcagaatcaaaatggtgcagccttacatatccatcttcacca 100783 Query: 272 ccactcgaaaagct 285 |||||||||||||| Sbjct: 100784 ccactcgaaaagct 100797 Score = 75.8 bits (38), Expect = 2e-10 Identities = 80/94 (85%) Strand = Plus / Plus Query: 449 acatgatcaagagtaggagatatatcaacagcattaaccggtctttctgtgacatatgtc 508 ||||| |||||| |||||| || |||||||||||||| |||| || |||||||||||| Sbjct: 105282 acatggtcaagaagaggagaaatgtcaacagcattaacaggtcgctcagtgacatatgtc 105341 Query: 509 tttatcagggtcagtgttcttgcatcccacagct 542 || ||||| ||||| ||||||| |||||| |||| Sbjct: 105342 ttgatcagcgtcagagttcttgtatcccatagct 105375 Score = 75.8 bits (38), Expect = 2e-10 Identities = 71/82 (86%) Strand = Plus / Plus Query: 284 ctcctcccatcaggattaaatgctaatgcattgattggtccaaaatgtcctttaacacca 343 |||| |||||||||||||||||| | || || |||||||||||||| |||||||||||| Sbjct: 101975 ctccgcccatcaggattaaatgccagcgcgttaattggtccaaaatggcctttaacacca 102034 Query: 344 ccaatctcttcttctaaaatct 365 ||||| || |||| ||||||| Sbjct: 102035 ccaatttcctcttgcaaaatct 102056
>gb|AF335551.1|AF335551 Phaseolus vulgaris TGF-beta receptor-interacting protein 1 mRNA, complete cds Length = 1143 Score = 85.7 bits (43), Expect = 2e-13 Identities = 88/103 (85%) Strand = Plus / Minus Query: 254 acatatccatcctcaccgccactcgaaaagctcctcccatcaggattaaatgctaatgca 313 ||||| ||||| ||||| ||||| ||||| || | |||||||| ||||| || |||||| Sbjct: 950 acataaccatcttcacctccacttgaaaaactttttccatcagggttaaaggccaatgca 891 Query: 314 ttgattggtccaaaatgtcctttaacaccaccaatctcttctt 356 || |||||||||||||||||||| ||||| ||||| ||||||| Sbjct: 890 ttaattggtccaaaatgtcctttcacacccccaatttcttctt 848 Score = 52.0 bits (26), Expect = 0.002 Identities = 98/122 (80%) Strand = Plus / Minus Query: 428 tcctgacctcctccaataaccacatgatcaagagtaggagatatatcaacagcattaacc 487 |||||||| ||||||| ||||||||||||||| || || || |||| ||||| || Sbjct: 776 tcctgaccacctccaagtaccacatgatcaagaagtggtgacattgcaactgcattgact 717 Query: 488 ggtctttctgtgacatatgtctttatcagggtcagtgttcttgcatcccacagcttagca 547 || | |||||||||||| ||||| || || |||| |||||| | |||||| ||| ||||| Sbjct: 716 ggccgttctgtgacataggtcttgataagagtcaatgttctagtatcccaaagcctagca 657 Query: 548 ga 549 || Sbjct: 656 ga 655 Score = 42.1 bits (21), Expect = 2.3 Identities = 33/37 (89%) Strand = Plus / Minus Query: 629 tccttgtctgactccttcagaagttttccagtctcag 665 ||||||||||||||||| | | |||||||||||||| Sbjct: 575 tccttgtctgactccttaatcaattttccagtctcag 539
>gb|BT016930.1| Zea mays clone E04912703E02.c mRNA sequence Length = 357 Score = 83.8 bits (42), Expect = 7e-13 Identities = 84/98 (85%) Strand = Plus / Plus Query: 209 tacatctttatgttgaaatactcaggatcaaaatggtgtagcctgacatatccatcctca 268 |||||||| ||| |||| || || | ||||||||| || ||||| ||||||||||| ||| Sbjct: 256 tacatcttgatgctgaagtagtcggaatcaaaatgatgcagccttacatatccatcttca 315 Query: 269 ccgccactcgaaaagctcctcccatcaggattaaatgc 306 || ||||| ||||| |||| |||||||||||||||||| Sbjct: 316 ccaccacttgaaaaactccgcccatcaggattaaatgc 353
>emb|BX822030.1|CNS0A9BD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL93ZC12 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1117 Score = 81.8 bits (41), Expect = 3e-12 Identities = 95/113 (84%) Strand = Plus / Minus Query: 236 tcaaaatggtgtagcctgacatatccatcctcaccgccactcgaaaagctcctcccatca 295 |||||||| || ||||| || || || || ||||| ||||| || || ||| |||||||| Sbjct: 990 tcaaaatgatgcagcctcacgtaaccgtcttcacctccactagagaaactcttcccatca 931 Query: 296 ggattaaatgctaatgcattgattggtccaaaatgtcctttaacaccaccaat 348 ||||||||||| || ||||| || ||||||||||| ||||| ||||||||||| Sbjct: 930 ggattaaatgccaaagcatttataggtccaaaatgacctttcacaccaccaat 878
>gb|AC132489.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0537C11, complete sequence Length = 146677 Score = 79.8 bits (40), Expect = 1e-11 Identities = 70/80 (87%) Strand = Plus / Minus Query: 463 aggagatatatcaacagcattaaccggtctttctgtgacatatgtctttatcagggtcag 522 |||||| || |||||||||||||| |||| || |||||||||||||| ||||||||||| Sbjct: 122496 aggagaaatgtcaacagcattaacaggtcgctcggtgacatatgtcttgatcagggtcag 122437 Query: 523 tgttcttgcatcccacagct 542 ||||||| |||||| |||| Sbjct: 122436 agttcttgtatcccatagct 122417 Score = 75.8 bits (38), Expect = 2e-10 Identities = 65/74 (87%) Strand = Plus / Minus Query: 212 atctttatgttgaaatactcaggatcaaaatggtgtagcctgacatatccatcctcaccg 271 ||||| |||||||| || |||| |||||||||||| ||||| ||||||||||| ||||| Sbjct: 124859 atcttgatgttgaagtagtcagaatcaaaatggtgcagccttacatatccatcttcacca 124800 Query: 272 ccactcgaaaagct 285 |||||||| ||||| Sbjct: 124799 ccactcgagaagct 124786 Score = 71.9 bits (36), Expect = 3e-09 Identities = 66/76 (86%) Strand = Plus / Minus Query: 290 ccatcaggattaaatgctaatgcattgattggtccaaaatgtcctttaacaccaccaatc 349 ||||||||||||||||| | ||| || |||||||||||||| ||||| ||||||||||| Sbjct: 123428 ccatcaggattaaatgccagtgcgttaattggtccaaaatggccttttacaccaccaatt 123369 Query: 350 tcttcttctaaaatct 365 || |||| ||||||| Sbjct: 123368 tcctcttgcaaaatct 123353 Score = 67.9 bits (34), Expect = 4e-08 Identities = 100/122 (81%) Strand = Plus / Minus Query: 541 cttagcagatttatccaaggaacctgtgaggaaatgagaccaatctaaggattttgacag 600 ||||||||| ||||||||||| ||||| |||||||| ||||||||| |||||||| || Sbjct: 122314 cttagcagacttatccaaggagcctgttaggaaatgtgaccaatctgcagattttgaaag 122255 Query: 601 tgagctaattgccttctgatgtccaacctccttgtctgactccttcagaagttttccagt 660 ||| |||||| ||||| ||||| || ||||||||||| |||||| | ||||||| Sbjct: 122254 tgaagtaattgttttctggtgtccttgttctttgtctgactcattcagacatgttccagt 122195 Query: 661 ct 662 || Sbjct: 122194 ct 122193 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Minus Query: 364 cttgtggaaaaatttcgcctcgaatttacctgcacggcgatctgtcatggtaacattcat 423 |||||| || |||||||| || ||||| || || || ||||||||||| || |||||||| Sbjct: 123237 cttgtgaaagaatttcgcttcaaattttcccgctcgacgatctgtcatagtcacattcat 123178 Query: 424 agcatcctgacctcctccaataaccac 450 ||||| ||||| ||||| |||||||| Sbjct: 123177 cgcatcttgaccacctccgataaccac 123151
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 79.8 bits (40), Expect = 1e-11 Identities = 70/80 (87%) Strand = Plus / Minus Query: 463 aggagatatatcaacagcattaaccggtctttctgtgacatatgtctttatcagggtcag 522 |||||| || |||||||||||||| |||| || |||||||||||||| ||||||||||| Sbjct: 9350551 aggagaaatgtcaacagcattaacaggtcgctcggtgacatatgtcttgatcagggtcag 9350492 Query: 523 tgttcttgcatcccacagct 542 ||||||| |||||| |||| Sbjct: 9350491 agttcttgtatcccatagct 9350472 Score = 75.8 bits (38), Expect = 2e-10 Identities = 65/74 (87%) Strand = Plus / Minus Query: 212 atctttatgttgaaatactcaggatcaaaatggtgtagcctgacatatccatcctcaccg 271 ||||| |||||||| || |||| |||||||||||| ||||| ||||||||||| ||||| Sbjct: 9352914 atcttgatgttgaagtagtcagaatcaaaatggtgcagccttacatatccatcttcacca 9352855 Query: 272 ccactcgaaaagct 285 |||||||| ||||| Sbjct: 9352854 ccactcgagaagct 9352841 Score = 71.9 bits (36), Expect = 3e-09 Identities = 66/76 (86%) Strand = Plus / Minus Query: 290 ccatcaggattaaatgctaatgcattgattggtccaaaatgtcctttaacaccaccaatc 349 ||||||||||||||||| | ||| || |||||||||||||| ||||| ||||||||||| Sbjct: 9351483 ccatcaggattaaatgccagtgcgttaattggtccaaaatggccttttacaccaccaatt 9351424 Query: 350 tcttcttctaaaatct 365 || |||| ||||||| Sbjct: 9351423 tcctcttgcaaaatct 9351408 Score = 67.9 bits (34), Expect = 4e-08 Identities = 100/122 (81%) Strand = Plus / Minus Query: 541 cttagcagatttatccaaggaacctgtgaggaaatgagaccaatctaaggattttgacag 600 ||||||||| ||||||||||| ||||| |||||||| ||||||||| |||||||| || Sbjct: 9350369 cttagcagacttatccaaggagcctgttaggaaatgtgaccaatctgcagattttgaaag 9350310 Query: 601 tgagctaattgccttctgatgtccaacctccttgtctgactccttcagaagttttccagt 660 ||| |||||| ||||| ||||| || ||||||||||| |||||| | ||||||| Sbjct: 9350309 tgaagtaattgttttctggtgtccttgttctttgtctgactcattcagacatgttccagt 9350250 Query: 661 ct 662 || Sbjct: 9350249 ct 9350248 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Minus Query: 364 cttgtggaaaaatttcgcctcgaatttacctgcacggcgatctgtcatggtaacattcat 423 |||||| || |||||||| || ||||| || || || ||||||||||| || |||||||| Sbjct: 9351292 cttgtgaaagaatttcgcttcaaattttcccgctcgacgatctgtcatagtcacattcat 9351233 Query: 424 agcatcctgacctcctccaataaccac 450 ||||| ||||| ||||| |||||||| Sbjct: 9351232 cgcatcttgaccacctccgataaccac 9351206
>ref|NM_201968.1| Arabidopsis thaliana TRIP-1 (TGF-BETA RECEPTOR INTERACTING PROTEIN 1); nucleotide binding AT2G46280 (TRIP-1) transcript variant AT2G46280.3 mRNA, complete cds Length = 1391 Score = 73.8 bits (37), Expect = 7e-10 Identities = 94/113 (83%) Strand = Plus / Minus Query: 236 tcaaaatggtgtagcctgacatatccatcctcaccgccactcgaaaagctcctcccatca 295 |||||||| || ||||| || || || || ||||| ||||| || || ||| |||||||| Sbjct: 1164 tcaaaatgatgcagcctcacgtaaccgtcttcacctccactagagaaactcttcccatca 1105 Query: 296 ggattaaatgctaatgcattgattggtccaaaatgtcctttaacaccaccaat 348 ||||| ||||| || ||||| || ||||||||||| ||||| ||||||||||| Sbjct: 1104 ggattgaatgccaaagcatttataggtccaaaatgacctttcacaccaccaat 1052
>ref|NM_130191.3| Arabidopsis thaliana TRIP-1 (TGF-BETA RECEPTOR INTERACTING PROTEIN 1); nucleotide binding AT2G46280 (TRIP-1) transcript variant AT2G46280.1 mRNA, complete cds Length = 1311 Score = 73.8 bits (37), Expect = 7e-10 Identities = 94/113 (83%) Strand = Plus / Minus Query: 236 tcaaaatggtgtagcctgacatatccatcctcaccgccactcgaaaagctcctcccatca 295 |||||||| || ||||| || || || || ||||| ||||| || || ||| |||||||| Sbjct: 1071 tcaaaatgatgcagcctcacgtaaccgtcttcacctccactagagaaactcttcccatca 1012 Query: 296 ggattaaatgctaatgcattgattggtccaaaatgtcctttaacaccaccaat 348 ||||| ||||| || ||||| || ||||||||||| ||||| ||||||||||| Sbjct: 1011 ggattgaatgccaaagcatttataggtccaaaatgacctttcacaccaccaat 959
>ref|NM_180119.1| Arabidopsis thaliana TRIP-1 (TGF-BETA RECEPTOR INTERACTING PROTEIN 1); nucleotide binding AT2G46280 (TRIP-1) transcript variant AT2G46280.2 mRNA, complete cds Length = 1255 Score = 73.8 bits (37), Expect = 7e-10 Identities = 94/113 (83%) Strand = Plus / Minus Query: 236 tcaaaatggtgtagcctgacatatccatcctcaccgccactcgaaaagctcctcccatca 295 |||||||| || ||||| || || || || ||||| ||||| || || ||| |||||||| Sbjct: 1015 tcaaaatgatgcagcctcacgtaaccgtcttcacctccactagagaaactcttcccatca 956 Query: 296 ggattaaatgctaatgcattgattggtccaaaatgtcctttaacaccaccaat 348 ||||| ||||| || ||||| || ||||||||||| ||||| ||||||||||| Sbjct: 955 ggattgaatgccaaagcatttataggtccaaaatgacctttcacaccaccaat 903
>emb|BX820114.1|CNS0AAC4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS75ZC02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1142 Score = 73.8 bits (37), Expect = 7e-10 Identities = 94/113 (83%) Strand = Plus / Minus Query: 236 tcaaaatggtgtagcctgacatatccatcctcaccgccactcgaaaagctcctcccatca 295 |||||||| || ||||| || || || || ||||| ||||| || || ||| |||||||| Sbjct: 989 tcaaaatgatgcagcctcacgtaaccgtcttcacctccactagagaaactcttcccatca 930 Query: 296 ggattaaatgctaatgcattgattggtccaaaatgtcctttaacaccaccaat 348 ||||| ||||| || ||||| || ||||||||||| ||||| ||||||||||| Sbjct: 929 ggattgaatgccaaagcatttataggtccaaaatgacctttcacaccaccaat 877
>emb|BX820112.1|CNS0AAC3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS74ZH09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1239 Score = 73.8 bits (37), Expect = 7e-10 Identities = 94/113 (83%) Strand = Plus / Minus Query: 236 tcaaaatggtgtagcctgacatatccatcctcaccgccactcgaaaagctcctcccatca 295 |||||||| || ||||| || || || || ||||| ||||| || || ||| |||||||| Sbjct: 990 tcaaaatgatgcagcctcacgtaaccgtcttcacctccactagagaaactcttcccatca 931 Query: 296 ggattaaatgctaatgcattgattggtccaaaatgtcctttaacaccaccaat 348 ||||| ||||| || ||||| || ||||||||||| ||||| ||||||||||| Sbjct: 930 ggattgaatgccaaagcatttataggtccaaaatgacctttcacaccaccaat 878
>emb|BX819310.1|CNS0AADQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB67ZC11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1098 Score = 73.8 bits (37), Expect = 7e-10 Identities = 94/113 (83%) Strand = Plus / Minus Query: 236 tcaaaatggtgtagcctgacatatccatcctcaccgccactcgaaaagctcctcccatca 295 |||||||| || ||||| || || || || ||||| ||||| || || ||| |||||||| Sbjct: 947 tcaaaatgatgcagcctcacgtaaccgtcttcacctccactagagaaactcttcccatca 888 Query: 296 ggattaaatgctaatgcattgattggtccaaaatgtcctttaacaccaccaat 348 ||||| ||||| || ||||| || ||||||||||| ||||| ||||||||||| Sbjct: 887 ggattgaatgccaaagcatttataggtccaaaatgacctttcacaccaccaat 835
>emb|BX820839.1|CNS0A9OL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH74ZE08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1227 Score = 73.8 bits (37), Expect = 7e-10 Identities = 94/113 (83%) Strand = Plus / Minus Query: 236 tcaaaatggtgtagcctgacatatccatcctcaccgccactcgaaaagctcctcccatca 295 |||||||| || ||||| || || || || ||||| ||||| || || ||| |||||||| Sbjct: 990 tcaaaatgatgcagcctcacgtaaccgtcttcacctccactagagaaactcttcccatca 931 Query: 296 ggattaaatgctaatgcattgattggtccaaaatgtcctttaacaccaccaat 348 ||||| ||||| || ||||| || ||||||||||| ||||| ||||||||||| Sbjct: 930 ggattgaatgccaaagcatttataggtccaaaatgacctttcacaccaccaat 878
>emb|BX820707.1|CNS0A9OS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH61ZB03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1142 Score = 73.8 bits (37), Expect = 7e-10 Identities = 94/113 (83%) Strand = Plus / Minus Query: 236 tcaaaatggtgtagcctgacatatccatcctcaccgccactcgaaaagctcctcccatca 295 |||||||| || ||||| || || || || ||||| ||||| || || ||| |||||||| Sbjct: 989 tcaaaatgatgcagcctcacgtaaccgtcttcacctccactagagaaactcttcccatca 930 Query: 296 ggattaaatgctaatgcattgattggtccaaaatgtcctttaacaccaccaat 348 ||||| ||||| || ||||| || ||||||||||| ||||| ||||||||||| Sbjct: 929 ggattgaatgccaaagcatttataggtccaaaatgacctttcacaccaccaat 877
>emb|BX820633.1|CNS0A9MA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH54ZE08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 676 Score = 73.8 bits (37), Expect = 7e-10 Identities = 94/113 (83%) Strand = Plus / Minus Query: 236 tcaaaatggtgtagcctgacatatccatcctcaccgccactcgaaaagctcctcccatca 295 |||||||| || ||||| || || || || ||||| ||||| || || ||| |||||||| Sbjct: 500 tcaaaatgatgcagcctcacgtaaccgtcttcacctccactagagaaactcttcccatca 441 Query: 296 ggattaaatgctaatgcattgattggtccaaaatgtcctttaacaccaccaat 348 ||||| ||||| || ||||| || ||||||||||| ||||| ||||||||||| Sbjct: 440 ggattgaatgccaaagcatttataggtccaaaatgacctttcacaccaccaat 388
>emb|BX820483.1|CNS0A9I1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH39ZC08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1117 Score = 73.8 bits (37), Expect = 7e-10 Identities = 94/113 (83%) Strand = Plus / Minus Query: 236 tcaaaatggtgtagcctgacatatccatcctcaccgccactcgaaaagctcctcccatca 295 |||||||| || ||||| || || || || ||||| ||||| || || ||| |||||||| Sbjct: 989 tcaaaatgatgcagcctcacgtaaccgtcttcacctccactagagaaactcttcccatca 930 Query: 296 ggattaaatgctaatgcattgattggtccaaaatgtcctttaacaccaccaat 348 ||||| ||||| || ||||| || ||||||||||| ||||| ||||||||||| Sbjct: 929 ggattgaatgccaaagcatttataggtccaaaatgacctttcacaccaccaat 877
>emb|BX820257.1|CNS0A9MY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH13ZE03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1203 Score = 73.8 bits (37), Expect = 7e-10 Identities = 94/113 (83%) Strand = Plus / Minus Query: 236 tcaaaatggtgtagcctgacatatccatcctcaccgccactcgaaaagctcctcccatca 295 |||||||| || ||||| || || || || ||||| ||||| || || ||| |||||||| Sbjct: 1068 tcaaaatgatgcagcctcacgtaaccgtcttcacctccactagagaaactcttcccatca 1009 Query: 296 ggattaaatgctaatgcattgattggtccaaaatgtcctttaacaccaccaat 348 ||||| ||||| || ||||| || ||||||||||| ||||| ||||||||||| Sbjct: 1008 ggattgaatgccaaagcatttataggtccaaaatgacctttcacaccaccaat 956
>emb|BX820796.1|CNS0A830 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH6ZE03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1370 Score = 73.8 bits (37), Expect = 7e-10 Identities = 94/113 (83%) Strand = Plus / Minus Query: 236 tcaaaatggtgtagcctgacatatccatcctcaccgccactcgaaaagctcctcccatca 295 |||||||| || ||||| || || || || ||||| ||||| || || ||| |||||||| Sbjct: 1142 tcaaaatgatgcagcctcacgtaaccgtcttcacctccactagagaaactcttcccatca 1083 Query: 296 ggattaaatgctaatgcattgattggtccaaaatgtcctttaacaccaccaat 348 ||||| ||||| || ||||| || ||||||||||| ||||| ||||||||||| Sbjct: 1082 ggattgaatgccaaagcatttataggtccaaaatgacctttcacaccaccaat 1030
>emb|BX819639.1|CNS0A80H Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS10ZA11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1228 Score = 73.8 bits (37), Expect = 7e-10 Identities = 94/113 (83%) Strand = Plus / Minus Query: 236 tcaaaatggtgtagcctgacatatccatcctcaccgccactcgaaaagctcctcccatca 295 |||||||| || ||||| || || || || ||||| ||||| || || ||| |||||||| Sbjct: 1069 tcaaaatgatgcagcctcacgtaaccgtcttcacctccactagagaaactcttcccatca 1010 Query: 296 ggattaaatgctaatgcattgattggtccaaaatgtcctttaacaccaccaat 348 ||||| ||||| || ||||| || ||||||||||| ||||| ||||||||||| Sbjct: 1009 ggattgaatgccaaagcatttataggtccaaaatgacctttcacaccaccaat 957
>gb|AF285835.1|AF285835 Arabidopsis thaliana eukaryotic initiation factor 3I1 subunit (TIF3I1) mRNA, complete cds Length = 1200 Score = 73.8 bits (37), Expect = 7e-10 Identities = 94/113 (83%) Strand = Plus / Minus Query: 236 tcaaaatggtgtagcctgacatatccatcctcaccgccactcgaaaagctcctcccatca 295 |||||||| || ||||| || || || || ||||| ||||| || || ||| |||||||| Sbjct: 1013 tcaaaatgatgcagcctcacgtaaccgtcttcacctccactagagaaactcttcccatca 954 Query: 296 ggattaaatgctaatgcattgattggtccaaaatgtcctttaacaccaccaat 348 ||||| ||||| || ||||| || ||||||||||| ||||| ||||||||||| Sbjct: 953 ggattgaatgccaaagcatttataggtccaaaatgacctttcacaccaccaat 901
>emb|BX842024.1|CNS09YA9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS63ZG03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1086 Score = 71.9 bits (36), Expect = 3e-09 Identities = 72/84 (85%) Strand = Plus / Minus Query: 265 ctcaccgccactcgaaaagctcctcccatcaggattaaatgctaatgcattgattggtcc 324 |||||| ||||| || || ||| ||||||||||||| ||||| || ||||| || ||||| Sbjct: 961 ctcacctccactagagaaactcttcccatcaggattgaatgccaaagcatttataggtcc 902 Query: 325 aaaatgtcctttaacaccaccaat 348 |||||| ||||| ||||||||||| Sbjct: 901 aaaatgacctttcacaccaccaat 878
>gb|U36765.1|ATU36765 Arabidopsis thaliana TGF-beta receptor interacting protein 1 homolog mRNA, complete cds Length = 1138 Score = 69.9 bits (35), Expect = 1e-08 Identities = 71/83 (85%) Strand = Plus / Minus Query: 266 tcaccgccactcgaaaagctcctcccatcaggattaaatgctaatgcattgattggtcca 325 ||||| ||||| || || ||| ||||||||||||| ||||| || ||||| || |||||| Sbjct: 934 tcacctccactagagaaactcttcccatcaggattgaatgccaaagcatttataggtcca 875 Query: 326 aaatgtcctttaacaccaccaat 348 ||||| ||||| ||||||||||| Sbjct: 874 aaatgacctttcacaccaccaat 852
>gb|AC005397.3| Arabidopsis thaliana chromosome 2 clone T3F17 map CIC02E07, complete sequence Length = 110149 Score = 65.9 bits (33), Expect = 2e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 288 tcccatcaggattaaatgctaatgcattgattggtccaaaatgtcctttaacaccaccaa 347 ||||||||||||| ||||| || ||||| || ||||||||||| ||||| |||||||||| Sbjct: 19724 tcccatcaggattgaatgccaaagcatttataggtccaaaatgacctttcacaccaccaa 19665 Query: 348 t 348 | Sbjct: 19664 t 19664 Score = 50.1 bits (25), Expect = 0.009 Identities = 52/61 (85%) Strand = Plus / Minus Query: 288 tcccatcaggattaaatgctaatgcattgattggtccaaaatgtcctttaacaccaccaa 347 ||||||||||| | ||||| || ||||| || ||||||||||| ||||| || ||||||| Sbjct: 17476 tcccatcaggactgaatgccaaagcattaataggtccaaaatgacctttcacgccaccaa 17417 Query: 348 t 348 | Sbjct: 17416 t 17416
>gb|AY064633.1| Arabidopsis thaliana eukaryotic translation initiation factor 3 delta subunit (At2g46280; T3F17.7) mRNA, complete cds Length = 1011 Score = 65.9 bits (33), Expect = 2e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 288 tcccatcaggattaaatgctaatgcattgattggtccaaaatgtcctttaacaccaccaa 347 ||||||||||||| ||||| || ||||| || ||||||||||| ||||| |||||||||| Sbjct: 907 tcccatcaggattgaatgccaaagcatttataggtccaaaatgacctttcacaccaccaa 848 Query: 348 t 348 | Sbjct: 847 t 847
>gb|AF370485.1|AF370485 Arabidopsis thaliana eukaryotic translation initiation factor 3 delta subunit (At2g46280; T3F17.7) mRNA, complete cds Length = 1205 Score = 65.9 bits (33), Expect = 2e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 288 tcccatcaggattaaatgctaatgcattgattggtccaaaatgtcctttaacaccaccaa 347 ||||||||||||| ||||| || ||||| || ||||||||||| ||||| |||||||||| Sbjct: 963 tcccatcaggattgaatgccaaagcatttataggtccaaaatgacctttcacaccaccaa 904 Query: 348 t 348 | Sbjct: 903 t 903
>gb|AC121328.3| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0030E22, complete sequence Length = 135468 Score = 63.9 bits (32), Expect = 6e-07 Identities = 89/108 (82%) Strand = Plus / Minus Query: 541 cttagcagatttatccaaggaacctgtgaggaaatgagaccaatctaaggattttgacag 600 ||||||||| ||||||||||| ||||| ||||| | || |||||| | ||||| || || Sbjct: 102918 cttagcagacttatccaaggagcctgtttggaaaggcgatcaatctgaagatttggaaag 102859 Query: 601 tgagctaattgccttctgatgtccaacctccttgtctgactccttcag 648 ||| |||||| ||||||||||| |||||||||||||||||||| Sbjct: 102858 tgaagtaattgttttctgatgtccttgttccttgtctgactccttcag 102811 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 406 tgtcatggtaacattcatagcatcctgacctcctccaataaccac 450 |||||| || |||||||||||||| ||||| |||||||||||||| Sbjct: 103793 tgtcatagtcacattcatagcatcttgaccacctccaataaccac 103749 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 290 ccatcaggattaaatgctaatgcattgattggtccaaaatgtcctttaacacca 343 ||||||||||||||||| | | || |||||||||||||| |||||||||||| Sbjct: 104024 ccatcaggattaaatgccagcacgttaattggtccaaaatggcctttaacacca 103971
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 63.9 bits (32), Expect = 6e-07 Identities = 89/108 (82%) Strand = Plus / Minus Query: 541 cttagcagatttatccaaggaacctgtgaggaaatgagaccaatctaaggattttgacag 600 ||||||||| ||||||||||| ||||| ||||| | || |||||| | ||||| || || Sbjct: 22545773 cttagcagacttatccaaggagcctgtttggaaaggcgatcaatctgaagatttggaaag 22545714 Query: 601 tgagctaattgccttctgatgtccaacctccttgtctgactccttcag 648 ||| |||||| ||||||||||| |||||||||||||||||||| Sbjct: 22545713 tgaagtaattgttttctgatgtccttgttccttgtctgactccttcag 22545666 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 406 tgtcatggtaacattcatagcatcctgacctcctccaataaccac 450 |||||| || |||||||||||||| ||||| |||||||||||||| Sbjct: 22546648 tgtcatagtcacattcatagcatcttgaccacctccaataaccac 22546604 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 290 ccatcaggattaaatgctaatgcattgattggtccaaaatgtcctttaacacca 343 ||||||||||||||||| | | || |||||||||||||| |||||||||||| Sbjct: 22546879 ccatcaggattaaatgccagcacgttaattggtccaaaatggcctttaacacca 22546826
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 63.9 bits (32), Expect = 6e-07 Identities = 89/108 (82%) Strand = Plus / Minus Query: 541 cttagcagatttatccaaggaacctgtgaggaaatgagaccaatctaaggattttgacag 600 ||||||||| ||||||||||| ||||| ||||| | || |||||| | ||||| || || Sbjct: 22855684 cttagcagacttatccaaggagcctgtttggaaaggcgatcaatctgaagatttggaaag 22855625 Query: 601 tgagctaattgccttctgatgtccaacctccttgtctgactccttcag 648 ||| |||||| ||||||||||| |||||||||||||||||||| Sbjct: 22855624 tgaagtaattgttttctgatgtccttgttccttgtctgactccttcag 22855577 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 406 tgtcatggtaacattcatagcatcctgacctcctccaataaccac 450 |||||| || |||||||||||||| ||||| |||||||||||||| Sbjct: 22856559 tgtcatagtcacattcatagcatcttgaccacctccaataaccac 22856515 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 290 ccatcaggattaaatgctaatgcattgattggtccaaaatgtcctttaacacca 343 ||||||||||||||||| | | || |||||||||||||| |||||||||||| Sbjct: 22856790 ccatcaggattaaatgccagcacgttaattggtccaaaatggcctttaacacca 22856737
>ref|NM_130192.2| Arabidopsis thaliana nucleotide binding AT2G46290 mRNA, complete cds Length = 1283 Score = 54.0 bits (27), Expect = 6e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 266 tcaccgccactcgaaaagctcctcccatcaggattaaatgctaatgcattgattggtcca 325 ||||| ||||| || || ||| ||||||||||| | ||||| || ||||| || |||||| Sbjct: 1091 tcacctccactagagaaactcttcccatcaggactgaatgccaaagcattaataggtcca 1032 Query: 326 aaatgtcctttaacaccaccaat 348 ||||| ||||| || |||||||| Sbjct: 1031 aaatgacctttcacgccaccaat 1009
>ref|XM_392780.2| PREDICTED: Apis mellifera similar to CG8882-PA (LOC409258), mRNA Length = 1104 Score = 54.0 bits (27), Expect = 6e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 416 acattcatagcatcctgacctcctccaataaccacatgatcaagagtaggagatatatca 475 |||| ||||||||| ||||||||||||| ||| |||||||||| | | ||||| || | Sbjct: 864 acatccatagcatcttgacctcctccaagaacgacatgatcaaaaattggagaaattgta 805 Query: 476 acagcattaaccggtctttctgt 498 ||| |||||| ||||||||||| Sbjct: 804 gcagaattaacaggtctttctgt 782
>dbj|AK118944.1| Arabidopsis thaliana At2g46290 mRNA for putative eukaryotic translation initiation factor 3 delta subunit, complete cds, clone: RAFL21-28-F22 Length = 1283 Score = 54.0 bits (27), Expect = 6e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 266 tcaccgccactcgaaaagctcctcccatcaggattaaatgctaatgcattgattggtcca 325 ||||| ||||| || || ||| ||||||||||| | ||||| || ||||| || |||||| Sbjct: 1091 tcacctccactagagaaactcttcccatcaggactgaatgccaaagcattaataggtcca 1032 Query: 326 aaatgtcctttaacaccaccaat 348 ||||| ||||| || |||||||| Sbjct: 1031 aaatgacctttcacgccaccaat 1009
>gb|AC171734.1| Lycopersicon esculentum chromosome 11 clone C11HBa0064J13, complete sequence Length = 118649 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 288 tcccatcaggattaaatgctaatgcattgattggtccaaaatgtcctttaacacc 342 ||||||||||||| || || || ||||| |||||||||||||| ||||| ||||| Sbjct: 110751 tcccatcaggattgaaagccaaagcatttattggtccaaaatgccctttgacacc 110697
>gb|AC133862.6| Medicago truncatula clone mth2-30d7, complete sequence Length = 130054 Score = 46.1 bits (23), Expect = 0.15 Identities = 41/47 (87%) Strand = Plus / Minus Query: 310 tgcattgattggtccaaaatgtcctttaacaccaccaatctcttctt 356 |||||| || ||||||||||| ||||| ||||| ||||| ||||||| Sbjct: 62005 tgcattaatcggtccaaaatgccctttcacacccccaatttcttctt 61959 Score = 44.1 bits (22), Expect = 0.58 Identities = 31/34 (91%) Strand = Plus / Minus Query: 629 tccttgtctgactccttcagaagttttccagtct 662 ||||||||||||||||| || |||||||| |||| Sbjct: 60617 tccttgtctgactcctttagtagttttccggtct 60584
>gb|AC124957.18| Medicago truncatula clone mth2-15k14, complete sequence Length = 140624 Score = 46.1 bits (23), Expect = 0.15 Identities = 41/47 (87%) Strand = Plus / Plus Query: 310 tgcattgattggtccaaaatgtcctttaacaccaccaatctcttctt 356 |||||| || ||||||||||| ||||| ||||| ||||| ||||||| Sbjct: 83497 tgcattaatcggtccaaaatgccctttcacacccccaatttcttctt 83543 Score = 44.1 bits (22), Expect = 0.58 Identities = 31/34 (91%) Strand = Plus / Plus Query: 629 tccttgtctgactccttcagaagttttccagtct 662 ||||||||||||||||| || |||||||| |||| Sbjct: 84886 tccttgtctgactcctttagtagttttccggtct 84919
>gb|AY378168.1| Cichorium intybus TGF-beta-receptor-interacting protein-like mRNA, partial sequence Length = 588 Score = 44.1 bits (22), Expect = 0.58 Identities = 67/81 (82%), Gaps = 2/81 (2%) Strand = Plus / Minus Query: 288 tcccatcaggattaaatgctaatgcattgattggtccaaaatgtcctttaacaccaccaa 347 |||||||||| || || || || ||||| ||||| |||||||| |||||| | | |||| Sbjct: 500 tcccatcagggttgaaagccaaagcatttattggaccaaaatgccctttagc--ctccaa 443 Query: 348 tctcttcttctaaaatcttgt 368 ||||||||| ||||| ||||| Sbjct: 442 tctcttcttgtaaaaccttgt 422
>gb|AC146086.2| Pan troglodytes BAC clone RP43-15D2 from 7, complete sequence Length = 135353 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 435 ctcctccaataaccacatgatc 456 |||||||||||||||||||||| Sbjct: 15121 ctcctccaataaccacatgatc 15100
>gb|AC092485.6| Homo sapiens BAC clone RP11-272P13 from 7, complete sequence Length = 121142 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 435 ctcctccaataaccacatgatc 456 |||||||||||||||||||||| Sbjct: 70289 ctcctccaataaccacatgatc 70268
>emb|AL671884.3| Human DNA sequence from clone RP13-44L19 on chromosome 6 Contains the gene for mandaselin (FLJ12838) and a CpG island, complete sequence Length = 105273 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 299 ttaaatgctaatgcattgattg 320 |||||||||||||||||||||| Sbjct: 61721 ttaaatgctaatgcattgattg 61700
>dbj|BA000001.2| Pyrococcus horikoshii OT3 DNA, complete genome Length = 1738505 Score = 44.1 bits (22), Expect = 0.58 Identities = 24/25 (96%) Strand = Plus / Minus Query: 6 gaaaaccagngtggcagagaaagca 30 ||||||||| ||||||||||||||| Sbjct: 369794 gaaaaccagtgtggcagagaaagca 369770
>emb|CR450728.8| Zebrafish DNA sequence from clone DKEY-204K18 in linkage group 8, complete sequence Length = 193025 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 252 tgacatatccatcctcaccgc 272 ||||||||||||||||||||| Sbjct: 175786 tgacatatccatcctcaccgc 175806
>gb|AY338808.1| Arborimus longicaudus isolate RTVB_I_1 cytochrome b gene, partial cds; mitochondrial Length = 664 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 289 cccatcaggattaaatgctaatgca 313 |||||||||||||||| |||||||| Sbjct: 312 cccatcaggattaaattctaatgca 336
>gb|AY338791.1| Arborimus longicaudus isolate H_RTVT13 cytochrome b gene, partial cds; mitochondrial Length = 664 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 289 cccatcaggattaaatgctaatgca 313 |||||||||||||||| |||||||| Sbjct: 312 cccatcaggattaaattctaatgca 336
>gb|AY338789.1| Arborimus longicaudus isolate H_RTVT12 cytochrome b gene, partial cds; mitochondrial Length = 664 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 289 cccatcaggattaaatgctaatgca 313 |||||||||||||||| |||||||| Sbjct: 312 cccatcaggattaaattctaatgca 336
>gb|AE017125.1| Helicobacter hepaticus ATCC 51449, complete genome Length = 1799146 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 324 caaaatgtcctttaacaccac 344 ||||||||||||||||||||| Sbjct: 135296 caaaatgtcctttaacaccac 135316
>gb|BC029094.1| Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 52, mRNA (cDNA clone MGC:28028 IMAGE:3662249), complete cds Length = 2215 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 646 cagaagttttccagtctcag 665 |||||||||||||||||||| Sbjct: 1206 cagaagttttccagtctcag 1187
>ref|NM_030096.1| Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 (Ddx52), mRNA Length = 2215 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 646 cagaagttttccagtctcag 665 |||||||||||||||||||| Sbjct: 1206 cagaagttttccagtctcag 1187
>gb|BC067379.1| Danio rerio cDNA clone IMAGE:6524442 Length = 1870 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 570 ggaaatgagaccaatctaag 589 |||||||||||||||||||| Sbjct: 1224 ggaaatgagaccaatctaag 1205
>gb|AC113198.15| Mus musculus chromosome 14, clone RP23-248E15, complete sequence Length = 236220 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 449 acatgatcaagagtaggaga 468 |||||||||||||||||||| Sbjct: 223070 acatgatcaagagtaggaga 223051
>gb|AC123066.4| Mus musculus BAC clone RP23-262I13 from chromosome 19, complete sequence Length = 206333 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 404 tctgtcatggtaacattcat 423 |||||||||||||||||||| Sbjct: 141422 tctgtcatggtaacattcat 141441
>gb|AC117188.3| Mus musculus BAC clone RP23-42E3 from 1, complete sequence Length = 226443 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 536 cacagcttagcagatttatc 555 |||||||||||||||||||| Sbjct: 144998 cacagcttagcagatttatc 144979
>ref|XM_736984.1| Plasmodium chabaudi chabaudi importin beta (PC000319.04.0) partial mRNA Length = 2508 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 462 taggagatatatcaacagcattaa 485 ||||||||||| |||||||||||| Sbjct: 2009 taggagatatagcaacagcattaa 2032
>gb|AC163625.5| Mus musculus BAC clone RP23-135K11 from chromosome 8, complete sequence Length = 228750 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 aggtgctattacacagtaga 98 |||||||||||||||||||| Sbjct: 90464 aggtgctattacacagtaga 90483
>emb|AL390056.7| Human DNA sequence from clone RP3-493I16 on chromosome 6 Contains the 5' end of the RAB3IP2 gene for RAB3 interacting protein 2 and a CpG island, complete sequence Length = 62390 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 536 cacagcttagcagatttatc 555 |||||||||||||||||||| Sbjct: 34909 cacagcttagcagatttatc 34928
>emb|CR954196.1| Medicago truncatula chromosome 5 clone mth2-157e5, COMPLETE SEQUENCE Length = 132419 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 caatttaagcatccccattg 62 |||||||||||||||||||| Sbjct: 39233 caatttaagcatccccattg 39214
>gb|AC110285.14| Homo sapiens chromosome 17, clone RP11-1055B8, complete sequence Length = 119991 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 423 tagcatcctgacctcctcca 442 |||||||||||||||||||| Sbjct: 11706 tagcatcctgacctcctcca 11725
>emb|AL645615.14| Mouse DNA sequence from clone RP23-395B22 on chromosome 11 Contains the Ddx52 gene for DEAD (Asp-Glu-Ala-Asp) box polypeptide 52, the Ap1gbp1 gene for AP1 gamma subunit binding protein 1, the Dusp14 gene for dual specificity phosphatase 14 and the Tada2l gene for transcriptional adaptor 2 (ADA2 homolog, yeast)-like, complete sequence Length = 196812 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 646 cagaagttttccagtctcag 665 |||||||||||||||||||| Sbjct: 26514 cagaagttttccagtctcag 26495
>gb|AC155276.3| Mus musculus BAC clone RP23-26E18 from chromosome 8, complete sequence Length = 234359 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 ttacatctttatgttgaaat 227 |||||||||||||||||||| Sbjct: 65199 ttacatctttatgttgaaat 65218
>gb|BC065342.1| Danio rerio DR1-associated protein 1 (negative cofactor 2 alpha), mRNA (cDNA clone MGC:77337 IMAGE:6967847), complete cds Length = 1802 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 570 ggaaatgagaccaatctaag 589 |||||||||||||||||||| Sbjct: 1226 ggaaatgagaccaatctaag 1207
>gb|AC090396.9| Homo sapiens chromosome 18, clone RP11-868G15, complete sequence Length = 215375 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 aagtcaagttctctcacaaa 128 |||||||||||||||||||| Sbjct: 185295 aagtcaagttctctcacaaa 185276
>emb|BX511109.4| Zebrafish DNA sequence from clone DKEY-288G16 in linkage group 7, complete sequence Length = 124061 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 ccatcaggattaaatgctaa 309 |||||||||||||||||||| Sbjct: 31126 ccatcaggattaaatgctaa 31145
>dbj|AB194638.1| Leek yellow stripe virus gene for coat protein, partial cds, isolate: Saga.Kikai#1 Length = 864 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 cagcagccttgagaaattca 202 |||||||||||||||||||| Sbjct: 728 cagcagccttgagaaattca 747
>dbj|AK133545.1| Mus musculus adult male xiphoid cartilage cDNA, RIKEN full-length enriched library, clone:5230401B21 product:DEAD (Asp-Glu-Ala-Asp) box polypeptide 52, full insert sequence Length = 1891 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 646 cagaagttttccagtctcag 665 |||||||||||||||||||| Sbjct: 1265 cagaagttttccagtctcag 1246
>gb|AC090354.8| Homo sapiens chromosome 18, clone RP11-735P10, complete sequence Length = 211162 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 aagtcaagttctctcacaaa 128 |||||||||||||||||||| Sbjct: 86221 aagtcaagttctctcacaaa 86202
>dbj|AK141200.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:C330001O10 product:DEAD (Asp-Glu-Ala-Asp) box polypeptide 52, full insert sequence Length = 2238 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 646 cagaagttttccagtctcag 665 |||||||||||||||||||| Sbjct: 1268 cagaagttttccagtctcag 1249
>dbj|AK166789.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0013G02 product:DEAD (Asp-Glu-Ala-Asp) box polypeptide 52, full insert sequence Length = 1800 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 646 cagaagttttccagtctcag 665 |||||||||||||||||||| Sbjct: 1220 cagaagttttccagtctcag 1201
>dbj|AK080767.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library, clone:A930105I09 product:ROK1-LIKE PROTEIN homolog [Rattus norvegicus], full insert sequence Length = 1764 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 646 cagaagttttccagtctcag 665 |||||||||||||||||||| Sbjct: 1232 cagaagttttccagtctcag 1213
>dbj|AK037626.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A130030G06 product:unclassifiable, full insert sequence Length = 2795 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 449 acatgatcaagagtaggaga 468 |||||||||||||||||||| Sbjct: 283 acatgatcaagagtaggaga 264
>ref|NM_205541.1| Danio rerio DR1-associated protein 1 (negative cofactor 2 alpha) (drap1), mRNA Length = 1802 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 570 ggaaatgagaccaatctaag 589 |||||||||||||||||||| Sbjct: 1226 ggaaatgagaccaatctaag 1207
>gb|AC096717.3| Homo sapiens BAC clone RP11-10O3 from 4, complete sequence Length = 109027 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 ctaaaatcttgtggaaaaat 376 |||||||||||||||||||| Sbjct: 18219 ctaaaatcttgtggaaaaat 18200
>gb|AC012193.6|AC012193 Arabidopsis thaliana chromosome 1 BAC T32E8 genomic sequence, complete sequence Length = 82454 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 126 aaattgagccaaaagaaaaagcta 149 |||||||| ||||||||||||||| Sbjct: 31678 aaattgagacaaaagaaaaagcta 31701
>gb|AC155816.3| Mus musculus BAC clone RP23-435J8 from chromosome 8, complete sequence Length = 207128 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 ttacatctttatgttgaaat 227 |||||||||||||||||||| Sbjct: 170477 ttacatctttatgttgaaat 170496
>gb|BC045853.1| Danio rerio DR1-associated protein 1 (negative cofactor 2 alpha), mRNA (cDNA clone MGC:56003 IMAGE:3819741), complete cds Length = 1838 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 570 ggaaatgagaccaatctaag 589 |||||||||||||||||||| Sbjct: 1282 ggaaatgagaccaatctaag 1263
>gb|AC154718.2| Mus musculus BAC clone RP24-370G12 from 14, complete sequence Length = 182043 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 449 acatgatcaagagtaggaga 468 |||||||||||||||||||| Sbjct: 135244 acatgatcaagagtaggaga 135263
>dbj|AP002008.5| Homo sapiens genomic DNA, chromosome 11q clone:RP11-794P6, complete sequences Length = 194973 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 291 catcaggattaaatgctaatgcat 314 ||||||||| |||||||||||||| Sbjct: 98206 catcaggataaaatgctaatgcat 98183
>gb|AC147475.3| Mus musculus BAC clone RP23-161B8 from 1, complete sequence Length = 186580 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 536 cacagcttagcagatttatc 555 |||||||||||||||||||| Sbjct: 16905 cacagcttagcagatttatc 16886
>emb|AL671392.5| Human DNA sequence from clone XXbac-92L3 on chromosome 6, complete sequence Length = 62014 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 536 cacagcttagcagatttatc 555 |||||||||||||||||||| Sbjct: 17555 cacagcttagcagatttatc 17536 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,785,408 Number of Sequences: 3902068 Number of extensions: 6785408 Number of successful extensions: 130651 Number of sequences better than 10.0: 86 Number of HSP's better than 10.0 without gapping: 85 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 130281 Number of HSP's gapped (non-prelim): 361 length of query: 665 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 642 effective length of database: 17,143,297,704 effective search space: 11005997125968 effective search space used: 11005997125968 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
