ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags30g02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY123421.1| Triticum aestivum putative plastid ribosomal prot... 628 e-177
2ref|XM_468458.1| Oryza sativa (japonica cultivar-group), mRNA 216 8e-53
3ref|XM_507552.1| PREDICTED Oryza sativa (japonica cultivar-group... 216 8e-53
4ref|XM_507062.2| PREDICTED Oryza sativa (japonica cultivar-group... 216 8e-53
5dbj|AK104610.1| Oryza sativa (japonica cultivar-group) cDNA clon... 216 8e-53
6dbj|AK071751.1| Oryza sativa (japonica cultivar-group) cDNA clon... 216 8e-53
7dbj|AK058369.1| Oryza sativa (japonica cultivar-group) cDNA clon... 216 8e-53
8gb|BT018060.1| Zea mays clone EL01N0532F02.c mRNA sequence 182 1e-42
9dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 94 8e-16
10dbj|AP004020.3| Oryza sativa (japonica cultivar-group) genomic D... 94 8e-16
11dbj|AP004026.3| Oryza sativa (japonica cultivar-group) genomic D... 94 8e-16
12ref|NM_114358.2| Arabidopsis thaliana RPL9; structural constitue... 58 4e-05
13gb|BT000914.1| Arabidopsis thaliana clone C105211 putative RP19 ... 58 4e-05
14gb|AY064028.1| Arabidopsis thaliana At3g44890 mRNA sequence 58 4e-05
15emb|Z11129.1|ATRPCL9 Arabidopsis thaliana mRNA for plastid ribos... 58 4e-05
16emb|Z11509.1|ATRPCL9G A.thaliana rp19 gene for chloroplast ribos... 58 4e-05
17emb|AL391254.2|ATF28D10 Arabidopsis thaliana DNA chromosome 3, B... 58 4e-05
18gb|AY085173.1| Arabidopsis thaliana clone 13554 mRNA, complete s... 50 0.010
19gb|AC090096.5| Homo sapiens chromosome 8, clone RP11-159C14, com... 48 0.040
20gb|AC011884.8| Homo sapiens chromosome , clone RP11-17N6, comple... 48 0.040
21emb|CR450806.9| Zebrafish DNA sequence from clone DKEY-110O13 in... 44 0.62
22gb|AC126007.16| Medicago truncatula clone mth2-11o4, complete se... 44 0.62
23gb|CP000321.1| Nitrobacter hamburgensis X14 plasmid 2, complete ... 44 0.62
24emb|BX323446.10| Zebrafish DNA sequence from clone DKEYP-99F11 i... 44 0.62
25gb|AC171014.3| Gallus gallus BAC clone CH261-89A18 from chromoso... 44 0.62
26emb|X14019.1|PSRPCL9 Pea mRNA for plastid ribosomal protein CL9 42 2.5
27emb|BX897736.7| Zebrafish DNA sequence from clone CH211-181B15 i... 42 2.5
28emb|CR318586.3| Zebrafish DNA sequence from clone CH211-239O22 i... 42 2.5
29dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.5
30dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete g... 42 2.5
31dbj|AP002541.2| Oryza sativa (japonica cultivar-group) genomic D... 42 2.5
32dbj|AP002868.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.5
33emb|AL357614.5|HS367B10 Homo sapiens chromosome 9 BAC RP11-367B1... 42 2.5
34emb|AL732455.6| Zebrafish DNA sequence from clone CH211-225J17 i... 42 2.5
35emb|CT476810.5| Zebrafish DNA sequence from clone ZFOS-260D6 in ... 42 2.5
36emb|AL163528.8|HS109K15 Homo sapiens chromosome 9 BAC RP11-109K1... 42 2.5
37emb|AL808017.4| Mouse DNA sequence from clone RP23-145G21 on chr... 42 2.5
38gb|AC091499.2| Drosophila melanogaster clone BACR33L22, complete... 40 9.7
39gb|AY460197.1| Notropis mekistocholas clone CFS15F2 microsatelli... 40 9.7
40gb|AC120402.10| Mus musculus chromosome 12, clone RP24-354N2, co... 40 9.7
41gb|AC127586.4| Mus musculus BAC clone RP24-142A16 from chromosom... 40 9.7
42gb|AC129609.3| Mus musculus BAC clone RP23-194H4 from chromosome... 40 9.7
43gb|AC123976.23| Medicago truncatula clone mth2-30j23, complete s... 40 9.7
44emb|AL596220.9| Human DNA sequence from clone RP11-295K2 on chro... 40 9.7
45emb|AL354943.9| Human DNA sequence from clone RP11-160A9 on chro... 40 9.7
46emb|AL139379.14| Human DNA sequence from clone RP11-358P11 on ch... 40 9.7
47emb|BX571680.7| Zebrafish DNA sequence from clone DKEY-30L20 in ... 40 9.7
48emb|AL592465.8| Mouse DNA sequence from clone RP23-36C4 on chrom... 40 9.7
49emb|BX470065.7| Zebrafish DNA sequence from clone DKEY-105H11 in... 40 9.7
50gb|AC012295.20| Mus musculus chromosome 11, clone RP23-48A17, co... 40 9.7
51dbj|AB229835.1| Aspergillus oryzae cDNA, contig sequence: AoEST6719 40 9.7
52dbj|AP007164.1| Aspergillus oryzae RIB40 genomic DNA, SC111 40 9.7
53gb|AC008820.6| Homo sapiens chromosome 5 clone CTD-2127F10, comp... 40 9.7
54emb|BX649242.6| Zebrafish DNA sequence from clone DKEY-264C3 in ... 40 9.7
55gb|AC159005.3| Mus musculus BAC clone RP23-67F4 from chromosome ... 40 9.7
56dbj|AK040098.1| Mus musculus 0 day neonate thymus cDNA, RIKEN fu... 40 9.7
57gb|AY999064.1| Equus caballus platelet glycoprotein IIIa integri... 40 9.7
58gb|AC016722.9| Homo sapiens BAC clone RP11-333I13 from 2, comple... 40 9.7
59gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 9.7
60dbj|AK189711.1| Mus musculus cDNA, clone:Y0G0150D04, strand:minu... 40 9.7
61dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 9.7
62emb|BX005043.8| Zebrafish DNA sequence from clone DKEY-3E19 in l... 40 9.7
63emb|CR318601.8| Zebrafish DNA sequence from clone CH211-274E20 i... 40 9.7
64gb|AC007453.1|AC007453 Drosophila melanogaster, chromosome 2R, r... 40 9.7
65gb|AE003820.3| Drosophila melanogaster chromosome 2R, section 30... 40 9.7
66gb|AC161462.5| Gallus gallus BAC clone CH261-174G12 from chromos... 40 9.7
67emb|BX004863.7| Zebrafish DNA sequence from clone DKEY-183N2 in ... 40 9.7
68emb|BX088570.6| Mouse DNA sequence from clone RP23-292J1 on chro... 40 9.7
69dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 40 9.7
70dbj|AP004935.1| Lotus japonicus genomic DNA, chromosome 5, clone... 40 9.7 
>gb|AY123421.1| Triticum aestivum putative plastid ribosomal protein CL9 mRNA,
           complete cds
          Length = 767

 Score =  628 bits (317), Expect = e-177
 Identities = 353/365 (96%)
 Strand = Plus / Minus

                                                                       
Query: 346 gctcacttggcatacacagtcagcctcaccttggctgtgacgtcggggtggagcttgatc 405
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 gctcacttggtatacacagtcagcctcaccttggctgtgacgtcggggtggagcttgatc 528

                                                                       
Query: 406 tccgcgacgtactccccgacctcgcggatctccgggacctccaccagccgcttgtccacg 465
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 tccgcgacgtactccccgacctcgcggatctccgggacctccaccagccgcttgtccacg 468

                                                                       
Query: 466 tccctgttaagctgtgacttgatgatgtcgatgagatcttgagctgtgacgctcccgaag 525
           |||||||||||||| |||||||||||||||| ||||||||| || |||||||||||||||
Sbjct: 467 tccctgttaagctgcgacttgatgatgtcgacgagatcttgcgccgtgacgctcccgaag 408

                                                                       
Query: 526 atctgctttcctttgccacctttacgtggcaccttgaatgccccgatggtttcgaagact 585
           |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 407 atctgctttcctttgccacctttacgtggcaccttgaacgccccaatggtttcgaagact 348

                                                                       
Query: 586 cgtgcgagttgttgtgcctcttcttttaccctcttcttttcagcctcgattctctcctgc 645
           || |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 347 cgcgcgagttgctgtgcctcttcttttaccctcttcttctcagcctcgattctctcctgc 288

                                                                       
Query: 646 tccaattgcatttccttgaggacgtcgggggtgagcagtgtggccttgcccttggggagc 705
           |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 287 tccagttgcatttccttgaggacgtcgggggtgagcagcgtggccttgcccttggggagc 228

                
Query: 706 aggaa 710
           |||||
Sbjct: 227 aggaa 223



 Score =  216 bits (109), Expect = 8e-53
 Identities = 159/174 (91%), Gaps = 5/174 (2%)
 Strand = Plus / Minus

                                                                       
Query: 144 tgaacaaaaaaggatttgacatattcacttgataaaagattcaacagcattcgctttctc 203
           ||||||||||||||||| | ||||||||||| ||||   ||||||||| |||||||||||
Sbjct: 760 tgaacaaaaaaggatttcatatattcacttg-taaatatttcaacagctttcgctttctc 702

                                                                       
Query: 204 cccgcttctcctaatgtatacaaggccatgaacaacatttttgtaaaacccatcctc--- 260
           | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||   
Sbjct: 701 cacgcttctcctaatgcatacaaggccatgaacaacatttttgtaaaacccatcctctat 642

                                                                 
Query: 261 -gctcccaggcacaaccgttgcaggatgttcggagtatatggcgagatcagact 313
            ||||||||||||||| ||||||||| |||||||||||||||||||||||||||
Sbjct: 641 agctcccaggcacaacagttgcaggacgttcggagtatatggcgagatcagact 588
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>ref|XM_468458.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 888

 Score =  216 bits (109), Expect = 8e-53
 Identities = 211/245 (86%)
 Strand = Plus / Minus

                                                                       
Query: 454 cgcttgtccacgtccctgttaagctgtgacttgatgatgtcgatgagatcttgagctgtg 513
           |||||||| || ||||| ||||| |||||||| |||||||| |  |||||||| ||||||
Sbjct: 479 cgcttgtcgacatccctattaagttgtgactttatgatgtcaacaagatcttgtgctgtg 420

                                                                       
Query: 514 acgctcccgaagatctgctttcctttgccacctttacgtggcaccttgaatgccccgatg 573
           |||||||| || ||||| |||||||| ||||||||||||||||| ||||||||||| || 
Sbjct: 419 acgctcccaaatatctgttttcctttcccacctttacgtggcactttgaatgccccaata 360

                                                                       
Query: 574 gtttcgaagactcgtgcgagttgttgtgcctcttcttttaccctcttcttttcagcctcg 633
           ||||| || || || || ||||| ||||||||||||||||||| |||||||||||| || 
Sbjct: 359 gtttcaaaaacacgggcaagttgctgtgcctcttcttttacccgcttcttttcagcatct 300

                                                                       
Query: 634 attctctcctgctccaattgcatttccttgaggacgtcgggggtgagcagtgtggccttg 693
           || |||||||| || | ||||||||||||||| || || ||||||||||| || ||||||
Sbjct: 299 atcctctcctgttctacttgcatttccttgagtacttctggggtgagcagcgttgccttg 240

                
Query: 694 ccctt 698
           |||||
Sbjct: 239 ccctt 235
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>ref|XM_507552.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1119_A01.21-1
           mRNA
          Length = 892

 Score =  216 bits (109), Expect = 8e-53
 Identities = 211/245 (86%)
 Strand = Plus / Minus

                                                                       
Query: 454 cgcttgtccacgtccctgttaagctgtgacttgatgatgtcgatgagatcttgagctgtg 513
           |||||||| || ||||| ||||| |||||||| |||||||| |  |||||||| ||||||
Sbjct: 483 cgcttgtcgacatccctattaagttgtgactttatgatgtcaacaagatcttgtgctgtg 424

                                                                       
Query: 514 acgctcccgaagatctgctttcctttgccacctttacgtggcaccttgaatgccccgatg 573
           |||||||| || ||||| |||||||| ||||||||||||||||| ||||||||||| || 
Sbjct: 423 acgctcccaaatatctgttttcctttcccacctttacgtggcactttgaatgccccaata 364

                                                                       
Query: 574 gtttcgaagactcgtgcgagttgttgtgcctcttcttttaccctcttcttttcagcctcg 633
           ||||| || || || || ||||| ||||||||||||||||||| |||||||||||| || 
Sbjct: 363 gtttcaaaaacacgggcaagttgctgtgcctcttcttttacccgcttcttttcagcatct 304

                                                                       
Query: 634 attctctcctgctccaattgcatttccttgaggacgtcgggggtgagcagtgtggccttg 693
           || |||||||| || | ||||||||||||||| || || ||||||||||| || ||||||
Sbjct: 303 atcctctcctgttctacttgcatttccttgagtacttctggggtgagcagcgttgccttg 244

                
Query: 694 ccctt 698
           |||||
Sbjct: 243 ccctt 239
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>ref|XM_507062.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1119_A01.21-1
           mRNA
          Length = 897

 Score =  216 bits (109), Expect = 8e-53
 Identities = 211/245 (86%)
 Strand = Plus / Minus

                                                                       
Query: 454 cgcttgtccacgtccctgttaagctgtgacttgatgatgtcgatgagatcttgagctgtg 513
           |||||||| || ||||| ||||| |||||||| |||||||| |  |||||||| ||||||
Sbjct: 476 cgcttgtcgacatccctattaagttgtgactttatgatgtcaacaagatcttgtgctgtg 417

                                                                       
Query: 514 acgctcccgaagatctgctttcctttgccacctttacgtggcaccttgaatgccccgatg 573
           |||||||| || ||||| |||||||| ||||||||||||||||| ||||||||||| || 
Sbjct: 416 acgctcccaaatatctgttttcctttcccacctttacgtggcactttgaatgccccaata 357

                                                                       
Query: 574 gtttcgaagactcgtgcgagttgttgtgcctcttcttttaccctcttcttttcagcctcg 633
           ||||| || || || || ||||| ||||||||||||||||||| |||||||||||| || 
Sbjct: 356 gtttcaaaaacacgggcaagttgctgtgcctcttcttttacccgcttcttttcagcatct 297

                                                                       
Query: 634 attctctcctgctccaattgcatttccttgaggacgtcgggggtgagcagtgtggccttg 693
           || |||||||| || | ||||||||||||||| || || ||||||||||| || ||||||
Sbjct: 296 atcctctcctgttctacttgcatttccttgagtacttctggggtgagcagcgttgccttg 237

                
Query: 694 ccctt 698
           |||||
Sbjct: 236 ccctt 232
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>dbj|AK104610.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-C08, full
           insert sequence
          Length = 888

 Score =  216 bits (109), Expect = 8e-53
 Identities = 211/245 (86%)
 Strand = Plus / Minus

                                                                       
Query: 454 cgcttgtccacgtccctgttaagctgtgacttgatgatgtcgatgagatcttgagctgtg 513
           |||||||| || ||||| ||||| |||||||| |||||||| |  |||||||| ||||||
Sbjct: 479 cgcttgtcgacatccctattaagttgtgactttatgatgtcaacaagatcttgtgctgtg 420

                                                                       
Query: 514 acgctcccgaagatctgctttcctttgccacctttacgtggcaccttgaatgccccgatg 573
           |||||||| || ||||| |||||||| ||||||||||||||||| ||||||||||| || 
Sbjct: 419 acgctcccaaatatctgttttcctttcccacctttacgtggcactttgaatgccccaata 360

                                                                       
Query: 574 gtttcgaagactcgtgcgagttgttgtgcctcttcttttaccctcttcttttcagcctcg 633
           ||||| || || || || ||||| ||||||||||||||||||| |||||||||||| || 
Sbjct: 359 gtttcaaaaacacgggcaagttgctgtgcctcttcttttacccgcttcttttcagcatct 300

                                                                       
Query: 634 attctctcctgctccaattgcatttccttgaggacgtcgggggtgagcagtgtggccttg 693
           || |||||||| || | ||||||||||||||| || || ||||||||||| || ||||||
Sbjct: 299 atcctctcctgttctacttgcatttccttgagtacttctggggtgagcagcgttgccttg 240

                
Query: 694 ccctt 698
           |||||
Sbjct: 239 ccctt 235
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>dbj|AK071751.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023111I07, full
           insert sequence
          Length = 892

 Score =  216 bits (109), Expect = 8e-53
 Identities = 211/245 (86%)
 Strand = Plus / Minus

                                                                       
Query: 454 cgcttgtccacgtccctgttaagctgtgacttgatgatgtcgatgagatcttgagctgtg 513
           |||||||| || ||||| ||||| |||||||| |||||||| |  |||||||| ||||||
Sbjct: 483 cgcttgtcgacatccctattaagttgtgactttatgatgtcaacaagatcttgtgctgtg 424

                                                                       
Query: 514 acgctcccgaagatctgctttcctttgccacctttacgtggcaccttgaatgccccgatg 573
           |||||||| || ||||| |||||||| ||||||||||||||||| ||||||||||| || 
Sbjct: 423 acgctcccaaatatctgttttcctttcccacctttacgtggcactttgaatgccccaata 364

                                                                       
Query: 574 gtttcgaagactcgtgcgagttgttgtgcctcttcttttaccctcttcttttcagcctcg 633
           ||||| || || || || ||||| ||||||||||||||||||| |||||||||||| || 
Sbjct: 363 gtttcaaaaacacgggcaagttgctgtgcctcttcttttacccgcttcttttcagcatct 304

                                                                       
Query: 634 attctctcctgctccaattgcatttccttgaggacgtcgggggtgagcagtgtggccttg 693
           || |||||||| || | ||||||||||||||| || || ||||||||||| || ||||||
Sbjct: 303 atcctctcctgttctacttgcatttccttgagtacttctggggtgagcagcgttgccttg 244

                
Query: 694 ccctt 698
           |||||
Sbjct: 243 ccctt 239
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>dbj|AK058369.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-G04, full
           insert sequence
          Length = 897

 Score =  216 bits (109), Expect = 8e-53
 Identities = 211/245 (86%)
 Strand = Plus / Minus

                                                                       
Query: 454 cgcttgtccacgtccctgttaagctgtgacttgatgatgtcgatgagatcttgagctgtg 513
           |||||||| || ||||| ||||| |||||||| |||||||| |  |||||||| ||||||
Sbjct: 476 cgcttgtcgacatccctattaagttgtgactttatgatgtcaacaagatcttgtgctgtg 417

                                                                       
Query: 514 acgctcccgaagatctgctttcctttgccacctttacgtggcaccttgaatgccccgatg 573
           |||||||| || ||||| |||||||| ||||||||||||||||| ||||||||||| || 
Sbjct: 416 acgctcccaaatatctgttttcctttcccacctttacgtggcactttgaatgccccaata 357

                                                                       
Query: 574 gtttcgaagactcgtgcgagttgttgtgcctcttcttttaccctcttcttttcagcctcg 633
           ||||| || || || || ||||| ||||||||||||||||||| |||||||||||| || 
Sbjct: 356 gtttcaaaaacacgggcaagttgctgtgcctcttcttttacccgcttcttttcagcatct 297

                                                                       
Query: 634 attctctcctgctccaattgcatttccttgaggacgtcgggggtgagcagtgtggccttg 693
           || |||||||| || | ||||||||||||||| || || ||||||||||| || ||||||
Sbjct: 296 atcctctcctgttctacttgcatttccttgagtacttctggggtgagcagcgttgccttg 237

                
Query: 694 ccctt 698
           |||||
Sbjct: 236 ccctt 232
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>gb|BT018060.1| Zea mays clone EL01N0532F02.c mRNA sequence
          Length = 967

 Score =  182 bits (92), Expect = 1e-42
 Identities = 272/332 (81%)
 Strand = Plus / Minus

                                                                       
Query: 379 gctgtgacgtcggggtggagcttgatctccgcgacgtactccccgacctcgcggatctcc 438
           ||||| ||||| ||||| ||||||||||| || || ||||| ||||  || ||||| || 
Sbjct: 625 gctgtcacgtctgggtgaagcttgatctctgcaacatactctccgatttcacggatttct 566

                                                                       
Query: 439 gggacctccaccagccgcttgtccacgtccctgttaagctgtgacttgatgatgtcgatg 498
           || |||  |||||||  |||||| || ||||| ||||| |||||||| || ||||| |  
Sbjct: 565 ggaaccgtcaccagcttcttgtcgacatccctattaagttgtgactttattatgtcaaca 506

                                                                       
Query: 499 agatcttgagctgtgacgctcccgaagatctgctttcctttgccacctttacgtggcacc 558
           | ||| || || ||||| ||||| |||||||| |||||||| |||||||| || || |  
Sbjct: 505 acatcctgtgccgtgacactcccaaagatctgttttccttttccacctttgcgagggagt 446

                                                                       
Query: 559 ttgaatgccccgatggtttcgaagactcgtgcgagttgttgtgcctcttcttttaccctc 618
           ||||| || || |||||||| || ||||| || |||||||| || ||||||||||||| |
Sbjct: 445 ttgaaagcgccaatggtttcaaaaactcgagcaagttgttgcgcgtcttcttttacccgc 386

                                                                       
Query: 619 ttcttttcagcctcgattctctcctgctccaattgcatttccttgaggacgtcgggggtg 678
           ||||||||||| || ||||||||||||||||  ||||||||||||||||| || ||||| 
Sbjct: 385 ttcttttcagcttctattctctcctgctccagctgcatttccttgaggacttctggggtc 326

                                           
Query: 679 agcagtgtggccttgcccttggggagcaggaa 710
           || ||||| |||||||||||||| || |||||
Sbjct: 325 agaagtgtagccttgcccttgggaaggaggaa 294
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 93.7 bits (47), Expect = 8e-16
 Identities = 86/99 (86%)
 Strand = Plus / Plus

                                                                            
Query: 517      ctcccgaagatctgctttcctttgccacctttacgtggcaccttgaatgccccgatggtt 576
                ||||| || ||||| |||||||| ||||||||||||||||| ||||||||||| || |||
Sbjct: 35339754 ctcccaaatatctgttttcctttcccacctttacgtggcactttgaatgccccaatagtt 35339813

                                                       
Query: 577      tcgaagactcgtgcgagttgttgtgcctcttcttttacc 615
                || || || || || ||||| ||||||||||||||||||
Sbjct: 35339814 tcaaaaacacgggcaagttgctgtgcctcttcttttacc 35339852



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                               
Query: 472      ttaagctgtgacttgatgatgtcgatgagatcttgagctgtgacgct 518
                ||||| |||||||| |||||||| |  |||||||| |||||||||||
Sbjct: 35339625 ttaagttgtgactttatgatgtcaacaagatcttgtgctgtgacgct 35339671



 Score = 44.1 bits (22), Expect = 0.62
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                                  
Query: 611      ttaccctcttcttttcagcctcgattctctcctgctccaattgcatttcc 660
                |||||| |||||||||||| || || |||||||| || | ||||||||||
Sbjct: 35340117 ttacccgcttcttttcagcatctatcctctcctgttctacttgcatttcc 35340166
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>dbj|AP004020.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1119_A01
          Length = 108727

 Score = 93.7 bits (47), Expect = 8e-16
 Identities = 86/99 (86%)
 Strand = Plus / Plus

                                                                         
Query: 517   ctcccgaagatctgctttcctttgccacctttacgtggcaccttgaatgccccgatggtt 576
             ||||| || ||||| |||||||| ||||||||||||||||| ||||||||||| || |||
Sbjct: 90088 ctcccaaatatctgttttcctttcccacctttacgtggcactttgaatgccccaatagtt 90147

                                                    
Query: 577   tcgaagactcgtgcgagttgttgtgcctcttcttttacc 615
             || || || || || ||||| ||||||||||||||||||
Sbjct: 90148 tcaaaaacacgggcaagttgctgtgcctcttcttttacc 90186



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                            
Query: 472   ttaagctgtgacttgatgatgtcgatgagatcttgagctgtgacgct 518
             ||||| |||||||| |||||||| |  |||||||| |||||||||||
Sbjct: 89959 ttaagttgtgactttatgatgtcaacaagatcttgtgctgtgacgct 90005



 Score = 44.1 bits (22), Expect = 0.62
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                               
Query: 611   ttaccctcttcttttcagcctcgattctctcctgctccaattgcatttcc 660
             |||||| |||||||||||| || || |||||||| || | ||||||||||
Sbjct: 90451 ttacccgcttcttttcagcatctatcctctcctgttctacttgcatttcc 90500
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>dbj|AP004026.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2,
           BAC clone:OJ1136_C04
          Length = 103194

 Score = 93.7 bits (47), Expect = 8e-16
 Identities = 86/99 (86%)
 Strand = Plus / Plus

                                                                       
Query: 517 ctcccgaagatctgctttcctttgccacctttacgtggcaccttgaatgccccgatggtt 576
           ||||| || ||||| |||||||| ||||||||||||||||| ||||||||||| || |||
Sbjct: 302 ctcccaaatatctgttttcctttcccacctttacgtggcactttgaatgccccaatagtt 361

                                                  
Query: 577 tcgaagactcgtgcgagttgttgtgcctcttcttttacc 615
           || || || || || ||||| ||||||||||||||||||
Sbjct: 362 tcaaaaacacgggcaagttgctgtgcctcttcttttacc 400



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 472 ttaagctgtgacttgatgatgtcgatgagatcttgagctgtgacgct 518
           ||||| |||||||| |||||||| |  |||||||| |||||||||||
Sbjct: 173 ttaagttgtgactttatgatgtcaacaagatcttgtgctgtgacgct 219



 Score = 44.1 bits (22), Expect = 0.62
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                             
Query: 611 ttaccctcttcttttcagcctcgattctctcctgctccaattgcatttcc 660
           |||||| |||||||||||| || || |||||||| || | ||||||||||
Sbjct: 665 ttacccgcttcttttcagcatctatcctctcctgttctacttgcatttcc 714
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>ref|NM_114358.2| Arabidopsis thaliana RPL9; structural constituent of ribosome
           AT3G44890 (RPL9) mRNA, complete cds
          Length = 919

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                    
Query: 475 agctgtgacttgatgatgtcgatgagatcttgagctgtgac 515
           |||||||| ||||||||||||| ||| ||||||||||||||
Sbjct: 537 agctgtgatttgatgatgtcgacgaggtcttgagctgtgac 497



 Score = 44.1 bits (22), Expect = 0.62
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 592 agttgttgtgcctcttcttttaccct 617
           |||||||||||||||||||| |||||
Sbjct: 420 agttgttgtgcctcttctttcaccct 395
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>gb|BT000914.1| Arabidopsis thaliana clone C105211 putative RP19 gene for
           chloroplast ribosomal protein CL9 (At3g44890) mRNA,
           complete cds
          Length = 625

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                    
Query: 475 agctgtgacttgatgatgtcgatgagatcttgagctgtgac 515
           |||||||| ||||||||||||| ||| ||||||||||||||
Sbjct: 467 agctgtgatttgatgatgtcgacgaggtcttgagctgtgac 427



 Score = 44.1 bits (22), Expect = 0.62
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 592 agttgttgtgcctcttcttttaccct 617
           |||||||||||||||||||| |||||
Sbjct: 350 agttgttgtgcctcttctttcaccct 325
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>gb|AY064028.1| Arabidopsis thaliana At3g44890 mRNA sequence
          Length = 901

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                    
Query: 475 agctgtgacttgatgatgtcgatgagatcttgagctgtgac 515
           |||||||| ||||||||||||| ||| ||||||||||||||
Sbjct: 535 agctgtgatttgatgatgtcgacgaggtcttgagctgtgac 495



 Score = 44.1 bits (22), Expect = 0.62
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 592 agttgttgtgcctcttcttttaccct 617
           |||||||||||||||||||| |||||
Sbjct: 418 agttgttgtgcctcttctttcaccct 393
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>emb|Z11129.1|ATRPCL9 Arabidopsis thaliana mRNA for plastid ribosomal protein CL9 (rpl9
           gene)
          Length = 858

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                    
Query: 475 agctgtgacttgatgatgtcgatgagatcttgagctgtgac 515
           |||||||| ||||||||||||| ||| ||||||||||||||
Sbjct: 476 agctgtgatttgatgatgtcgacgaggtcttgagctgtgac 436



 Score = 44.1 bits (22), Expect = 0.62
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 592 agttgttgtgcctcttcttttaccct 617
           |||||||||||||||||||| |||||
Sbjct: 359 agttgttgtgcctcttctttcaccct 334
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>emb|Z11509.1|ATRPCL9G A.thaliana rp19 gene for chloroplast ribosomal protein CL9
          Length = 2737

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                     
Query: 475  agctgtgacttgatgatgtcgatgagatcttgagctgtgac 515
            |||||||| ||||||||||||| ||| ||||||||||||||
Sbjct: 1813 agctgtgatttgatgatgtcgacgaggtcttgagctgtgac 1773



 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 592  agttgttgtgcctcttcttt 611
            ||||||||||||||||||||
Sbjct: 1613 agttgttgtgcctcttcttt 1594
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>emb|AL391254.2|ATF28D10 Arabidopsis thaliana DNA chromosome 3, BAC clone F28D10
          Length = 49890

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                      
Query: 475   agctgtgacttgatgatgtcgatgagatcttgagctgtgac 515
             |||||||| ||||||||||||| ||| ||||||||||||||
Sbjct: 28290 agctgtgatttgatgatgtcgacgaggtcttgagctgtgac 28250



 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 592   agttgttgtgcctcttcttt 611
             ||||||||||||||||||||
Sbjct: 28090 agttgttgtgcctcttcttt 28071
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>gb|AY085173.1| Arabidopsis thaliana clone 13554 mRNA, complete sequence
          Length = 870

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 475 agctgtgacttgatgatgtcgatgagatcttgagctgtgac 515
           ||||| || ||||||||||||| ||| ||||||||||||||
Sbjct: 518 agctgcgatttgatgatgtcgacgaggtcttgagctgtgac 478
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>gb|AC090096.5| Homo sapiens chromosome 8, clone RP11-159C14, complete sequence
          Length = 173158

 Score = 48.1 bits (24), Expect = 0.040
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 95    atggataaaaaatctaatttattt 118
             ||||||||||||||||||||||||
Sbjct: 24065 atggataaaaaatctaatttattt 24088
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>gb|AC011884.8| Homo sapiens chromosome , clone RP11-17N6, complete sequence
          Length = 163009

 Score = 48.1 bits (24), Expect = 0.040
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                      
Query: 95     atggataaaaaatctaatttattt 118
              ||||||||||||||||||||||||
Sbjct: 101508 atggataaaaaatctaatttattt 101531
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>emb|CR450806.9| Zebrafish DNA sequence from clone DKEY-110O13 in linkage group 24,
              complete sequence
          Length = 217292

 Score = 44.1 bits (22), Expect = 0.62
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 41     tctgagctggcttattcaatac 62
              ||||||||||||||||||||||
Sbjct: 160437 tctgagctggcttattcaatac 160416
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>gb|AC126007.16| Medicago truncatula clone mth2-11o4, complete sequence
          Length = 106747

 Score = 44.1 bits (22), Expect = 0.62
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                               
Query: 520   ccgaagatctgctttcctttgccacctttacgtggcaccttgaatgcccc 569
             |||||||| || |||||||| |||||||||||   ||||||||| |||||
Sbjct: 29892 ccgaagatttgttttcctttaccacctttacgcttcaccttgaaagcccc 29843
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>gb|CP000321.1| Nitrobacter hamburgensis X14 plasmid 2, complete sequence
          Length = 188318

 Score = 44.1 bits (22), Expect = 0.62
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 647    ccaattgcatttccttgaggac 668
              ||||||||||||||||||||||
Sbjct: 182824 ccaattgcatttccttgaggac 182845
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>emb|BX323446.10| Zebrafish DNA sequence from clone DKEYP-99F11 in linkage group 17,
              complete sequence
          Length = 184290

 Score = 44.1 bits (22), Expect = 0.62
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 8      agtgtactattattacatgtagatat 33
              |||||| |||||||||||||||||||
Sbjct: 104023 agtgtattattattacatgtagatat 103998
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>gb|AC171014.3| Gallus gallus BAC clone CH261-89A18 from chromosome ul, complete
             sequence
          Length = 181265

 Score = 44.1 bits (22), Expect = 0.62
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 111   atttatttagcaaaatgggtca 132
             ||||||||||||||||||||||
Sbjct: 35565 atttatttagcaaaatgggtca 35544
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>emb|X14019.1|PSRPCL9 Pea mRNA for plastid ribosomal protein CL9
          Length = 901

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 75/93 (80%)
 Strand = Plus / Minus

                                                                       
Query: 456 cttgtccacgtccctgttaagctgtgacttgatgatgtcgatgagatcttgagctgtgac 515
           ||||||||| ||||| | ||| |||| ||| || ||||| |  ||||||||||| || ||
Sbjct: 487 cttgtccacctccctttgaagttgtgcctttattatgtccacaagatcttgagccgtaac 428

                                            
Query: 516 gctcccgaagatctgctttcctttgccaccttt 548
            || || || ||||| |||||||| ||||||||
Sbjct: 427 acttccaaatatctgttttcctttaccaccttt 395
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>emb|BX897736.7| Zebrafish DNA sequence from clone CH211-181B15 in linkage group 17,
             complete sequence
          Length = 141987

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 10    tgtactattattacatgtagatata 34
             ||||||||||||||||||| |||||
Sbjct: 33074 tgtactattattacatgtaaatata 33098
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>emb|CR318586.3| Zebrafish DNA sequence from clone CH211-239O22 in linkage group 7,
            complete sequence
          Length = 30205

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 188  cagcattcgctttctccccgcttct 212
            ||||||||||||||||||| |||||
Sbjct: 9247 cagcattcgctttctccccccttct 9223
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 606     ttcttttaccctcttcttttc 626
               |||||||||||||||||||||
Sbjct: 1056358 ttcttttaccctcttcttttc 1056338
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>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 478     tgtgacttgatgatgtcgatg 498
               |||||||||||||||||||||
Sbjct: 1067353 tgtgacttgatgatgtcgatg 1067333
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>dbj|AP002541.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0494A10
          Length = 145576

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 606   ttcttttaccctcttcttttc 626
             |||||||||||||||||||||
Sbjct: 94026 ttcttttaccctcttcttttc 94006
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>dbj|AP002868.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0698A04
          Length = 141079

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 606   ttcttttaccctcttcttttc 626
             |||||||||||||||||||||
Sbjct: 25672 ttcttttaccctcttcttttc 25652
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>emb|AL357614.5|HS367B10 Homo sapiens chromosome 9 BAC RP11-367B10, complete sequence
          Length = 182378

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 94    aatggataaaaaatctaattt 114
             |||||||||||||||||||||
Sbjct: 39388 aatggataaaaaatctaattt 39368
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>emb|AL732455.6| Zebrafish DNA sequence from clone CH211-225J17 in linkage group 7,
             complete sequence
          Length = 192578

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 188   cagcattcgctttctccccgcttct 212
             ||||||||||||||||||| |||||
Sbjct: 56677 cagcattcgctttctccccccttct 56701
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>emb|CT476810.5| Zebrafish DNA sequence from clone ZFOS-260D6 in linkage group 7,
             complete sequence
          Length = 19313

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 188   cagcattcgctttctccccgcttct 212
             ||||||||||||||||||| |||||
Sbjct: 10067 cagcattcgctttctccccccttct 10091
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>emb|AL163528.8|HS109K15 Homo sapiens chromosome 9 BAC RP11-109K15, complete sequence
          Length = 184517

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 94    aatggataaaaaatctaattt 114
             |||||||||||||||||||||
Sbjct: 16258 aatggataaaaaatctaattt 16278
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>emb|AL808017.4| Mouse DNA sequence from clone RP23-145G21 on chromosome X, complete
              sequence
          Length = 183291

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 529    tgctttcctttgccaccttta 549
              |||||||||||||||||||||
Sbjct: 165043 tgctttcctttgccaccttta 165063
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>gb|AC091499.2| Drosophila melanogaster clone BACR33L22, complete sequence
          Length = 182105

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 237    aacatttttgtaaaacccat 256
              ||||||||||||||||||||
Sbjct: 100012 aacatttttgtaaaacccat 99993
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>gb|AY460197.1| Notropis mekistocholas clone CFS15F2 microsatellite sequence
          Length = 539

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 137 caacaaatgaacaaaaaagg 156
           ||||||||||||||||||||
Sbjct: 205 caacaaatgaacaaaaaagg 224
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>gb|AC120402.10| Mus musculus chromosome 12, clone RP24-354N2, complete sequence
          Length = 122843

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 523   aagatctgctttcctttgcc 542
             ||||||||||||||||||||
Sbjct: 77778 aagatctgctttcctttgcc 77759
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>gb|AC127586.4| Mus musculus BAC clone RP24-142A16 from chromosome 7, complete sequence
          Length = 164692

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 33    tagtacactctgagctggct 52
             ||||||||||||||||||||
Sbjct: 77481 tagtacactctgagctggct 77500
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>gb|AC129609.3| Mus musculus BAC clone RP23-194H4 from chromosome 7, complete sequence
          Length = 225829

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 33     tagtacactctgagctggct 52
              ||||||||||||||||||||
Sbjct: 204505 tagtacactctgagctggct 204486
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>gb|AC123976.23| Medicago truncatula clone mth2-30j23, complete sequence
          Length = 112917

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 625   tcagcctcgattctctcctgctccaatt 652
             |||| |||||||||||||||| ||||||
Sbjct: 77564 tcagactcgattctctcctgccccaatt 77537
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>emb|AL596220.9| Human DNA sequence from clone RP11-295K2 on chromosome 1 Contains the
             5' end of the TPR gene for translocated promoter region
             (to activated MET oncogene), a novel gene, the 3' end of
             the PDC gene for phosducin and a novel gene, complete
             sequence
          Length = 130266

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 55    ttcaatacaagtaggatcat 74
             ||||||||||||||||||||
Sbjct: 83504 ttcaatacaagtaggatcat 83485
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>emb|AL354943.9| Human DNA sequence from clone RP11-160A9 on chromosome 6 Contains a
             solute carrier family 25 (mitochondrial carrier, adenine
             nucleotide translocator) member 6 (SLC25A6) pseudogene, an
             NADH dehydrogenase (ubiquinone) 1 alpha/beta subcomplex 1
             (8kD, SDAP) (NDUFAB1) pseudogene, the 5' end of the gene
             for stromal membrane-associated protein SMAP1 and a CpG
             island, complete sequence
          Length = 151445

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 141   aaatgaacaaaaaaggatttgaca 164
             ||||||||||||||| ||||||||
Sbjct: 80466 aaatgaacaaaaaagcatttgaca 80489
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>emb|AL139379.14| Human DNA sequence from clone RP11-358P11 on chromosome 13 Contains a
             CpG island, complete sequence
          Length = 166237

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 147   acaaaaaaggatttgacata 166
             ||||||||||||||||||||
Sbjct: 55683 acaaaaaaggatttgacata 55664
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>emb|BX571680.7| Zebrafish DNA sequence from clone DKEY-30L20 in linkage group 7,
             complete sequence
          Length = 145338

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 149   aaaaaaggatttgacatatt 168
             ||||||||||||||||||||
Sbjct: 55372 aaaaaaggatttgacatatt 55353
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>emb|AL592465.8| Mouse DNA sequence from clone RP23-36C4 on chromosome 11 Contains the
              Tbx4 gene for T-box 4, a ribosomal protein L21 (Rpl21)
              pseudogene and the 3' end of the Brip1 gene for BRCA1
              interacting protein C-terminal helicase 1, complete
              sequence
          Length = 238358

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 134    tgccaacaaatgaacaaaaaagga 157
              |||||| |||||||||||||||||
Sbjct: 131449 tgccaagaaatgaacaaaaaagga 131426
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>emb|BX470065.7| Zebrafish DNA sequence from clone DKEY-105H11 in linkage group 24,
              complete sequence
          Length = 198444

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 100    taaaaaatctaatttattta 119
              ||||||||||||||||||||
Sbjct: 157046 taaaaaatctaatttattta 157065
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>gb|AC012295.20| Mus musculus chromosome 11, clone RP23-48A17, complete sequence
          Length = 187364

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 134    tgccaacaaatgaacaaaaaagga 157
              |||||| |||||||||||||||||
Sbjct: 184895 tgccaagaaatgaacaaaaaagga 184872
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>dbj|AB229835.1| Aspergillus oryzae cDNA, contig sequence: AoEST6719
          Length = 269

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 621 cttttcagcctcgattctctcctg 644
           |||||||||||||||| |||||||
Sbjct: 163 cttttcagcctcgattttctcctg 140
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>dbj|AP007164.1| Aspergillus oryzae RIB40 genomic DNA, SC111
          Length = 2356219

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 621    cttttcagcctcgattctctcctg 644
              |||||||||||||||| |||||||
Sbjct: 618455 cttttcagcctcgattttctcctg 618478
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>gb|AC008820.6| Homo sapiens chromosome 5 clone CTD-2127F10, complete sequence
          Length = 59624

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 138   aacaaatgaacaaaaaagga 157
             ||||||||||||||||||||
Sbjct: 15797 aacaaatgaacaaaaaagga 15816
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>emb|BX649242.6| Zebrafish DNA sequence from clone DKEY-264C3 in linkage group 17,
             complete sequence
          Length = 147772

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 101   aaaaaatctaatttatttag 120
             ||||||||||||||||||||
Sbjct: 47263 aaaaaatctaatttatttag 47244
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>gb|AC159005.3| Mus musculus BAC clone RP23-67F4 from chromosome 7, complete sequence
          Length = 230018

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 33     tagtacactctgagctggct 52
              ||||||||||||||||||||
Sbjct: 204864 tagtacactctgagctggct 204883
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>dbj|AK040098.1| Mus musculus 0 day neonate thymus cDNA, RIKEN full-length enriched
           library, clone:A430059N17 product:unclassifiable, full
           insert sequence
          Length = 723

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 523 aagatctgctttcctttgcc 542
           ||||||||||||||||||||
Sbjct: 245 aagatctgctttcctttgcc 264
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>gb|AY999064.1| Equus caballus platelet glycoprotein IIIa integrin subunit beta 3
            mRNA, complete cds
          Length = 2739

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 119  agcaaaatgggtcactgccaacaa 142
            ||||||||||| ||||||||||||
Sbjct: 2274 agcaaaatgggacactgccaacaa 2297
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>gb|AC016722.9| Homo sapiens BAC clone RP11-333I13 from 2, complete sequence
          Length = 149995

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 135   gccaacaaatgaacaaaaaa 154
             ||||||||||||||||||||
Sbjct: 53799 gccaacaaatgaacaaaaaa 53780
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 437     ccgggacctccaccagccgc 456
               ||||||||||||||||||||
Sbjct: 2270695 ccgggacctccaccagccgc 2270714
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>dbj|AK189711.1| Mus musculus cDNA, clone:Y0G0150D04, strand:minus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000028347, based on BLAT search
          Length = 436

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 527 tctgctttcctttgccacct 546
           ||||||||||||||||||||
Sbjct: 248 tctgctttcctttgccacct 229
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 425     cctcgcggatctccgggacc 444
               ||||||||||||||||||||
Sbjct: 3947119 cctcgcggatctccgggacc 3947100
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>emb|BX005043.8| Zebrafish DNA sequence from clone DKEY-3E19 in linkage group 14,
             complete sequence
          Length = 238499

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 207   gcttctcctaatgtatacaa 226
             ||||||||||||||||||||
Sbjct: 27669 gcttctcctaatgtatacaa 27650
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>emb|CR318601.8| Zebrafish DNA sequence from clone CH211-274E20 in linkage group 7,
              complete sequence
          Length = 165501

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 149    aaaaaaggatttgacatatt 168
              ||||||||||||||||||||
Sbjct: 131842 aaaaaaggatttgacatatt 131823
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>gb|AC007453.1|AC007453 Drosophila melanogaster, chromosome 2R, region 49C1-49D3, P1 clones
              DS04499, DS06146, and DS00455, complete sequence
          Length = 145055

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 237    aacatttttgtaaaacccat 256
              ||||||||||||||||||||
Sbjct: 136775 aacatttttgtaaaacccat 136756
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>gb|AE003820.3| Drosophila melanogaster chromosome 2R, section 30 of 73 of the complete
             sequence
          Length = 263912

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 237   aacatttttgtaaaacccat 256
             ||||||||||||||||||||
Sbjct: 20987 aacatttttgtaaaacccat 20968
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>gb|AC161462.5| Gallus gallus BAC clone CH261-174G12 from chromosome ul, complete
              sequence
          Length = 238858

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 102    aaaaatctaatttatttagc 121
              ||||||||||||||||||||
Sbjct: 229957 aaaaatctaatttatttagc 229976
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>emb|BX004863.7| Zebrafish DNA sequence from clone DKEY-183N2 in linkage group 7,
           complete sequence
          Length = 44979

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 101 aaaaaatctaatttatttag 120
           ||||||||||||||||||||
Sbjct: 228 aaaaaatctaatttatttag 209
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>emb|BX088570.6| Mouse DNA sequence from clone RP23-292J1 on chromosome 4, complete
              sequence
          Length = 244187

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 142    aatgaacaaaaaaggatttg 161
              ||||||||||||||||||||
Sbjct: 202493 aatgaacaaaaaaggatttg 202474
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 415     tactccccgacctcgcggatctcc 438
               ||||||||| ||||||||||||||
Sbjct: 3563922 tactccccgtcctcgcggatctcc 3563945
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>dbj|AP004935.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT02L13, TM0095b,
            complete sequence
          Length = 6348

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 110  aatttatttagcaaaatggg 129
            ||||||||||||||||||||
Sbjct: 1525 aatttatttagcaaaatggg 1506


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,533,585
Number of Sequences: 3902068
Number of extensions: 6533585
Number of successful extensions: 142779
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 142397
Number of HSP's gapped (non-prelim): 379
length of query: 710
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 687
effective length of database: 17,143,297,704
effective search space: 11777445522648
effective search space used: 11777445522648
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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