>emb|X66376.1|HVJASIP H.vulgare mRNA for jasmonate-induced protein
          Length = 1892

 Score = 1189 bits (600), Expect = 0.0
 Identities = 616/619 (99%), Gaps = 2/619 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    caaattggtatgtgt-aaggaaagacacttattttt-aactcgtactgagttccatatag 58
            ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1835 caaattggtatgtgtcaaggaaagacacttatttttcaactcgtactgagttccatatag 1776

                                                                        
Query: 59   tatttgtagttgatagtagtccgctcgctcacatgggtgtctaccaagggtactccgacc 118
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1775 tatttgtagttgatagtagtccgctcgctcacatgggtgtctaccaagggtactccgacc 1716

                                                                        
Query: 119  ataagattgtcacctcgaattcagcatcattgacaccaacaagacgtcctgtatggaggc 178
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1715 ataagattgtcacctcgaattcagcatcattgacaccaacaagacgtcctgtatggaggc 1656

                                                                        
Query: 179  cgtcgatggcagttttgaactcaagctcgcctctaacaatttcatctccggatccaccat 238
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1655 cgtcgatggcagttttgaactcaagctcgcctctaacaatttcatctccggatccaccat 1596

                                                                        
Query: 239  gacgaatgtcaagctcaatcgtgagcggcatgtgcagcggcacggcaagcgcatgcctcg 298
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1595 gacgaatgtcaagctcaatcgtgagcggcatgtgcagcggcacggcaagcgcatgcctcg 1536

                                                                        
Query: 299  ccaaggggaccagctccccaggtcgcacgcgcactccagcggcctcgttgtagaagagca 358
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1535 ccaaggggaccagctccccaggtcgcacgcgcactccagcggcctcgttgtagaagagca 1476

                                                                        
Query: 359  cacagccgaaatcgaacagcttgctgcgagcaacgatcctgccgacgagaaccacttcgt 418
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1475 cacagccgaaatcgaacagcttgctgcgagcaacgatcctgccgacgagaaccacttcgt 1416

                                                                        
Query: 419  ctcgggactgcaggccagcaagcttcacatcgacccggccttggacgccgttgcttagaa 478
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1415 ctcgggactgcaggccagcaagcttcacatcgacccggccttggacgccgttgcttagaa 1356

                                                                        
Query: 479  ctgcgtagatcacctccgcggggccgcagcgtgtgaggacagtctctgatatggccttat 538
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1355 ctgcgtagatcacctccgcggggccgcagcgtgtgaggacagtctctgatatggccttat 1296

                                                                        
Query: 539  tatagttggagaagtcgccgccaatggcgtcgcacactatcctcccggtgttcttttcat 598
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1295 tatagttggagaagtcgccgccaatggcgtcgcacactatcctcccggtgttcttttcat 1236

                               
Query: 599  cctnctcctcgtcggcttg 617
            ||| |||||||||||||||
Sbjct: 1235 cctcctcctcgtcggcttg 1217

>emb|AJ234729.1|HVU234729 Hordeum vulgare genomic DNA fragment; clone MWG2037.uni
          Length = 328

 Score =  159 bits (80), Expect = 1e-35
 Identities = 157/181 (86%), Gaps = 4/181 (2%)
 Strand = Plus / Plus

                                                                       
Query: 438 aagcttcacatcgacccggccttggacgccgttgcttagaactgcgtagatcacctccgc 497
           ||||||||| |||||||||||||||| ||| |||||||| || |||||||||||||||||
Sbjct: 7   aagcttcacgtcgacccggccttggatgccattgcttaggacggcgtagatcacctccgc 66

                                                                       
Query: 498 ggggccgcagcgtgtgagg-acagtctctgatatggccttattatagttggagaagtcgc 556
           ||||||  ||| ||||  | |||||||| ||||||||| | || ||||| ||||||||||
Sbjct: 67  ggggccatagcctgtgccgtacagtctccgatatggccctgttgtagttagagaagtcgc 126

                                                                       
Query: 557 cgccaatggcgtcgcacactatcctcccggtgttcttttcatcctnctcctcgtcggctt 616
           ||||||||| |||||| ||||||||| ||||||||   || |||| ||||||||||||||
Sbjct: 127 cgccaatggtgtcgcagactatcctcgcggtgttc---tcttcctcctcctcgtcggctt 183

            
Query: 617 g 617
           |
Sbjct: 184 g 184

>gb|BT017846.1| Zea mays clone EL01N0510E02.c mRNA sequence
          Length = 1034

 Score =  117 bits (59), Expect = 4e-23
 Identities = 136/161 (84%), Gaps = 3/161 (1%)
 Strand = Plus / Minus

                                                                       
Query: 246 gtcaagctcaatcgtgagcggcatgtgcagcggcacggcaagcgcatgcctcgccaaggg 305
           ||||||||||||||| ||||||||||||||||||||||| || || | |||||||||  |
Sbjct: 706 gtcaagctcaatcgtcagcggcatgtgcagcggcacggcgagtgcttccctcgccaactg 647

                                                                       
Query: 306 gaccagctccccaggtcgcacgcgcactcca---gcggcctcgttgtagaagagcacaca 362
            |||||| |||| |||||||||  |||||||    |  |||| |||||||||||||| ||
Sbjct: 646 aaccagcccccccggtcgcacgttcactccattgtcaccctctttgtagaagagcacgca 587

                                                    
Query: 363 gccgaaatcgaacagcttgctgcgagcaacgatcctgccga 403
           ||| |  || |||||||||||||||||||||||||| ||||
Sbjct: 586 gccaacgtcaaacagcttgctgcgagcaacgatcctcccga 546



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 112/137 (81%)
 Strand = Plus / Minus

                                                                       
Query: 449 cgacccggccttggacgccgttgcttagaactgcgtagatcacctccgcggggccgcagc 508
           ||||||||||||||||||||||||| || || || |||||||| || || |||||  |||
Sbjct: 485 cgacccggccttggacgccgttgctcaggacggcatagatcacttcagcagggccatagc 426

                                                                       
Query: 509 gtgtgaggacagtctctgatatggccttattatagttggagaagtcgccgccaatggcgt 568
             ||  ||||||||||   ||||||| | || |||||||||||||| ||||| |||  ||
Sbjct: 425 ccgtttggacagtctcgactatggccctgttgtagttggagaagtctccgccgatgcagt 366

                            
Query: 569 cgcacactatcctcccg 585
           |||| | ||||||||||
Sbjct: 365 cgcagattatcctcccg 349

>gb|AY109619.1| Zea mays CL9605_1 mRNA sequence
          Length = 1251

 Score =  117 bits (59), Expect = 4e-23
 Identities = 241/302 (79%), Gaps = 6/302 (1%)
 Strand = Plus / Plus

                                                                       
Query: 100 taccaagggtactccgaccataagattgtcacctcgaattcagcatcattgacaccaaca 159
           ||||||||||||| ||||||| | |||| ||| || ||||||||  ||||  | ||||||
Sbjct: 169 taccaagggtactgcgaccatgaaattgccacttccaattcagcgccattttctccaaca 228

                                                                       
Query: 160 agacgtcctgtatggaggccgtcgatggcagttttgaactcaagctcgcctctaacaatt 219
           || ||| | || ||  |||||| | | ||||  |||||||||||  | |||| |||||||
Sbjct: 229 agtcgttccgtgtgctggccgttggtcgcaggattgaactcaaggacccctccaacaatt 288

                                                                       
Query: 220 tcatctccggatccaccatgacgaatgtcaagctcaatcgtgagcggcatgtgcagcggc 279
           ||||| |||||   ||   || | | ||||||||||||||| ||||||||||||||||||
Sbjct: 289 tcatcgccgga---acagcgatgcaggtcaagctcaatcgtcagcggcatgtgcagcggc 345

                                                                       
Query: 280 acggcaagcgcatgcctcgccaaggggaccagctccccaggtcgcacgcgcactcca--- 336
           ||||| ||||| | |||||||||  | | |||||     |||||||||  |||||||   
Sbjct: 346 acggcgagcgcttccctcgccaactgaatcagctnnnnnggtcgcacgttcactccattg 405

                                                                       
Query: 337 gcggcctcgttgtagaagagcacacagccgaaatcgaacagcttgctgcgagcaacgatc 396
            |  |||| |||||||||||||| |||||||  |||||||||||||||||||||||||||
Sbjct: 406 tcaccctctttgtagaagagcacgcagccgacgtcgaacagcttgctgcgagcaacgatc 465

             
Query: 397 ct 398
           ||
Sbjct: 466 ct 467



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 113/137 (82%)
 Strand = Plus / Plus

                                                                       
Query: 449 cgacccggccttggacgccgttgcttagaactgcgtagatcacctccgcggggccgcagc 508
           ||||||||||||||||||||||||| || || || |||||||| || ||||||||  |||
Sbjct: 533 cgacccggccttggacgccgttgctcaggacggcatagatcacttcagcggggccatagc 592

                                                                       
Query: 509 gtgtgaggacagtctctgatatggccttattatagttggagaagtcgccgccaatggcgt 568
             ||  ||||||||||   ||||||| | || ||||||||||||||| |||| |||  ||
Sbjct: 593 ccgtttggacagtctcgactatggccctgttgtagttggagaagtcgtcgccgatgcagt 652

                            
Query: 569 cgcacactatcctcccg 585
           |||| | ||||||||||
Sbjct: 653 cgcagagtatcctcccg 669

>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 269     tgtgcagcggcacggcaagcgc 290
               ||||||||||||||||||||||
Sbjct: 1043253 tgtgcagcggcacggcaagcgc 1043232

>gb|AY135660.1| Aquifex pyrophilus hydrogenase small subunit (mbhS1) gene, partial
            cds; and hypothetical protein, phosphatidate
            cytidylytransferase (cds), undecaprenyl pyrophosphate
            (yaes), hypothetical protein,
            3-deoxy-D-manno-2-octulosonate-8-phosphate synthase
            (kdsA), molybdenum transport system permease (modB),
            riboflavin synthase beta subunit (ribH), transcription
            termination factor (nusB), hypothetical protein, NADH
            dehydrogenase (nuo), cytochrome c peroxidase (ccpR), heat
            shock protein 70 (dnaK), and hypothetical protein genes,
            complete cds
          Length = 12698

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 400  ccgacgagaaccacttcgtct 420
            |||||||||||||||||||||
Sbjct: 9770 ccgacgagaaccacttcgtct 9750

>emb|AJ005800.1|APH5800 Aquifex pyrophilus dnaK gene, partial
          Length = 1820

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 400  ccgacgagaaccacttcgtct 420
            |||||||||||||||||||||
Sbjct: 1031 ccgacgagaaccacttcgtct 1011

>ref|XM_631318.1| Dictyostelium discoideum ADP-ribosylation factor-like protein
           (DDB0229377), partial mRNA
          Length = 588

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 59  tatttgtagttgatagtagt 78
           ||||||||||||||||||||
Sbjct: 203 tatttgtagttgatagtagt 222

>gb|AE017140.1| Yersinia pestis biovar Medievalis str. 91001 section 14 of 16 of the
              complete genome
          Length = 290393

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 251    gctcaatcgtgagcggcatg 270
              ||||||||||||||||||||
Sbjct: 215761 gctcaatcgtgagcggcatg 215780

>gb|AC140279.4| Mus musculus BAC clone RP23-338N10 from chromosome 16, complete sequence
          Length = 211002

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 306    gaccagctccccaggtcgca 325
              ||||||||||||||||||||
Sbjct: 153238 gaccagctccccaggtcgca 153219

>gb|AC129718.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0088I06,
              complete sequence
          Length = 187651

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 345    gttgtagaagagcacacagc 364
              ||||||||||||||||||||
Sbjct: 159141 gttgtagaagagcacacagc 159160

>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome
          Length = 6397126

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 272     gcagcggcacggcaagcgcatgcc 295
               ||||||||||||||||||| ||||
Sbjct: 2556779 gcagcggcacggcaagcgcgtgcc 2556802

>gb|AE009952.1| Yersinia pestis KIM, complete genome
          Length = 4600755

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 251     gctcaatcgtgagcggcatg 270
               ||||||||||||||||||||
Sbjct: 3650813 gctcaatcgtgagcggcatg 3650794

>gb|AC122509.2| Mus musculus BAC clone RP24-443G20 from chromosome 16, complete
             sequence
          Length = 178757

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 306   gaccagctccccaggtcgca 325
             ||||||||||||||||||||
Sbjct: 51098 gaccagctccccaggtcgca 51079

>emb|Y16952.3|AME16952 Amycolatopsis balhimycina biosynthetic gene cluster for balhimycin,
             strain DSM 5908
          Length = 66669

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 481   gcgtagatcacctccgcggggccg 504
             ||||||||||| ||||||||||||
Sbjct: 44592 gcgtagatcacgtccgcggggccg 44569

>emb|Y14649.1|RLDNAKJ Rhizobium leguminosarum dnaK gene and partial dnaJ gene
          Length = 2934

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 400  ccgacgagaaccacttcgtc 419
            ||||||||||||||||||||
Sbjct: 1236 ccgacgagaaccacttcgtc 1217

>emb|CR543861.1| Acinetobacter sp. ADP1 complete genome
          Length = 3598621

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 366    gaaatcgaacagcttgctgc 385
              ||||||||||||||||||||
Sbjct: 250392 gaaatcgaacagcttgctgc 250373

>emb|BX936398.1| Yersinia pseudotuberculosis IP32953 genome, complete sequence
          Length = 4744671

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 251     gctcaatcgtgagcggcatg 270
               ||||||||||||||||||||
Sbjct: 3768518 gctcaatcgtgagcggcatg 3768499

>emb|AJ414145.1| Yersinia pestis strain CO92 complete genome; segment 5/20
          Length = 208050

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 251    gctcaatcgtgagcggcatg 270
              ||||||||||||||||||||
Sbjct: 111744 gctcaatcgtgagcggcatg 111725

>gb|DQ311189.1| Bombyx mori heat shock protein 70 mRNA, complete cds
          Length = 2266

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 153  accaacaagacgtcctgtat 172
            ||||||||||||||||||||
Sbjct: 1270 accaacaagacgtcctgtat 1251

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 345      gttgtagaagagcacacagc 364
                ||||||||||||||||||||
Sbjct: 24090652 gttgtagaagagcacacagc 24090671

>gb|AC008744.6|AC008744 Homo sapiens chromosome 19 clone CTD-2561O20, complete sequence
          Length = 203200

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 425    actgcaggccagcaagcttc 444
              ||||||||||||||||||||
Sbjct: 104383 actgcaggccagcaagcttc 104364

>gb|AC092455.4| Homo sapiens BAC clone CTD-2017A21 from 2, complete sequence
          Length = 110837

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 18    ggaaagacacttatttttaa 37
             ||||||||||||||||||||
Sbjct: 17374 ggaaagacacttatttttaa 17355

>gb|AY752744.1| Rhizobium leguminosarum strain ATCC 10004 DnaK gene, complete cds
          Length = 1917

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 400  ccgacgagaaccacttcgtc 419
            ||||||||||||||||||||
Sbjct: 1007 ccgacgagaaccacttcgtc 988

>gb|AC169630.2| Mus musculus BAC clone RP23-465E13 from chromosome 16, complete
             sequence
          Length = 186404

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 306   gaccagctccccaggtcgca 325
             ||||||||||||||||||||
Sbjct: 35474 gaccagctccccaggtcgca 35455


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,671,746
Number of Sequences: 3902068
Number of extensions: 3671746
Number of successful extensions: 58653
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 58457
Number of HSP's gapped (non-prelim): 189
length of query: 617
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 594
effective length of database: 17,143,297,704
effective search space: 10183118836176
effective search space used: 10183118836176
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)