>ERA_STRCO (Q9RDF2) GTP-binding protein era homolog|
          Length = 317

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 9/56 (16%)
 Frame = -3

Query: 375 DPSSLLSKLCLMDQLG----YAEADILPRVASIGN-----ADILPPVAPQNPSLAP 235
           D  +L  +L  +DQLG     A A+I+P  A+        AD+L P+ P+ P+L P
Sbjct: 141 DSKTLAEQLIAIDQLGKELGIAWAEIVPVSATANQQVDLLADLLTPLLPEGPALYP 196

>TYSY_BACMO (Q9ANR7) Thymidylate synthase A (EC 2.1.1.45) (TS A) (TSase A)|
          Length = 279

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 6/62 (9%)
 Frame = +3

Query: 186 TSSKKDGSHLLSDWRKEEQEMG--FGEQLAEVYRHSRLKQLGEV----YQLRHNPIDPSG 347
           T   K G H+   W++E+  +G  +G QLA+  R+   +++ +V    +QL++NP     
Sbjct: 84  TELNKMGVHIWDQWKQEDGSIGHAYGFQLAKKNRNLNGEKVDQVDYLLHQLKNNPSSRRH 143

Query: 348 IT 353
           IT
Sbjct: 144 IT 145

>EBP2_ARATH (Q9LUJ5) Probable rRNA-processing protein EBP2 homolog|
          Length = 293

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +3

Query: 171 ERMK-RTSSKKDGSHLLSDWRKEEQEMGFGEQLAE 272
           ++MK R   KKD    +  WRK+ Q+ GF ++  E
Sbjct: 172 QKMKERAKEKKDNIESVKKWRKQRQQSGFSDKAGE 206

>ZBT38_HUMAN (Q8NAP3) Zinc finger and BTB domain-containing protein 38|
          Length = 1195

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 26/96 (27%), Positives = 41/96 (42%), Gaps = 11/96 (11%)
 Frame = +1

Query: 25   KHEQ*NL------CVLCNE-----DIYNLHSKLHALTKSYSILSNPQRENVSQPKKIHSK 171
            KHE+ +L      C  CN+     +   +H ++H   K Y      QR      K+ H +
Sbjct: 1055 KHERIHLGLKEFVCQYCNKAFTLNETLKIHERIHTGEKRYHCQFCFQRFLYLSTKRNHEQ 1114

Query: 172  KG*REHPVKKMARTSCPIGAKRSKRWVLGSNWRKYI 279
            +  REH  K  A   CP   K +    LG + +K++
Sbjct: 1115 RHIREHNGKGYACFQCPKICKTAA--ALGMHQKKHL 1148

>YEHI_ECOLI (P33346) Hypothetical protein yehI|
          Length = 1210

 Score = 29.6 bits (65), Expect = 3.7
 Identities = 32/118 (27%), Positives = 42/118 (35%), Gaps = 5/118 (4%)
 Frame = -2

Query: 451 GWDNVSAADIMALPVWQFELYSPIPRSLVAPLQVMPDGSIGLCRS*YTSPSCFNRECRYT 272
           G DN +  +I+  P W+ +     PR  +APL++ P          Y  P    R     
Sbjct: 419 GTDNSNLPEILVSPPWRSKKKMTAPRLDLAPLELTPQV--------YWQPGEQERLAATE 470

Query: 271 SASCSPKPISCSSLRQSDKRC---EPSFLLDVLFILSYY--GFF*VARRSLVVDWKEY 113
            A           + Q   R    E  F  DV   L+Y   G    AR SL V W  Y
Sbjct: 471 PARYFSTESLAQRMEQKSGRVVLQELGFGDDVWLFLNYILPGKLDAARNSLFVQWHYY 528

>TRUNK_DROME (Q24155) Protein trunk precursor|
          Length = 226

 Score = 26.6 bits (57), Expect(2) = 5.3
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = -2

Query: 307 SPSCFNRECRYTSASCSPKPISCSSLRQSDKRC 209
           S  C  R+C Y   +C PK  +   LR+    C
Sbjct: 154 SIECIARKCWYDHFNCKPKSFTIKVLRRKTGSC 186



 Score = 21.2 bits (43), Expect(2) = 5.3
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1

Query: 338 INWVMPKLIYFPELLQS 288
           INW+   L YFP  ++S
Sbjct: 138 INWIDLGLNYFPRYIRS 154

>RNRH_RHINI (P08056) Ribonuclease Rh precursor (EC 3.1.27.1) (RNase Rh)|
          Length = 238

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = -2

Query: 271 SASCSPKPISCSSLRQSDKRCEPSFLLDVL 182
           ++SCS   +SCS+   SD  C P + L VL
Sbjct: 16  ASSCSSTALSCSNSANSDTCCSPEYGLVVL 45

>LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12)|
          Length = 861

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 10/73 (13%)
 Frame = +3

Query: 195  KKDGSHLLSDWRKEEQEMGFGEQLAEVYRHSRLKQLGEVYQLRHNPID-------PS--- 344
            ++D  +  SD R  E    FG +LAE+ +    +   E  + RH P++       PS   
Sbjct: 789  ERDNPNWTSDKRALEAFKKFGNKLAEIEKKLTQRNNDEKLRNRHGPVEMPYTLLYPSSKE 848

Query: 345  GITWRGATRDLGM 383
            G+T+RG    + +
Sbjct: 849  GLTFRGIPNSISI 861

>CKX1_ARATH (O22213) Cytokinin dehydrogenase 1 precursor (EC 1.5.99.12)|
           (Cytokinin oxidase 1) (CKO 1) (AtCKX1)
          Length = 575

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = -3

Query: 384 PFPDPSSLLSKLCLMDQLGYAEADILPRVA-SIGNADILPPVAPQNP 247
           P  +PS + S L  +D  GY   D +  VA   GN   LPP+A  +P
Sbjct: 48  PSSNPSDIRSSLVSLDLEGYISFDDVHNVAKDFGNRYQLPPLAILHP 94

>OPSUV_CARAU (Q90309) Ultraviolet-sensitive opsin (Ultraviolet cone|
           photoreceptor pigment)
          Length = 336

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = -3

Query: 423 SWRYQFGSLSYIHPFPDP 370
           +W YQFG+LS I PF  P
Sbjct: 3   AWTYQFGNLSKISPFEGP 20

>ARSF_HUMAN (P54793) Arylsulfatase F precursor (EC 3.1.6.-) (ASF)|
          Length = 590

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 15/49 (30%), Positives = 21/49 (42%)
 Frame = -3

Query: 315 DILPRVASIGNADILPPVAPQNPSLAPLCANRTRGASHLFYWMFSSSFL 169
           DILP VAS+    +          L PL     R + H F + +  S+L
Sbjct: 405 DILPTVASVSGGSLPQDRVIDGRDLMPLLQGNVRHSEHEFLFHYCGSYL 453

>SNX22_HUMAN (Q96L94) Sorting nexin-22|
          Length = 193

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
 Frame = +3

Query: 207 SHLLSDWRK---EEQEMGFGEQLAEV-YRHSRL-KQLGEVYQLRHNPIDPSGITWRGATR 371
           S  L +WR    E++  G    +  + Y +  + K+L E  +LRH P DP    W G  R
Sbjct: 65  SKRLPNWRTRGLEQRRQGLEAYIQGILYLNQEVPKELLEFLRLRHFPTDPKASNW-GTLR 123

Query: 372 DLGMGEYSS 398
           +   G+ SS
Sbjct: 124 EFLPGDSSS 132

>PRI1_DROME (Q24317) DNA primase small subunit (EC 2.7.7.-) (DNA primase 50 kDa|
           subunit) (DNA polymerase subunit A) (dPRI50)
          Length = 438

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = -1

Query: 311 YFPELLQSGMPIYFRQLLP 255
           Y PE+LQ  +P+Y+R+L P
Sbjct: 23  YNPEVLQDMLPVYYRRLFP 41

>HIS6_STAEQ (Q5HKP2) Imidazole glycerol phosphate synthase subunit hisF (EC|
           4.1.3.-) (IGP synthase cyclase subunit) (IGP synthase
           subunit hisF) (ImGP synthase subunit hisF) (IGPS subunit
           hisF)
          Length = 252

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 6/48 (12%)
 Frame = +3

Query: 222 DWRKEEQEMGFGEQLAEVYRHSRLKQ------LGEVYQLRHNPIDPSG 347
           DW +E + +G GE L     H  +KQ      L ++ QL + PI  SG
Sbjct: 157 DWVQEVEHLGAGELLITSMHHDGMKQGFDIEHLAKIKQLVNIPIIASG 204

>NANA_STRR6 (P62576) Sialidase A precursor (EC 3.2.1.18) (Neuraminidase A)|
          Length = 1035

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 13/36 (36%), Positives = 23/36 (63%)
 Frame = +3

Query: 285 SRLKQLGEVYQLRHNPIDPSGITWRGATRDLGMGEY 392
           +R+++ GE+  L+HNPI      +  + ++LG GEY
Sbjct: 729 ARVEENGELTWLKHNPIQKGEFAY-NSLQELGNGEY 763

>NANA_STRPN (P62575) Sialidase A precursor (EC 3.2.1.18) (Neuraminidase A)|
          Length = 1035

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 13/36 (36%), Positives = 23/36 (63%)
 Frame = +3

Query: 285 SRLKQLGEVYQLRHNPIDPSGITWRGATRDLGMGEY 392
           +R+++ GE+  L+HNPI      +  + ++LG GEY
Sbjct: 729 ARVEENGELTWLKHNPIQKGEFAY-NSLQELGNGEY 763

>HIS8_SYNP6 (Q5N4R3) Histidinol-phosphate aminotransferase (EC 2.6.1.9)|
           (Imidazole acetol-phosphate transaminase)
          Length = 373

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 15/54 (27%), Positives = 27/54 (50%)
 Frame = +2

Query: 11  FYNRTSTSNKIYVYCAMKTFTTFIQNCTP*LRVTVFFPIHNERTSRNLKKSIVR 172
           F    S+S    +   +K   T +++    LR+T+  P  NERT  +L+ +I +
Sbjct: 314 FLKTQSSSQTAALAAQLKAQGTLVRHTADGLRITIGSPAENERTLAHLQTAITQ 367

>KI18A_MOUSE (Q91WD7) Kinesin family member 18A|
          Length = 886

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
 Frame = +1

Query: 85  KLHALTKSYSILSNPQRENVSQPKKIHSKKG*REHPVKKMARTSCPIGAKR---SKRWVL 255
           K +AL  SY    + Q E +    K+      R+H ++K+   SC +  K+   SK++  
Sbjct: 448 KANALKSSYHQQCHKQIEMMCSEDKVEKATCKRDHRLEKLKTNSCFLEKKKEEVSKQFDE 507

Query: 256 GSNW 267
            +NW
Sbjct: 508 NTNW 511

>NO44_SOYBN (P04672) Nodulin 44 precursor (N-44) (Nodulin E27)|
          Length = 360

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = -3

Query: 351 LCLMDQLGYAEADILPRVASIGNADILPPVAPQNP 247
           LCL+D +     D    V ++G+  ILPP  P+ P
Sbjct: 72  LCLLDSMERCLLDHQTNVGTLGDLIILPPFPPRPP 106

>HPS6_MOUSE (Q8BLY7) Hermansky-Pudlak syndrome 6 protein homolog (Ruby-eye|
           protein) (Ru)
          Length = 805

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +2

Query: 200 RWLAPLVRLAQRGARDGFWGATGGSISAF 286
           +WL P V+LAQ+    G WGA G S+  +
Sbjct: 578 QWLPPFVKLAQQQGGPG-WGAEGPSLPLY 605


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,659,813
Number of Sequences: 219361
Number of extensions: 1622293
Number of successful extensions: 5177
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 5026
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5176
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2793557952
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)