ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags30f10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DQ139266.1| Triticum aestivum gamma tocopherol methyltransfer... 805 0.0
2gb|BT009496.1| Triticum aestivum clone wr1.pk0077.f1:fis, full i... 775 0.0
3ref|XM_467331.1| Oryza sativa (japonica cultivar-group), mRNA 278 2e-71
4ref|XM_506924.1| PREDICTED Oryza sativa (japonica cultivar-group... 278 2e-71
5gb|DQ456878.1| Oryza sativa gamma-tocopherol methyltransferase (... 278 2e-71
6dbj|AK071763.1| Oryza sativa (japonica cultivar-group) cDNA clon... 278 2e-71
7dbj|AK061746.1| Oryza sativa (japonica cultivar-group) cDNA clon... 278 2e-71
8gb|DQ456879.1| Zea mays gamma-tocopherol methyltransferase (TMT)... 182 1e-42
9gb|AY109799.1| Zea mays CL364_1 mRNA sequence 174 2e-40
10dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 143 8e-31
11dbj|AP003994.3| Oryza sativa (japonica cultivar-group) genomic D... 143 8e-31
12gb|DQ456877.1| Solanum tuberosum gamma-tocopherol methyltransfer... 74 6e-10
13gb|DQ456876.1| Lycopersicon esculentum gamma-tocopherol methyltr... 74 6e-10
14gb|DQ456880.1| Gossypium hirsutum gamma-tocopherol methyltransfe... 66 2e-07
15gb|AF213481.1|AF213481 Perilla frutescens gamma-tocopherol methy... 66 2e-07
16gb|AF527809.1| Sorghum bicolor clone BAC SB_BBc0234M12 php200725... 54 6e-04
17gb|DQ229834.1| Helianthus annuus cultivar RHA801 gamma-tocophero... 52 0.002
18gb|DQ229833.1| Helianthus annuus cultivar LG24 gamma-tocopherol ... 52 0.002
19gb|AC169370.4| Sorghum bicolor clone SB_BBc0011I20, complete seq... 48 0.037
20gb|AY960126.1| Glycine max gamma-tocopherol methyltransferase mR... 44 0.57
21gb|DQ229832.1| Helianthus annuus cultivar RHA801 gamma-tocophero... 44 0.57
22gb|DQ229831.1| Helianthus annuus cultivar LG24 gamma-tocopherol ... 44 0.57
23gb|DQ229830.1| Helianthus annuus cultivar RHA280 gamma-tocophero... 44 0.57
24gb|DQ229829.1| Helianthus annuus cultivar R112 gamma-tocopherol ... 44 0.57
25gb|DQ229828.1| Helianthus annuus cultivar NMS373 gamma-tocophero... 44 0.57
26ref|XM_472495.1| Oryza sativa (japonica cultivar-group), predic... 42 2.3
27emb|AL606632.5| Oryza sativa genomic DNA, chromosome 4, BAC clon... 42 2.3
28gb|AC162801.2| Mus musculus BAC clone RP24-65E6 from chromosome ... 42 2.3
29dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
30emb|BX571681.7| Zebrafish DNA sequence from clone DKEY-73N10 in ... 42 2.3
31dbj|AK070730.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.3
32ref|XM_631468.1| Dictyostelium discoideum hypothetical protein (... 40 8.9
33gb|AC133880.7| Mus musculus chromosome 15, clone RP24-142B13, co... 40 8.9
34gb|AC149481.1| Populus trichocarpa clone Pop1-16J18, complete se... 40 8.9
35gb|AC147091.2| Pan troglodytes BAC clone RP43-57O16 from 7, comp... 40 8.9
36gb|AC002124.2| Homo sapiens BAC clone CTB-180O1 from 7, complete... 40 8.9
37gb|AC124385.3| Mus musculus BAC clone RP24-421A2 from chromosome... 40 8.9
38gb|AC121888.3| Mus musculus BAC clone RP24-142M5 from chromosome... 40 8.9
39gb|AC145920.1| Pan troglodytes BAC clone RP43-10C15 from 7, comp... 40 8.9
40emb|AL589685.17| Human DNA sequence from clone RP11-443G18 on ch... 40 8.9
41emb|AJ235270.1|RPXX01 Rickettsia prowazekii strain Madrid E, com... 40 8.9
42gb|AC154210.2| Mus musculus BAC clone RP24-113C3 from chromosome... 40 8.9
43gb|AC095029.3| Homo sapiens chromosome 3 clone RP11-208J17, comp... 40 8.9
44gb|AC107624.1| Homo sapiens chromosome 3 clone RP11-744H21, comp... 40 8.9
45gb|AC024565.6| Homo sapiens chromosome 5 clone CTD-2104P22, comp... 40 8.9
46gb|AC092181.9| Homo sapiens 3 BAC RP11-735O9 (Roswell Park Cance... 40 8.9
47gb|AC127285.4| Mus musculus BAC clone RP23-336P20 from chromosom... 40 8.9
48emb|Z82318.1|RPZ82318 R.prowazekii genomic DNA fragment (clone A... 40 8.9
49emb|CT010428.13| Mouse DNA sequence from clone RP23-304G18 on ch... 40 8.9
50emb|AL773523.4| Mouse DNA sequence from clone RP23-186B18 on chr... 40 8.9
51emb|AL669901.26| Mouse DNA sequence from clone RP23-35N5 on chro... 40 8.9
52emb|AL591952.9| Mouse DNA sequence from clone RP23-25N17 on chro... 40 8.9 
>gb|DQ139266.1| Triticum aestivum gamma tocopherol methyltransferase mRNA, complete
            cds
          Length = 1288

 Score =  805 bits (406), Expect = 0.0
 Identities = 521/557 (93%), Gaps = 3/557 (0%)
 Strand = Plus / Minus

                                                                        
Query: 100  atgaatctgaagagaattttgctttagaaaccacttttcatatggcacttgcagttgcag 159
            |||||||||| |||||||||||||||| ||||| || ||||||||||||| |||||||||
Sbjct: 1267 atgaatctgaggagaattttgctttaggaacca-ttctcatatggcacttccagttgcag 1209

                                                                        
Query: 160  gtacataggcatggtaacacgaaaattttcagctacaaggcggcagcacgctgagtgtac 219
             |||| ||||| |||||||||||| | ||||||||||||||| ||||| || |||| || 
Sbjct: 1208 atacagaggcacggtaacacgaaattattcagctacaaggcgacagcaagccgagtctat 1149

                                                                        
Query: 220  ctcaatcacatgggttctattctacacta--ggcgatgcggtctcagcttctccttctgt 277
              ||||||||||||||||||||||||||   |||||||||| ||||| |||||||||| |
Sbjct: 1148 tccaatcacatgggttctattctacactctgggcgatgcggcctcaggttctccttctat 1089

                                                                        
Query: 278  gactgcttggggtttgcggcaggtgatgatggtgaacttgatcaggcctttcttgtagcc 337
            | |||||||||||||| |||||||||||||| ||||||| || |||||||||||||||||
Sbjct: 1088 ggctgcttggggtttgtggcaggtgatgatgctgaacttaatgaggcctttcttgtagcc 1029

                                                                        
Query: 338  ttggatcatgagaggcatcaccagtgctccctttatcgtcttccatccactccttagtag 397
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1028 ttggatcatgagaggcatcaccagtgctccctttatcgtcttccatccactccttagtag 969

                                                                        
Query: 398  agaagtgaggcctttccatgtcagtgctgattggatgacagcaggccaaaacggggccac 457
            |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 968  agaagtgaggcctttccatgtcagtgctgattggatgacagcaggccagaacggggccac 909

                                                                        
Query: 458  gttttcagaccagtcagccgttttgatatcctcaagagacaatgactcggcaatcttgac 517
            ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 908  gttttcagaccagtcggccgttttgatatcctcaagagacaatgactcggcaatcttgac 849

                                                                        
Query: 518  ataatccgagggcgagcaccaatccgggaggtaatatgcatcacaaatctttttcaaaag 577
            |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 848  ataatccgagggcgagcaccaatctgggaggtaatatgcatcacaaatctttttcaaaag 789

                                                                        
Query: 578  attcagctcgtcaggtttcagtgagtcctcagatagcgcaaggttcctatggcaccaggt 637
            |||||||||||||||||||||||||||||| ||  |||| ||||||||||||||||||||
Sbjct: 788  attcagctcgtcaggtttcagtgagtcctccgacggcgcgaggttcctatggcaccaggt 729

                             
Query: 638  cacgatgatgattgttg 654
            |||||||||||| ||||
Sbjct: 728  cacgatgatgatagttg 712
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>gb|BT009496.1| Triticum aestivum clone wr1.pk0077.f1:fis, full insert mRNA sequence
          Length = 1024

 Score =  775 bits (391), Expect = 0.0
 Identities = 503/539 (93%), Gaps = 1/539 (0%)
 Strand = Plus / Minus

                                                                        
Query: 116  ttttgctttagaaaccacttttcatatggcacttgcagttgcaggtacataggcatggta 175
            ||||||||||| ||||||||| | |||| ||||| ||||||||| || | ||||| ||||
Sbjct: 1004 ttttgctttaggaaccactttcc-tatgccacttccagttgcagatagagaggcacggta 946

                                                                        
Query: 176  acacgaaaattttcagctacaaggcggcagcacgctgagtgtacctcaatcacatgggtt 235
            |||| ||| | ||||||||| ||||| ||||| || |||| ||   ||||||||||||||
Sbjct: 945  acacaaaattattcagctacgaggcgacagcaagccgagtctattccaatcacatgggtt 886

                                                                        
Query: 236  ctattctacactaggcgatgcggtctcagcttctccttctgtgactgcttggggtttgcg 295
            |||||||||||| |||||||||| ||||| |||||||||| || ||||||||||||||||
Sbjct: 885  ctattctacactgggcgatgcggcctcaggttctccttctatggctgcttggggtttgcg 826

                                                                        
Query: 296  gcaggtgatgatggtgaacttgatcaggcctttcttgtagccttggatcatgagaggcat 355
            ||||||||||||| ||||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 825  gcaggtgatgatgctgaacttaatgaggcctttcttgtagccttggatcatgagaggcat 766

                                                                        
Query: 356  caccagtgctccctttatcgtcttccatccactccttagtagagaagtgaggcctttcca 415
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 765  caccagtgctccctttatcgtcttccatccactccttagtagagaagtgaggcctttcca 706

                                                                        
Query: 416  tgtcagtgctgattggatgacagcaggccaaaacggggccacgttttcagaccagtcagc 475
            |||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||
Sbjct: 705  tgtcagtgctgattggatgacagcaggccagaacggggccacgttttctgaccagtcggc 646

                                                                        
Query: 476  cgttttgatatcctcaagagacaatgactcggcaatcttgacataatccgagggcgagca 535
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645  cgttttgatatcctcaagagacaatgactcggcaatcttgacataatccgagggcgagca 586

                                                                        
Query: 536  ccaatccgggaggtaatatgcatcacaaatctttttcaaaagattcagctcgtcaggttt 595
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585  ccaatccgggaggtaatatgcatcacaaatctttttcaaaagattcagctcgtcaggttt 526

                                                                       
Query: 596  cagtgagtcctcagatagcgcaaggttcctatggcaccaggtcacgatgatgattgttg 654
            |||||||||||| ||  |||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 525  cagtgagtcctccgacggcgcgaggttcctatggcaccaggtcacgatgatgatagttg 467
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>ref|XM_467331.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1301

 Score =  278 bits (140), Expect = 2e-71
 Identities = 302/356 (84%)
 Strand = Plus / Minus

                                                                        
Query: 291  ttgcggcaggtgatgatggtgaacttgatcaggcctttcttgtagccttggatcatgaga 350
            ||||| ||||||||||||||||| ||||| || ||||||||||| |||| |||||| |||
Sbjct: 1090 ttgcgacaggtgatgatggtgaatttgatgagccctttcttgtatccttcgatcatcaga 1031

                                                                        
Query: 351  ggcatcaccagtgctccctttatcgtcttccatccactccttagtagagaagtgaggcct 410
            |||||||||| ||| ||  ||||||||||||| ||||| ||||| |||||||| |  |||
Sbjct: 1030 ggcatcaccattgcacctcttatcgtcttccacccacttcttagcagagaagttaaacct 971

                                                                        
Query: 411  ttccatgtcagtgctgattggatgacagcaggccaaaacggggccacgttttcagaccag 470
            |||||||||| ||||||||  || || |||||||| || ||||| ||||| || ||||| 
Sbjct: 970  ttccatgtcaatgctgattttataaccgcaggccagaatggggcgacgttctctgaccaa 911

                                                                        
Query: 471  tcagccgttttgatatcctcaagagacaatgactcggcaatcttgacataatccgagggc 530
            ||||| ||  | |||||||||||||||| |||||||||||| ||||||||||| || || 
Sbjct: 910  tcagctgtccttatatcctcaagagacagtgactcggcaattttgacataatcagaagga 851

                                                                        
Query: 531  gagcaccaatccgggaggtaatatgcatcacaaatctttttcaaaagattcagctcgtca 590
            |||||||| || ||||| ||||||||||| || ||| ||||||  ||||||||||| |||
Sbjct: 850  gagcaccagtctgggagataatatgcatcgcatatccttttcaggagattcagctcatca 791

                                                                    
Query: 591  ggtttcagtgagtcctcagatagcgcaaggttcctatggcaccaggtcacgatgat 646
            |||||||| || || || ||| || | ||||||||||||||||||||||| |||||
Sbjct: 790  ggtttcagggactcttcggatggctcgaggttcctatggcaccaggtcacaatgat 735
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>ref|XM_506924.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1111_E07.25 mRNA
          Length = 1432

 Score =  278 bits (140), Expect = 2e-71
 Identities = 302/356 (84%)
 Strand = Plus / Minus

                                                                        
Query: 291  ttgcggcaggtgatgatggtgaacttgatcaggcctttcttgtagccttggatcatgaga 350
            ||||| ||||||||||||||||| ||||| || ||||||||||| |||| |||||| |||
Sbjct: 1091 ttgcgacaggtgatgatggtgaatttgatgagccctttcttgtatccttcgatcatcaga 1032

                                                                        
Query: 351  ggcatcaccagtgctccctttatcgtcttccatccactccttagtagagaagtgaggcct 410
            |||||||||| ||| ||  ||||||||||||| ||||| ||||| |||||||| |  |||
Sbjct: 1031 ggcatcaccattgcacctcttatcgtcttccacccacttcttagcagagaagttaaacct 972

                                                                        
Query: 411  ttccatgtcagtgctgattggatgacagcaggccaaaacggggccacgttttcagaccag 470
            |||||||||| ||||||||  || || |||||||| || ||||| ||||| || ||||| 
Sbjct: 971  ttccatgtcaatgctgattttataaccgcaggccagaatggggcgacgttctctgaccaa 912

                                                                        
Query: 471  tcagccgttttgatatcctcaagagacaatgactcggcaatcttgacataatccgagggc 530
            ||||| ||  | |||||||||||||||| |||||||||||| ||||||||||| || || 
Sbjct: 911  tcagctgtccttatatcctcaagagacagtgactcggcaattttgacataatcagaagga 852

                                                                        
Query: 531  gagcaccaatccgggaggtaatatgcatcacaaatctttttcaaaagattcagctcgtca 590
            |||||||| || ||||| ||||||||||| || ||| ||||||  ||||||||||| |||
Sbjct: 851  gagcaccagtctgggagataatatgcatcgcatatccttttcaggagattcagctcatca 792

                                                                    
Query: 591  ggtttcagtgagtcctcagatagcgcaaggttcctatggcaccaggtcacgatgat 646
            |||||||| || || || ||| || | ||||||||||||||||||||||| |||||
Sbjct: 791  ggtttcagggactcttcggatggctcgaggttcctatggcaccaggtcacaatgat 736
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>gb|DQ456878.1| Oryza sativa gamma-tocopherol methyltransferase (TMT) mRNA, complete
            cds
          Length = 1432

 Score =  278 bits (140), Expect = 2e-71
 Identities = 302/356 (84%)
 Strand = Plus / Minus

                                                                        
Query: 291  ttgcggcaggtgatgatggtgaacttgatcaggcctttcttgtagccttggatcatgaga 350
            ||||| ||||||||||||||||| ||||| || ||||||||||| |||| |||||| |||
Sbjct: 1091 ttgcgacaggtgatgatggtgaatttgatgagccctttcttgtatccttcgatcatcaga 1032

                                                                        
Query: 351  ggcatcaccagtgctccctttatcgtcttccatccactccttagtagagaagtgaggcct 410
            |||||||||| ||| ||  ||||||||||||| ||||| ||||| |||||||| |  |||
Sbjct: 1031 ggcatcaccattgcacctcttatcgtcttccacccacttcttagcagagaagttaaacct 972

                                                                        
Query: 411  ttccatgtcagtgctgattggatgacagcaggccaaaacggggccacgttttcagaccag 470
            |||||||||| ||||||||  || || |||||||| || ||||| ||||| || ||||| 
Sbjct: 971  ttccatgtcaatgctgattttataaccgcaggccagaatggggcgacgttctctgaccaa 912

                                                                        
Query: 471  tcagccgttttgatatcctcaagagacaatgactcggcaatcttgacataatccgagggc 530
            ||||| ||  | |||||||||||||||| |||||||||||| ||||||||||| || || 
Sbjct: 911  tcagctgtccttatatcctcaagagacagtgactcggcaattttgacataatcagaagga 852

                                                                        
Query: 531  gagcaccaatccgggaggtaatatgcatcacaaatctttttcaaaagattcagctcgtca 590
            |||||||| || ||||| ||||||||||| || ||| ||||||  ||||||||||| |||
Sbjct: 851  gagcaccagtctgggagataatatgcatcgcatatccttttcaggagattcagctcatca 792

                                                                    
Query: 591  ggtttcagtgagtcctcagatagcgcaaggttcctatggcaccaggtcacgatgat 646
            |||||||| || || || ||| || | ||||||||||||||||||||||| |||||
Sbjct: 791  ggtttcagggactcttcggatggctcgaggttcctatggcaccaggtcacaatgat 736
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>dbj|AK071763.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023110C23, full
            insert sequence
          Length = 1432

 Score =  278 bits (140), Expect = 2e-71
 Identities = 302/356 (84%)
 Strand = Plus / Minus

                                                                        
Query: 291  ttgcggcaggtgatgatggtgaacttgatcaggcctttcttgtagccttggatcatgaga 350
            ||||| ||||||||||||||||| ||||| || ||||||||||| |||| |||||| |||
Sbjct: 1091 ttgcgacaggtgatgatggtgaatttgatgagccctttcttgtatccttcgatcatcaga 1032

                                                                        
Query: 351  ggcatcaccagtgctccctttatcgtcttccatccactccttagtagagaagtgaggcct 410
            |||||||||| ||| ||  ||||||||||||| ||||| ||||| |||||||| |  |||
Sbjct: 1031 ggcatcaccattgcacctcttatcgtcttccacccacttcttagcagagaagttaaacct 972

                                                                        
Query: 411  ttccatgtcagtgctgattggatgacagcaggccaaaacggggccacgttttcagaccag 470
            |||||||||| ||||||||  || || |||||||| || ||||| ||||| || ||||| 
Sbjct: 971  ttccatgtcaatgctgattttataaccgcaggccagaatggggcgacgttctctgaccaa 912

                                                                        
Query: 471  tcagccgttttgatatcctcaagagacaatgactcggcaatcttgacataatccgagggc 530
            ||||| ||  | |||||||||||||||| |||||||||||| ||||||||||| || || 
Sbjct: 911  tcagctgtccttatatcctcaagagacagtgactcggcaattttgacataatcagaagga 852

                                                                        
Query: 531  gagcaccaatccgggaggtaatatgcatcacaaatctttttcaaaagattcagctcgtca 590
            |||||||| || ||||| ||||||||||| || ||| ||||||  ||||||||||| |||
Sbjct: 851  gagcaccagtctgggagataatatgcatcgcatatccttttcaggagattcagctcatca 792

                                                                    
Query: 591  ggtttcagtgagtcctcagatagcgcaaggttcctatggcaccaggtcacgatgat 646
            |||||||| || || || ||| || | ||||||||||||||||||||||| |||||
Sbjct: 791  ggtttcagggactcttcggatggctcgaggttcctatggcaccaggtcacaatgat 736
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>dbj|AK061746.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-F12, full
            insert sequence
          Length = 1301

 Score =  278 bits (140), Expect = 2e-71
 Identities = 302/356 (84%)
 Strand = Plus / Minus

                                                                        
Query: 291  ttgcggcaggtgatgatggtgaacttgatcaggcctttcttgtagccttggatcatgaga 350
            ||||| ||||||||||||||||| ||||| || ||||||||||| |||| |||||| |||
Sbjct: 1090 ttgcgacaggtgatgatggtgaatttgatgagccctttcttgtatccttcgatcatcaga 1031

                                                                        
Query: 351  ggcatcaccagtgctccctttatcgtcttccatccactccttagtagagaagtgaggcct 410
            |||||||||| ||| ||  ||||||||||||| ||||| ||||| |||||||| |  |||
Sbjct: 1030 ggcatcaccattgcacctcttatcgtcttccacccacttcttagcagagaagttaaacct 971

                                                                        
Query: 411  ttccatgtcagtgctgattggatgacagcaggccaaaacggggccacgttttcagaccag 470
            |||||||||| ||||||||  || || |||||||| || ||||| ||||| || ||||| 
Sbjct: 970  ttccatgtcaatgctgattttataaccgcaggccagaatggggcgacgttctctgaccaa 911

                                                                        
Query: 471  tcagccgttttgatatcctcaagagacaatgactcggcaatcttgacataatccgagggc 530
            ||||| ||  | |||||||||||||||| |||||||||||| ||||||||||| || || 
Sbjct: 910  tcagctgtccttatatcctcaagagacagtgactcggcaattttgacataatcagaagga 851

                                                                        
Query: 531  gagcaccaatccgggaggtaatatgcatcacaaatctttttcaaaagattcagctcgtca 590
            |||||||| || ||||| ||||||||||| || ||| ||||||  ||||||||||| |||
Sbjct: 850  gagcaccagtctgggagataatatgcatcgcatatccttttcaggagattcagctcatca 791

                                                                    
Query: 591  ggtttcagtgagtcctcagatagcgcaaggttcctatggcaccaggtcacgatgat 646
            |||||||| || || || ||| || | ||||||||||||||||||||||| |||||
Sbjct: 790  ggtttcagggactcttcggatggctcgaggttcctatggcaccaggtcacaatgat 735
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>gb|DQ456879.1| Zea mays gamma-tocopherol methyltransferase (TMT) mRNA, complete cds
          Length = 1310

 Score =  182 bits (92), Expect = 1e-42
 Identities = 218/260 (83%)
 Strand = Plus / Minus

                                                                        
Query: 291  ttgcggcaggtgatgatggtgaacttgatcaggcctttcttgtagccttggatcatgaga 350
            ||||| ||||||||||||||||| ||||| ||||| ||||||||||| |||||||| || 
Sbjct: 1112 ttgcgacaggtgatgatggtgaatttgatgaggcccttcttgtagccctggatcattagc 1053

                                                                        
Query: 351  ggcatcaccagtgctccctttatcgtcttccatccactccttagtagagaagtgaggcct 410
            ||||||||||  || ||  | ||||||||||||||  || | || ||||| |||| ||| 
Sbjct: 1052 ggcatcaccatcgcgcctctgatcgtcttccatccggtcgtcagcagagaggtgaagccc 993

                                                                        
Query: 411  ttccatgtcagtgctgattggatgacagcaggccaaaacggggccacgttttcagaccag 470
            |||||||| || |||||||  || || || |||||||||||||||||||| || ||||||
Sbjct: 992  ttccatgttagcgctgattttatcacggcgggccaaaacggggccacgttctccgaccag 933

                                                                        
Query: 471  tcagccgttttgatatcctcaagagacaatgactcggcaatcttgacataatccgagggc 530
            ||||| || ||||||||||| ||||||| ||||| |||||| || ||||| || || || 
Sbjct: 932  tcagctgtcttgatatcctcgagagacagtgacttggcaatgttcacatagtctgaaggt 873

                                
Query: 531  gagcaccaatccgggaggta 550
            |||||||| |||||||||||
Sbjct: 872  gagcaccagtccgggaggta 853



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                              
Query: 618 aggttcctatggcaccaggtcacgatgatgattgt 652
           ||||||||||||||||| ||||||||||| |||||
Sbjct: 785 aggttcctatggcaccatgtcacgatgattattgt 751
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>gb|AY109799.1| Zea mays CL364_1 mRNA sequence
          Length = 1304

 Score =  174 bits (88), Expect = 2e-40
 Identities = 217/260 (83%)
 Strand = Plus / Minus

                                                                        
Query: 291  ttgcggcaggtgatgatggtgaacttgatcaggcctttcttgtagccttggatcatgaga 350
            ||||| ||||||||||||||||| ||||| || || ||||||||||| |||||||| || 
Sbjct: 1094 ttgcgacaggtgatgatggtgaatttgatgagccccttcttgtagccctggatcattagc 1035

                                                                        
Query: 351  ggcatcaccagtgctccctttatcgtcttccatccactccttagtagagaagtgaggcct 410
            ||||||||||  || ||  | ||||||||||||||  || | || ||||| |||| ||| 
Sbjct: 1034 ggcatcaccatcgcgcctctgatcgtcttccatccggtcgtcagcagagaggtgaagccc 975

                                                                        
Query: 411  ttccatgtcagtgctgattggatgacagcaggccaaaacggggccacgttttcagaccag 470
            |||||||| || |||||||  || || || |||||||||||||||||||| || ||||||
Sbjct: 974  ttccatgttagcgctgattttatcacggcgggccaaaacggggccacgttctccgaccag 915

                                                                        
Query: 471  tcagccgttttgatatcctcaagagacaatgactcggcaatcttgacataatccgagggc 530
            ||||| || ||||||||||| ||||||| ||||| |||||| || ||||| || || || 
Sbjct: 914  tcagctgtcttgatatcctcgagagacagtgacttggcaatgttcacatagtctgaaggt 855

                                
Query: 531  gagcaccaatccgggaggta 550
            |||||||| |||||||||||
Sbjct: 854  gagcaccagtccgggaggta 835



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                              
Query: 618 aggttcctatggcaccaggtcacgatgatgattgt 652
           ||||||||||||||||| ||||||||||| |||||
Sbjct: 767 aggttcctatggcaccatgtcacgatgattattgt 733
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  143 bits (72), Expect = 8e-31
 Identities = 138/160 (86%)
 Strand = Plus / Minus

                                                                            
Query: 487      cctcaagagacaatgactcggcaatcttgacataatccgagggcgagcaccaatccggga 546
                |||||||||||| |||||||||||| ||||||||||| || || |||||||| || ||||
Sbjct: 28915263 cctcaagagacagtgactcggcaattttgacataatcagaaggagagcaccagtctggga 28915204

                                                                            
Query: 547      ggtaatatgcatcacaaatctttttcaaaagattcagctcgtcaggtttcagtgagtcct 606
                | ||||||||||| || ||| ||||||  ||||||||||| ||||||||||| || || |
Sbjct: 28915203 gataatatgcatcgcatatccttttcaggagattcagctcatcaggtttcagggactctt 28915144

                                                        
Query: 607      cagatagcgcaaggttcctatggcaccaggtcacgatgat 646
                | ||| || | ||||||||||||||||||||||| |||||
Sbjct: 28915143 cggatggctcgaggttcctatggcaccaggtcacaatgat 28915104



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 81/92 (88%)
 Strand = Plus / Minus

                                                                            
Query: 291      ttgcggcaggtgatgatggtgaacttgatcaggcctttcttgtagccttggatcatgaga 350
                ||||| ||||||||||||||||| ||||| || ||||||||||| |||| |||||| |||
Sbjct: 28915700 ttgcgacaggtgatgatggtgaatttgatgagccctttcttgtatccttcgatcatcaga 28915641

                                                
Query: 351      ggcatcaccagtgctccctttatcgtcttcca 382
                |||||||||| ||| ||  |||||||||||||
Sbjct: 28915640 ggcatcaccattgcacctcttatcgtcttcca 28915609



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 76/92 (82%)
 Strand = Plus / Minus

                                                                            
Query: 384      ccactccttagtagagaagtgaggcctttccatgtcagtgctgattggatgacagcaggc 443
                ||||| ||||| |||||||| |  ||||||||||||| ||||||||  || || ||||||
Sbjct: 28915507 ccacttcttagcagagaagttaaacctttccatgtcaatgctgattttataaccgcaggc 28915448

                                                
Query: 444      caaaacggggccacgttttcagaccagtcagc 475
                || || ||||| ||||| || ||||| |||||
Sbjct: 28915447 cagaatggggcgacgttctctgaccaatcagc 28915416
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>dbj|AP003994.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1111_E07
          Length = 123613

 Score =  143 bits (72), Expect = 8e-31
 Identities = 138/160 (86%)
 Strand = Plus / Minus

                                                                          
Query: 487    cctcaagagacaatgactcggcaatcttgacataatccgagggcgagcaccaatccggga 546
              |||||||||||| |||||||||||| ||||||||||| || || |||||||| || ||||
Sbjct: 107955 cctcaagagacagtgactcggcaattttgacataatcagaaggagagcaccagtctggga 107896

                                                                          
Query: 547    ggtaatatgcatcacaaatctttttcaaaagattcagctcgtcaggtttcagtgagtcct 606
              | ||||||||||| || ||| ||||||  ||||||||||| ||||||||||| || || |
Sbjct: 107895 gataatatgcatcgcatatccttttcaggagattcagctcatcaggtttcagggactctt 107836

                                                      
Query: 607    cagatagcgcaaggttcctatggcaccaggtcacgatgat 646
              | ||| || | ||||||||||||||||||||||| |||||
Sbjct: 107835 cggatggctcgaggttcctatggcaccaggtcacaatgat 107796



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 81/92 (88%)
 Strand = Plus / Minus

                                                                          
Query: 291    ttgcggcaggtgatgatggtgaacttgatcaggcctttcttgtagccttggatcatgaga 350
              ||||| ||||||||||||||||| ||||| || ||||||||||| |||| |||||| |||
Sbjct: 108392 ttgcgacaggtgatgatggtgaatttgatgagccctttcttgtatccttcgatcatcaga 108333

                                              
Query: 351    ggcatcaccagtgctccctttatcgtcttcca 382
              |||||||||| ||| ||  |||||||||||||
Sbjct: 108332 ggcatcaccattgcacctcttatcgtcttcca 108301



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 76/92 (82%)
 Strand = Plus / Minus

                                                                          
Query: 384    ccactccttagtagagaagtgaggcctttccatgtcagtgctgattggatgacagcaggc 443
              ||||| ||||| |||||||| |  ||||||||||||| ||||||||  || || ||||||
Sbjct: 108199 ccacttcttagcagagaagttaaacctttccatgtcaatgctgattttataaccgcaggc 108140

                                              
Query: 444    caaaacggggccacgttttcagaccagtcagc 475
              || || ||||| ||||| || ||||| |||||
Sbjct: 108139 cagaatggggcgacgttctctgaccaatcagc 108108
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>gb|DQ456877.1| Solanum tuberosum gamma-tocopherol methyltransferase (TMT) mRNA,
            complete cds
          Length = 1396

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 139/173 (80%)
 Strand = Plus / Minus

                                                                        
Query: 300  gtgatgatggtgaacttgatcaggcctttcttgtagccttggatcatgagaggcatcacc 359
            ||||||||||  || ||||| || ||||||||||| ||||  ||||| || |||||  ||
Sbjct: 1191 gtgatgatggcaaatttgatgagacctttcttgtatccttcaatcatcagtggcattgcc 1132

                                                                        
Query: 360  agtgctccctttatcgtcttccatccactccttagtagagaagtgaggcctttccatgtc 419
            |||||  | || || |||||||||||||| | |||||  || |||| ||| |||||||||
Sbjct: 1131 agtgcagctttgattgtcttccatccactgcgtagtactgatgtgaagcccttccatgtc 1072

                                                                 
Query: 420  agtgctgattggatgacagcaggccaaaacggggccacgttttcagaccagtc 472
            |||||||| |  ||||| || |||||||| || || || || |||||||||||
Sbjct: 1071 agtgctgactttatgactgctggccaaaatggagcaacattctcagaccagtc 1019
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>gb|DQ456876.1| Lycopersicon esculentum gamma-tocopherol methyltransferase (TMT)
            mRNA, complete cds
          Length = 1354

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 139/173 (80%)
 Strand = Plus / Minus

                                                                        
Query: 300  gtgatgatggtgaacttgatcaggcctttcttgtagccttggatcatgagaggcatcacc 359
            ||||||||||  || ||||| || ||||||||||| ||||  ||||| || |||||  ||
Sbjct: 1087 gtgatgatggcaaatttgatgagacctttcttgtatccttcaatcatcagtggcattgcc 1028

                                                                        
Query: 360  agtgctccctttatcgtcttccatccactccttagtagagaagtgaggcctttccatgtc 419
            |||||  | || || |||||||||||||| | |||||  || |||| ||| |||||||||
Sbjct: 1027 agtgcagctttgattgtcttccatccactgcgtagtactgatgtgaagcccttccatgtc 968

                                                                 
Query: 420  agtgctgattggatgacagcaggccaaaacggggccacgttttcagaccagtc 472
            |||||||| |  ||||| || |||||||| || || || || |||||||||||
Sbjct: 967  agtgctgactttatgactgctggccaaaatggagcaacattctcagaccagtc 915
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>gb|DQ456880.1| Gossypium hirsutum gamma-tocopherol methyltransferase (TMT) mRNA,
            complete cds
          Length = 1384

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 114/141 (80%)
 Strand = Plus / Minus

                                                                        
Query: 287  gggtttgcggcaggtgatgatggtgaacttgatcaggcctttcttgtagccttggatcat 346
            |||||| ||||| |||||||| | |||||| ||||  ||||||| ||| |||||||||||
Sbjct: 1154 gggtttccggcatgtgatgatagcgaactttatcacccctttctggtacccttggatcat 1095

                                                                        
Query: 347  gagaggcatcaccagtgctccctttatcgtcttccatccactccttagtagagaagtgag 406
             |  |||||||| ||||| || ||||| || ||  ||||||| | ||| || || |||| 
Sbjct: 1094 caatggcatcactagtgcaccttttattgtttttaatccacttcgtagcagtgatgtgaa 1035

                                 
Query: 407  gcctttccatgtcagtgctga 427
            ||| |||||||||| ||||||
Sbjct: 1034 gcccttccatgtcaatgctga 1014
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>gb|AF213481.1|AF213481 Perilla frutescens gamma-tocopherol methyltransferase (TMT) mRNA,
            complete cds
          Length = 1369

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 108/133 (81%)
 Strand = Plus / Minus

                                                                        
Query: 288  ggtttgcggcaggtgatgatggtgaacttgatcaggcctttcttgtagccttggatcatg 347
            ||||| ||||| || |||||||  || ||||||| ||| ||||| || |||| |||||| 
Sbjct: 1188 ggttttcggcatgtaatgatggcaaatttgatcacgcccttcttatatccttcgatcatc 1129

                                                                        
Query: 348  agaggcatcaccagtgctccctttatcgtcttccatccactccttagtagagaagtgagg 407
            |  |||||||||| ||||||  |||| ||||||||||| |||||||| || || || | |
Sbjct: 1128 aatggcatcaccattgctcctcttatagtcttccatccgctccttagcagtgaggttatg 1069

                         
Query: 408  cctttccatgtca 420
            || ||||||||||
Sbjct: 1068 cccttccatgtca 1056
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>gb|AF527809.1| Sorghum bicolor clone BAC SB_BBc0234M12 php200725 orthologous region
          Length = 108553

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 48/55 (87%)
 Strand = Plus / Plus

                                                                    
Query: 435   acagcaggccaaaacggggccacgttttcagaccagtcagccgttttgatatcct 489
             ||||| |||||||||||| ||||||| || ||||||||||| ||  |||||||||
Sbjct: 93102 acagcgggccaaaacgggaccacgttctccgaccagtcagctgtcctgatatcct 93156



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 48/55 (87%)
 Strand = Plus / Plus

                                                                    
Query: 291   ttgcggcaggtgatgatggtgaacttgatcaggcctttcttgtagccttggatca 345
             ||||||||||||||||  ||||| ||||| || || ||| |||||||||||||||
Sbjct: 92837 ttgcggcaggtgatgactgtgaatttgatgagccccttcctgtagccttggatca 92891



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                
Query: 618   aggttcctatggcaccaggtcacgatgatgattgt 652
             |||||||||||||| || ||||||||||| |||||
Sbjct: 93518 aggttcctatggcagcatgtcacgatgattattgt 93552
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>gb|DQ229834.1| Helianthus annuus cultivar RHA801 gamma-tocopherol methyltransferase
            (gamma-TMT) gene, complete cds
          Length = 4304

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                  
Query: 435  acagcaggccaaaacggggccacgttttcagaccagtc 472
            ||||||||||||||||||||||| ||  ||||||||||
Sbjct: 3029 acagcaggccaaaacggggccacattgccagaccagtc 2992
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>gb|DQ229833.1| Helianthus annuus cultivar LG24 gamma-tocopherol methyltransferase
            (gamma-TMT) gene, complete sequence
          Length = 4304

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                  
Query: 435  acagcaggccaaaacggggccacgttttcagaccagtc 472
            ||||||||||||||||||||||| ||  ||||||||||
Sbjct: 3029 acagcaggccaaaacggggccacattgccagaccagtc 2992
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>gb|AC169370.4| Sorghum bicolor clone SB_BBc0011I20, complete sequence
          Length = 135209

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 126/160 (78%)
 Strand = Plus / Plus

                                                                         
Query: 487   cctcaagagacaatgactcggcaatcttgacataatccgagggcgagcaccaatccggga 546
             |||| ||||||| ||||| |||||| |||||||| || || |  |||||||| |||||||
Sbjct: 24023 cctcgagagacagtgacttggcaatgttgacatattctgaagctgagcaccactccggga 24082

                                                                         
Query: 547   ggtaatatgcatcacaaatctttttcaaaagattcagctcgtcaggtttcagtgagtcct 606
              ||| |||||||  |||||| | ||||  |   |||| || || |||||||| |||   |
Sbjct: 24083 agtagtatgcattgcaaatcctcttcaggatgctcagttcatcgggtttcagcgaggttt 24142

                                                     
Query: 607   cagatagcgcaaggttcctatggcaccaggtcacgatgat 646
             ||||| |  | ||||||||||||||||| | |||||||||
Sbjct: 24143 cagatggttcgaggttcctatggcaccatgccacgatgat 24182
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>gb|AY960126.1| Glycine max gamma-tocopherol methyltransferase mRNA, complete cds
          Length = 1292

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 543 gggaggtaatatgcatcacaaatctt 568
           ||||||||||||||||| ||||||||
Sbjct: 839 gggaggtaatatgcatcgcaaatctt 814
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>gb|DQ229832.1| Helianthus annuus cultivar RHA801 gamma-tocopherol methyltransferase
            (gamma-TMT) gene, complete cds
          Length = 4151

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 435  acagcaggccaaaacggggccacgttttcagaccagtc 472
            |||||||||||||| |||||||| ||  ||||||||||
Sbjct: 2995 acagcaggccaaaatggggccacattgccagaccagtc 2958
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>gb|DQ229831.1| Helianthus annuus cultivar LG24 gamma-tocopherol methyltransferase
            (gamma-TMT) gene, complete cds
          Length = 4151

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 435  acagcaggccaaaacggggccacgttttcagaccagtc 472
            |||||||||||||| |||||||| ||  ||||||||||
Sbjct: 2995 acagcaggccaaaatggggccacattgccagaccagtc 2958
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>gb|DQ229830.1| Helianthus annuus cultivar RHA280 gamma-tocopherol methyltransferase
            (gamma-TMT) gene, complete cds
          Length = 4035

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 435  acagcaggccaaaacggggccacgttttcagaccagtc 472
            |||||||||||||| |||||||| ||  ||||||||||
Sbjct: 2879 acagcaggccaaaatggggccacattgccagaccagtc 2842
to top
>gb|DQ229829.1| Helianthus annuus cultivar R112 gamma-tocopherol methyltransferase
            (gamma-TMT) gene, complete cds
          Length = 4029

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 435  acagcaggccaaaacggggccacgttttcagaccagtc 472
            |||||||||||||| |||||||| ||  ||||||||||
Sbjct: 2873 acagcaggccaaaatggggccacattgccagaccagtc 2836
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>gb|DQ229828.1| Helianthus annuus cultivar NMS373 gamma-tocopherol methyltransferase
            (gamma-TMT) gene, complete cds
          Length = 4294

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 435  acagcaggccaaaacggggccacgttttcagaccagtc 472
            |||||||||||||| |||||||| ||  ||||||||||
Sbjct: 3008 acagcaggccaaaatggggccacattgccagaccagtc 2971
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>ref|XM_472495.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1617

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 140 tatggcacttgcagttgcagg 160
           |||||||||||||||||||||
Sbjct: 928 tatggcacttgcagttgcagg 948
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>emb|AL606632.5| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042L16,
             complete sequence
          Length = 163738

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 140   tatggcacttgcagttgcagg 160
             |||||||||||||||||||||
Sbjct: 88777 tatggcacttgcagttgcagg 88797
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>gb|AC162801.2| Mus musculus BAC clone RP24-65E6 from chromosome 12, complete sequence
          Length = 225198

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 470    gtcagccgttttgatatcctc 490
              |||||||||||||||||||||
Sbjct: 174376 gtcagccgttttgatatcctc 174396
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 140      tatggcacttgcagttgcagg 160
                |||||||||||||||||||||
Sbjct: 21275303 tatggcacttgcagttgcagg 21275323
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>emb|BX571681.7| Zebrafish DNA sequence from clone DKEY-73N10 in linkage group 18,
             complete sequence
          Length = 184543

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 401   agtgaggcctttccatgtcag 421
             |||||||||||||||||||||
Sbjct: 84141 agtgaggcctttccatgtcag 84121
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>dbj|AK070730.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023063K10, full
            insert sequence
          Length = 2705

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 140  tatggcacttgcagttgcagg 160
            |||||||||||||||||||||
Sbjct: 1733 tatggcacttgcagttgcagg 1753
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>ref|XM_631468.1| Dictyostelium discoideum hypothetical protein (DDB0219387), partial
            mRNA
          Length = 3999

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 557  atcacaaatctttttcaaaa 576
            ||||||||||||||||||||
Sbjct: 2301 atcacaaatctttttcaaaa 2282
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>gb|AC133880.7| Mus musculus chromosome 15, clone RP24-142B13, complete sequence
          Length = 135091

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 414  catgtcagtgctgattggat 433
            ||||||||||||||||||||
Sbjct: 7279 catgtcagtgctgattggat 7298
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>gb|AC149481.1| Populus trichocarpa clone Pop1-16J18, complete sequence
          Length = 120131

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 557   atcacaaatctttttcaaaagatt 580
             ||||||||| ||||||||||||||
Sbjct: 16250 atcacaaatttttttcaaaagatt 16227
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>gb|AC147091.2| Pan troglodytes BAC clone RP43-57O16 from 7, complete sequence
          Length = 170233

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 258    gtctcagcttctccttctgt 277
              ||||||||||||||||||||
Sbjct: 134081 gtctcagcttctccttctgt 134062
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>gb|AC002124.2| Homo sapiens BAC clone CTB-180O1 from 7, complete sequence
          Length = 100923

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 258   gtctcagcttctccttctgt 277
             ||||||||||||||||||||
Sbjct: 47328 gtctcagcttctccttctgt 47347
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>gb|AC124385.3| Mus musculus BAC clone RP24-421A2 from chromosome 1, complete sequence
          Length = 163778

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 73    cgatggatgtaaccaaaaga 92
             ||||||||||||||||||||
Sbjct: 46105 cgatggatgtaaccaaaaga 46086
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>gb|AC121888.3| Mus musculus BAC clone RP24-142M5 from chromosome 1, complete sequence
          Length = 158354

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 73     cgatggatgtaaccaaaaga 92
              ||||||||||||||||||||
Sbjct: 140566 cgatggatgtaaccaaaaga 140547
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>gb|AC145920.1| Pan troglodytes BAC clone RP43-10C15 from 7, complete sequence
          Length = 188373

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 258 gtctcagcttctccttctgt 277
           ||||||||||||||||||||
Sbjct: 877 gtctcagcttctccttctgt 896
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>emb|AL589685.17| Human DNA sequence from clone RP11-443G18 on chromosome 1 Contains the
             5' end of the gene for Est1p-like protein B (EST1B), novel
             gene (MGC13102), novel gene (MGC31963), a von
             Hippel-Lindau syndrome (VHL) pseudogene, the CCT3 gene for
             chaperonin containing TCP1 subunit 3 (gamma), the gene for
             SSTK-interacting protein (SSTK-IP) and the 5' end of the
             RHBG gene for Rhesus blood group B glycoprotein, complete
             sequence
          Length = 107819

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 260   ctcagcttctccttctgtga 279
             ||||||||||||||||||||
Sbjct: 96268 ctcagcttctccttctgtga 96249
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>emb|AJ235270.1|RPXX01 Rickettsia prowazekii strain Madrid E, complete genome; segment 1/4
          Length = 282610

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 564    atctttttcaaaagattcag 583
              ||||||||||||||||||||
Sbjct: 134837 atctttttcaaaagattcag 134818
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>gb|AC154210.2| Mus musculus BAC clone RP24-113C3 from chromosome 13, complete sequence
          Length = 193176

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 296   gcaggtgatgatggtgaact 315
             ||||||||||||||||||||
Sbjct: 38820 gcaggtgatgatggtgaact 38839
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>gb|AC095029.3| Homo sapiens chromosome 3 clone RP11-208J17, complete sequence
          Length = 151787

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 429    tggatgacagcaggccaaaa 448
              ||||||||||||||||||||
Sbjct: 135784 tggatgacagcaggccaaaa 135803
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>gb|AC107624.1| Homo sapiens chromosome 3 clone RP11-744H21, complete sequence
          Length = 170282

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 429    tggatgacagcaggccaaaa 448
              ||||||||||||||||||||
Sbjct: 124274 tggatgacagcaggccaaaa 124255
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>gb|AC024565.6| Homo sapiens chromosome 5 clone CTD-2104P22, complete sequence
          Length = 108039

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 556   catcacaaatctttttcaaa 575
             ||||||||||||||||||||
Sbjct: 94859 catcacaaatctttttcaaa 94840
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>gb|AC092181.9| Homo sapiens 3 BAC RP11-735O9 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 183168

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 567   tttttcaaaagattcagctc 586
             ||||||||||||||||||||
Sbjct: 78330 tttttcaaaagattcagctc 78311
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>gb|AC127285.4| Mus musculus BAC clone RP23-336P20 from chromosome 8, complete sequence
          Length = 232127

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 120   gctttagaaaccacttttcatatg 143
             ||||||||||||||| ||||||||
Sbjct: 61122 gctttagaaaccactcttcatatg 61145
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>emb|Z82318.1|RPZ82318 R.prowazekii genomic DNA fragment (clone A21F)
          Length = 431

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 564 atctttttcaaaagattcag 583
           ||||||||||||||||||||
Sbjct: 7   atctttttcaaaagattcag 26
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>emb|CT010428.13| Mouse DNA sequence from clone RP23-304G18 on chromosome 13, complete
             sequence
          Length = 226457

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 296   gcaggtgatgatggtgaact 315
             ||||||||||||||||||||
Sbjct: 16247 gcaggtgatgatggtgaact 16228
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>emb|AL773523.4| Mouse DNA sequence from clone RP23-186B18 on chromosome 2, complete
             sequence
          Length = 198403

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 103   aatctgaagagaattttgct 122
             ||||||||||||||||||||
Sbjct: 29732 aatctgaagagaattttgct 29713
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>emb|AL669901.26| Mouse DNA sequence from clone RP23-35N5 on chromosome X, complete
              sequence
          Length = 226126

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 16     tttttgcccctagctcaaca 35
              ||||||||||||||||||||
Sbjct: 183808 tttttgcccctagctcaaca 183789
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>emb|AL591952.9| Mouse DNA sequence from clone RP23-25N17 on chromosome 15, complete
              sequence
          Length = 208835

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 414    catgtcagtgctgattggat 433
              ||||||||||||||||||||
Sbjct: 188572 catgtcagtgctgattggat 188591


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,978,155
Number of Sequences: 3902068
Number of extensions: 5978155
Number of successful extensions: 117059
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 116879
Number of HSP's gapped (non-prelim): 174
length of query: 654
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 631
effective length of database: 17,143,297,704
effective search space: 10817420851224
effective search space used: 10817420851224
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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