ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal1l04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1HOT13_YEAST (P36078) Helper of Tim protein 13 29 2.6
2LERL1_PONPY (Q5RDE9) Leptin receptor overlapping transcript-like 1 29 3.4
3LERL1_MOUSE (Q9CQ74) Leptin receptor overlapping transcript-like 1 29 3.4
4LERL1_HUMAN (O95214) Leptin receptor overlapping transcript-like 1 29 3.4

>HOT13_YEAST (P36078) Helper of Tim protein 13|
          Length = 116

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 7/51 (13%)
 Frame = -1

Query: 268 CGVCRHAELLCAHFGXYKLNLDLASEASKXPVPSGC-------FQLPPKAL 137
           CGVCRH E+  A +  Y  N +L     + P   GC       FQ PP A+
Sbjct: 68  CGVCRH-EMTFAEY--YDYNSNLICPNCRSPFNPGCKLHYHLYFQNPPPAM 115



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>LERL1_PONPY (Q5RDE9) Leptin receptor overlapping transcript-like 1|
          Length = 131

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = -1

Query: 136 GYKSIID*SYFGPLGHTVLLY-CCLPACNFYWP 41
           G K++I  S+ G +G   L+  C LP  N YWP
Sbjct: 3   GIKALISLSFGGAIGLMFLMLGCALPIYNKYWP 35



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>LERL1_MOUSE (Q9CQ74) Leptin receptor overlapping transcript-like 1|
          Length = 131

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = -1

Query: 136 GYKSIID*SYFGPLGHTVLLY-CCLPACNFYWP 41
           G K++I  S+ G +G   L+  C LP  N YWP
Sbjct: 3   GIKALISLSFGGAIGLMFLMLGCALPIYNQYWP 35



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>LERL1_HUMAN (O95214) Leptin receptor overlapping transcript-like 1|
          Length = 131

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = -1

Query: 136 GYKSIID*SYFGPLGHTVLLY-CCLPACNFYWP 41
           G K++I  S+ G +G   L+  C LP  N YWP
Sbjct: 3   GIKALISLSFGGAIGLMFLMLGCALPIYNKYWP 35


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,362,567
Number of Sequences: 219361
Number of extensions: 823860
Number of successful extensions: 1972
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1757
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1972
length of database: 80,573,946
effective HSP length: 78
effective length of database: 63,463,788
effective search space used: 1523130912
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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