ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags30e21 |
|---|---|
| Clone Library Name | barley_pub |
>ZDH20_HUMAN (Q5W0Z9) Probable palmitoyltransferase ZDHHC20 (EC 2.3.1.-) (Zinc| finger DHHC domain-containing protein 20) (DHHC-20) Length = 365 Score = 59.3 bits (142), Expect = 1e-08 Identities = 37/98 (37%), Positives = 54/98 (55%), Gaps = 4/98 (4%) Frame = -1 Query: 664 LLPHFIAFFSDVEIPGTPSALATTFLTFVLNLAFSLSVLGFMIMHISLVSGNTTTIEAYE 485 +L +FI F+++ E+ T + FL FV + F +SVL H LV N TTIE++ Sbjct: 189 VLEYFIKFWTN-ELTDTRAKFHVLFLFFV-SAMFFISVLSLFSYHCWLVGKNRTTIESFR 246 Query: 484 KKTSPRWM----YDLGRKKNFAQVFGNDKKYWFIPAYS 383 T + LG KN+ QVFG++KKYW +P +S Sbjct: 247 APTFSYGPDGNGFSLGCSKNWRQVFGDEKKYWLLPIFS 284
>ZDHC2_MOUSE (P59267) Palmitoyltransferase ZDHHC2 (EC 2.3.1.-) (Zinc finger DHHC| domain-containing protein 2) (DHHC-2) Length = 366 Score = 56.6 bits (135), Expect = 6e-08 Identities = 34/99 (34%), Positives = 54/99 (54%), Gaps = 4/99 (4%) Frame = -1 Query: 661 LPHFIAFFSDVEIPGTPSALATTFLTFVLNLAFSLSVLGFMIMHISLVSGNTTTIEAYEK 482 L +FI F+++ +P T + FL F + FS+S+ H LVS N +T+EA+ Sbjct: 190 LQYFIRFWTN-GLPDTQAKFHIMFLFFAAAM-FSVSLSSLFGYHCWLVSKNKSTLEAFRN 247 Query: 481 KT----SPRWMYDLGRKKNFAQVFGNDKKYWFIPAYSEE 377 + + + LG KN QVFG++KKYW +P +S + Sbjct: 248 PVFRHGTDKNGFSLGFSKNMRQVFGDEKKYWLLPVFSSQ 286
>ZDHC2_RAT (Q9JKR5) Palmitoyltransferase ZDHHC2 (EC 2.3.1.-) (Zinc finger DHHC| domain-containing protein 2) (DHHC-2) Length = 366 Score = 56.2 bits (134), Expect = 8e-08 Identities = 34/99 (34%), Positives = 54/99 (54%), Gaps = 4/99 (4%) Frame = -1 Query: 661 LPHFIAFFSDVEIPGTPSALATTFLTFVLNLAFSLSVLGFMIMHISLVSGNTTTIEAYEK 482 L +FI F+++ +P T + FL F + FS+S+ H LVS N +T+EA+ Sbjct: 190 LQYFIRFWTN-GLPDTQAKFHIMFLFFAAAM-FSVSLSSLFGYHCWLVSKNKSTLEAFRN 247 Query: 481 KT----SPRWMYDLGRKKNFAQVFGNDKKYWFIPAYSEE 377 + + + LG KN QVFG++KKYW +P +S + Sbjct: 248 PVFRHGTDKNGFSLGFSKNMRQVFGDEKKYWLLPIFSSQ 286
>ZDH20_MOUSE (Q5Y5T1) Probable palmitoyltransferase ZDHHC20 (EC 2.3.1.-) (Zinc| finger DHHC domain-containing protein 20) (DHHC-20) Length = 380 Score = 55.8 bits (133), Expect = 1e-07 Identities = 32/84 (38%), Positives = 44/84 (52%), Gaps = 7/84 (8%) Frame = -1 Query: 613 PSALATTFLTFVLNLAFSLSVLGFMIMHISLVSGNTTTIEAYEKKTSPRWMY-------D 455 PSA F ++ F +SVL H LV N TTIE++ +P + Y Sbjct: 219 PSAKFHVLFLFFVSAMFFVSVLSLFSYHCWLVGKNRTTIESFR---APMFSYGIDGNGFS 275 Query: 454 LGRKKNFAQVFGNDKKYWFIPAYS 383 LG KN+ QVFG++KKYW +P +S Sbjct: 276 LGCSKNWRQVFGDEKKYWLVPIFS 299
>ZDHC2_HUMAN (Q9UIJ5) Palmitoyltransferase ZDHHC2 (EC 2.3.1.-) (Zinc finger DHHC| domain-containing protein 2) (DHHC-2) (Zinc finger protein 372) (Reduced expression associated with metastasis protein) (Ream) (Reduced expression in cancer protein) (Rec) Length = 367 Score = 55.5 bits (132), Expect = 1e-07 Identities = 34/97 (35%), Positives = 53/97 (54%), Gaps = 4/97 (4%) Frame = -1 Query: 661 LPHFIAFFSDVEIPGTPSALATTFLTFVLNLAFSLSVLGFMIMHISLVSGNTTTIEAYEK 482 L +FI F+++ +P T + FL F + FS+S+ H LVS N +T+EA+ Sbjct: 191 LQYFIKFWTN-GLPDTQAKFHIMFLFFAAAM-FSVSLSSLFGYHCWLVSKNKSTLEAFRS 248 Query: 481 KT----SPRWMYDLGRKKNFAQVFGNDKKYWFIPAYS 383 + + + LG KN QVFG++KKYW +P +S Sbjct: 249 PVFRHGTDKNGFSLGFSKNMRQVFGDEKKYWLLPIFS 285
>ZDH15_XENLA (Q5FWL7) Palmitoyltransferase ZDHHC15 (EC 2.3.1.-) (Zinc finger| DHHC domain-containing protein 15 homolog) (DHHC-15) Length = 338 Score = 48.1 bits (113), Expect = 2e-05 Identities = 36/113 (31%), Positives = 57/113 (50%), Gaps = 4/113 (3%) Frame = -1 Query: 655 HFIAFFSDVEIPGTPSALATTFLTFVLNLAFSLSVLGFMIMHISLVSGNTTTIEAYEK-- 482 +FI +++D G + FL FV L F +S++ H LVS N TT+EA+ Sbjct: 195 YFILYWTDTLSNGR-AKFHVLFLLFVA-LMFFISLMFLFGYHCWLVSLNRTTLEAFSTPV 252 Query: 481 -KTSP-RWMYDLGRKKNFAQVFGNDKKYWFIPAYSEEDLRRMPALQGLDYPVR 329 ++ P + + LG ++N QVFG ++K W IP ++ G YP+R Sbjct: 253 FQSGPDKNGFHLGIRRNLEQVFGKERKLWLIPVFTSLG-------DGFTYPMR 298
>ZDH15_RAT (Q2TGJ4) Palmitoyltransferase ZDHHC15 (EC 2.3.1.-) (Zinc finger| DHHC domain-containing protein 15) (DHHC-15) Length = 337 Score = 47.8 bits (112), Expect = 3e-05 Identities = 39/119 (32%), Positives = 57/119 (47%), Gaps = 4/119 (3%) Frame = -1 Query: 655 HFIAFFSDVEIPGTPSALATTFLTFVLNLAFSLSVLGFMIMHISLVSGNTTTIEAYEKKT 476 +FI ++ E+P S FL FV + F V+ F H LVS N TT+EA+ Sbjct: 195 YFIKYWRG-ELPSVRSKFHVLFLLFVACMFFVSLVILFGY-HCWLVSRNKTTLEAFCTPV 252 Query: 475 ----SPRWMYDLGRKKNFAQVFGNDKKYWFIPAYSEEDLRRMPALQGLDYPVRTDLDGQ 311 + ++LG KN QVFG++KK+W IP S G +P+R+ + Q Sbjct: 253 FTSGPEKNGFNLGFIKNIQQVFGDNKKFWLIPIGSSPG-------DGHSFPMRSMNESQ 304
>ZDH15_MOUSE (Q8BGJ0) Palmitoyltransferase ZDHHC15 (EC 2.3.1.-) (Zinc finger| DHHC domain-containing protein 15) (DHHC-15) Length = 337 Score = 47.8 bits (112), Expect = 3e-05 Identities = 39/119 (32%), Positives = 57/119 (47%), Gaps = 4/119 (3%) Frame = -1 Query: 655 HFIAFFSDVEIPGTPSALATTFLTFVLNLAFSLSVLGFMIMHISLVSGNTTTIEAYEKKT 476 +FI ++ E+P S FL FV + F V+ F H LVS N TT+EA+ Sbjct: 195 YFIKYWRG-ELPSVRSKFHVLFLLFVACMFFVSLVILFGY-HCWLVSRNKTTLEAFCTPV 252 Query: 475 ----SPRWMYDLGRKKNFAQVFGNDKKYWFIPAYSEEDLRRMPALQGLDYPVRTDLDGQ 311 + ++LG KN QVFG++KK+W IP S G +P+R+ + Q Sbjct: 253 FTSGPEKNGFNLGFIKNIQQVFGDNKKFWLIPIGSSPG-------DGHSFPMRSMNESQ 304
>ZDH15_HUMAN (Q96MV8) Palmitoyltransferase ZDHHC15 (EC 2.3.1.-) (Zinc finger| DHHC domain-containing protein 15) (DHHC-15) Length = 337 Score = 47.0 bits (110), Expect = 5e-05 Identities = 39/119 (32%), Positives = 56/119 (47%), Gaps = 4/119 (3%) Frame = -1 Query: 655 HFIAFFSDVEIPGTPSALATTFLTFVLNLAFSLSVLGFMIMHISLVSGNTTTIEAYEKKT 476 +FI ++ E+P S FL FV + F V+ F H LVS N TT+EA+ Sbjct: 195 YFIKYWRG-ELPSVRSKFHVLFLLFVACMFFVSLVILFGY-HCWLVSRNKTTLEAFCTPV 252 Query: 475 ----SPRWMYDLGRKKNFAQVFGNDKKYWFIPAYSEEDLRRMPALQGLDYPVRTDLDGQ 311 + ++LG KN QVFG+ KK+W IP S G +P+R+ + Q Sbjct: 253 FTSGPEKNGFNLGFIKNIQQVFGDKKKFWLIPIGSSPG-------DGHSFPMRSMNESQ 304
>PFA3_DEBHA (Q6BMV2) Palmitoyltransferase PFA3 (EC 2.3.1.-) (Protein fatty| acyltransferase 3) Length = 405 Score = 41.6 bits (96), Expect = 0.002 Identities = 33/106 (31%), Positives = 47/106 (44%), Gaps = 22/106 (20%) Frame = -1 Query: 643 FFSDVEIPGTPSALATTFLTFVLNLAFSLSVLGFMIMHISLVSGNTTTIEAYE------- 485 FF+D + +L FL FVL+LAF ++V GF+ + LV N TTIE E Sbjct: 237 FFADEKYNDHYLSLNLVFL-FVLSLAFFITVGGFLAFLLYLVFRNKTTIEFQENRWNFKN 295 Query: 484 ---------------KKTSPRWMYDLGRKKNFAQVFGNDKKYWFIP 392 KK ++DLG +N+ + G YW +P Sbjct: 296 DKNGKSFQYEFDGSGKKKKLGNIFDLGCGRNWRSIMGPSWYYWLLP 341
>YO44_CAEEL (Q8I0G4) Hypothetical protein ZK757.4| Length = 403 Score = 40.8 bits (94), Expect = 0.004 Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 4/74 (5%) Frame = -1 Query: 592 FLTFVLNLAFSLSVLGFMIMHISLVSGNTTTIEAYEKKTSP----RWMYDLGRKKNFAQV 425 FL F L+ FSLS+ H+ L + N TT+E++ + ++ G + N+ ++ Sbjct: 241 FLLF-LSCMFSLSLSFLFFYHLYLTAKNRTTVESFRAPMIDGKYAKDAFNHGIRANYREI 299 Query: 424 FGNDKKYWFIPAYS 383 FG+ YWF+P S Sbjct: 300 FGSHPLYWFLPVPS 313
>PFA4_USTMA (Q4PE27) Palmitoyltransferase PFA4 (EC 2.3.1.-) (Protein fatty| acyltransferase 4) Length = 604 Score = 38.1 bits (87), Expect = 0.024 Identities = 33/109 (30%), Positives = 47/109 (43%), Gaps = 15/109 (13%) Frame = -1 Query: 601 ATTFLTFVLNLAFSLSVLG----FMIMHISLVSGNTTTIEAYEKKTSP-----------R 467 A + V+N A + V+ F + H ++ N TTIE++EK + + Sbjct: 263 ARELVWLVVNYALCIPVILLVGIFSLYHFYCLAVNQTTIESWEKDRTATMIRRGRVRKVK 322 Query: 466 WMYDLGRKKNFAQVFGNDKKYWFIPAYSEEDLRRMPALQGLDYPVRTDL 320 + YDLG +N QV G W +P RM A GL YPV L Sbjct: 323 YPYDLGLWRNVRQVLGASPLVWCLPGAG----ARM-AGDGLKYPVANGL 366
>PFA4_CRYNE (Q5KLN1) Palmitoyltransferase PFA4 (EC 2.3.1.-) (Protein fatty| acyltransferase 4) Length = 456 Score = 38.1 bits (87), Expect = 0.024 Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 11/82 (13%) Frame = -1 Query: 544 FMIMHISLVSGNTTTIEAYEKK-----------TSPRWMYDLGRKKNFAQVFGNDKKYWF 398 F I H+ L GN+TTIE +EK ++ Y++G KN V G + W Sbjct: 195 FSIYHVYLACGNSTTIEGWEKDKVATLIRRGKIKEVKYPYNIGIYKNIKSVLGPNPFLWL 254 Query: 397 IPAYSEEDLRRMPALQGLDYPV 332 P + D GL +PV Sbjct: 255 WPQKMQGD--------GLSFPV 268
>PFA3_YARLI (Q6C4W5) Palmitoyltransferase PFA3 (EC 2.3.1.-) (Protein fatty| acyltransferase 3) Length = 401 Score = 32.7 bits (73), Expect = 1.00 Identities = 25/93 (26%), Positives = 39/93 (41%), Gaps = 19/93 (20%) Frame = -1 Query: 589 LTFVLNLAFSLSVLGFMIMHISLVSGNTTTIE--------------AYEKKTSPRW---- 464 + VL L F+++V F + LV N +T+E AY +P Sbjct: 223 ILMVLALVFAIAVGTFATFSLYLVFNNQSTVEFLESTQYRSAVPTAAYRYTFAPTSKTVG 282 Query: 463 -MYDLGRKKNFAQVFGNDKKYWFIPAYSEEDLR 368 ++D+G K+NF V G+ W +P E R Sbjct: 283 NVFDVGWKRNFQLVMGDKWWMWLLPIQPSEAAR 315
>ZDH12_HUMAN (Q96GR4) Probable palmitoyltransferase ZDHHC12 (EC 2.3.1.-) (Zinc| finger DHHC domain-containing protein 12) (DHHC-12) (Zinc finger protein 400) Length = 267 Score = 32.7 bits (73), Expect = 1.00 Identities = 27/87 (31%), Positives = 37/87 (42%), Gaps = 7/87 (8%) Frame = -1 Query: 592 FLTFVLNLAFSLSVLGFMIMHISLVSGNTTTIEAYEK------KTSPRWMYDLGRKKNFA 431 F TF+L FSL ++ H+ LV+ NTTT E + P +D G +N A Sbjct: 181 FATFLLLSLFSLVASLLLVSHLYLVASNTTTWEFISSHRIAYLRQRPSNPFDRGLTRNLA 240 Query: 430 QVF-GNDKKYWFIPAYSEEDLRRMPAL 353 F G W EE+ PA+ Sbjct: 241 HFFCGWPSGSWETLWAEEEEEGSSPAV 267
>PFA5_YARLI (Q6C7D1) Palmitoyltransferase PFA5 (EC 2.3.1.-) (Protein fatty| acyltransferase 5) Length = 334 Score = 32.3 bits (72), Expect = 1.3 Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 13/48 (27%) Frame = -1 Query: 460 YDLGRKKNFAQVFGNDKKYWFIP-------------AYSEEDLRRMPA 356 +D G KN+ QVFG + WF+P AY ++ L R+PA Sbjct: 274 FDQGFAKNWRQVFGTNPLIWFLPFPVVPAAEDYFSNAYGQKFLERIPA 321
>PFA3_CANAL (Q5ADN9) Palmitoyltransferase PFA3 (EC 2.3.1.-) (Protein fatty| acyltransferase 3) Length = 386 Score = 31.6 bits (70), Expect = 2.2 Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 23/86 (26%) Frame = -1 Query: 580 VLNLAFSLSVLGFMIMHISLVSGNTTTIEAYEKKTSPRW--------------------- 464 +L+ AF+++V F + I L N TTIE EK+ + R Sbjct: 237 ILSFAFAIAVSVFAMFSIYLCCKNLTTIEFQEKRWNYRGQANDERFNYEFDNNGKRKKIN 296 Query: 463 --MYDLGRKKNFAQVFGNDKKYWFIP 392 ++DLG +N+ V G + W +P Sbjct: 297 TNIFDLGIMENWKSVMGPNWITWILP 322
>RAB3I_RAT (Q62739) RAB3A-interacting protein (Rabin-3) (SSX2-interacting| protein) Length = 460 Score = 30.8 bits (68), Expect = 3.8 Identities = 23/59 (38%), Positives = 29/59 (49%), Gaps = 4/59 (6%) Frame = +3 Query: 315 PSKSVLTG*SRPCRAGILRRSSSEYAGMNQYFLS----FPKT*AKFFFRPRSYIQRGLV 479 P K LTG S+PC+ I SS Y Y++S + T FF YIQ+GLV Sbjct: 376 PKKCALTGQSKPCKHRIKLGDSSSY-----YYISPVCRYRITSVCNFFTYIRYIQQGLV 429
>S26A3_HUMAN (P40879) Chloride anion exchanger (DRA protein) (Down-regulated in| adenoma) (Solute carrier family 26 member 3) Length = 764 Score = 30.8 bits (68), Expect = 3.8 Identities = 15/55 (27%), Positives = 34/55 (61%), Gaps = 2/55 (3%) Frame = -1 Query: 610 SALATTFLTFVLNLAFSLSVLGFMIMHI--SLVSGNTTTIEAYEKKTSPRWMYDL 452 +A + T L+ ++ LAF + +GF+++++ SL+SG TT + + ++++ L Sbjct: 178 AAASVTVLSGIIQLAFGILRIGFVVIYLSESLISGFTTAAAVHVLVSQLKFIFQL 232
>DXR_CHLCV (Q823G9) 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC| 1.1.1.267) (DXP reductoisomerase) (1-deoxyxylulose-5-phosphate reductoisomerase) (2-C-methyl-D-erythritol 4-phosphate synthase) Length = 379 Score = 30.0 bits (66), Expect = 6.5 Identities = 20/75 (26%), Positives = 39/75 (52%), Gaps = 6/75 (8%) Frame = +2 Query: 266 VVSSGALGKFVSLQ----LLPIQVCPDRIIEALQSGHPSQV--LF*VCRDEPILFVVSKD 427 +VS+G + K ++ Q +LPI + + + L+ + S+V L P+L+ +D Sbjct: 125 LVSAGEIIKEIAKQYQTRILPIDSEHNALYQCLEGKNTSEVKKLVLTASGGPLLYKSKED 184 Query: 428 LSKILLPAKIIHPTW 472 LS++ + + HP W Sbjct: 185 LSRVTIRDVLKHPIW 199
>ZDH12_MOUSE (Q8VC90) Probable palmitoyltransferase ZDHHC12 (EC 2.3.1.-) (Zinc| finger DHHC domain-containing protein 12) (DHHC-12) Length = 267 Score = 29.6 bits (65), Expect = 8.4 Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 7/64 (10%) Frame = -1 Query: 592 FLTFVLNLAFSLSVLGFMIMHISLVSGNTTTIE-------AYEKKTSPRWMYDLGRKKNF 434 F TF+L F+L V + H+ LV+ NTTT E AY ++ + +D G +N Sbjct: 181 FTTFLLLSFFALVVALLLASHLYLVARNTTTWEFISSHRIAYLRQRTSN-PFDRGPTRNL 239 Query: 433 AQVF 422 A F Sbjct: 240 AHFF 243 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 102,950,677 Number of Sequences: 219361 Number of extensions: 2319347 Number of successful extensions: 6058 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 5634 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6043 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6370891296 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
