| Clone Name | rbags30e14 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK102610.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033099C15, full insert sequence Length = 2158 Score = 351 bits (177), Expect = 2e-93 Identities = 309/353 (87%) Strand = Plus / Minus Query: 307 gagatcctctttggccaagcttgagaattgcttgtccaatgatcttgccgcacctagcca 366 |||||| || || |||||||| |||||||||||||| | ||| |||||||| |||||||| Sbjct: 1861 gagatcttccttagccaagctagagaattgcttgtctagtgaacttgccgcgcctagcca 1802 Query: 367 tgcaagcacgatgaccaacagtataccgccaaggtagggcgtcgagtttgccaaagagcc 426 ||| || || || ||||||||||| || ||||||||||| || ||||| || |||||||| Sbjct: 1801 tgctagaacaatcaccaacagtatgccaccaaggtagggggtggagttagctaaagagcc 1742 Query: 427 aaatatcaggatcagaaactgttggatcagcgcaccaccggacttgcccaatgggttgca 486 |||| | ||||||| |||||||| || || || ||||| ||||| |||||||||||||| Sbjct: 1741 aaatgtaaggatcatgaactgttgaataagagctccaccagacttccccaatgggttgca 1682 Query: 487 gacaacatcaatggctgcctttcccttcaacttcatatctccatccaaaggaatataggc 546 ||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||| Sbjct: 1681 gacaacatcaatggctgcctttcccttcaccttcatatcttcatccaaaggaatgtaggc 1622 Query: 547 catttctttgcacgggtcgaataaactgtactttgcactcttgctaaatatgttctgcag 606 |||||||||||| || || |||||||| ||||||||||||||||| ||||||||||| || Sbjct: 1621 catttctttgcatggatcaaataaactatactttgcactcttgctgaatatgttctgaag 1562 Query: 607 ggcacccacataaacagccgcaagaagaggggtcataccccacgtggcaagca 659 |||||||||||||| || ||||||||||||||||| ||| |||||||||| Sbjct: 1561 tgcacccacataaactgctgcaagaagaggggtcatgcccattgtggcaagca 1509 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 163 tggagatgagtttgatggtga 183 ||||||||||||||||||||| Sbjct: 2002 tggagatgagtttgatggtga 1982
>dbj|AK069624.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023025F15, full insert sequence Length = 2239 Score = 343 bits (173), Expect = 5e-91 Identities = 308/353 (87%) Strand = Plus / Minus Query: 307 gagatcctctttggccaagcttgagaattgcttgtccaatgatcttgccgcacctagcca 366 |||||| || || |||||||| |||||||||||||| | ||| |||||||| |||||||| Sbjct: 1856 gagatcttccttagccaagctagagaattgcttgtctagtgaacttgccgcgcctagcca 1797 Query: 367 tgcaagcacgatgaccaacagtataccgccaaggtagggcgtcgagtttgccaaagagcc 426 ||| || || || ||||||||||| || ||||||||||| || ||||| || |||||||| Sbjct: 1796 tgctagaacaatcaccaacagtatgccaccaaggtagggggtggagttagctaaagagcc 1737 Query: 427 aaatatcaggatcagaaactgttggatcagcgcaccaccggacttgcccaatgggttgca 486 |||| | ||||||| |||||||| || || || ||||| ||||| |||||||||||||| Sbjct: 1736 aaatgtaaggatcatgaactgttgaataagagctccaccagacttccccaatgggttgca 1677 Query: 487 gacaacatcaatggctgcctttcccttcaacttcatatctccatccaaaggaatataggc 546 ||||||||||||||||||||||||||||| |||||||||| || |||||||||| ||||| Sbjct: 1676 gacaacatcaatggctgcctttcccttcaccttcatatcttcacccaaaggaatgtaggc 1617 Query: 547 catttctttgcacgggtcgaataaactgtactttgcactcttgctaaatatgttctgcag 606 |||||||||||| || || |||||||| ||||||||||||||||| ||||||||||| || Sbjct: 1616 catttctttgcatggatcaaataaactatactttgcactcttgctgaatatgttctgaag 1557 Query: 607 ggcacccacataaacagccgcaagaagaggggtcataccccacgtggcaagca 659 |||||||||||||| || ||||||||||||||||| ||| |||||||||| Sbjct: 1556 tgcacccacataaactgctgcaagaagaggggtcatgcccattgtggcaagca 1504 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 163 tggagatgagtttgatggtga 183 ||||||||||||||||||||| Sbjct: 1997 tggagatgagtttgatggtga 1977
>ref|XM_463402.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1935 Score = 329 bits (166), Expect = 7e-87 Identities = 309/356 (86%), Gaps = 3/356 (0%) Strand = Plus / Minus Query: 307 gagatcctctttggccaagcttgagaattgcttgtccaatgatcttgccgcacctagcca 366 |||||| || || |||||||| |||||||||||||| | ||| |||||||| |||||||| Sbjct: 1785 gagatcttccttagccaagctagagaattgcttgtctagtgaacttgccgcgcctagcca 1726 Query: 367 tgcaagcacgatgaccaacagtataccgccaaggtagggcgtcgagtttgccaaagagcc 426 ||| || || || ||||||||||| || ||||||||||| || ||||| || |||||||| Sbjct: 1725 tgctagaacaatcaccaacagtatgccaccaaggtagggggtggagttagctaaagagcc 1666 Query: 427 aaatatcaggatcagaaactgttggatcagcgcaccaccggacttgcccaatgggttgca 486 |||| | ||||||| |||||||| || || || ||||| ||||| |||||||||||||| Sbjct: 1665 aaatgtaaggatcatgaactgttgaataagagctccaccagacttccccaatgggttgca 1606 Query: 487 gacaacatcaatggctgcctttcccttc---aacttcatatctccatccaaaggaatata 543 |||||||||||||||||||||||||||| | |||||||||| ||||||||||||| || Sbjct: 1605 gacaacatcaatggctgcctttcccttcacaaccttcatatcttcatccaaaggaatgta 1546 Query: 544 ggccatttctttgcacgggtcgaataaactgtactttgcactcttgctaaatatgttctg 603 ||||||||||||||| || || |||||||| ||||||||||||||||| ||||||||||| Sbjct: 1545 ggccatttctttgcatggatcaaataaactatactttgcactcttgctgaatatgttctg 1486 Query: 604 cagggcacccacataaacagccgcaagaagaggggtcataccccacgtggcaagca 659 || |||||||||||||| || ||||||||||||||||| ||| |||||||||| Sbjct: 1485 aagtgcacccacataaactgctgcaagaagaggggtcatgcccattgtggcaagca 1430 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 163 tggagatgagtttgatggtga 183 ||||||||||||||||||||| Sbjct: 1926 tggagatgagtttgatggtga 1906
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 192 bits (97), Expect = 1e-45 Identities = 181/209 (86%) Strand = Plus / Plus Query: 307 gagatcctctttggccaagcttgagaattgcttgtccaatgatcttgccgcacctagcca 366 |||||| || || |||||||| |||||||||||||| | ||| |||||||| |||||||| Sbjct: 26072134 gagatcttccttagccaagctagagaattgcttgtctagtgaacttgccgcgcctagcca 26072193 Query: 367 tgcaagcacgatgaccaacagtataccgccaaggtagggcgtcgagtttgccaaagagcc 426 ||| || || || ||||||||||| || ||||||||||| || ||||| || |||||||| Sbjct: 26072194 tgctagaacaatcaccaacagtatgccaccaaggtagggggtggagttagctaaagagcc 26072253 Query: 427 aaatatcaggatcagaaactgttggatcagcgcaccaccggacttgcccaatgggttgca 486 |||| | ||||||| |||||||| || || || ||||| ||||| |||||||||||||| Sbjct: 26072254 aaatgtaaggatcatgaactgttgaataagagctccaccagacttccccaatgggttgca 26072313 Query: 487 gacaacatcaatggctgcctttcccttca 515 ||||||||||||||||||||||||||||| Sbjct: 26072314 gacaacatcaatggctgcctttcccttca 26072342 Score = 165 bits (83), Expect = 2e-37 Identities = 128/143 (89%) Strand = Plus / Plus Query: 517 cttcatatctccatccaaaggaatataggccatttctttgcacgggtcgaataaactgta 576 |||||||||| ||||||||||||| ||||||||||||||||| || || |||||||| || Sbjct: 26072792 cttcatatcttcatccaaaggaatgtaggccatttctttgcatggatcaaataaactata 26072851 Query: 577 ctttgcactcttgctaaatatgttctgcagggcacccacataaacagccgcaagaagagg 636 ||||||||||||||| ||||||||||| || |||||||||||||| || ||||||||||| Sbjct: 26072852 ctttgcactcttgctgaatatgttctgaagtgcacccacataaactgctgcaagaagagg 26072911 Query: 637 ggtcataccccacgtggcaagca 659 |||||| ||| |||||||||| Sbjct: 26072912 ggtcatgcccattgtggcaagca 26072934 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 163 tggagatgagtttgatggtga 183 ||||||||||||||||||||| Sbjct: 26071993 tggagatgagtttgatggtga 26072013
>dbj|AP002910.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0707D10 Length = 172003 Score = 192 bits (97), Expect = 1e-45 Identities = 181/209 (86%) Strand = Plus / Plus Query: 307 gagatcctctttggccaagcttgagaattgcttgtccaatgatcttgccgcacctagcca 366 |||||| || || |||||||| |||||||||||||| | ||| |||||||| |||||||| Sbjct: 168201 gagatcttccttagccaagctagagaattgcttgtctagtgaacttgccgcgcctagcca 168260 Query: 367 tgcaagcacgatgaccaacagtataccgccaaggtagggcgtcgagtttgccaaagagcc 426 ||| || || || ||||||||||| || ||||||||||| || ||||| || |||||||| Sbjct: 168261 tgctagaacaatcaccaacagtatgccaccaaggtagggggtggagttagctaaagagcc 168320 Query: 427 aaatatcaggatcagaaactgttggatcagcgcaccaccggacttgcccaatgggttgca 486 |||| | ||||||| |||||||| || || || ||||| ||||| |||||||||||||| Sbjct: 168321 aaatgtaaggatcatgaactgttgaataagagctccaccagacttccccaatgggttgca 168380 Query: 487 gacaacatcaatggctgcctttcccttca 515 ||||||||||||||||||||||||||||| Sbjct: 168381 gacaacatcaatggctgcctttcccttca 168409 Score = 165 bits (83), Expect = 2e-37 Identities = 128/143 (89%) Strand = Plus / Plus Query: 517 cttcatatctccatccaaaggaatataggccatttctttgcacgggtcgaataaactgta 576 |||||||||| ||||||||||||| ||||||||||||||||| || || |||||||| || Sbjct: 168859 cttcatatcttcatccaaaggaatgtaggccatttctttgcatggatcaaataaactata 168918 Query: 577 ctttgcactcttgctaaatatgttctgcagggcacccacataaacagccgcaagaagagg 636 ||||||||||||||| ||||||||||| || |||||||||||||| || ||||||||||| Sbjct: 168919 ctttgcactcttgctgaatatgttctgaagtgcacccacataaactgctgcaagaagagg 168978 Query: 637 ggtcataccccacgtggcaagca 659 |||||| ||| |||||||||| Sbjct: 168979 ggtcatgcccattgtggcaagca 169001 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 163 tggagatgagtttgatggtga 183 ||||||||||||||||||||| Sbjct: 168060 tggagatgagtttgatggtga 168080
>dbj|AP003234.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0038D11 Length = 156465 Score = 192 bits (97), Expect = 1e-45 Identities = 181/209 (86%) Strand = Plus / Plus Query: 307 gagatcctctttggccaagcttgagaattgcttgtccaatgatcttgccgcacctagcca 366 |||||| || || |||||||| |||||||||||||| | ||| |||||||| |||||||| Sbjct: 75709 gagatcttccttagccaagctagagaattgcttgtctagtgaacttgccgcgcctagcca 75768 Query: 367 tgcaagcacgatgaccaacagtataccgccaaggtagggcgtcgagtttgccaaagagcc 426 ||| || || || ||||||||||| || ||||||||||| || ||||| || |||||||| Sbjct: 75769 tgctagaacaatcaccaacagtatgccaccaaggtagggggtggagttagctaaagagcc 75828 Query: 427 aaatatcaggatcagaaactgttggatcagcgcaccaccggacttgcccaatgggttgca 486 |||| | ||||||| |||||||| || || || ||||| ||||| |||||||||||||| Sbjct: 75829 aaatgtaaggatcatgaactgttgaataagagctccaccagacttccccaatgggttgca 75888 Query: 487 gacaacatcaatggctgcctttcccttca 515 ||||||||||||||||||||||||||||| Sbjct: 75889 gacaacatcaatggctgcctttcccttca 75917 Score = 165 bits (83), Expect = 2e-37 Identities = 128/143 (89%) Strand = Plus / Plus Query: 517 cttcatatctccatccaaaggaatataggccatttctttgcacgggtcgaataaactgta 576 |||||||||| ||||||||||||| ||||||||||||||||| || || |||||||| || Sbjct: 76367 cttcatatcttcatccaaaggaatgtaggccatttctttgcatggatcaaataaactata 76426 Query: 577 ctttgcactcttgctaaatatgttctgcagggcacccacataaacagccgcaagaagagg 636 ||||||||||||||| ||||||||||| || |||||||||||||| || ||||||||||| Sbjct: 76427 ctttgcactcttgctgaatatgttctgaagtgcacccacataaactgctgcaagaagagg 76486 Query: 637 ggtcataccccacgtggcaagca 659 |||||| ||| |||||||||| Sbjct: 76487 ggtcatgcccattgtggcaagca 76509 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 163 tggagatgagtttgatggtga 183 ||||||||||||||||||||| Sbjct: 75568 tggagatgagtttgatggtga 75588
>gb|AY864675.1| Oryza sativa (japonica cultivar-group) plastid ATP/ADP transporter gene, complete cds; nuclear gene for plastid product Length = 3842 Score = 192 bits (97), Expect = 1e-45 Identities = 181/209 (86%) Strand = Plus / Minus Query: 307 gagatcctctttggccaagcttgagaattgcttgtccaatgatcttgccgcacctagcca 366 |||||| || || |||||||| |||||||||||||| | ||| |||||||| |||||||| Sbjct: 3692 gagatcttccttagccaagctagagaattgcttgtctagtgaacttgccgcgcctagcca 3633 Query: 367 tgcaagcacgatgaccaacagtataccgccaaggtagggcgtcgagtttgccaaagagcc 426 ||| || || || ||||||||||| || ||||||||||| || ||||| || |||||||| Sbjct: 3632 tgctagaacaatcaccaacagtatgccaccaaggtagggggtggagttagctaaagagcc 3573 Query: 427 aaatatcaggatcagaaactgttggatcagcgcaccaccggacttgcccaatgggttgca 486 |||| | ||||||| |||||||| || || || ||||| ||||| |||||||||||||| Sbjct: 3572 aaatgtaaggatcatgaactgttgaataagagctccaccagacttccccaatgggttgca 3513 Query: 487 gacaacatcaatggctgcctttcccttca 515 ||||||||||||||||||||||||||||| Sbjct: 3512 gacaacatcaatggctgcctttcccttca 3484 Score = 165 bits (83), Expect = 2e-37 Identities = 128/143 (89%) Strand = Plus / Minus Query: 517 cttcatatctccatccaaaggaatataggccatttctttgcacgggtcgaataaactgta 576 |||||||||| ||||||||||||| ||||||||||||||||| || || |||||||| || Sbjct: 3034 cttcatatcttcatccaaaggaatgtaggccatttctttgcatggatcaaataaactata 2975 Query: 577 ctttgcactcttgctaaatatgttctgcagggcacccacataaacagccgcaagaagagg 636 ||||||||||||||| ||||||||||| || |||||||||||||| || ||||||||||| Sbjct: 2974 ctttgcactcttgctgaatatgttctgaagtgcacccacataaactgctgcaagaagagg 2915 Query: 637 ggtcataccccacgtggcaagca 659 |||||| ||| |||||||||| Sbjct: 2914 ggtcatgcccattgtggcaagca 2892 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 163 tggagatgagtttgatggtga 183 ||||||||||||||||||||| Sbjct: 3833 tggagatgagtttgatggtga 3813
>gb|AF416339.1|AF416339 Medicago sativa ADP/ATP translocase mRNA, partial cds Length = 317 Score = 163 bits (82), Expect = 9e-37 Identities = 157/182 (86%) Strand = Plus / Minus Query: 443 aactgttggatcagcgcaccaccggacttgcccaatgggttgcagacaacatcaatggct 502 ||||||||||| || || || || || || |||||||||||||| ||||||||||||||| Sbjct: 228 aactgttggataagggctcctccagatttacccaatgggttgcaaacaacatcaatggct 169 Query: 503 gcctttcccttcaacttcatatctccatccaaaggaatataggccatttctttgcacggg 562 || || ||||| | ||| |||| ||||||| ||||| || |||||||||||||| || Sbjct: 168 gctttccccttgaccttagtatcctcatccaagggaatgtaagccatttctttgcaggga 109 Query: 563 tcgaataaactgtactttgcactcttgctaaatatgttctgcagggcacccacataaaca 622 ||||||||||||||||| ||||||||||||||||||||||||| |||||| ||||| ||| Sbjct: 108 tcgaataaactgtacttagcactcttgctaaatatgttctgcatggcaccaacatataca 49 Query: 623 gc 624 || Sbjct: 48 gc 47
>gb|AY107360.1| Zea mays PCO098455 mRNA sequence Length = 1866 Score = 149 bits (75), Expect = 1e-32 Identities = 225/275 (81%) Strand = Plus / Minus Query: 356 gcacctagccatgcaagcacgatgaccaacagtataccgccaaggtagggcgtcgagttt 415 ||||| ||||||||||| || || |||| ||||| |||||||||||||| |||||||| Sbjct: 1285 gcacccagccatgcaaggacaatcaccaggagtattccgccaaggtagggtgtcgagttc 1226 Query: 416 gccaaagagccaaatatcaggatcagaaactgttggatcagcgcaccaccggacttgccc 475 || | ||| |||||| |||||||| ||||| |||||||| ||||| || || || ||| Sbjct: 1225 gcgagagaaccaaatgacaggatcatgaactgctggatcagagcacctccagatttcccc 1166 Query: 476 aatgggttgcagacaacatcaatggctgcctttcccttcaacttcatatctccatccaaa 535 || |||||||| ||||||||||| || || || || |||| ||||||||| |||||||| Sbjct: 1165 aaggggttgcacacaacatcaatagccgctttacctttcaccttcatatcctcatccaaa 1106 Query: 536 ggaatataggccatttctttgcacgggtcgaataaactgtactttgcactcttgctaaat 595 ||||| || ||||| |||||||| || || || | |||||| ||||||||||| || || Sbjct: 1105 ggaatgtatgccatctctttgcaaggatcaaacagactgtattttgcactcttactgaaa 1046 Query: 596 atgttctgcagggcacccacataaacagccgcaag 630 |||||||||| || || ||||| || |||||||| Sbjct: 1045 atgttctgcattgctccaacatagactgccgcaag 1011
>gb|BT024163.1| Zea mays clone EL01N0429C01 mRNA sequence Length = 1204 Score = 141 bits (71), Expect = 3e-30 Identities = 224/275 (81%) Strand = Plus / Minus Query: 356 gcacctagccatgcaagcacgatgaccaacagtataccgccaaggtagggcgtcgagttt 415 ||||| |||||||| || ||||| |||| ||||| |||||||||||||| |||||||| Sbjct: 742 gcacccagccatgcgaggacgatcaccaggagtattccgccaaggtagggtgtcgagttc 683 Query: 416 gccaaagagccaaatatcaggatcagaaactgttggatcagcgcaccaccggacttgccc 475 || | ||| || ||| |||||||| ||||| |||||||| ||||| || || || ||| Sbjct: 682 gcgagagatccgaatgacaggatcatgaactgctggatcagagcacctccagatttcccc 623 Query: 476 aatgggttgcagacaacatcaatggctgcctttcccttcaacttcatatctccatccaaa 535 || |||||||| ||||||||||| || || || || |||| ||||||||| |||||||| Sbjct: 622 aaggggttgcacacaacatcaatagccgctttacctttcaccttcatatcctcatccaaa 563 Query: 536 ggaatataggccatttctttgcacgggtcgaataaactgtactttgcactcttgctaaat 595 ||||| || ||||| |||||||| || || || | |||||| ||||||||||| || || Sbjct: 562 ggaatgtatgccatctctttgcaaggatcaaacagactgtattttgcactcttactgaaa 503 Query: 596 atgttctgcagggcacccacataaacagccgcaag 630 |||||||||| || || ||||| || |||||||| Sbjct: 502 atgttctgcattgctccaacatagactgccgcaag 468
>emb|Y10821.1|STPLATDTR Solanum tuberosum mRNA for plastidic ATP/ADP-transporter Length = 2300 Score = 127 bits (64), Expect = 5e-26 Identities = 148/176 (84%) Strand = Plus / Minus Query: 467 gacttgcccaatgggttgcagacaacatcaatggctgcctttcccttcaacttcatatct 526 ||||| |||| ||| |||||||||||||| || |||||||| || || | ||| | || Sbjct: 1706 gactttcccagtggattgcagacaacatcgattgctgccttccctttaaccttggtgtcc 1647 Query: 527 ccatccaaaggaatataggccatttctttgcacgggtcgaataaactgtactttgcactc 586 ||||||||||||| ||||||||||||||||| ||||| || ||||| |||||||||||| Sbjct: 1646 tcatccaaaggaatgtaggccatttctttgcaggggtcaaacaaactatactttgcactc 1587 Query: 587 ttgctaaatatgttctgcagggcacccacataaacagccgcaagaagaggggtcat 642 || || || |||||||||| ||||||||||| ||||| || |||||||| ||||| Sbjct: 1586 ttactgaaaatgttctgcattgcacccacatagacagctgctagaagaggagtcat 1531
>gb|AY587008.1| Helianthus tuberosus chloroplast ATP/ADP transporter protein (AAT) mRNA, complete cds; nuclear gene for chloroplast product Length = 1464 Score = 115 bits (58), Expect = 2e-22 Identities = 232/290 (80%) Strand = Plus / Minus Query: 338 ttgtccaatgatcttgccgcacctagccatgcaagcacgatgaccaacagtataccgcca 397 |||||||||||||| || ||||||| |||||| ||| || || | ||| | ||||||| Sbjct: 1313 ttgtccaatgatctagcggcacctaaccatgctcccacaatcactagcagcacaccgcca 1254 Query: 398 aggtagggcgtcgagtttgccaaagagccaaatatcaggatcagaaactgttggatcagc 457 ||||| ||||| |||||||| | || || ||| | | ||||| ||| ||||| || || Sbjct: 1253 aggtatggcgttgagtttgcaagtgacccgaatgttaagatcataaattgttgaattaga 1194 Query: 458 gcaccaccggacttgcccaatgggttgcagacaacatcaatggctgcctttcccttcaac 517 || ||||| || || || || |||||||| ||||| || || || ||||| || || | | Sbjct: 1193 gccccacccgatttacctaacgggttgcacacaacgtctattgccgccttacctttaacc 1134 Query: 518 ttcatatctccatccaaaggaatataggccatttctttgcacgggtcgaataaactgtac 577 || | ||| |||||||||||||||| |||||||||||||| || || || ||||| ||| Sbjct: 1133 ttggtgtcttcatccaaaggaatatatgccatttctttgcaaggatcaaacaaactatac 1074 Query: 578 tttgcactcttgctaaatatgttctgcagggcacccacataaacagccgc 627 |||||||| |||||||||||||| |||| ||||| |||||||| ||||| Sbjct: 1073 tttgcacttttgctaaatatgttttgcattgcaccgacataaaccgccgc 1024
>ref|NM_106679.2| Arabidopsis thaliana ATP:ADP antiporter AT1G80300 mRNA, complete cds Length = 2212 Score = 107 bits (54), Expect = 5e-20 Identities = 102/118 (86%) Strand = Plus / Minus Query: 528 catccaaaggaatataggccatttctttgcacgggtcgaataaactgtactttgcactct 587 ||||||| || |||||||||||||||||||| |||||||| || |||||||| ||||||| Sbjct: 1623 catccaatgggatataggccatttctttgcaagggtcgaacaagctgtacttggcactct 1564 Query: 588 tgctaaatatgttctgcagggcacccacataaacagccgcaagaagaggggtcatacc 645 |||| || || ||||| |||||||| ||||| ||||| ||||| || || |||||||| Sbjct: 1563 tgctgaagatattctgaagggcaccgacatacacagctgcaagtagcggtgtcatacc 1506
>gb|AY098893.1| Citrus hybrid cultivar plastidic ATP/ADP transporter mRNA, partial cds; nuclear gene for plastid product Length = 2122 Score = 107 bits (54), Expect = 5e-20 Identities = 141/170 (82%) Strand = Plus / Minus Query: 473 cccaatgggttgcagacaacatcaatggctgcctttcccttcaacttcatatctccatcc 532 ||||| |||||||| |||||||| ||||||||||| || || | ||| | ||| |||| Sbjct: 1495 cccaacgggttgcacacaacatcgatggctgccttccctttaaccttggtgtcttcatct 1436 Query: 533 aaaggaatataggccatttctttgcacgggtcgaataaactgtactttgcactcttgcta 592 || ||||| ||||||||||||||||| || || || || |||||||| |||||||| || Sbjct: 1435 aatggaatgtaggccatttctttgcaaggatcaaacaagctgtacttggcactcttactg 1376 Query: 593 aatatgttctgcagggcacccacataaacagccgcaagaagaggggtcat 642 || || || |||| |||||||||||| ||||| ||||||||||| ||||| Sbjct: 1375 aaaatattttgcatggcacccacatatacagcagcaagaagaggagtcat 1326
>gb|AY045903.1| Arabidopsis thaliana putative adenine nucleotide translocase (At1g80300) mRNA, complete cds Length = 2151 Score = 107 bits (54), Expect = 5e-20 Identities = 102/118 (86%) Strand = Plus / Minus Query: 528 catccaaaggaatataggccatttctttgcacgggtcgaataaactgtactttgcactct 587 ||||||| || |||||||||||||||||||| |||||||| || |||||||| ||||||| Sbjct: 1552 catccaatgggatataggccatttctttgcaagggtcgaacaagctgtacttggcactct 1493 Query: 588 tgctaaatatgttctgcagggcacccacataaacagccgcaagaagaggggtcatacc 645 |||| || || ||||| |||||||| ||||| ||||| ||||| || || |||||||| Sbjct: 1492 tgctgaagatattctgaagggcaccgacatacacagctgcaagtagcggtgtcatacc 1435
>gb|AF428316.1|AF428316 Arabidopsis thaliana At1g80300/F5I6_5 mRNA, complete cds Length = 2110 Score = 107 bits (54), Expect = 5e-20 Identities = 102/118 (86%) Strand = Plus / Minus Query: 528 catccaaaggaatataggccatttctttgcacgggtcgaataaactgtactttgcactct 587 ||||||| || |||||||||||||||||||| |||||||| || |||||||| ||||||| Sbjct: 1580 catccaatgggatataggccatttctttgcaagggtcgaacaagctgtacttggcactct 1521 Query: 588 tgctaaatatgttctgcagggcacccacataaacagccgcaagaagaggggtcatacc 645 |||| || || ||||| |||||||| ||||| ||||| ||||| || || |||||||| Sbjct: 1520 tgctgaagatattctgaagggcaccgacatacacagctgcaagtagcggtgtcatacc 1463
>dbj|AK221188.1| Arabidopsis thaliana mRNA for adenine nucleotide translocase, complete cds, clone: RAFL22-99-C21 Length = 884 Score = 107 bits (54), Expect = 5e-20 Identities = 102/118 (86%) Strand = Plus / Minus Query: 528 catccaaaggaatataggccatttctttgcacgggtcgaataaactgtactttgcactct 587 ||||||| || |||||||||||||||||||| |||||||| || |||||||| ||||||| Sbjct: 287 catccaatgggatataggccatttctttgcaagggtcgaacaagctgtacttggcactct 228 Query: 588 tgctaaatatgttctgcagggcacccacataaacagccgcaagaagaggggtcatacc 645 |||| || || ||||| |||||||| ||||| ||||| ||||| || || |||||||| Sbjct: 227 tgctgaagatattctgaagggcaccgacatacacagctgcaagtagcggtgtcatacc 170
>gb|AC018848.6|AC018848 Arabidopsis thaliana chromosome 1 BAC F5I6 genomic sequence, complete sequence Length = 132990 Score = 107 bits (54), Expect = 5e-20 Identities = 102/118 (86%) Strand = Plus / Minus Query: 528 catccaaaggaatataggccatttctttgcacgggtcgaataaactgtactttgcactct 587 ||||||| || |||||||||||||||||||| |||||||| || |||||||| ||||||| Sbjct: 21371 catccaatgggatataggccatttctttgcaagggtcgaacaagctgtacttggcactct 21312 Query: 588 tgctaaatatgttctgcagggcacccacataaacagccgcaagaagaggggtcatacc 645 |||| || || ||||| |||||||| ||||| ||||| ||||| || || |||||||| Sbjct: 21311 tgctgaagatattctgaagggcaccgacatacacagctgcaagtagcggtgtcatacc 21254
>emb|Z49227.2|ATANTMR A.thaliana mRNA for adenine nucleotide translocase Length = 2181 Score = 107 bits (54), Expect = 5e-20 Identities = 102/118 (86%) Strand = Plus / Minus Query: 528 catccaaaggaatataggccatttctttgcacgggtcgaataaactgtactttgcactct 587 ||||||| || |||||||||||||||||||| |||||||| || |||||||| ||||||| Sbjct: 1631 catccaatgggatataggccatttctttgcaagggtcgaacaagctgtacttggcactct 1572 Query: 588 tgctaaatatgttctgcagggcacccacataaacagccgcaagaagaggggtcatacc 645 |||| || || ||||| |||||||| ||||| ||||| ||||| || || |||||||| Sbjct: 1571 tgctgaagatattctgaagggcaccgacatacacagctgcaagtagcggtgtcatacc 1514
>dbj|AK103738.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033138K07, full insert sequence Length = 3222 Score = 107 bits (54), Expect = 5e-20 Identities = 84/94 (89%) Strand = Plus / Minus Query: 566 aataaactgtactttgcactcttgctaaatatgttctgcagggcacccacataaacagcc 625 |||||||| ||||||||||||||||| ||||||||||| || |||||||||||||| || Sbjct: 1596 aataaactatactttgcactcttgctgaatatgttctgaagtgcacccacataaactgct 1537 Query: 626 gcaagaagaggggtcataccccacgtggcaagca 659 ||||||||||||||||| ||| |||||||||| Sbjct: 1536 gcaagaagaggggtcatgcccattgtggcaagca 1503
>gb|AY571964.1| Helianthus tuberosus plastidic ATP/ADP transporter (AATP) gene, complete cds; nuclear gene for plastid product Length = 4462 Score = 103 bits (52), Expect = 8e-19 Identities = 97/112 (86%) Strand = Plus / Minus Query: 528 catccaaaggaatataggccatttctttgcacgggtcgaataaactgtactttgcactct 587 |||||||||||||||| |||||||||||||| || || || ||||| ||||||||||| | Sbjct: 3517 catccaaaggaatatatgccatttctttgcaaggatcaaacaaactatactttgcacttt 3458 Query: 588 tgctaaatatgttctgcagggcacccacataaacagccgcaagaagaggggt 639 |||||||||| || |||| ||||| |||||||| ||||| ||||| ||||| Sbjct: 3457 tgctaaatatattttgcattgcaccgacataaaccgccgctagaagtggggt 3406 Score = 40.1 bits (20), Expect = 9.4 Identities = 65/80 (81%) Strand = Plus / Minus Query: 338 ttgtccaatgatcttgccgcacctagccatgcaagcacgatgaccaacagtataccgcca 397 |||||||| ||||| || ||||||| |||||| ||| || || | ||| | ||||||| Sbjct: 4311 ttgtccaacgatctagcggcacctaaccatgctcccacaatcactagcagcacaccgcca 4252 Query: 398 aggtagggcgtcgagtttgc 417 ||||| ||||| |||||||| Sbjct: 4251 aggtatggcgttgagtttgc 4232
>ref|XM_464574.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1893 Score = 101 bits (51), Expect = 3e-18 Identities = 117/139 (84%) Strand = Plus / Minus Query: 467 gacttgcccaatgggttgcagacaacatcaatggctgcctttcccttcaacttcatatct 526 ||||| ||||||||||||||||| |||||||| |||||||| || || | |||||| || Sbjct: 1553 gacttccccaatgggttgcagaccacatcaattgctgccttacctttgaccttcatgtcc 1494 Query: 527 ccatccaaaggaatataggccatttctttgcacgggtcgaataaactgtactttgcactc 586 | ||||||||||| || |||||||| || || ||||| || ||||||||||| |||||| Sbjct: 1493 tcgtccaaaggaatgtatgccatttccttacaagggtcaaacaaactgtacttcgcactc 1434 Query: 587 ttgctaaatatgttctgca 605 || || || |||||||||| Sbjct: 1433 ttactgaaaatgttctgca 1415
>emb|AJ539075.1|NTA539075 Nicotiana tabacum cDNA-AFLP-fragment BT44-M2-009 Length = 225 Score = 97.6 bits (49), Expect = 5e-17 Identities = 97/113 (85%) Strand = Plus / Minus Query: 530 tccaaaggaatataggccatttctttgcacgggtcgaataaactgtactttgcactcttg 589 ||||||||||| |||||||| |||||||| || || || ||||||||||| |||||||| Sbjct: 207 tccaaaggaatgtaggccatctctttgcaaggatcaaacaaactgtacttcgcactctta 148 Query: 590 ctaaatatgttctgcagggcacccacataaacagccgcaagaagaggggtcat 642 || || |||||||||| ||||||||||| ||||| || |||||||| ||||| Sbjct: 147 ctgaaaatgttctgcattgcacccacatagacagctgctagaagaggagtcat 95
>dbj|AB190777.1| Mesembryanthemum crystallinum ANT1 mRNA for putative plastidic adenylate transporter, complete cds Length = 2490 Score = 91.7 bits (46), Expect = 3e-15 Identities = 130/158 (82%) Strand = Plus / Minus Query: 479 gggttgcagacaacatcaatggctgcctttcccttcaacttcatatctccatccaaagga 538 |||||||| || || |||||||||||||| ||||| | ||| | || ||||||| ||| Sbjct: 1831 gggttgcaaacgacgtcaatggctgccttccccttaaccttagtgtcctcatccaatgga 1772 Query: 539 atataggccatttctttgcacgggtcgaataaactgtactttgcactcttgctaaatatg 598 || || |||||||||||||| || || || ||||||||||| ||||||||||| || ||| Sbjct: 1771 atgtaagccatttctttgcaaggatcaaacaaactgtacttggcactcttgctgaaaatg 1712 Query: 599 ttctgcagggcacccacataaacagccgcaagaagagg 636 || |||| |||||| ||||| || || || |||||||| Sbjct: 1711 ttttgcatggcaccaacatatactgctgctagaagagg 1674
>ref|NM_101419.2| Arabidopsis thaliana ATP:ADP antiporter AT1G15500 mRNA, complete cds Length = 2179 Score = 85.7 bits (43), Expect = 2e-13 Identities = 145/179 (81%) Strand = Plus / Minus Query: 434 aggatcagaaactgttggatcagcgcaccaccggacttgcccaatgggttgcagacaaca 493 ||||||| ||||| ||||| || ||||| || || || ||||||||||||||||| ||| Sbjct: 1746 aggatcatgaactgctggattagagcaccgcctgatttccccaatgggttgcagaccaca 1687 Query: 494 tcaatggctgcctttcccttcaacttcatatctccatccaaaggaatataggccatttct 553 ||||| || || || || || | ||| | || ||||||| || ||||| ||||||||| Sbjct: 1686 tcaattgcagctttgcctttaaccttggtgtcctcatccaatgggatataagccatttct 1627 Query: 554 ttgcacgggtcgaataaactgtactttgcactcttgctaaatatgttctgcagggcacc 612 ||||| || ||||| || |||||||| ||||||||||| || || ||||| |||||||| Sbjct: 1626 ttgcaaggatcgaacaagctgtacttggcactcttgctgaagatattctggagggcacc 1568
>gb|AY128844.1| Arabidopsis thaliana putative adenine nucleotide translocase (At1g15500) mRNA, complete cds Length = 1896 Score = 85.7 bits (43), Expect = 2e-13 Identities = 145/179 (81%) Strand = Plus / Minus Query: 434 aggatcagaaactgttggatcagcgcaccaccggacttgcccaatgggttgcagacaaca 493 ||||||| ||||| ||||| || ||||| || || || ||||||||||||||||| ||| Sbjct: 1610 aggatcatgaactgctggattagagcaccgcctgatttccccaatgggttgcagaccaca 1551 Query: 494 tcaatggctgcctttcccttcaacttcatatctccatccaaaggaatataggccatttct 553 ||||| || || || || || | ||| | || ||||||| || ||||| ||||||||| Sbjct: 1550 tcaattgcagctttgcctttaaccttggtgtcctcatccaatgggatataagccatttct 1491 Query: 554 ttgcacgggtcgaataaactgtactttgcactcttgctaaatatgttctgcagggcacc 612 ||||| || ||||| || |||||||| ||||||||||| || || ||||| |||||||| Sbjct: 1490 ttgcaaggatcgaacaagctgtacttggcactcttgctgaagatattctggagggcacc 1432
>gb|AY081350.1| Arabidopsis thaliana putative adenine nucleotide translocase (At1g15500) mRNA, complete cds Length = 2090 Score = 85.7 bits (43), Expect = 2e-13 Identities = 145/179 (81%) Strand = Plus / Minus Query: 434 aggatcagaaactgttggatcagcgcaccaccggacttgcccaatgggttgcagacaaca 493 ||||||| ||||| ||||| || ||||| || || || ||||||||||||||||| ||| Sbjct: 1746 aggatcatgaactgctggattagagcaccgcctgatttccccaatgggttgcagaccaca 1687 Query: 494 tcaatggctgcctttcccttcaacttcatatctccatccaaaggaatataggccatttct 553 ||||| || || || || || | ||| | || ||||||| || ||||| ||||||||| Sbjct: 1686 tcaattgcagctttgcctttaaccttggtgtcctcatccaatgggatataagccatttct 1627 Query: 554 ttgcacgggtcgaataaactgtactttgcactcttgctaaatatgttctgcagggcacc 612 ||||| || ||||| || |||||||| ||||||||||| || || ||||| |||||||| Sbjct: 1626 ttgcaaggatcgaacaagctgtacttggcactcttgctgaagatattctggagggcacc 1568
>gb|AY084374.1| Arabidopsis thaliana clone 105967 mRNA, complete sequence Length = 2146 Score = 85.7 bits (43), Expect = 2e-13 Identities = 145/179 (81%) Strand = Plus / Minus Query: 434 aggatcagaaactgttggatcagcgcaccaccggacttgcccaatgggttgcagacaaca 493 ||||||| ||||| ||||| || ||||| || || || ||||||||||||||||| ||| Sbjct: 1722 aggatcatgaactgctggattagagcaccgcctgatttccccaatgggttgcagaccaca 1663 Query: 494 tcaatggctgcctttcccttcaacttcatatctccatccaaaggaatataggccatttct 553 ||||| || || || || || | ||| | || ||||||| || ||||| ||||||||| Sbjct: 1662 tcaattgcagctttgcctttaaccttggtgtcctcatccaatgggatataagccatttct 1603 Query: 554 ttgcacgggtcgaataaactgtactttgcactcttgctaaatatgttctgcagggcacc 612 ||||| || ||||| || |||||||| ||||||||||| || || ||||| |||||||| Sbjct: 1602 ttgcaaggatcgaacaagctgtacttggcactcttgctgaagatattctggagggcacc 1544
>gb|AC013453.1|AC013453 Arabidopsis thaliana chromosome I BAC T16N11 genomic sequence, complete sequence Length = 91001 Score = 73.8 bits (37), Expect = 7e-10 Identities = 73/85 (85%) Strand = Plus / Minus Query: 528 catccaaaggaatataggccatttctttgcacgggtcgaataaactgtactttgcactct 587 ||||||| || ||||| |||||||||||||| || ||||| || |||||||| ||||||| Sbjct: 31636 catccaatgggatataagccatttctttgcaaggatcgaacaagctgtacttggcactct 31577 Query: 588 tgctaaatatgttctgcagggcacc 612 |||| || || ||||| |||||||| Sbjct: 31576 tgctgaagatattctggagggcacc 31552 Score = 50.1 bits (25), Expect = 0.010 Identities = 55/65 (84%) Strand = Plus / Minus Query: 434 aggatcagaaactgttggatcagcgcaccaccggacttgcccaatgggttgcagacaaca 493 ||||||| ||||| ||||| || ||||| || || || ||||||||||||||||| ||| Sbjct: 31815 aggatcatgaactgctggattagagcaccgcctgatttccccaatgggttgcagaccaca 31756 Query: 494 tcaat 498 ||||| Sbjct: 31755 tcaat 31751
>dbj|AK110483.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-167-A10, full insert sequence Length = 3115 Score = 69.9 bits (35), Expect = 1e-08 Identities = 62/71 (87%) Strand = Plus / Minus Query: 443 aactgttggatcagcgcaccaccggacttgcccaatgggttgcagacaacatcaatggct 502 ||||| |||||||| ||||||||||||||| ||| |||||||||| ||||||||||| Sbjct: 1587 aactgctggatcagggcaccaccggacttgtccagggggttgcagatcacatcaatggcg 1528 Query: 503 gcctttccctt 513 ||||| ||||| Sbjct: 1527 gccttaccctt 1517
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 63.9 bits (32), Expect = 6e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 530 tccaaaggaatataggccatttctttgcacgggtcgaataaactgtactttgcactcttg 589 ||||||||||| || |||||||| || || ||||| || ||||||||||| |||||||| Sbjct: 6058178 tccaaaggaatgtatgccatttccttacaagggtcaaacaaactgtacttcgcactctta 6058119 Query: 590 ctaaatatgttctgca 605 || || |||||||||| Sbjct: 6058118 ctgaaaatgttctgca 6058103 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 467 gacttgcccaatgggttgcagacaacatcaatggctgcctt 507 ||||| ||||||||||||||||| |||||||| |||||||| Sbjct: 6058762 gacttccccaatgggttgcagaccacatcaattgctgcctt 6058722
>dbj|AP003977.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1006_A02 Length = 175153 Score = 63.9 bits (32), Expect = 6e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 530 tccaaaggaatataggccatttctttgcacgggtcgaataaactgtactttgcactcttg 589 ||||||||||| || |||||||| || || ||||| || ||||||||||| |||||||| Sbjct: 23660 tccaaaggaatgtatgccatttccttacaagggtcaaacaaactgtacttcgcactctta 23601 Query: 590 ctaaatatgttctgca 605 || || |||||||||| Sbjct: 23600 ctgaaaatgttctgca 23585 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 467 gacttgcccaatgggttgcagacaacatcaatggctgcctt 507 ||||| ||||||||||||||||| |||||||| |||||||| Sbjct: 24244 gacttccccaatgggttgcagaccacatcaattgctgcctt 24204
>dbj|AP003974.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1003_F05 Length = 147472 Score = 63.9 bits (32), Expect = 6e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 530 tccaaaggaatataggccatttctttgcacgggtcgaataaactgtactttgcactcttg 589 ||||||||||| || |||||||| || || ||||| || ||||||||||| |||||||| Sbjct: 79017 tccaaaggaatgtatgccatttccttacaagggtcaaacaaactgtacttcgcactctta 78958 Query: 590 ctaaatatgttctgca 605 || || |||||||||| Sbjct: 78957 ctgaaaatgttctgca 78942 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 467 gacttgcccaatgggttgcagacaacatcaatggctgcctt 507 ||||| ||||||||||||||||| |||||||| |||||||| Sbjct: 79601 gacttccccaatgggttgcagaccacatcaattgctgcctt 79561
>dbj|AP006861.1| Chlamydophila felis Fe/C-56 DNA, complete genome Length = 1166239 Score = 48.1 bits (24), Expect = 0.038 Identities = 27/28 (96%) Strand = Plus / Minus Query: 529 atccaaaggaatataggccatttctttg 556 |||||| ||||||||||||||||||||| Sbjct: 672282 atccaatggaatataggccatttctttg 672255
>gb|AC114984.18| Mus musculus chromosome 18, clone RP23-248F9, complete sequence Length = 185563 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Minus Query: 82 cttcatcattatttctgctcaacata 107 ||||||||||||||||||| |||||| Sbjct: 70009 cttcatcattatttctgcttaacata 69984
>gb|AC132357.3| Mus musculus BAC clone RP24-120G2 from chromosome 18, complete sequence Length = 189088 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 82 cttcatcattatttctgctcaacata 107 ||||||||||||||||||| |||||| Sbjct: 90317 cttcatcattatttctgcttaacata 90342
>gb|AC164154.2| Mus musculus chromosome 18, clone RP23-60G12, complete sequence Length = 238662 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 82 cttcatcattatttctgctcaacata 107 ||||||||||||||||||| |||||| Sbjct: 58759 cttcatcattatttctgcttaacata 58784
>gb|CP000057.1| Haemophilus influenzae strain 86-028NP, complete genome Length = 1913428 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 56 aatttggaagaaatcgccaat 76 ||||||||||||||||||||| Sbjct: 1609356 aatttggaagaaatcgccaat 1609336
>gb|AC005593.1| Homo sapiens chromosome 5, P1 clone 1369f10 (LBNL H28), complete sequence Length = 83666 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 157 ttgagctggagatgagtttga 177 ||||||||||||||||||||| Sbjct: 74308 ttgagctggagatgagtttga 74288
>emb|AL442203.12| Human DNA sequence from clone RP11-12I24 on chromosome 13 Contains the 5' end of a novel gene (contains KIAA0564 and FLJ21779) possible ortholog of RIKEN cDNA 1300010F03 gene, a lysyl-tRNA synthetase (KARS) pseudogene, a ribosomal protein S28 (RPS28) pseudogene and 2 CpG islands, complete sequence Length = 163511 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 tgctcaacataaccaatctcc 117 ||||||||||||||||||||| Sbjct: 35986 tgctcaacataaccaatctcc 36006
>gb|AC095045.2| Homo sapiens BAC clone RP11-140M23 from 4, complete sequence Length = 176923 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 644 ccccacgtggcaagcagggga 664 ||||||||||||||||||||| Sbjct: 172673 ccccacgtggcaagcagggga 172693
>gb|L42023.1| Haemophilus influenzae Rd KW20, complete genome Length = 1830138 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 56 aatttggaagaaatcgccaat 76 ||||||||||||||||||||| Sbjct: 1486453 aatttggaagaaatcgccaat 1486473
>emb|AL808028.5| Mouse DNA sequence from clone RP23-18H24 on chromosome X, complete sequence Length = 170380 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 282 ctttctcttttgacatctcct 302 ||||||||||||||||||||| Sbjct: 116762 ctttctcttttgacatctcct 116782
>ref|NM_184947.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2565 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 gaattgcttgtccaatgatc 350 |||||||||||||||||||| Sbjct: 1780 gaattgcttgtccaatgatc 1761
>gb|AC016781.6| Oryza sativa (japonica cultivar-group) clone OSJNBa0084C09, complete sequence Length = 151269 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 gaattgcttgtccaatgatc 350 |||||||||||||||||||| Sbjct: 139812 gaattgcttgtccaatgatc 139793
>gb|AC135190.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0064H09, complete sequence Length = 146742 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 ttccttcatcattatttctg 98 |||||||||||||||||||| Sbjct: 4619 ttccttcatcattatttctg 4638
>gb|AC136998.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0082P17, complete sequence Length = 157539 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 ttccttcatcattatttctg 98 |||||||||||||||||||| Sbjct: 112237 ttccttcatcattatttctg 112256
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 406 cgtcgagtttgccaaagagc 425 |||||||||||||||||||| Sbjct: 4854504 cgtcgagtttgccaaagagc 4854523
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 gaattgcttgtccaatgatc 350 |||||||||||||||||||| Sbjct: 20221726 gaattgcttgtccaatgatc 20221707 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 ttccttcatcattatttctg 98 |||||||||||||||||||| Sbjct: 7672669 ttccttcatcattatttctg 7672650
>gb|AC145804.2| Xenopus tropicalis clone CH216-83M4, complete sequence Length = 135836 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 agttgtttcagtcgctgctg 215 |||||||||||||||||||| Sbjct: 95229 agttgtttcagtcgctgctg 95210
>gb|AC126688.4| Mus musculus BAC clone RP23-152P20 from chromosome 7, complete sequence Length = 205673 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 327 ttgagaattgcttgtccaat 346 |||||||||||||||||||| Sbjct: 34322 ttgagaattgcttgtccaat 34303
>ref|XM_646058.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (180.t00010) partial mRNA Length = 1905 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 515 aacttcatatctccatccaaagga 538 |||||||||||| ||||||||||| Sbjct: 1694 aacttcatatcttcatccaaagga 1671
>ref|XM_647478.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (114.t00017) partial mRNA Length = 2691 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 515 aacttcatatctccatccaaagga 538 |||||||||||| ||||||||||| Sbjct: 2480 aacttcatatcttcatccaaagga 2457
>emb|AL512655.17| Human DNA sequence from clone RP11-536C2 on chromosome 13, complete sequence Length = 146002 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 tcttgatgctgctcactgtt 52 |||||||||||||||||||| Sbjct: 25947 tcttgatgctgctcactgtt 25966
>emb|AL445183.19| Human DNA sequence from clone RP11-334A14 on chromosome 1 Contains the 5' end of the SCP2 gene for sterol carrier protein 2, a pseudogene similar to part of related RAS viral (r-ras) oncogene homolog 2 (RRAS2), a beta polypeptide tubulin family pseudogene, the PODN gene for podocan, a likely ortholog of mouse hypoxia induced gene 1 (HIG1) pseudogene, two novel genes, the SLC1A7 gene for solute carrier family 1 (glutamate transporter) member 7 and a CpG island, complete sequence Length = 193774 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 308 agatcctctttggccaagct 327 |||||||||||||||||||| Sbjct: 67342 agatcctctttggccaagct 67323
>emb|AL390741.12| Human DNA sequence from clone RP11-38F19 on chromosome 6 Contains the DSCR1L1 gene for Down syndrome critical region gene 1-like 1 (MCIP2, ZAKI-4) and a novel gene, complete sequence Length = 128461 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 488 acaacatcaatggctgcctt 507 |||||||||||||||||||| Sbjct: 51795 acaacatcaatggctgcctt 51814
>ref|XM_967652.1| PREDICTED: Tribolium castaneum similar to 60S ribosomal protein L28 (LOC661497), mRNA Length = 479 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 313 ctctttggccaagcttgaga 332 |||||||||||||||||||| Sbjct: 308 ctctttggccaagcttgaga 327
>emb|BX908798.1| Parachlamydia-related symbiont UWE25, complete genome Length = 2414465 Score = 40.1 bits (20), Expect = 9.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 528 catccaaaggaatataggccatttcttt 555 |||| ||||||||||| ||||||||||| Sbjct: 352999 catctaaaggaatataagccatttcttt 352972
>emb|AL669849.19| Mouse DNA sequence from clone RP23-341O22 on chromosome 11 Contains part of the Dock2 gene for dedicator of cyto-kinesis 2, complete sequence Length = 148320 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 120 ctgcctatggcttctccaaacaag 143 ||||| |||||||||||||||||| Sbjct: 130299 ctgcccatggcttctccaaacaag 130322
>emb|AL731849.5| Mouse DNA sequence from clone RP23-208A2 on chromosome 11 Contains part of the Car10 gene for carbonic anhydrase 10, complete sequence Length = 114636 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 gtttctactttctcttttga 294 |||||||||||||||||||| Sbjct: 103472 gtttctactttctcttttga 103491
>gb|AC129008.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0096L14, from chromosome 3, complete sequence Length = 131142 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 ttccttcatcattatttctg 98 |||||||||||||||||||| Sbjct: 42621 ttccttcatcattatttctg 42640
>gb|AC022101.4| Homo sapiens chromosome 5 clone CTC-210G5, complete sequence Length = 173691 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 476 aatgggttgcagacaacatcaatg 499 |||||||||||||||||| ||||| Sbjct: 131468 aatgggttgcagacaacaacaatg 131491
>gb|AC022203.4|AC022203 Homo sapiens BAC clone RP11-490K15 from 13, complete sequence Length = 177088 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 tcttgatgctgctcactgtt 52 |||||||||||||||||||| Sbjct: 65915 tcttgatgctgctcactgtt 65896
>gb|AC084404.8|AC084404 Oryza sativa chromosome 3 BAC OSJNBa0026A15 genomic sequence, complete sequence Length = 156929 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 gaattgcttgtccaatgatc 350 |||||||||||||||||||| Sbjct: 17033 gaattgcttgtccaatgatc 17014
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 ttccttcatcattatttctg 98 |||||||||||||||||||| Sbjct: 26702161 ttccttcatcattatttctg 26702180
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 gaattgcttgtccaatgatc 350 |||||||||||||||||||| Sbjct: 20214755 gaattgcttgtccaatgatc 20214736 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 ttccttcatcattatttctg 98 |||||||||||||||||||| Sbjct: 7670504 ttccttcatcattatttctg 7670485
>gb|AY986476.1| Prochloron didemni subtilisin-like protein (patA), PatB (patB), PatC (patC), adenylation/heterocyclization protein (patD), patellamide precursor protein (patE), PatF (patF), thiazoline oxidase/subtilisin-like protease (patG), and deoxyribopyrimidine photolyase genes, complete cds Length = 12693 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 32 ctcttgatgctgctcactgttaca 55 ||||||||||||| |||||||||| Sbjct: 10764 ctcttgatgctgcccactgttaca 10741
>emb|AJ582021.1|EOF582021 Endosymbiont of Acanthamoeba sp. UWE25 ntt1 gene for nucleotide transport protein Length = 1542 Score = 40.1 bits (20), Expect = 9.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 528 catccaaaggaatataggccatttcttt 555 |||| ||||||||||| ||||||||||| Sbjct: 1279 catctaaaggaatataagccatttcttt 1252
>emb|AJ539070.1|NTA539070 Nicotiana tabacum cDNA-AFLP-fragment BT42-M1-031 Length = 219 Score = 40.1 bits (20), Expect = 9.4 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 482 ttgcagacaacatcaatggctgcctttccctt 513 ||||||||||||||||| |||| ||||||||| Sbjct: 187 ttgcagacaacatcaattgctg-ctttccctt 217
>emb|AJ538936.1|NTA538936 Nicotiana tabacum cDNA-AFLP-fragment BT21-M1-048 Length = 219 Score = 40.1 bits (20), Expect = 9.4 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 482 ttgcagacaacatcaatggctgcctttccctt 513 ||||||||||||||||| |||| ||||||||| Sbjct: 187 ttgcagacaacatcaattgctg-ctttccctt 217
>emb|BX004832.9| Zebrafish DNA sequence from clone CH211-89M19, complete sequence Length = 190952 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 tcagttccagttgtttcagt 207 |||||||||||||||||||| Sbjct: 29745 tcagttccagttgtttcagt 29726
>emb|AL928999.4| Zebrafish DNA sequence from clone CH211-227C6, complete sequence Length = 169570 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 tcagttccagttgtttcagt 207 |||||||||||||||||||| Sbjct: 135384 tcagttccagttgtttcagt 135403
>dbj|AK122133.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033133F23, full insert sequence Length = 2685 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 gaattgcttgtccaatgatc 350 |||||||||||||||||||| Sbjct: 1881 gaattgcttgtccaatgatc 1862
>dbj|AK102744.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033106I07, full insert sequence Length = 2510 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 gaattgcttgtccaatgatc 350 |||||||||||||||||||| Sbjct: 1871 gaattgcttgtccaatgatc 1852
>emb|AL935201.10| Zebrafish DNA sequence from clone CH211-251C24 in linkage group 24, complete sequence Length = 143327 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 gttatcagttccagttgttt 203 |||||||||||||||||||| Sbjct: 108196 gttatcagttccagttgttt 108215
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 ttccttcatcattatttctg 98 |||||||||||||||||||| Sbjct: 27027224 ttccttcatcattatttctg 27027243
>dbj|AB040052.1| Oryza sativa (japonica cultivar-group) mEF-G gene for mitochondrial elongation factor G, complete cds Length = 16307 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 gaattgcttgtccaatgatc 350 |||||||||||||||||||| Sbjct: 13056 gaattgcttgtccaatgatc 13037
>dbj|AB040051.1| Oryza sativa (japonica cultivar-group) mEF-G mRNA for mitochondrial elongation factor G, complete cds Length = 2583 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 gaattgcttgtccaatgatc 350 |||||||||||||||||||| Sbjct: 1886 gaattgcttgtccaatgatc 1867 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,569,075 Number of Sequences: 3902068 Number of extensions: 6569075 Number of successful extensions: 127398 Number of sequences better than 10.0: 78 Number of HSP's better than 10.0 without gapping: 78 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 126901 Number of HSP's gapped (non-prelim): 495 length of query: 686 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 663 effective length of database: 17,143,297,704 effective search space: 11366006377752 effective search space used: 11366006377752 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)