>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,|
           chloroplast precursor (RuBisCO activase A) (RA A)
          Length = 464

 Score =  284 bits (727), Expect(2) = 1e-95
 Identities = 139/139 (100%), Positives = 139/139 (100%)
 Frame = -3

Query: 704 RMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVR 525
           RMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVR
Sbjct: 289 RMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVR 348

Query: 524 KWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMS 345
           KWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMS
Sbjct: 349 KWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMS 408

Query: 344 QAALGDANQDAMKTGSFYG 288
           QAALGDANQDAMKTGSFYG
Sbjct: 409 QAALGDANQDAMKTGSFYG 427



 Score = 86.3 bits (212), Expect(2) = 1e-95
 Identities = 38/38 (100%), Positives = 38/38 (100%)
 Frame = -2

Query: 240 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 127
           GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF
Sbjct: 427 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 464

>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
           (RubisCO activase alpha form)
          Length = 476

 Score =  236 bits (602), Expect(2) = 2e-75
 Identities = 109/139 (78%), Positives = 127/139 (91%)
 Frame = -3

Query: 704 RMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVR 525
           RMEKFYWAPTR+DRIGVCKGIF+TDNV+D+ +VK+VDTFPGQSIDFFGALRARVY DEVR
Sbjct: 299 RMEKFYWAPTREDRIGVCKGIFRTDNVADDDIVKLVDTFPGQSIDFFGALRARVYHDEVR 358

Query: 524 KWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMS 345
           KWV   G++ IGK+LVNS++GP +FEQPKMT++KLL YG MLVQEQ+NVKRVQLAD YMS
Sbjct: 359 KWVSEVGVDTIGKKLVNSKEGPPSFEQPKMTIDKLLGYGGMLVQEQENVKRVQLADKYMS 418

Query: 344 QAALGDANQDAMKTGSFYG 288
           +AALGDAN DA+K G+FYG
Sbjct: 419 EAALGDANNDAIKRGTFYG 437



 Score = 66.6 bits (161), Expect(2) = 2e-75
 Identities = 30/40 (75%), Positives = 33/40 (82%), Gaps = 1/40 (2%)
 Frame = -2

Query: 243 GGKGAQQ-GTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 127
           GG+ AQQ G +PVPEGCTD  A NYDPTARSDDGSC+Y F
Sbjct: 437 GGQAAQQVGNVPVPEGCTDPQATNYDPTARSDDGSCVYKF 476

>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 474

 Score =  229 bits (583), Expect(2) = 1e-73
 Identities = 108/139 (77%), Positives = 124/139 (89%)
 Frame = -3

Query: 704 RMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVR 525
           RMEKFYWAPTR+DRIGVCKGIF+TD + DE +V +VD FPGQSIDFFGALRARVYDDEVR
Sbjct: 299 RMEKFYWAPTREDRIGVCKGIFRTDKIKDEDIVTLVDQFPGQSIDFFGALRARVYDDEVR 358

Query: 524 KWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMS 345
           K+V S G+E IGKRLVNSR+GP  FEQP+MT EKL+EYG+MLV EQ+NVKRVQLA+TY+S
Sbjct: 359 KFVESLGVEKIGKRLVNSREGPPVFEQPEMTYEKLMEYGNMLVMEQENVKRVQLAETYLS 418

Query: 344 QAALGDANQDAMKTGSFYG 288
           QAALGDAN DA+  G+FYG
Sbjct: 419 QAALGDANADAIGRGTFYG 437



 Score = 67.8 bits (164), Expect(2) = 1e-73
 Identities = 29/38 (76%), Positives = 33/38 (86%)
 Frame = -2

Query: 240 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 127
           GKGAQQ  LPVPEGCTD  A+N+DPTARSDDG+C+Y F
Sbjct: 437 GKGAQQVNLPVPEGCTDPVAENFDPTARSDDGTCVYNF 474

>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 472

 Score =  228 bits (581), Expect(2) = 4e-72
 Identities = 106/139 (76%), Positives = 124/139 (89%)
 Frame = -3

Query: 704 RMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVR 525
           RMEKFYWAPTR+DRIGVC GIF+TD V  E VVK+VD FPGQSIDFFGALRARVY DEVR
Sbjct: 297 RMEKFYWAPTREDRIGVCTGIFKTDKVPAEHVVKLVDAFPGQSIDFFGALRARVYHDEVR 356

Query: 524 KWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMS 345
           KWV S G++N+GK+LVNS+DGP  FEQP+MT++KL+EYG+MLVQEQ+NVKRVQLAD YMS
Sbjct: 357 KWVNSVGVDNVGKKLVNSKDGPPVFEQPEMTLQKLMEYGNMLVQEQENVKRVQLADQYMS 416

Query: 344 QAALGDANQDAMKTGSFYG 288
            AALGDAN+DA+  G+F+G
Sbjct: 417 SAALGDANKDAIDRGTFFG 435



 Score = 63.9 bits (154), Expect(2) = 4e-72
 Identities = 28/36 (77%), Positives = 30/36 (83%)
 Frame = -2

Query: 240 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLY 133
           GK AQQ +LPV +GCTD  AKNYDPTARSDDGSC Y
Sbjct: 435 GKAAQQVSLPVAQGCTDPEAKNYDPTARSDDGSCTY 470

>RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 432

 Score =  252 bits (643), Expect = 9e-67
 Identities = 117/139 (84%), Positives = 131/139 (94%)
 Frame = -3

Query: 704 RMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVR 525
           RMEKFYWAPTRDDR+GVCKGIF+TDNV DE +VKIVD+FPGQSIDFFGALRARVYDDEVR
Sbjct: 289 RMEKFYWAPTRDDRVGVCKGIFRTDNVPDEDIVKIVDSFPGQSIDFFGALRARVYDDEVR 348

Query: 524 KWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMS 345
           KWV  TG+ENIGKRLVNSR+GP  FEQPKMT+EKL+EYG+MLV+EQ+NVKRVQLA+ Y+S
Sbjct: 349 KWVSDTGVENIGKRLVNSREGPPEFEQPKMTIEKLIEYGYMLVKEQENVKRVQLAEQYLS 408

Query: 344 QAALGDANQDAMKTGSFYG 288
           +AALGDAN DAMKTGSFYG
Sbjct: 409 EAALGDANSDAMKTGSFYG 427

>RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B,|
           chloroplast precursor (RuBisCO activase B) (RA B)
          Length = 425

 Score =  252 bits (643), Expect = 9e-67
 Identities = 117/139 (84%), Positives = 131/139 (94%)
 Frame = -3

Query: 704 RMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVR 525
           RMEKFYWAPTR+DRIGVCKGIF+TDNV DE+VV++VDTFPGQSIDFFGALRARVYDDEVR
Sbjct: 286 RMEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVR 345

Query: 524 KWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMS 345
           KWVG  G+ENI KRLVNSR+GP TF+QPKMT+EKL+EYGHMLVQEQ+NVKRVQLAD Y+S
Sbjct: 346 KWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLS 405

Query: 344 QAALGDANQDAMKTGSFYG 288
           +AALG AN DAMKTG+FYG
Sbjct: 406 EAALGQANDDAMKTGAFYG 424

>RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 437

 Score =  239 bits (610), Expect = 6e-63
 Identities = 110/139 (79%), Positives = 129/139 (92%)
 Frame = -3

Query: 704 RMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVR 525
           RMEKFYWAPTR+DRIGVC GIF++DNV+ E +VK+VDTFPGQSIDFFGALRARVYDDEVR
Sbjct: 299 RMEKFYWAPTREDRIGVCIGIFRSDNVAKEDIVKLVDTFPGQSIDFFGALRARVYDDEVR 358

Query: 524 KWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMS 345
           KW+   G+++IGK+LVNS++GP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLAD Y+S
Sbjct: 359 KWITGVGVDSIGKKLVNSKEGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLS 418

Query: 344 QAALGDANQDAMKTGSFYG 288
           +AALGDAN DAM TG+FYG
Sbjct: 419 EAALGDANSDAMNTGTFYG 437

>RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 433

 Score =  238 bits (608), Expect = 1e-62
 Identities = 109/138 (78%), Positives = 129/138 (93%)
 Frame = -3

Query: 704 RMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVR 525
           RMEKFYWAPTR+DRIGVCKGIF+TD V +E VV++VDTFPGQSIDFFGALRARVYDDEVR
Sbjct: 295 RMEKFYWAPTREDRIGVCKGIFRTDGVDEEHVVQLVDTFPGQSIDFFGALRARVYDDEVR 354

Query: 524 KWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMS 345
           +WV  TG+ENI ++LVNS++GP TFEQPK+T+EKLLEYGHMLV EQ+NVKRVQLAD Y++
Sbjct: 355 RWVSETGVENIARKLVNSKEGPPTFEQPKITIEKLLEYGHMLVAEQENVKRVQLADKYLN 414

Query: 344 QAALGDANQDAMKTGSFY 291
           +AALG+AN+DAMKTGSF+
Sbjct: 415 EAALGEANEDAMKTGSFF 432

>RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
          Length = 439

 Score =  238 bits (606), Expect = 2e-62
 Identities = 113/137 (82%), Positives = 127/137 (92%)
 Frame = -3

Query: 704 RMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVR 525
           RMEKFYWAPTR+DRIGVCKGIF+TDNV +E+V+KIVDTFPGQSIDFFGALRARVYDDEVR
Sbjct: 303 RMEKFYWAPTREDRIGVCKGIFRTDNVPEEAVIKIVDTFPGQSIDFFGALRARVYDDEVR 362

Query: 524 KWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMS 345
           KWV  TGIE IG +L+NS DGP TFEQPKMTVEKLLEYG+MLVQEQ+NVKRVQLA+TY+ 
Sbjct: 363 KWVSGTGIEAIGDKLLNSFDGPPTFEQPKMTVEKLLEYGNMLVQEQENVKRVQLAETYLK 422

Query: 344 QAALGDANQDAMKTGSF 294
           +AALGDAN DA+ TG+F
Sbjct: 423 EAALGDANADAINTGNF 439

>RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 459

 Score =  236 bits (602), Expect = 5e-62
 Identities = 112/135 (82%), Positives = 127/135 (94%)
 Frame = -3

Query: 704 RMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVR 525
           RMEKFYWAPTR+DRIGVCKGIF+TDNV +E+VVKIVD+FPGQSIDFFGALRARVYDDEVR
Sbjct: 298 RMEKFYWAPTREDRIGVCKGIFRTDNVPEEAVVKIVDSFPGQSIDFFGALRARVYDDEVR 357

Query: 524 KWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMS 345
           KWV  TGIE IG++L+NSRDGP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLA+TY+ 
Sbjct: 358 KWVSGTGIELIGEKLLNSRDGPPTFEQPKMTLEKLLEYGNMLVQEQENVKRVQLAETYLK 417

Query: 344 QAALGDANQDAMKTG 300
           +AALGDAN DA+ TG
Sbjct: 418 EAALGDANADAINTG 432

>RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
           (RubisCO activase beta form)
          Length = 435

 Score =  236 bits (601), Expect = 7e-62
 Identities = 108/137 (78%), Positives = 127/137 (92%)
 Frame = -3

Query: 704 RMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVR 525
           RMEKFYWAPTR+DRIGVCKGIF+TDNV +E +VK+VD FPGQSIDFFGALRARVYDDEVR
Sbjct: 299 RMEKFYWAPTREDRIGVCKGIFRTDNVPEEDIVKVVDQFPGQSIDFFGALRARVYDDEVR 358

Query: 524 KWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMS 345
           KWV   G++ IGK+LVNS++GP TFEQPKMT++KLL+YG+MLV+EQ+NVKRVQLAD YMS
Sbjct: 359 KWVSEVGVDTIGKKLVNSKEGPPTFEQPKMTIDKLLQYGNMLVEEQENVKRVQLADKYMS 418

Query: 344 QAALGDANQDAMKTGSF 294
           +AALGDANQDA+K G+F
Sbjct: 419 EAALGDANQDAIKRGTF 435

>RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
          Length = 442

 Score =  232 bits (591), Expect = 1e-60
 Identities = 111/138 (80%), Positives = 122/138 (88%)
 Frame = -3

Query: 704 RMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVR 525
           RMEKFYWAPTR+DRIGVC GIF+TDNV  E VVKIVD FPGQSIDFFGALRARVYDDEVR
Sbjct: 303 RMEKFYWAPTREDRIGVCTGIFRTDNVPAEDVVKIVDNFPGQSIDFFGALRARVYDDEVR 362

Query: 524 KWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMS 345
           KWV  TGIE IG +L+NS DGP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLAD Y+ 
Sbjct: 363 KWVSGTGIEKIGDKLLNSFDGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLK 422

Query: 344 QAALGDANQDAMKTGSFY 291
           +AALGDAN DA+  GSF+
Sbjct: 423 EAALGDANADAINNGSFF 440

>RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 439

 Score =  227 bits (579), Expect = 2e-59
 Identities = 101/138 (73%), Positives = 127/138 (92%)
 Frame = -3

Query: 704 RMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVR 525
           RMEKFYWAPTRDDR+GVCKGIF+TD V +E + K+VDTFPGQSIDFFGALRARVYDDEVR
Sbjct: 301 RMEKFYWAPTRDDRVGVCKGIFRTDGVPEEDITKLVDTFPGQSIDFFGALRARVYDDEVR 360

Query: 524 KWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMS 345
           KW+   G++  GK+LVNS++GP TF+QPKM+++KLL+YG+MLVQEQ+NVKRVQLAD Y++
Sbjct: 361 KWISGVGVDATGKKLVNSKEGPPTFDQPKMSLDKLLQYGNMLVQEQENVKRVQLADKYLN 420

Query: 344 QAALGDANQDAMKTGSFY 291
           +AALG+AN+DA+K+GSF+
Sbjct: 421 EAALGNANEDAIKSGSFF 438

>RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 441

 Score =  219 bits (557), Expect = 8e-57
 Identities = 98/138 (71%), Positives = 125/138 (90%)
 Frame = -3

Query: 704 RMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVR 525
           RMEKFYWAPTR+DRIGVCKGIF+TD V ++ +V++VD  PGQSIDFFGALRARVYDDEVR
Sbjct: 303 RMEKFYWAPTREDRIGVCKGIFRTDGVPEKDIVELVDKHPGQSIDFFGALRARVYDDEVR 362

Query: 524 KWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMS 345
           KW+   G++++GK+LVNS++GP TF+QPKMT++KLL Y  MLVQEQ+NVKRVQLAD Y++
Sbjct: 363 KWISGVGVDSVGKKLVNSKEGPPTFDQPKMTLDKLLLYASMLVQEQENVKRVQLADQYLN 422

Query: 344 QAALGDANQDAMKTGSFY 291
           +AALG+AN+DA+K+GSF+
Sbjct: 423 EAALGNANEDAIKSGSFF 440

>RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 413

 Score =  186 bits (473), Expect = 5e-47
 Identities = 85/114 (74%), Positives = 100/114 (87%)
 Frame = -3

Query: 704 RMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVR 525
           RM+KFYWAPTR+DRIG+C GIF+TD V  E +VK+VDTFPGQSIDFFGALRARVYDDEVR
Sbjct: 296 RMDKFYWAPTREDRIGICTGIFRTDGVPFEDIVKLVDTFPGQSIDFFGALRARVYDDEVR 355

Query: 524 KWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQL 363
           KW    G+E IG+ LVNS++ P TF+QPKMT+EKLLEYG+MLV EQ+NVKRV+L
Sbjct: 356 KWAVGVGVERIGRNLVNSKESPPTFDQPKMTIEKLLEYGNMLVMEQENVKRVKL 409

>RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 408

 Score =  160 bits (404), Expect = 5e-39
 Identities = 78/124 (62%), Positives = 94/124 (75%)
 Frame = -3

Query: 704 RMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVR 525
           RMEK+YW PTR+DRIGVC GIFQ DNV    V  +VDTFPGQSIDFFGALRARVYDD VR
Sbjct: 272 RMEKYYWNPTREDRIGVCMGIFQEDNVQRREVENLVDTFPGQSIDFFGALRARVYDDMVR 331

Query: 524 KWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMS 345
           +W+  TG++ IG++LVN+R   V   +  M +  L++YG  LV EQ+NVKRVQLAD Y+S
Sbjct: 332 QWITDTGVDKIGQQLVNARQ-KVAMPKVSMDLNVLIKYGKSLVDEQENVKRVQLADAYLS 390

Query: 344 QAAL 333
            A L
Sbjct: 391 GAEL 394

>RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase activase|
           (RuBisCO activase) (RA)
          Length = 415

 Score =  128 bits (322), Expect = 1e-29
 Identities = 56/118 (47%), Positives = 81/118 (68%)
 Frame = -3

Query: 704 RMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVR 525
           RMEKFYW P RD+++G+  GIF  D +S   V K+VD+FP QSIDFF ALR+R+YD+++R
Sbjct: 172 RMEKFYWEPHRDEKVGIVGGIFAEDGLSQRDVEKLVDSFPNQSIDFFSALRSRIYDEQIR 231

Query: 524 KWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTY 351
            ++   G EN+  R+VNS +GP  F++P  T+  L+E  + +V EQ  ++  QL D Y
Sbjct: 232 DFIHQVGYENVSLRVVNSLEGPPAFKKPDFTLSHLIESANFMVAEQKRIETSQLVDEY 289

>RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase activase|
           (RuBisCO activase) (RA)
          Length = 414

 Score =  123 bits (308), Expect = 6e-28
 Identities = 55/118 (46%), Positives = 79/118 (66%)
 Frame = -3

Query: 704 RMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVR 525
           RMEKFYW P RDD++G+  GIF  D +S   + ++VDTFP QSIDFF ALR+R+YD ++R
Sbjct: 172 RMEKFYWEPNRDDKVGIVGGIFAEDGLSQREIEQLVDTFPKQSIDFFSALRSRIYDIQIR 231

Query: 524 KWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTY 351
            ++   G E I  R+VNS + P  F++P  ++  L+E G++++ EQ  V   QL D Y
Sbjct: 232 DFIHKVGFERISLRVVNSLEAPPEFKKPDFSLAHLIESGNLVLGEQQRVDNSQLVDEY 289

>RCA_POPEU (P84562) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast (RuBisCO activase) (RA) (Fragments)
          Length = 32

 Score = 47.0 bits (110), Expect = 6e-05
 Identities = 27/60 (45%), Positives = 30/60 (50%)
 Frame = -3

Query: 602 IVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEK 423
           +VDTFPGQSIDFFGAL                            R+GP TFEQP MT+EK
Sbjct: 1   LVDTFPGQSIDFFGAL----------------------------REGPPTFEQPAMTIEK 32

>EF1A2_XENLA (P17507) Elongation factor 1-alpha, oocyte form (EF-1-alpha-O)|
           (EF-1AO) (42S p48)
          Length = 461

 Score = 31.6 bits (70), Expect = 2.5
 Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 8/78 (10%)
 Frame = -3

Query: 458 VTFEQPKMTVE-KLLEYGHMLVQEQ-------DNVKRVQLADTYMSQAALGDANQDAMKT 303
           VTF    +T E K +E  H  +QE         NVK + + D      A    N   M+ 
Sbjct: 278 VTFAPSNVTTEVKSVEMHHEALQEALPGDNVGFNVKNISVKDIRRGNVAGDSKNDPPMQA 337

Query: 302 GSFYG*KILHTHPPSLAA 249
           GSF    I+  HP  ++A
Sbjct: 338 GSFTAQVIILNHPGQISA 355

>YNEI_ECOLI (P76149) Aldehyde dehydrogenase-like protein yneI (EC 1.2.1.-)|
          Length = 462

 Score = 30.4 bits (67), Expect = 5.5
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = +3

Query: 519 PLAHLIVVHPSTQSTEKVNGLSWEGVDDLDDRLVTDIVGLED 644
           P  H I ++P+T   E+++ L W G DD+++ L     G  D
Sbjct: 5   PATHAISINPATG--EQLSVLPWAGADDIENALQLAAAGFRD 44

>LEPA_HELPY (O25122) GTP-binding protein lepA|
          Length = 602

 Score = 30.4 bits (67), Expect = 5.5
 Identities = 20/79 (25%), Positives = 37/79 (46%)
 Frame = -3

Query: 605 KIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVE 426
           KI+ T P  S DF   L+A +YD     ++G+         LV   DG +  EQ  + + 
Sbjct: 180 KIITTIPAPSGDFNAPLKALIYDSWFDNYLGALA-------LVRIMDGSINTEQEILVMG 232

Query: 425 KLLEYGHMLVQEQDNVKRV 369
              ++G + +   + +K++
Sbjct: 233 TGKKHGVLGLYYPNPLKKI 251

>EF1A_ONCVO (P27592) Elongation factor 1-alpha (EF-1-alpha)|
          Length = 464

 Score = 30.0 bits (66), Expect = 7.2
 Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 8/78 (10%)
 Frame = -3

Query: 458 VTFEQPKMTVE-KLLEYGHMLVQEQ-------DNVKRVQLADTYMSQAALGDANQDAMKT 303
           VTF    +T E K +E  H  +QE         NVK + + D      A    N  A +T
Sbjct: 278 VTFAPQNLTTEVKSVEMHHEALQEALPGDNVGFNVKNISIKDIRRGSVASDSKNDPAKET 337

Query: 302 GSFYG*KILHTHPPSLAA 249
             F    I+  HP  ++A
Sbjct: 338 KMFTAQVIIMNHPGQISA 355

>GP116_HUMAN (Q8IZF2) Probable G-protein coupled receptor 116 precursor|
          Length = 1346

 Score = 30.0 bits (66), Expect = 7.2
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +1

Query: 355 VSASCTRLTLSCSWTSMCPYSSSFSTVIFGCSKVT 459
           + +SC+R TL    T  CP  SS +TVI+ C  ++
Sbjct: 420 IDSSCSRYTLKADGTQ-CPSGSSGTTVIYTCEFIS 453

>LRC24_MOUSE (Q8BHA1) Leucine-rich repeat-containing protein 24 precursor|
          Length = 521

 Score = 29.6 bits (65), Expect = 9.4
 Identities = 16/37 (43%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
 Frame = -3

Query: 521 WVGSTGIENIGKRLVNSRDGPVT-FEQPKMTVEKLLE 414
           W+GS  I+  G+RL++SRD  +T  E P++ ++ LLE
Sbjct: 222 WLGSW-IKEGGRRLLSSRDKKITCAEPPRLALQSLLE 257

>SYL_PSESM (Q87VX3) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)|
            (LeuRS)
          Length = 868

 Score = 29.6 bits (65), Expect = 9.4
 Identities = 34/137 (24%), Positives = 55/137 (40%), Gaps = 4/137 (2%)
 Frame = +3

Query: 291  VEGTSLHRILVSITQSCLAHVGVSKLHTLDIVLLLDEHVPVXXXXXXXXXXXXEGHGPVP 470
            VEG+  HR L  + +   AHVG     +LDI  L DE   V            +  G   
Sbjct: 671  VEGS--HRFLRRVWRLAQAHVGQGASGSLDIAALTDEQKAVRRSIHQAIKQASQDIGQNQ 728

Query: 471  RVHQPLANVLDSGRADPLAHLIVVHPSTQSTEKVNGLSWEGVDDLDDRL--VTDIVGLE- 641
            + +  +A V        +  + V+  + Q+T +   L  EG++ +   L  +T  +  E 
Sbjct: 729  KFNTAVAQV--------MTLMNVLEKAPQATPQDRALLQEGLETVTLLLAPITPHISHEL 780

Query: 642  -DTLADTDTVVTGGSPV 689
               L   + V+  G PV
Sbjct: 781  WTQLGHNEPVIDAGWPV 797


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 99,897,452
Number of Sequences: 219361
Number of extensions: 2031309
Number of successful extensions: 6126
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 5933
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6123
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7082949625
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)