>gb|AC165950.1| Mus musculus BAC clone RP24-235L20 from chromosome 13, complete sequence
          Length = 178927

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 166    aaagcaagttcccaaacattct 187
              ||||||||||||||||||||||
Sbjct: 165380 aaagcaagttcccaaacattct 165359

>gb|AC154216.1| Mus musculus BAC clone RP24-354I21 from 13, complete sequence
          Length = 209934

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 166   aaagcaagttcccaaacattct 187
             ||||||||||||||||||||||
Sbjct: 31639 aaagcaagttcccaaacattct 31618

>gb|AC185988.2| Pan troglodytes BAC clone CH251-398L15 from chromosome 6, complete
            sequence
          Length = 148530

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 110  ttttctgtaaactcctgtttc 130
            |||||||||||||||||||||
Sbjct: 7682 ttttctgtaaactcctgtttc 7662

>gb|AC007036.3| Homo sapiens BAC clone RP11-112E16 from 7, complete sequence
          Length = 167700

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 426   actgtgtactgcattgtttctggca 450
             |||||||||||||||||| ||||||
Sbjct: 45898 actgtgtactgcattgttcctggca 45922

>emb|AL450319.4| Human DNA sequence from clone RP11-13B22 on chromosome 6 Contains the
             5' end of a novel gene and a CpG island, complete sequence
          Length = 124883

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 110   ttttctgtaaactcctgtttc 130
             |||||||||||||||||||||
Sbjct: 43458 ttttctgtaaactcctgtttc 43478

>gb|AC092554.3| Papio anubis clone RP41-414G17, complete sequence
          Length = 167543

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 426    actgtgtactgcattgtttctggca 450
              |||||||||||||||||| ||||||
Sbjct: 151377 actgtgtactgcattgttcctggca 151401

>emb|AL034397.1|HS159A1 Human DNA sequence from clone RP6-159A1 on chromosome Xq12-13.3
             Contains the gene for Ig superfamily protein (Z39IG), a
             novel gene, a heterogenous nuclear ribonucleoprotein G
             pseudogene and a CpG island, complete sequence
          Length = 115218

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 249   atggtttcctctttgagattc 269
             |||||||||||||||||||||
Sbjct: 34150 atggtttcctctttgagattc 34170

>emb|BX530017.13| Zebrafish DNA sequence from clone CH211-242H13 in linkage group 6,
              complete sequence
          Length = 164713

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 62     ctaaacaaaataacttgtgat 82
              |||||||||||||||||||||
Sbjct: 162553 ctaaacaaaataacttgtgat 162533

>gb|AC102462.19| Mus musculus chromosome 1, clone RP24-327F2, complete sequence
          Length = 141794

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 382   aagataaaagaaagccatgga 402
             |||||||||||||||||||||
Sbjct: 40349 aagataaaagaaagccatgga 40329

>gb|AC096338.17| Rattus norvegicus X BAC CH230-95I19 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 236662

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 319    ccatgcttagcaccataact 338
              ||||||||||||||||||||
Sbjct: 119837 ccatgcttagcaccataact 119856

>ref|NM_006203.3| Homo sapiens phosphodiesterase 4D, cAMP-specific (phosphodiesterase
            E3 dunce homolog, Drosophila) (PDE4D), mRNA
          Length = 5876

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 170  caagttcccaaacattcttgtgaa 193
            |||||||||||| |||||||||||
Sbjct: 4507 caagttcccaaatattcttgtgaa 4484

>emb|Z95327.1|HS347M6 Human DNA sequence from clone RP3-347M6 on chromosome Xq22 Contains a
             peptidylprolyl isomerase A (cyclophilin A) (PPIA)
             pseudogene, a RAD21 homolog (S. pombe) (LOC139319)
             pseudogene and the 5' end of the CSTF2 gene for cleavage
             stimulation factor (3' pre-RNA, subunit 2, 64kDa),
             complete sequence
          Length = 56583

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 179   aaacattcttgtgaatgact 198
             ||||||||||||||||||||
Sbjct: 44627 aaacattcttgtgaatgact 44608

>gb|AF158101.6| Enterobacteria phage T4, complete genome
          Length = 168903

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 52    tctaatgcaactaaacaaaa 71
             ||||||||||||||||||||
Sbjct: 38103 tctaatgcaactaaacaaaa 38084

>gb|AF536980.1| Homo sapiens cAMP-specific phosphodiesterase (PDE4D) mRNA, 3'
            untranslated region, partial sequence
          Length = 4654

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 170  caagttcccaaacattcttgtgaa 193
            |||||||||||| |||||||||||
Sbjct: 2411 caagttcccaaatattcttgtgaa 2388

>emb|X01804.1|MYT45546 Bacteriophage T4 genes 55, alpha-gt, 47 and 46
          Length = 7084

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 52   tctaatgcaactaaacaaaa 71
            ||||||||||||||||||||
Sbjct: 2079 tctaatgcaactaaacaaaa 2098

>emb|BX950179.6| Zebrafish DNA sequence from clone DKEY-27P23 in linkage group 5,
             complete sequence
          Length = 235445

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 306   cttacacacacatccatgct 325
             ||||||||||||||||||||
Sbjct: 23001 cttacacacacatccatgct 23020

>ref|NM_205067.1| Gallus gallus heat shock 10kDa protein 1 (chaperonin 10) (HSPE1),
           mRNA
          Length = 632

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 67  caaaataacttgtgatctca 86
           ||||||||||||||||||||
Sbjct: 574 caaaataacttgtgatctca 593

>emb|BX571714.7| Zebrafish DNA sequence from clone DKEY-16L2 in linkage group 3,
             complete sequence
          Length = 240105

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 380   gtaagataaaagaaagccat 399
             ||||||||||||||||||||
Sbjct: 31390 gtaagataaaagaaagccat 31409

>gb|AC012154.16| Homo sapiens 3 BAC RP11-48H24 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 193829

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 86    agataatgagcattgcaatc 105
             ||||||||||||||||||||
Sbjct: 13582 agataatgagcattgcaatc 13601

>gb|AC113139.2| Homo sapiens chromosome 8, clone CTD-3214K23, complete sequence
          Length = 185102

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 489   ttactttaaactcaccaagt 508
             ||||||||||||||||||||
Sbjct: 44666 ttactttaaactcaccaagt 44647

>gb|M10160.1|PT4G55G43 Bacteriophage T4 genes 55, alpha-gt, 47, 46, 45, 44, 62, regA, and 43
          Length = 13065

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 52   tctaatgcaactaaacaaaa 71
            ||||||||||||||||||||
Sbjct: 2079 tctaatgcaactaaacaaaa 2098

>gb|AC092343.3| Homo sapiens chromosome 5 clone RP11-266N13, complete sequence
          Length = 180278

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 170    caagttcccaaacattcttgtgaa 193
              |||||||||||| |||||||||||
Sbjct: 129081 caagttcccaaatattcttgtgaa 129058

>gb|AC026703.4| Homo sapiens chromosome 5 clone CTD-2029A10, complete sequence
          Length = 132155

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 469    gcaaatgtgcctgacagcca 488
              ||||||||||||||||||||
Sbjct: 118597 gcaaatgtgcctgacagcca 118616

>gb|AC009309.4| Homo sapiens BAC clone RP11-301O19 from 2, complete sequence
          Length = 170720

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 238   aaaatagaggcatggtttcc 257
             ||||||||||||||||||||
Sbjct: 60681 aaaatagaggcatggtttcc 60700

>gb|AC074131.3| Homo sapiens chromosome 5 clone CTD-2232E5, complete sequence
          Length = 126181

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 56    atgcaactaaacaaaataac 75
             ||||||||||||||||||||
Sbjct: 21991 atgcaactaaacaaaataac 21972

>gb|AC008931.8| Homo sapiens chromosome 5 clone CTD-2294L1, complete sequence
          Length = 140394

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 56     atgcaactaaacaaaataac 75
              ||||||||||||||||||||
Sbjct: 137776 atgcaactaaacaaaataac 137757

>gb|AC008766.4|AC008766 Homo sapiens chromosome 5 clone CTD-2004A9, complete sequence
          Length = 147530

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 469    gcaaatgtgcctgacagcca 488
              ||||||||||||||||||||
Sbjct: 135044 gcaaatgtgcctgacagcca 135025

>emb|BX119985.7| Zebrafish DNA sequence from clone CH211-270B10 in linkage group 11,
             complete sequence
          Length = 172959

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 306   cttacacacacatccatgct 325
             ||||||||||||||||||||
Sbjct: 23413 cttacacacacatccatgct 23432

>emb|BX276095.7| Zebrafish DNA sequence from clone CH211-225H17, complete sequence
          Length = 197554

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 4     accgaatagatgacgataaa 23
             ||||||||||||||||||||
Sbjct: 28638 accgaatagatgacgataaa 28657

>emb|BX510933.4| Zebrafish DNA sequence from clone CH211-271G16 in linkage group 4,
             complete sequence
          Length = 151440

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 306   cttacacacacatccatgct 325
             ||||||||||||||||||||
Sbjct: 12636 cttacacacacatccatgct 12655

>emb|CT967325.1| Zebrafish DNA sequence from clone DKEY-25K11, complete sequence
          Length = 267826

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 437    cattgtttctggcaatgcct 456
              ||||||||||||||||||||
Sbjct: 246936 cattgtttctggcaatgcct 246917

>gb|AF466201.1| Sorghum bicolor clone SBTXS_0032H17 putative cytochrome P450-like
             protein, putative DNA-binding protein homolog,
             TATA-binding protein, hypothetical protein M3E9.200,
             3-glucanase, K-exchanger-like protein, small heat
             shock-like protein, methionine synthase protein, putative
             far-red impaired response protein, and putative vegetative
             storage protein genes, complete cds
          Length = 100773

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 48    aacatctaatgcaactaaacaaaa 71
             ||||||||||||||| ||||||||
Sbjct: 49959 aacatctaatgcaacaaaacaaaa 49936

>emb|BX470164.10| Zebrafish DNA sequence from clone DKEY-24L11 in linkage group 18,
              complete sequence
          Length = 248419

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 437    cattgtttctggcaatgcct 456
              ||||||||||||||||||||
Sbjct: 233817 cattgtttctggcaatgcct 233836

>emb|AL137129.4|CNS01DWE Human chromosome 14 DNA sequence BAC R-618G20 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 188107

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 116    gtaaactcctgtttctgcct 135
              ||||||||||||||||||||
Sbjct: 100388 gtaaactcctgtttctgcct 100407

>gb|AC151343.2| Xenopus tropicalis clone ISB-373E17, complete sequence
          Length = 88775

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 493   tttaaactcaccaagtcacc 512
             ||||||||||||||||||||
Sbjct: 67266 tttaaactcaccaagtcacc 67247

>emb|BX005142.4| Zebrafish DNA sequence from clone CH211-129K16 in linkage group 3,
              complete sequence
          Length = 170200

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 380    gtaagataaaagaaagccat 399
              ||||||||||||||||||||
Sbjct: 116158 gtaagataaaagaaagccat 116177

>gb|U02882.1|HSU02882 Human rolipram-sensitive 3',5'-cyclic AMP phosphodiesterase mRNA,
            complete cds
          Length = 5706

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 170  caagttcccaaacattcttgtgaa 193
            |||||||||||| |||||||||||
Sbjct: 4334 caagttcccaaatattcttgtgaa 4311

>gb|AF031309.1|AF031309 Gallus gallus heat shock protein 10 mRNA, complete cds
          Length = 632

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 67  caaaataacttgtgatctca 86
           ||||||||||||||||||||
Sbjct: 574 caaaataacttgtgatctca 593


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,886,897
Number of Sequences: 3902068
Number of extensions: 4886897
Number of successful extensions: 92211
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 92136
Number of HSP's gapped (non-prelim): 75
length of query: 572
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 549
effective length of database: 17,143,297,704
effective search space: 9411670439496
effective search space used: 9411670439496
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)