>gb|AC140005.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJA1004C08,
             complete sequence
          Length = 138054

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 71/83 (85%)
 Strand = Plus / Minus

                                                                         
Query: 164   gatcaacaccatgtggaaggagatggcagatatcctccacacggaccccgcgaacaccga 223
             ||||||||||||||||||||||||  |||| || ||||||| |||||  ||||||  |||
Sbjct: 86650 gatcaacaccatgtggaaggagataacagacatgctccacatggacctagcgaactgcga 86591

                                    
Query: 224   cctcgaagatcctccttctgcaa 246
             ||||  |||||||||| ||||||
Sbjct: 86590 cctcccagatcctcctcctgcaa 86568

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 71/83 (85%)
 Strand = Plus / Minus

                                                                           
Query: 164     gatcaacaccatgtggaaggagatggcagatatcctccacacggaccccgcgaacaccga 223
               ||||||||||||||||||||||||  |||| || ||||||| |||||  ||||||  |||
Sbjct: 1861788 gatcaacaccatgtggaaggagataacagacatgctccacatggacctagcgaactgcga 1861729

                                      
Query: 224     cctcgaagatcctccttctgcaa 246
               ||||  |||||||||| ||||||
Sbjct: 1861728 cctcccagatcctcctcctgcaa 1861706

>gb|AC099399.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1006F06,
              complete sequence
          Length = 122218

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 71/83 (85%)
 Strand = Plus / Plus

                                                                          
Query: 164    gatcaacaccatgtggaaggagatggcagatatcctccacacggaccccgcgaacaccga 223
              ||||||||||||||||||||||||  |||| || ||||||| |||||  ||||||  |||
Sbjct: 113623 gatcaacaccatgtggaaggagataacagacatgctccacatggacctagcgaactgcga 113682

                                     
Query: 224    cctcgaagatcctccttctgcaa 246
              ||||  |||||||||| ||||||
Sbjct: 113683 cctcccagatcctcctcctgcaa 113705

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 71/83 (85%)
 Strand = Plus / Minus

                                                                           
Query: 164     gatcaacaccatgtggaaggagatggcagatatcctccacacggaccccgcgaacaccga 223
               ||||||||||||||||||||||||  |||| || ||||||| |||||  ||||||  |||
Sbjct: 1861786 gatcaacaccatgtggaaggagataacagacatgctccacatggacctagcgaactgcga 1861727

                                      
Query: 224     cctcgaagatcctccttctgcaa 246
               ||||  |||||||||| ||||||
Sbjct: 1861726 cctcccagatcctcctcctgcaa 1861704

>dbj|AK073032.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023146H06, full
            insert sequence
          Length = 1512

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 65/76 (85%)
 Strand = Plus / Minus

                                                                        
Query: 164  gatcaacaccatgtggaaggagatggcagatatcctccacacggaccccgcgaacaccga 223
            ||||||||||||||||||||||||  |||| || ||||||| |||||  ||||||  |||
Sbjct: 1140 gatcaacaccatgtggaaggagataacagacatgctccacatggacctagcgaactgcga 1081

                            
Query: 224  cctcgaagatcctcct 239
            ||||  ||||||||||
Sbjct: 1080 cctcccagatcctcct 1065

>emb|CR352252.12| Zebrafish DNA sequence from clone CH211-181P13 in linkage group 22,
             complete sequence
          Length = 115241

 Score = 46.1 bits (23), Expect = 0.099
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 50    atttcaagttacaacaacaacaa 72
             |||||||||||||||||||||||
Sbjct: 47305 atttcaagttacaacaacaacaa 47327

>emb|AL135933.11| Human DNA sequence from clone RP4-774E4 on chromosome 11p13-14.2
             Contains a pseudogene similar to ribosomal protein L7a,
             STSs and GSSs, complete sequence
          Length = 111135

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 161   caagatcaacaccatgtggaag 182
             ||||||||||||||||||||||
Sbjct: 24463 caagatcaacaccatgtggaag 24484

>emb|AL033125.1|DMSEG0007 Drosophila melanogaster sequence EG0007: concatenation of cosmids
             30D3:40623-16930, 65G3:42474-1
          Length = 66168

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 61    caacaacaacaatcacatcgat 82
             ||||||||||||||||||||||
Sbjct: 27302 caacaacaacaatcacatcgat 27323

>gb|AC023725.5| Drosophila melanogaster X BAC RP98-9I10 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 165928

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 61    caacaacaacaatcacatcgat 82
             ||||||||||||||||||||||
Sbjct: 54722 caacaacaacaatcacatcgat 54743

>gb|AC105352.2| Drosophila melanogaster X BAC RP98-45O17 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 172784

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 61    caacaacaacaatcacatcgat 82
             ||||||||||||||||||||||
Sbjct: 89732 caacaacaacaatcacatcgat 89753

>ref|NM_167005.1| Drosophila melanogaster Fasciclin 2 CG3665-RC, transcript variant C
            (Fas2), mRNA
          Length = 2873

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 61   caacaacaacaatcacatcgat 82
            ||||||||||||||||||||||
Sbjct: 2747 caacaacaacaatcacatcgat 2768

>gb|AC068388.7| Homo sapiens chromosome 3, clone RP11-296M9, complete sequence
          Length = 148372

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 161   caagatcaacaccatgtggaag 182
             ||||||||||||||||||||||
Sbjct: 52023 caagatcaacaccatgtggaag 52044

>gb|AC097451.2| Homo sapiens BAC clone RP11-1E6 from 4, complete sequence
          Length = 146808

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 51    tttcaagttacaacaacaacaa 72
             ||||||||||||||||||||||
Sbjct: 67730 tttcaagttacaacaacaacaa 67709

>gb|AE003430.4| Drosophila melanogaster chromosome X, section 14 of 74 of the complete
             sequence
          Length = 296227

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 61    caacaacaacaatcacatcgat 82
             ||||||||||||||||||||||
Sbjct: 48344 caacaacaacaatcacatcgat 48323

>gb|M77165.1|DROFAS2A D.melanogaster fasciclin II (Fas2) mRNA, complete cds
          Length = 2818

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 61   caacaacaacaatcacatcgat 82
            ||||||||||||||||||||||
Sbjct: 2691 caacaacaacaatcacatcgat 2712

>emb|AL603652.7| Human DNA sequence from clone RP11-238D24 on chromosome 9, complete
             sequence
          Length = 57507

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 361   tgctgtctggtttttgaaaag 381
             |||||||||||||||||||||
Sbjct: 17743 tgctgtctggtttttgaaaag 17763

>ref|XM_639792.1| Dictyostelium discoideum hypothetical protein (DDB0168905), partial
             mRNA
          Length = 13482

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 60    acaacaacaacaatcacatc 79
             ||||||||||||||||||||
Sbjct: 12732 acaacaacaacaatcacatc 12751

>ref|XM_633681.1| Dictyostelium discoideum hypothetical protein (DDB0185868), partial
           mRNA
          Length = 1389

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 58  ttacaacaacaacaatcaca 77
           ||||||||||||||||||||
Sbjct: 967 ttacaacaacaacaatcaca 986

>ref|XM_629274.1| Dictyostelium discoideum hypothetical protein (DDB0191728), partial
           mRNA
          Length = 4698

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 55  aagttacaacaacaacaatc 74
           ||||||||||||||||||||
Sbjct: 175 aagttacaacaacaacaatc 194

>gb|BT018899.1| Zea mays clone EL01T0207E03.d mRNA sequence
          Length = 1585

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 172 ccatgtggaaggagatggca 191
           ||||||||||||||||||||
Sbjct: 929 ccatgtggaaggagatggca 948

>ref|XM_716961.1| Candida albicans SC5314 hypothetical protein (CaO19_11467), mRNA
          Length = 2517

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 60  acaacaacaacaatcacatc 79
           ||||||||||||||||||||
Sbjct: 285 acaacaacaacaatcacatc 304

>ref|XM_716800.1| Candida albicans SC5314 hypothetical protein (CaO19_3984), mRNA
          Length = 2529

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 60  acaacaacaacaatcacatc 79
           ||||||||||||||||||||
Sbjct: 291 acaacaacaacaatcacatc 310

>gb|AC123537.3| Macaca mulatta clone CH250-75G11, complete sequence
          Length = 172942

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 236   tccttctgcaataccaaaaa 255
             ||||||||||||||||||||
Sbjct: 27013 tccttctgcaataccaaaaa 27032

>gb|AC144721.18| Medicago truncatula clone mth2-11o23, complete sequence
          Length = 135959

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 54     caagttacaacaacaacaat 73
              ||||||||||||||||||||
Sbjct: 132344 caagttacaacaacaacaat 132363

>gb|AC149518.2| Xenopus tropicalis clone CH216-59A18, complete sequence
          Length = 210140

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 53    tcaagttacaacaacaacaa 72
             ||||||||||||||||||||
Sbjct: 10349 tcaagttacaacaacaacaa 10330

>emb|AJ299247.1|NTA299247 Nicotiana tabacum partial mRNA for elongation factor 2 (ef2 gene),
           clone 3cT3
          Length = 540

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 175 tgtggaaggagatggcagat 194
           ||||||||||||||||||||
Sbjct: 81  tgtggaaggagatggcagat 62

>gb|DQ099305.1| Arachis hypogaea clone Ah-576 microsatellite sequence
          Length = 268

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 54 caagttacaacaacaacaatcaca 77
          ||||||||||||||||||| ||||
Sbjct: 16 caagttacaacaacaacaaccaca 39

>gb|DP000005.1| Macaca mulatta target 1 genomic scaffold
          Length = 1678549

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 236     tccttctgcaataccaaaaa 255
               ||||||||||||||||||||
Sbjct: 1463492 tccttctgcaataccaaaaa 1463511

>ref|XM_393472.2| PREDICTED: Apis mellifera similar to ankyrin repeat domain protein 17
            isoform a (LOC409983), mRNA
          Length = 8384

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 60   acaacaacaacaatcacatc 79
            ||||||||||||||||||||
Sbjct: 2079 acaacaacaacaatcacatc 2098

>gb|DP000029.1| Cercopithecus aethiops target 1 genomic scaffold
          Length = 1825024

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 236     tccttctgcaataccaaaaa 255
               ||||||||||||||||||||
Sbjct: 1485633 tccttctgcaataccaaaaa 1485652

>gb|AC010987.9| Homo sapiens BAC clone RP11-553M15 from 2, complete sequence
          Length = 193319

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 164   gatcaacaccatgtggaagg 183
             ||||||||||||||||||||
Sbjct: 65757 gatcaacaccatgtggaagg 65738

>gb|AC117176.2| Dictyostelium discoideum chromosome 2 map 5018074-5200947 strain AX4,
             complete sequence
          Length = 182871

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 60    acaacaacaacaatcacatc 79
             ||||||||||||||||||||
Sbjct: 69603 acaacaacaacaatcacatc 69622

>emb|AJ245998.1|LCU245998 Lens culinaris intergenic spacer, 25S rRNA (partial) and 18S rRNA
           (partial) genes
          Length = 3178

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 95  cttgagttttcttcaagacg 114
           ||||||||||||||||||||
Sbjct: 763 cttgagttttcttcaagacg 744

>emb|AL953867.18| Zebrafish DNA sequence from clone CH211-258L4 in linkage group 22,
             complete sequence
          Length = 177575

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 52    ttcaagttacaacaacaaca 71
             ||||||||||||||||||||
Sbjct: 26096 ttcaagttacaacaacaaca 26077

>gb|AY105873.1| Zea mays PCO094136 mRNA sequence
          Length = 809

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 172 ccatgtggaaggagatggca 191
           ||||||||||||||||||||
Sbjct: 115 ccatgtggaaggagatggca 134

>gb|AC138725.3| Cercopithecus aethiops clone CH252-336C2, complete sequence
          Length = 174407

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 236  tccttctgcaataccaaaaa 255
            ||||||||||||||||||||
Sbjct: 5654 tccttctgcaataccaaaaa 5673

>emb|CT025734.8| Mouse DNA sequence from clone RP24-375J21 on chromosome 14, complete
              sequence
          Length = 187933

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 60     acaacaacaacaatcacatc 79
              ||||||||||||||||||||
Sbjct: 101705 acaacaacaacaatcacatc 101724

>gb|AC138437.3| Cercopithecus aethiops clone CH252-390I5, complete sequence
          Length = 182169

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 236    tccttctgcaataccaaaaa 255
              ||||||||||||||||||||
Sbjct: 181734 tccttctgcaataccaaaaa 181753


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,133,696
Number of Sequences: 3902068
Number of extensions: 4133696
Number of successful extensions: 96093
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 95927
Number of HSP's gapped (non-prelim): 166
length of query: 454
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 432
effective length of database: 17,147,199,772
effective search space: 7407590301504
effective search space used: 7407590301504
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)