>gb|AY107241.1| Zea mays PCO116653 mRNA sequence
          Length = 1069

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 156/192 (81%), Gaps = 1/192 (0%)
 Strand = Plus / Minus

                                                                       
Query: 408 tcgtagacgcccctggcggcgtccttgcggaggagcccgtccttgtccttgccgatgctg 467
           ||||||||||  || ||| |||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 720 tcgtagacgcttctcgcgacgtccttgcggaggaggccgtccttgtccttgccgaggctg 661

                                                                       
Query: 468 tacagcatcttccactccgccgacgcgcccgcccatcctgcgtagtcgctgggctgccgg 527
           || ||  |||||||||||||    ||||| ||||||||   |||||| | |||||  | |
Sbjct: 660 tagagggtcttccactccgcttcagcgccagcccatccgctgtagtccccgggctctctg 601

                                                                       
Query: 528 ttcgcggtgatcagctcgtccacctcggcggacgtcagggcgtcgggcaccgtctttggc 587
           |||||    | ||||| ||| | |||| | |||||||||||||| || || ||||| |||
Sbjct: 600 ttcgcctgcagcagctggtcgatctcgtccgacgtcagggcgtctgggacagtctt-ggc 542

                       
Query: 588 gtgcttggcgaa 599
           ||||||||||||
Sbjct: 541 gtgcttggcgaa 530

>ref|XM_467658.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1568

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 54/61 (88%)
 Strand = Plus / Minus

                                                                        
Query: 424  cggcgtccttgcggaggagcccgtccttgtccttgccgatgctgtacagcatcttccact 483
            |||| |||||||| || || ||||||||||||||||||||  ||||||| ||||||||||
Sbjct: 1216 cggcctccttgcgaagaaggccgtccttgtccttgccgatcttgtacagaatcttccact 1157

             
Query: 484  c 484
            |
Sbjct: 1156 c 1156

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 54/61 (88%)
 Strand = Plus / Minus

                                                                            
Query: 424      cggcgtccttgcggaggagcccgtccttgtccttgccgatgctgtacagcatcttccact 483
                |||| |||||||| || || ||||||||||||||||||||  ||||||| ||||||||||
Sbjct: 30672735 cggcctccttgcgaagaaggccgtccttgtccttgccgatcttgtacagaatcttccact 30672676

                 
Query: 484      c 484
                |
Sbjct: 30672675 c 30672675



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 53/64 (82%)
 Strand = Plus / Minus

                                                                            
Query: 395      gaagaggctgccatcgtagacgcccctggcggcgtccttgcggaggagcccgtccttgtc 454
                ||||| ||| || ||||||||| | ||| ||| ||||||||| ||||   ||||||||||
Sbjct: 30656942 gaagaagctcccgtcgtagacggctctgacggtgtccttgcgaaggatgtcgtccttgtc 30656883

                    
Query: 455      cttg 458
                ||||
Sbjct: 30656882 cttg 30656879

>dbj|AP004880.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0487D09
          Length = 161531

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 54/61 (88%)
 Strand = Plus / Minus

                                                                         
Query: 424   cggcgtccttgcggaggagcccgtccttgtccttgccgatgctgtacagcatcttccact 483
             |||| |||||||| || || ||||||||||||||||||||  ||||||| ||||||||||
Sbjct: 12882 cggcctccttgcgaagaaggccgtccttgtccttgccgatcttgtacagaatcttccact 12823

              
Query: 484   c 484
             |
Sbjct: 12822 c 12822

>dbj|AP005319.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0643A10
          Length = 187931

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 54/61 (88%)
 Strand = Plus / Minus

                                                                          
Query: 424    cggcgtccttgcggaggagcccgtccttgtccttgccgatgctgtacagcatcttccact 483
              |||| |||||||| || || ||||||||||||||||||||  ||||||| ||||||||||
Sbjct: 184743 cggcctccttgcgaagaaggccgtccttgtccttgccgatcttgtacagaatcttccact 184684

               
Query: 484    c 484
              |
Sbjct: 184683 c 184683



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 53/64 (82%)
 Strand = Plus / Minus

                                                                          
Query: 395    gaagaggctgccatcgtagacgcccctggcggcgtccttgcggaggagcccgtccttgtc 454
              ||||| ||| || ||||||||| | ||| ||| ||||||||| ||||   ||||||||||
Sbjct: 168950 gaagaagctcccgtcgtagacggctctgacggtgtccttgcgaaggatgtcgtccttgtc 168891

                  
Query: 455    cttg 458
              ||||
Sbjct: 168890 cttg 168887

>dbj|AK104748.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-F03, full
           insert sequence
          Length = 1058

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 54/61 (88%)
 Strand = Plus / Minus

                                                                       
Query: 424 cggcgtccttgcggaggagcccgtccttgtccttgccgatgctgtacagcatcttccact 483
           |||| |||||||| || || ||||||||||||||||||||  ||||||| ||||||||||
Sbjct: 704 cggcctccttgcgaagaaggccgtccttgtccttgccgatcttgtacagaatcttccact 645

            
Query: 484 c 484
           |
Sbjct: 644 c 644

>dbj|AK070347.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023054E24, full
            insert sequence
          Length = 1568

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 54/61 (88%)
 Strand = Plus / Minus

                                                                        
Query: 424  cggcgtccttgcggaggagcccgtccttgtccttgccgatgctgtacagcatcttccact 483
            |||| |||||||| || || ||||||||||||||||||||  ||||||| ||||||||||
Sbjct: 1216 cggcctccttgcgaagaaggccgtccttgtccttgccgatcttgtacagaatcttccact 1157

             
Query: 484  c 484
            |
Sbjct: 1156 c 1156

>gb|BT017761.1| Zea mays clone EL01N0501F02.c mRNA sequence
          Length = 829

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 57/68 (83%)
 Strand = Plus / Minus

                                                                       
Query: 419 cctggcggcgtccttgcggaggagcccgtccttgtccttgccgatgctgtacagcatctt 478
           |||| ||| ||||||| | ||| ||||||||||||||||| | |   |||||||||||| 
Sbjct: 664 cctgacggtgtccttgggcaggcgcccgtccttgtccttggccagcttgtacagcatctc 605

                   
Query: 479 ccactccg 486
           ||||||||
Sbjct: 604 ccactccg 597

>gb|AY110261.1| Zea mays CL44026_1 mRNA sequence
          Length = 837

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 57/68 (83%)
 Strand = Plus / Plus

                                                                       
Query: 419 cctggcggcgtccttgcggaggagcccgtccttgtccttgccgatgctgtacagcatctt 478
           |||| ||| ||||||| | ||| ||||||||||||||||| | |   |||||||||||| 
Sbjct: 189 cctgacggtgtccttgggcaggcgcccgtccttgtccttggccagcttgtacagcatctc 248

                   
Query: 479 ccactccg 486
           ||||||||
Sbjct: 249 ccactccg 256

>ref|XM_369746.1| Magnaporthe grisea 70-15 hypothetical protein (MG06261.4) partial
            mRNA
          Length = 3912

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 578  cgtctttggcgtgcttggcga 598
            |||||||||||||||||||||
Sbjct: 3649 cgtctttggcgtgcttggcga 3629

>gb|DQ234055.1| Streptomyces argillaceus strain ATCC 12956 RecF (recF) gene,
           complete cds
          Length = 1277

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 530 cgcggtgatcagctcgtcca 549
           ||||||||||||||||||||
Sbjct: 468 cgcggtgatcagctcgtcca 449

>ref|XM_467657.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 507

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 53/64 (82%)
 Strand = Plus / Minus

                                                                       
Query: 395 gaagaggctgccatcgtagacgcccctggcggcgtccttgcggaggagcccgtccttgtc 454
           ||||| ||| || ||||||||| | ||| ||| ||||||||| ||||   ||||||||||
Sbjct: 477 gaagaagctcccgtcgtagacggctctgacggtgtccttgcgaaggatgtcgtccttgtc 418

               
Query: 455 cttg 458
           ||||
Sbjct: 417 cttg 414

>ref|XM_450739.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 711

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 424 cggcgtccttgcggaggagc 443
           ||||||||||||||||||||
Sbjct: 481 cggcgtccttgcggaggagc 462

>gb|AC149215.3| Mus musculus BAC clone RP24-201G21 from chromosome 7, complete sequence
          Length = 174164

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 441   agcccgtccttgtccttgcc 460
             ||||||||||||||||||||
Sbjct: 17451 agcccgtccttgtccttgcc 17432

>emb|AL445932.12| Human DNA sequence from clone RP11-533L1 on chromosome 6 Contains the
             5' end of a novel gene, complete sequence
          Length = 163650

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 113   ctattttaacattaatttagcagt 136
             ||||||||||||||||| ||||||
Sbjct: 16208 ctattttaacattaattcagcagt 16185

>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 442     gcccgtccttgtccttgccg 461
               ||||||||||||||||||||
Sbjct: 1912514 gcccgtccttgtccttgccg 1912495

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 424      cggcgtccttgcggaggagc 443
                ||||||||||||||||||||
Sbjct: 12507488 cggcgtccttgcggaggagc 12507507

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                               
Query: 527     gttcgcggtgatcagctcgtccacctcggcgg 558
               ||||| ||||| |||| |||||||||||||||
Sbjct: 2775637 gttcgaggtgaacagcgcgtccacctcggcgg 2775668

>dbj|AP005637.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0711A01
          Length = 162400

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 424   cggcgtccttgcggaggagc 443
             ||||||||||||||||||||
Sbjct: 22815 cggcgtccttgcggaggagc 22834

>dbj|AP000478.6| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-14E22, complete
              sequence
          Length = 121689

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 338    ccatcatgcctgggtttctt 357
              ||||||||||||||||||||
Sbjct: 103761 ccatcatgcctgggtttctt 103742

>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 536     gatcagctcgtccacctcgg 555
               ||||||||||||||||||||
Sbjct: 1570283 gatcagctcgtccacctcgg 1570264

>emb|AL805921.7| Mouse DNA sequence from clone RP23-293N9 on chromosome 4, complete
              sequence
          Length = 162090

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 115    attttaacattaatttagca 134
              ||||||||||||||||||||
Sbjct: 138324 attttaacattaatttagca 138305


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,229,927
Number of Sequences: 3902068
Number of extensions: 3229927
Number of successful extensions: 60402
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 60006
Number of HSP's gapped (non-prelim): 393
length of query: 604
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 581
effective length of database: 17,143,297,704
effective search space: 9960255966024
effective search space used: 9960255966024
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)