| Clone Name | rbags30d07 |
|---|---|
| Clone Library Name | barley_pub |
>RAD50_PYRFU (P58301) DNA double-strand break repair rad50 ATPase| Length = 882 Score = 38.5 bits (88), Expect = 0.021 Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 14/106 (13%) Frame = -2 Query: 670 ELDQIGDQIMERLDSKMQSYEE------TAEMQRQEIEMNERVLE--------DFEDWIE 533 +L+ G + +E LDSK++ EE T ++E+E+ +R + FE+ E Sbjct: 581 KLESFGFKSVEDLDSKLRELEEIYKRYLTLLNSKKELEITQREIAKAKETLEMSFEELAE 640 Query: 532 EEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSK 395 E + K L ++K+ N EE K K + + + +E+A A K Sbjct: 641 VEADIERIEKKLSQLKQKYNEEEYKKKREEKEELEKELARLEAQKK 686 Score = 32.0 bits (71), Expect = 1.9 Identities = 25/84 (29%), Positives = 42/84 (50%) Frame = -2 Query: 682 NAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFK 503 N+ KEL+ +I + ++ S+EE AE++ +IE E+ L + EE+ Sbjct: 612 NSKKELEITQREIAKAKETLEMSFEELAEVE-ADIERIEKKLSQLKQKYNEEEY------ 664 Query: 502 SLGKVKKPQNNEEIKVKAKIEAQK 431 K K+ + E K A++EAQK Sbjct: 665 ---KKKREEKEELEKELARLEAQK 685
>MYO6_HUMAN (Q9UM54) Myosin-6 (Myosin VI)| Length = 1285 Score = 37.4 bits (85), Expect = 0.046 Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 12/108 (11%) Frame = -2 Query: 694 MIGQNAMKELDQI---GDQIMERLDSKMQSYEETAEMQRQEIEMNE---RVLEDFEDWIE 533 M + KE D + ++++ L K Q EE ++R + EM + R ED + + Sbjct: 890 MTQEQIQKEYDALVKSSEELLSALQKKKQQEEEAERLRRIQEEMEKERKRREEDEKRRRK 949 Query: 532 EEKNEGMFFKSLGKVK------KPQNNEEIKVKAKIEAQKVREIAEES 407 EE+ M + K K K + ++E +++A++EAQ R+ EES Sbjct: 950 EEEERRMKLEMEAKRKQEEEERKKREDDEKRIQAEVEAQLARQKEEES 997
>MYO6_MOUSE (Q64331) Myosin-6 (Myosin VI)| Length = 1265 Score = 36.2 bits (82), Expect = 0.10 Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 12/108 (11%) Frame = -2 Query: 694 MIGQNAMKELDQI---GDQIMERLDSKMQSYEETAEMQRQEIEMNE---RVLEDFEDWIE 533 M + KE D + + ++ L K Q EE ++R + EM + R ED E + Sbjct: 893 MTREQIQKEYDALVKSSEDLLSALQKKKQQEEEAERLRRIQEEMEKERKRREEDEERRRK 952 Query: 532 EEKNEGMFFKSLGKVK------KPQNNEEIKVKAKIEAQKVREIAEES 407 EE+ M + K K K + ++E ++++++EAQ R+ EES Sbjct: 953 EEEERRMKLEMEPKRKQEEEERKKREDDEKRIQSEVEAQLARQREEES 1000
>UPF3_YEAST (P48412) Nonsense-mediated mRNA decay protein 3 (Up-frameshift| suppressor 3) Length = 387 Score = 36.2 bits (82), Expect = 0.10 Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 6/104 (5%) Frame = -2 Query: 682 NAMKEL---DQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGM 512 N+MK+L D+ Q L S + + ++ E++ + E ERVL + ++ KN+ Sbjct: 216 NSMKQLNENDEYSFQDFSVLKSLEKEFSKSIELENKIAERTERVLTELVGTGDKVKNKNK 275 Query: 511 FFKSLG---KVKKPQNNEEIKVKAKIEAQKVREIAEESAGSKTR 389 K+ K K+ + + +I K + +K RE E+S SKT+ Sbjct: 276 KKKNKNAKKKFKEEEASAKIPKKKRNRGKKKRENREKSTISKTK 319
>TNNT_CAEEL (Q27371) Troponin T| Length = 405 Score = 35.4 bits (80), Expect = 0.18 Identities = 20/75 (26%), Positives = 44/75 (58%), Gaps = 2/75 (2%) Frame = -2 Query: 628 SKMQSYEETAEMQRQEIEMNERVLEDFEDW--IEEEKNEGMFFKSLGKVKKPQNNEEIKV 455 +K+ YE+ +++++IE R L++ ++ E E++E F + + + + EE + Sbjct: 80 AKLLDYEQRRVLEKEQIEQELRELKEKQEKRRAEREEDERQFAERRRQDDERRRKEEDER 139 Query: 454 KAKIEAQKVREIAEE 410 KAK +A+K+R+ E+ Sbjct: 140 KAKADAEKIRKNEEK 154
>TCF8_HUMAN (P37275) Transcription factor 8 (NIL-2-A zinc finger protein)| (Negative regulator of IL2) Length = 1124 Score = 35.4 bits (80), Expect = 0.18 Identities = 26/100 (26%), Positives = 52/100 (52%), Gaps = 2/100 (2%) Frame = -2 Query: 685 QNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDF--EDWIEEEKNEGM 512 ++ +E D+ ++ E D +M+ +E E ++ + + E E+ E+ +EE +NEG Sbjct: 1026 ESLTREEDEDSEKEEEEEDKEMEELQEEKECEKPQGDEEEEEEEEEVEEEEVEEAENEGE 1085 Query: 511 FFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSKT 392 K+ G +K ++ + +A QKV E +E+ + KT Sbjct: 1086 EAKTEGLMK----DDRAESQASSLGQKVGESSEQVSEEKT 1121
>SAP1_SCHPO (P40847) Switch-activating protein 1| Length = 254 Score = 35.0 bits (79), Expect = 0.23 Identities = 24/80 (30%), Positives = 45/80 (56%), Gaps = 3/80 (3%) Frame = -2 Query: 670 ELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGK 491 ELDQ+ D+ RL S++Q Y E + +++ + N+ + E + EE++N M + Sbjct: 111 ELDQLCDEWKARL-SELQQYREKFLVGKRKCDCNDEINERLKKLTEEQQNVDMLVAKVNF 169 Query: 490 VKKP-QNNEE--IKVKAKIE 440 + K +NEE ++V AK++ Sbjct: 170 LSKHLHDNEEKLMQVNAKMD 189
>TIG_OCEIH (Q8CXB7) Trigger factor (TF)| Length = 428 Score = 34.7 bits (78), Expect = 0.30 Identities = 20/94 (21%), Positives = 47/94 (50%) Frame = -2 Query: 691 IGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGM 512 I + KEL ++ D+ + +D +++S +E + +R E+E N++ +E +K E + Sbjct: 239 INEVKAKELPELDDEFAKDVDEEVESLDELKKKKRNELETNKK------QEVENKKREEL 292 Query: 511 FFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEE 410 ++K +N E+ + + +V ++ E Sbjct: 293 -------IQKASDNVEVDIPEAMVDTEVNQMVRE 319
>REN3B_HUMAN (Q9BZI7) Regulator of nonsense transcripts 3B (Nonsense mRNA| reducing factor 3B) (Up-frameshift suppressor 3 homolog B) (hUpf3B) (hUpf3p-X) Length = 483 Score = 33.9 bits (76), Expect = 0.51 Identities = 17/60 (28%), Positives = 32/60 (53%) Frame = -2 Query: 610 EETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQK 431 E+ E +R+EIE + E+ W EEEK + + L K+ + +++K + KI+ + Sbjct: 213 EKREERRRREIERKRQREEERRKWKEEEKRKRKDIEKLKKIDRIPERDKLKDEPKIKVHR 272
>Y1505_METJA (Q58900) Putative ATP-dependent RNA helicase MJ1505 (EC 3.6.1.-)| Length = 778 Score = 33.9 bits (76), Expect = 0.51 Identities = 33/118 (27%), Positives = 59/118 (50%), Gaps = 7/118 (5%) Frame = -2 Query: 628 SKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGM-----FFKSLGKVKKPQNNEE 464 SK + EET E++ +EIE V E+ ++ EEEK + F K + +VK+ +EE Sbjct: 504 SKEEIKEETEEIKEKEIESKTAVKEETKE--EEEKTKKPVTILDFIKQI-EVKERSKSEE 560 Query: 463 IKVKAKIEAQK--VREIAEESAGSKTRMNIYLALMAILGLTIANAVFATPEVEWRKVA 296 K+K +I+ K ++ I + + ++ A + + L + + V + V RK A Sbjct: 561 DKIKQEIKIPKKPIKIIVDVREKNMAKLLHNYANIELKTLEVGDYVLSDRVVVERKTA 618
>PRIL_METBF (Q46E38) Probable DNA primase large subunit (EC 2.7.7.-)| Length = 413 Score = 33.9 bits (76), Expect = 0.51 Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 1/82 (1%) Frame = -2 Query: 652 DQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQN 473 D++ E+++ + YE+ ++ +E EM + E E +EEK E + ++KK + Sbjct: 314 DRLCEKINHPLAYYEKKIYLKNKEKEMEKEKEEKEEKEKQEEKKEEEEKEKQEEIKKKKK 373 Query: 472 NEEIKVKA-KIEAQKVREIAEE 410 E+ + K KI+ K RE +E Sbjct: 374 KEKQEEKGKKIKEGKKRERKQE 395
>FAR10_YEAST (Q06001) Factor arrest protein 10| Length = 478 Score = 33.9 bits (76), Expect = 0.51 Identities = 24/97 (24%), Positives = 50/97 (51%), Gaps = 1/97 (1%) Frame = -2 Query: 682 NAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFK 503 N L+ ++E+ D ++ + ++R+ E+++E + +++ + + MFFK Sbjct: 312 NYTTHLEYTNKLLVEKNDQQLVKLQNG--LRRKLSGKYEKIIEQNRNQVKQLERDHMFFK 369 Query: 502 SLGKVKKPQNNEEIK-VKAKIEAQKVREIAEESAGSK 395 +VKK +NNE+ K ++ +IE K R E S+ Sbjct: 370 KSFEVKKRRNNEKQKSMEREIEDLKTRLEVERYKNSQ 406
>CING_MOUSE (P59242) Cingulin| Length = 1191 Score = 33.5 bits (75), Expect = 0.67 Identities = 25/104 (24%), Positives = 54/104 (51%), Gaps = 11/104 (10%) Frame = -2 Query: 673 KELDQIGDQ---IMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFK 503 KEL+QIGD +++L ++M+ Y+E A R+E+ +R +D+ E EKN G + Sbjct: 844 KELEQIGDDSKLALQQLQAQMEDYKEKA---RKEVADAQRQAKDWAS--EAEKNSGGLSR 898 Query: 502 SLGKVKK--------PQNNEEIKVKAKIEAQKVREIAEESAGSK 395 ++++ + ++ ++ AQ+++ + +E+ K Sbjct: 899 LQDELQRLRQALQTSQAERDTARLDKELLAQRLQGLEQEAENKK 942
>HEM1_METMP (Q6M130) Glutamyl-tRNA reductase (EC 1.2.1.70) (GluTR)| Length = 382 Score = 33.5 bits (75), Expect = 0.67 Identities = 25/91 (27%), Positives = 50/91 (54%), Gaps = 6/91 (6%) Frame = -2 Query: 715 DADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAE-----MQRQEIEMN-ERVLE 554 DA EF+ I + +L I D+ +++ ++ + E+ + + +Q ++N E VL+ Sbjct: 256 DAVREFENINLYTIDDLRNISDKNLQKRIEEVPAVEKIIDEEYDVLMKQIEKINVEEVLK 315 Query: 553 DFEDWIEEEKNEGMFFKSLGKVKKPQNNEEI 461 DF ++IEE + + + + K+ K +N EEI Sbjct: 316 DFNNYIEEIRTKEL--EKAIKLSKTKNPEEI 344
>TIG_STAES (Q8CNY4) Trigger factor (TF)| Length = 433 Score = 33.1 bits (74), Expect = 0.87 Identities = 29/104 (27%), Positives = 50/104 (48%) Frame = -2 Query: 715 DADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWI 536 D T + + GQN + DQ+ D +R+ + + TA + IE+++ ED + Sbjct: 330 DLQTYYQISGQNEEQLRDQMKDDAEQRVKTNLTL---TAIADEENIEVSD---EDIDK-- 381 Query: 535 EEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESA 404 E EK F S+ +K N +I VK + QKV ++ ++A Sbjct: 382 ELEKMSEQFNISVEDIKSTLGNTDI-VKNDVRIQKVIDLLRDNA 424
>TIG_STAEQ (Q5HNM8) Trigger factor (TF)| Length = 433 Score = 33.1 bits (74), Expect = 0.87 Identities = 29/104 (27%), Positives = 50/104 (48%) Frame = -2 Query: 715 DADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWI 536 D T + + GQN + DQ+ D +R+ + + TA + IE+++ ED + Sbjct: 330 DLQTYYQISGQNEEQLRDQMKDDAEQRVKTNLTL---TAIADEENIEVSD---EDIDK-- 381 Query: 535 EEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESA 404 E EK F S+ +K N +I VK + QKV ++ ++A Sbjct: 382 ELEKMSEQFNISVEDIKSTLGNTDI-VKNDVRIQKVIDLLRDNA 424
>RPOC_XANC5 (Q3BWZ0) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1404 Score = 32.7 bits (73), Expect = 1.1 Identities = 13/49 (26%), Positives = 31/49 (63%) Frame = -2 Query: 538 IEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSKT 392 +E +K EGM F + +VK+ +N +++ AK++ ++ ++ E+ G ++ Sbjct: 517 LENKKGEGMVFANTSEVKRAYDNRVVELHAKVKV-RITQVDVEAGGKRS 564
>RPOC_XANAC (Q8PNS9) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1404 Score = 32.7 bits (73), Expect = 1.1 Identities = 13/49 (26%), Positives = 31/49 (63%) Frame = -2 Query: 538 IEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSKT 392 +E +K EGM F + +VK+ +N +++ AK++ ++ ++ E+ G ++ Sbjct: 517 LENKKGEGMVFANTSEVKRAYDNRVVELHAKVKV-RITQVDVEAGGKRS 564
>RAD50_METMP (P62134) DNA double-strand break repair rad50 ATPase| Length = 993 Score = 32.7 bits (73), Expect = 1.1 Identities = 25/105 (23%), Positives = 51/105 (48%) Frame = -2 Query: 652 DQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQN 473 ++ E+++ +SYEET E+ +LE+ E ++ E +E K +KK +N Sbjct: 161 EKASEKMNIVKKSYEETLLKLEGELTQEPEILENLEK-LKNEVSESEILKE-EILKKYEN 218 Query: 472 NEEIKVKAKIEAQKVREIAEESAGSKTRMNIYLALMAILGLTIAN 338 E++K++ E ++ E E+ K + ++ + + L I N Sbjct: 219 LEKLKLEKNSEILQMEEKFAENNQLKENLKDIISEIKNINLEIQN 263
>GIDA_BACC1 (Q72WU4) tRNA uridine 5-carboxymethylaminomethyl modification| enzyme gidA (Glucose-inhibited division protein A) Length = 629 Score = 32.7 bits (73), Expect = 1.1 Identities = 25/95 (26%), Positives = 45/95 (47%) Frame = -2 Query: 691 IGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGM 512 IG + +K+ G + + L +YE + E+E+++ V E E I K EG Sbjct: 498 IGGSELKD----GIRASDLLRRPEMTYEHIHLLVPSEVELSDEVTEQVEIQI---KYEGY 550 Query: 511 FFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEES 407 KSL +V++ + E K+ I+ + +A E+ Sbjct: 551 IEKSLQQVERMKKMESKKIPVDIDYDAISSLASEA 585
>DREB_MOUSE (Q9QXS6) Drebrin (Developmentally-regulated brain protein)| Length = 705 Score = 32.7 bits (73), Expect = 1.1 Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 4/89 (4%) Frame = -2 Query: 634 LDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKV 455 LD++++ +E E +RQE E ER + E IEE + +K Q+ E + Sbjct: 199 LDARLRFEQERMEQERQEQEERERRYREREQQIEEHR------------RKQQSLEAEEA 246 Query: 454 KAKIEAQKV----REIAEESAGSKTRMNI 380 K +++ Q + R+ EES K+ + Sbjct: 247 KRRLKEQSIFGDQRDEEEESQMKKSESEV 275
>RPOC_XYLFA (Q9PA87) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1407 Score = 32.7 bits (73), Expect = 1.1 Identities = 13/53 (24%), Positives = 33/53 (62%) Frame = -2 Query: 538 IEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSKTRMNI 380 +E +K EGM F + ++K+ +N +++ AK++ ++ EI + G +++ ++ Sbjct: 517 LENKKGEGMVFANTSELKRAYDNSVVELHAKVKV-RITEIETDDRGLRSKASL 568
>SMC2_HUMAN (O95347) Structural maintenance of chromosome 2-like 1 protein| (Chromosome-associated protein E) (hCAP-E) (XCAP-E homolog) Length = 1197 Score = 32.7 bits (73), Expect = 1.1 Identities = 28/118 (23%), Positives = 51/118 (43%), Gaps = 16/118 (13%) Frame = -2 Query: 685 QNAMKELDQ-----IGDQIMERLDSKMQSYEETAEMQ------RQEIEMNERVLEDFEDW 539 Q M+E++ I Q + D+K++S EE EMQ ++E+ N++ ++ Sbjct: 221 QKVMREIEHLSRLYIAYQFLLAEDTKVRSAEELKEMQDKVIKLQEELSENDKKIKALNHE 280 Query: 538 IEE-----EKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSKTRMNI 380 IEE +K G+ +SL K ++ + +K EES + N+ Sbjct: 281 IEELEKRKDKETGVILRSLEDALAEAQRVNTKSQSAFDLKKKNLACEESKRKELEKNM 338
>MPP10_HUMAN (O00566) U3 small nucleolar ribonucleoprotein protein MPP10 (M| phase phosphoprotein 10) Length = 681 Score = 32.7 bits (73), Expect = 1.1 Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 14/102 (13%) Frame = -2 Query: 715 DADTEFDMI-----------GQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMN 569 D+D +FD+ GQ +E + D+ + S+M++Y E E + + + N Sbjct: 170 DSDLDFDISKLEQQSKVQNKGQGKPREKSIVDDKFFKL--SEMEAYLENIEKEEERKDDN 227 Query: 568 ERVLED---FEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVK 452 + ED FED I+ +++EG F S K+K +++ +K K Sbjct: 228 DEEEEDIDFFED-IDSDEDEGGLFGS-KKLKSGKSSRNLKYK 267
>USO1_YEAST (P25386) Intracellular protein transport protein USO1 (Int-1)| Length = 1790 Score = 32.3 bits (72), Expect = 1.5 Identities = 22/115 (19%), Positives = 58/115 (50%), Gaps = 6/115 (5%) Frame = -2 Query: 709 DTEFDMIGQNAMKELDQIGDQIMERLDSK------MQSYEETAEMQRQEIEMNERVLEDF 548 D + I ++ ++L+ + +Q+ +SK ++ EE + ++ E+E ++ +++ Sbjct: 1451 DEKLLSIERDNKRDLESLKEQLRAAQESKAKVEEGLKKLEEESSKEKAELEKSKEMMKKL 1510 Query: 547 EDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSKTRMN 383 E I E NE S+ ++K ++E+++ K + ++ + E + +R+N Sbjct: 1511 ESTI--ESNETELKSSMETIRK--SDEKLEQSKKSAEEDIKNLQHEKSDLISRIN 1561
>GIDA_BACHK (Q6HAF3) tRNA uridine 5-carboxymethylaminomethyl modification| enzyme gidA (Glucose-inhibited division protein A) Length = 629 Score = 32.3 bits (72), Expect = 1.5 Identities = 25/95 (26%), Positives = 45/95 (47%) Frame = -2 Query: 691 IGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGM 512 IG + +K+ G + + L +YE + E+E+++ V E E I K EG Sbjct: 498 IGGSELKD----GIRASDLLRRPEMTYEHIHLLVPSEVELSDEVKEQVEIQI---KYEGY 550 Query: 511 FFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEES 407 KSL +V++ + E K+ I+ + +A E+ Sbjct: 551 IEKSLQQVERMKKMENKKIPVDIDYDAISSLASEA 585
>GIDA_BACAN (Q81JH3) tRNA uridine 5-carboxymethylaminomethyl modification| enzyme gidA (Glucose-inhibited division protein A) Length = 629 Score = 32.3 bits (72), Expect = 1.5 Identities = 25/95 (26%), Positives = 45/95 (47%) Frame = -2 Query: 691 IGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGM 512 IG + +K+ G + + L +YE + E+E+++ V E E I K EG Sbjct: 498 IGGSELKD----GIRASDLLRRPEMTYEHIHLLVPSEVELSDEVKEQVEIQI---KYEGY 550 Query: 511 FFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEES 407 KSL +V++ + E K+ I+ + +A E+ Sbjct: 551 IEKSLQQVERMKKMENKKIPVDIDYDAISSLASEA 585
>DREB_RAT (Q07266) Drebrin (Developmentally-regulated brain protein)| Length = 706 Score = 32.3 bits (72), Expect = 1.5 Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 4/89 (4%) Frame = -2 Query: 634 LDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKV 455 LD++++ +E E +RQE E ER + E IEE + +K Q+ E + Sbjct: 199 LDARLRFEQERMEQERQEQEERERRYREREQQIEEHR------------RKQQSLEAEEA 246 Query: 454 KAKIEAQKV----REIAEESAGSKTRMNI 380 K +++ Q + R+ EES K+ + Sbjct: 247 KRRLKDQSIFGDQRDEEEESQMKKSESEV 275
>Y1739_STRPN (P67282) UPF0144 protein SP1739| Length = 534 Score = 32.3 bits (72), Expect = 1.5 Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 7/107 (6%) Frame = -2 Query: 715 DADTEFDMIGQNAMKELDQIGDQIMERL------DSKMQSYEETAEMQRQEIEMNERVLE 554 + D EF ++ +EL QI ++ ER D + S E+T E + Q I + L+ Sbjct: 86 EVDAEF----KSERQELKQIESRLTERATSLDRKDDNLTSKEQTLEQKEQSISDRAKNLD 141 Query: 553 DFEDWIEE-EKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIA 416 E+ +EE E+ + + +G + + + + I A+ E REIA Sbjct: 142 AREEQLEEVERQKEAELERIGALSQAEARDII--LAQTEENLTREIA 186
>Y1584_STRR6 (P67283) UPF0144 protein spr1584| Length = 534 Score = 32.3 bits (72), Expect = 1.5 Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 7/107 (6%) Frame = -2 Query: 715 DADTEFDMIGQNAMKELDQIGDQIMERL------DSKMQSYEETAEMQRQEIEMNERVLE 554 + D EF ++ +EL QI ++ ER D + S E+T E + Q I + L+ Sbjct: 86 EVDAEF----KSERQELKQIESRLTERATSLDRKDDNLTSKEQTLEQKEQSISDRAKNLD 141 Query: 553 DFEDWIEE-EKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIA 416 E+ +EE E+ + + +G + + + + I A+ E REIA Sbjct: 142 AREEQLEEVERQKEAELERIGALSQAEARDII--LAQTEENLTREIA 186
>Y164_METJA (Q57628) Hypothetical protein MJ0164| Length = 395 Score = 32.3 bits (72), Expect = 1.5 Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 8/107 (7%) Frame = -2 Query: 676 MKELDQIGDQIMERLDS--------KMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKN 521 MK LD+ ++ E+ DS + EE + + R+E+ + E E+WIE Sbjct: 239 MKILDENENKSSEKADSLESEGSITTAEEIEEESTVSREELLKKLGIKEPDENWIE---- 294 Query: 520 EGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSKTRMNI 380 L V +P + E ++K KIE++ V ++ S +N+ Sbjct: 295 -----TILEDVFRPSDEELEELKEKIESEIVNKVKRMEGVSDVLVNL 336
>TRIPB_HUMAN (Q15643) Thyroid receptor-interacting protein 11 (TRIP-11)| (Golgi-associated microtubule-binding protein 210) (GMAP-210) (Trip230) (Clonal evolution related gene on chromosome 14) Length = 1979 Score = 32.0 bits (71), Expect = 1.9 Identities = 20/92 (21%), Positives = 43/92 (46%) Frame = -2 Query: 685 QNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFF 506 QN +E+D ++ ++ Q E + R+E+ E +E+ E+ + ++ G+ Sbjct: 223 QNRSQEIDDHQHEMSVLQNAHQQKLTEISRRHREELSDYEERIEELENLL-QQGGSGVIE 281 Query: 505 KSLGKVKKPQNNEEIKVKAKIEAQKVREIAEE 410 L K+ + Q ++ K+E+ K E E+ Sbjct: 282 TDLSKIYEMQKTIQVLQIEKVESTKKMEQLED 313
>SMI2_DEBHA (Q6BJY4) KNR4/SMI1 homolog 2| Length = 590 Score = 32.0 bits (71), Expect = 1.9 Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 6/94 (6%) Frame = -2 Query: 673 KELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLG 494 K+ D+I ++ E +++ + ++ E + QE E + + E+ E+E+NE K L Sbjct: 495 KQKDEIIEEKPEVIETPAKEDDKEEEEEEQEEEKEQEKEHENEEAPEDEQNEDA--KPLT 552 Query: 493 KVKKPQNNEEIKVKAKIEAQK------VREIAEE 410 K +K N+ K K + + QK V E+AE+ Sbjct: 553 KTQK--KNQSKKAKKQQQKQKQNETNDVEEVAED 584
>POLG_POL2L (P06210) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat| protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein P2A); Core protein P2B; Core protein P2C; Core protein P3A; Genome Length = 2206 Score = 32.0 bits (71), Expect = 1.9 Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 5/84 (5%) Frame = -2 Query: 469 EEIKVKAKIEAQKVREIAEESAGSKTRM-----NIYLALMAILGLTIANAVFATPEVEWR 305 +E++ K K+E K R I S M N+Y A G+ +AV P++ W Sbjct: 1905 DELRSKTKVEQGKSRLIEASSLNDSVAMRMAFGNLYAAFHKNPGVVTGSAVGCDPDLFWS 1964 Query: 304 KVAALGLIFIGLVAQVTYEQDISP 233 K+ L + Y+ +SP Sbjct: 1965 KIPVLMEEKLFAFDYTGYDASLSP 1988
>YR445_MIMIV (Q5UQP3) DnaJ-like protein R445| Length = 368 Score = 32.0 bits (71), Expect = 1.9 Identities = 14/55 (25%), Positives = 35/55 (63%), Gaps = 3/55 (5%) Frame = -2 Query: 592 QRQEIEMNERVLEDFE---DWIEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEA 437 ++Q E N+R++ + + D+++ +K F S+G++K+P N +++ K +++A Sbjct: 73 EKQRNEYNQRLIVEKQACSDYLKLKKRYNDFADSIGELKEPSNEQKLSFKEQMKA 127
>RPOC_XYLFT (Q87A33) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1407 Score = 32.0 bits (71), Expect = 1.9 Identities = 16/71 (22%), Positives = 39/71 (54%) Frame = -2 Query: 538 IEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSKTRMNIYLALMAI 359 +E +K EGM F + ++K+ +N +++ AK++ ++ EI + G + + + +I Sbjct: 517 LENKKGEGMVFANTSELKRAYDNSVVELHAKVKV-RITEIETDDQGLRNKAS------SI 569 Query: 358 LGLTIANAVFA 326 + T+ A+ + Sbjct: 570 VDTTVGRALLS 580
>POLG_CXA24 (P36290) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat| protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein P2A); Core protein P2B; Core protein P2C; Core protein P3A; Genome Length = 2213 Score = 32.0 bits (71), Expect = 1.9 Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 5/84 (5%) Frame = -2 Query: 469 EEIKVKAKIEAQKVREIAEESAGSKTRM-----NIYLALMAILGLTIANAVFATPEVEWR 305 +E++ K K+E K R I S M N+Y A G+ +AV P++ W Sbjct: 1912 DELRSKTKVEQGKSRLIEASSLNDSVAMRMAFGNLYAAFHKNPGVVTGSAVGCDPDLFWS 1971 Query: 304 KVAALGLIFIGLVAQVTYEQDISP 233 K+ L + Y+ +SP Sbjct: 1972 KIPVLMEEKLFAFDYTGYDASLSP 1995
>TIG_HELHP (Q7VIN8) Trigger factor (TF)| Length = 442 Score = 32.0 bits (71), Expect = 1.9 Identities = 34/123 (27%), Positives = 64/123 (52%), Gaps = 19/123 (15%) Frame = -2 Query: 673 KELDQIGDQIMERL---DSKMQS----YEETAEM-QRQEI---EMNERVLE--------D 551 KEL +I D+ + + +S +QS +E EM Q+ EI E+ E+++E D Sbjct: 247 KELPKIDDEFAKSIAGEESNLQSLKDMIKEQLEMEQKTEIYNKELKEKLVEILLKNISFD 306 Query: 550 FEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSKTRMNIYLA 371 D I E++ + +F +L ++ KP+ ++IK + EA+K RE ++ A ++ + Sbjct: 307 LPDLIVEQEMDILFRNALSQL-KPEEFDKIK-NNQDEAKKQRETHKDEARKSVQITFIMD 364 Query: 370 LMA 362 +A Sbjct: 365 ALA 367
>POLG_POL3L (P03302) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat| protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein P2A); Core protein P2B; Core protein P2C; Core protein P3A; Genome Length = 2205 Score = 32.0 bits (71), Expect = 1.9 Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 5/84 (5%) Frame = -2 Query: 469 EEIKVKAKIEAQKVREIAEESAGSKTRM-----NIYLALMAILGLTIANAVFATPEVEWR 305 +E++ K K+E K R I S M N+Y A G+ +AV P++ W Sbjct: 1904 DELRSKTKVEQGKSRLIEASSLNDSVAMRMAFGNLYAAFHRNPGVVTGSAVGCDPDLFWS 1963 Query: 304 KVAALGLIFIGLVAQVTYEQDISP 233 K+ L + Y+ +SP Sbjct: 1964 KIPVLMEEKLFAFDYTGYDASLSP 1987
>POLG_POL32 (P06209) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat| protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein P2A); Core protein P2B; Core protein P2C; Core protein P3A; Genome Length = 2205 Score = 32.0 bits (71), Expect = 1.9 Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 5/84 (5%) Frame = -2 Query: 469 EEIKVKAKIEAQKVREIAEESAGSKTRM-----NIYLALMAILGLTIANAVFATPEVEWR 305 +E++ K K+E K R I S M N+Y A G+ +AV P++ W Sbjct: 1904 DELRSKTKVEQGKSRLIEASSLNDSVAMRMAFGNLYAAFHKNPGVVTGSAVGCDPDLFWS 1963 Query: 304 KVAALGLIFIGLVAQVTYEQDISP 233 K+ L + Y+ +SP Sbjct: 1964 KIPVLMEEKLFAFDYTGYDASLSP 1987
>POLG_CXA21 (P22055) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat| protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein P2A); Core protein P2B; Core protein P2C; Core protein P3A; Genome Length = 2205 Score = 32.0 bits (71), Expect = 1.9 Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 5/84 (5%) Frame = -2 Query: 469 EEIKVKAKIEAQKVREIAEESAGSKTRM-----NIYLALMAILGLTIANAVFATPEVEWR 305 +E++ K K+E K R I S M N+Y A G+ +AV P++ W Sbjct: 1904 DELRSKTKVEQGKSRLIEASSLNDSVAMRMAFGNLYAAFHKNPGVVTGSAVGCDPDLFWS 1963 Query: 304 KVAALGLIFIGLVAQVTYEQDISP 233 K+ L + Y+ +SP Sbjct: 1964 KIPVLMEEKLFAFDYTGYDASLSP 1987
>PLEC1_HUMAN (Q15149) Plectin-1 (PLTN) (PCN) (Hemidesmosomal protein 1) (HD1)| Length = 4684 Score = 31.6 bits (70), Expect = 2.5 Identities = 37/156 (23%), Positives = 66/156 (42%) Frame = -2 Query: 703 EFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEK 524 E ++I A E + Q++E +++Q A +RQE+E + E Sbjct: 1849 EQELIRLRAETEQGEQQRQLLEEELARLQREAAAATQKRQELEAELAK-------VRAEM 1901 Query: 523 NEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSKTRMNIYLALMAILGLTI 344 + K+ + + +E+ K + + EA + RE+AEE+A + LA A + Sbjct: 1902 EVLLASKAKAEEESRSTSEKSKQRLEAEAGRFRELAEEAARLRA-----LAEEAKRQRQL 1956 Query: 343 ANAVFATPEVEWRKVAALGLIFIGLVAQVTYEQDIS 236 A A E +V A L IG ++ E +I+ Sbjct: 1957 AEEDAARQRAEAERVLAEKLAAIGEATRLKTEAEIA 1992
>CCD11_MOUSE (Q9D439) Coiled-coil domain-containing protein 11| Length = 399 Score = 31.6 bits (70), Expect = 2.5 Identities = 24/102 (23%), Positives = 52/102 (50%), Gaps = 1/102 (0%) Frame = -2 Query: 685 QNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFF 506 ++ +E + D M+ + +Q ++ A+ ++Q+ E R + + D++ + + E Sbjct: 182 ESMQREYREDLDLNMKLVGRALQDLQDEADKKKQKREEMGREQKIYNDYLMQRREEE--- 238 Query: 505 KSLGKVKKPQNNEEIK-VKAKIEAQKVREIAEESAGSKTRMN 383 K ++ + N ++ +KAK A+K RE+A + A K MN Sbjct: 239 ----KAQEKELNRLLEDIKAKKLAEKDRELALQRAARKQLMN 276
>POLG_POL2W (P23069) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat| protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein P2A); Core protein P2B; Core protein P2C; Core protein P3A; Genome Length = 2204 Score = 31.6 bits (70), Expect = 2.5 Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 5/65 (7%) Frame = -2 Query: 469 EEIKVKAKIEAQKVREIAEESAGSKTRM-----NIYLALMAILGLTIANAVFATPEVEWR 305 +E++ K K+E K R I S M N+Y A G+ +AV P++ W Sbjct: 1905 DELRSKTKVEQGKSRLIEASSLNDSVAMRMAFGNLYAAFHKNPGVVTGSAVGCDPDLFWS 1964 Query: 304 KVAAL 290 K+ L Sbjct: 1965 KIPVL 1969
>POLG_POL1S (P03301) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat| protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein P2A); Core protein P2B; Core protein P2C; Core protein P3A; Genome Length = 2208 Score = 31.6 bits (70), Expect = 2.5 Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 5/84 (5%) Frame = -2 Query: 469 EEIKVKAKIEAQKVREIAEESAGSKTRM-----NIYLALMAILGLTIANAVFATPEVEWR 305 +E++ K K+E K R I S M N+Y A G+ +AV P++ W Sbjct: 1907 DELRSKTKVEQGKSRLIEASSLNDSVAMRMAFGNLYAAFHKNPGVITGSAVGCDPDLFWS 1966 Query: 304 KVAALGLIFIGLVAQVTYEQDISP 233 K+ L + Y+ +SP Sbjct: 1967 KIPVLMEEKLFAFDYTGYDASLSP 1990
>POLG_POL1M (P03300) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat| protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein P2A); Core protein P2B; Core protein P2C; Core protein P3A; Genome Length = 2208 Score = 31.6 bits (70), Expect = 2.5 Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 5/84 (5%) Frame = -2 Query: 469 EEIKVKAKIEAQKVREIAEESAGSKTRM-----NIYLALMAILGLTIANAVFATPEVEWR 305 +E++ K K+E K R I S M N+Y A G+ +AV P++ W Sbjct: 1907 DELRSKTKVEQGKSRLIEASSLNDSVAMRMAFGNLYAAFHKNPGVITGSAVGCDPDLFWS 1966 Query: 304 KVAALGLIFIGLVAQVTYEQDISP 233 K+ L + Y+ +SP Sbjct: 1967 KIPVLMEEKLFAFDYTGYDASLSP 1990
>YSR4_CAEEL (Q09952) Hypothetical protein F59B10.4| Length = 267 Score = 31.2 bits (69), Expect = 3.3 Identities = 14/47 (29%), Positives = 26/47 (55%) Frame = -2 Query: 388 MNIYLALMAILGLTIANAVFATPEVEWRKVAALGLIFIGLVAQVTYE 248 +N L L+A+LG+ + P + W+ V L L+F+G ++ Y+ Sbjct: 76 VNFSLVLLALLGINSKVSSMILPALVWKCVLLLFLLFLGCISVDAYQ 122
>PCNT_HUMAN (O95613) Pericentrin (Pericentrin B) (Kendrin)| Length = 3336 Score = 31.2 bits (69), Expect = 3.3 Identities = 32/118 (27%), Positives = 52/118 (44%), Gaps = 4/118 (3%) Frame = -2 Query: 649 QIMERLDSKMQSYEETAEMQRQEIEMN----ERVLEDFEDWIEEEKNEGMFFKSLGKVKK 482 Q +E L ++Q EE AE+Q E+E N E +ED I+E F++ K K+ Sbjct: 1815 QALEALQQRLQGAEEAAELQLAELERNVALREAEVEDMASRIQE-------FEAALKAKE 1867 Query: 481 PQNNEEIKVKAKIEAQKVREIAEESAGSKTRMNIYLALMAILGLTIANAVFATPEVEW 308 E +I+A R+ A + + + A+ +A A A PE++W Sbjct: 1868 ATIAER---NLEIDALNQRKAAHSAELEAVLLALARIRRALEQQPLA-AGAAPPELQW 1921
>Y124_METJA (Q57588) Hypothetical protein MJ0124| Length = 1075 Score = 31.2 bits (69), Expect = 3.3 Identities = 16/85 (18%), Positives = 44/85 (51%), Gaps = 4/85 (4%) Frame = -2 Query: 664 DQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFE----DWIEEEKNEGMFFKSL 497 + IG + ++R + + + + +Q + + +LE E DWI + ++ ++ ++ Sbjct: 895 ENIGKREIKRAVANYYFILKNSILDKQHDPIYKEILERLERLRRDWIMKRIDDKIYLNAI 954 Query: 496 GKVKKPQNNEEIKVKAKIEAQKVRE 422 + + +NN + K+K K ++++E Sbjct: 955 KNLMELKNNYDKKIKGKSSIERIKE 979
>RPOC_XANOR (Q8KTH8) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1405 Score = 31.2 bits (69), Expect = 3.3 Identities = 13/49 (26%), Positives = 28/49 (57%) Frame = -2 Query: 538 IEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSKT 392 +E +K EGM F + +VK+ +N +++ AK++ + + + G +T Sbjct: 517 LENKKGEGMVFANTSEVKRAYDNRVVELHAKVKVRITQVDVDAVDGKRT 565
>RPOC_XANCP (Q8PC55) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1405 Score = 31.2 bits (69), Expect = 3.3 Identities = 13/49 (26%), Positives = 28/49 (57%) Frame = -2 Query: 538 IEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSKT 392 +E +K EGM F + +VK+ +N +++ AK++ + + + G +T Sbjct: 517 LENKKGEGMVFANTSEVKRAYDNRVVELHAKVKVRITQVDVDTVDGKRT 565
>RPOC_XANC8 (Q4URD3) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1405 Score = 31.2 bits (69), Expect = 3.3 Identities = 13/49 (26%), Positives = 28/49 (57%) Frame = -2 Query: 538 IEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSKT 392 +E +K EGM F + +VK+ +N +++ AK++ + + + G +T Sbjct: 517 LENKKGEGMVFANTSEVKRAYDNRVVELHAKVKVRITQVDVDTVDGKRT 565
>MYT1L_HUMAN (Q9UL68) Myelin transcription factor 1-like protein (MyT1L protein)| (MyT1-L) Length = 1186 Score = 31.2 bits (69), Expect = 3.3 Identities = 30/129 (23%), Positives = 56/129 (43%), Gaps = 18/129 (13%) Frame = -2 Query: 715 DADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQR------QEIEMNERVLE 554 D D + + G+ ++ D+ GD+ E + + EE E +++E E E Sbjct: 98 DMDEKEEDEGEEYSEDNDEPGDEDEEDEEGDREEEEEIEEEDEDDDEDGEDVEDEEEEEE 157 Query: 553 DFEDWIEEEKNEGMFF-----KSLGKVKKPQNN-------EEIKVKAKIEAQKVREIAEE 410 + E+ EEE+NE + + +K NN +E+ K+ + K+ E A Sbjct: 158 EEEEEEEEEENEDHQMNCHNTRIMQDTEKDDNNSDEYDNYDELVAKSLLNLGKIAEDAAY 217 Query: 409 SAGSKTRMN 383 A +++ MN Sbjct: 218 RARTESEMN 226
>LMO7_HUMAN (Q8WWI1) LIM domain only protein 7 (LOMP) (F-box only protein 20)| Length = 1683 Score = 31.2 bits (69), Expect = 3.3 Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 3/51 (5%) Frame = -2 Query: 673 KELDQIGDQIMERLDSKMQSYEETAEMQRQEI--EMNERV-LEDFEDWIEE 530 K LDQIG+ + SK + AE++RQ+I EM +R L + WI + Sbjct: 1439 KYLDQIGNMTSSQRRSKKEQVPSGAELERQQILQEMRKRTPLHNDNSWIRQ 1489
>IF2_AQUAE (O67825) Translation initiation factor IF-2| Length = 805 Score = 30.8 bits (68), Expect = 4.3 Identities = 20/80 (25%), Positives = 44/80 (55%), Gaps = 3/80 (3%) Frame = -2 Query: 643 MERLDSKMQSYEETAEMQRQEIEMNER---VLEDFEDWIEEEKNEGMFFKSLGKVKKPQN 473 +++ + K + EE E ++ +I+M+++ ++ E +E+EK + + + +K + Sbjct: 162 VKKEERKEEKKEEKKEEEKPKIKMSKKEREIMRKLEHAVEKEKKK----QEKREKEKKKK 217 Query: 472 NEEIKVKAKIEAQKVREIAE 413 EE+K+ E VRE+AE Sbjct: 218 EEEVKIIYIPEVITVRELAE 237 Score = 30.0 bits (66), Expect = 7.4 Identities = 19/88 (21%), Positives = 45/88 (51%), Gaps = 2/88 (2%) Frame = -2 Query: 652 DQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQN 473 +++++ + K + +E +++++ E RV+E ++ +EEK E + K+K + Sbjct: 129 EELIKEILEKKEKEKEKKKVEKERKEEKVRVVEVKKEERKEEKKEEKKEEEKPKIKMSKK 188 Query: 472 NEEI--KVKAKIEAQKVREIAEESAGSK 395 EI K++ +E +K ++ E K Sbjct: 189 EREIMRKLEHAVEKEKKKQEKREKEKKK 216
>CENPF_HUMAN (P49454) CENP-F kinetochore protein (Centromere protein F) (Mitosin)| (AH antigen) Length = 3210 Score = 30.8 bits (68), Expect = 4.3 Identities = 20/92 (21%), Positives = 41/92 (44%) Frame = -2 Query: 685 QNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFF 506 Q + ELD++ L+ K Q+ + E + +EM + L++ + + + Sbjct: 2319 QGQLSELDKLLSSFKSLLEEKEQAEIQIKEESKTAVEMLQNQLKELNEAVAALCGDQEIM 2378 Query: 505 KSLGKVKKPQNNEEIKVKAKIEAQKVREIAEE 410 K+ + P EE +++ IE + R A+E Sbjct: 2379 KATEQSLDPPIEEEHQLRNSIEKLRARLEADE 2410
>IF2_PSEHT (Q3IJ53) Translation initiation factor IF-2| Length = 886 Score = 30.8 bits (68), Expect = 4.3 Identities = 22/82 (26%), Positives = 44/82 (53%), Gaps = 1/82 (1%) Frame = -2 Query: 637 RLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIK 458 RL+ + ++ +E AE++ ++ E + ED + +EE + K K+ + K Sbjct: 118 RLEEQQKAAQEAAELKAKQ-EAERKAKEDADRKAKEEAKRKADAERKAKQKQMTPEQSAK 176 Query: 457 V-KAKIEAQKVREIAEESAGSK 395 K +IEA+++++ AEE+A K Sbjct: 177 SEKDRIEAERLQKEAEEAALKK 198
>ATPF_CLOAB (O05098) ATP synthase B chain (EC 3.6.3.14)| Length = 159 Score = 30.4 bits (67), Expect = 5.7 Identities = 22/71 (30%), Positives = 33/71 (46%) Frame = -2 Query: 625 KMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVKAK 446 K + E A + + E E N +E+ K +G KVK + +EEI +AK Sbjct: 47 KADAQNEEARLLKVESEKN----------LEDSKLQGKTIVENYKVKAEKVSEEITAEAK 96 Query: 445 IEAQKVREIAE 413 EAQ + E A+ Sbjct: 97 TEAQNILERAK 107
>DREB_HUMAN (Q16643) Drebrin (Developmentally-regulated brain protein)| Length = 648 Score = 30.4 bits (67), Expect = 5.7 Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 4/89 (4%) Frame = -2 Query: 634 LDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKV 455 LD +++ +E E +RQE E ER + E IEE + +K Q E + Sbjct: 199 LDERLRFEQERMEQERQEQEERERRYREREQQIEEHR------------RKQQTLEAEEA 246 Query: 454 KAKIEAQKV----REIAEESAGSKTRMNI 380 K +++ Q + R+ EE+ K+ + Sbjct: 247 KRRLKEQSIFGDHRDEEEETHMKKSESEV 275
>IE68_SHV21 (Q01042) Immediate-early protein| Length = 407 Score = 30.4 bits (67), Expect = 5.7 Identities = 20/67 (29%), Positives = 32/67 (47%) Frame = -2 Query: 610 EETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQK 431 EE E + +E E E E+ E+ EEE+ E + ++ EE + + EA++ Sbjct: 94 EEAEEEEAEEKEAEEEEAEEAEEEAEEEEAEEAEAEEEEAEEEEAEEEEAEEAEEEEAEE 153 Query: 430 VREIAEE 410 E AEE Sbjct: 154 AEEEAEE 160
>RPOD_HELPJ (Q9ZMY3) RNA polymerase sigma factor rpoD (Sigma-70)| Length = 681 Score = 30.4 bits (67), Expect = 5.7 Identities = 16/63 (25%), Positives = 34/63 (53%), Gaps = 2/63 (3%) Frame = -2 Query: 625 KMQSYEETAEMQRQEIEMNERVLE--DFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVK 452 K+++ EE ++ +E+E L+ DF +W + M+ + +G +K +EEI++ Sbjct: 133 KIKNTEEKQKVLDEELEDGYDFLKEKDFLEWSRSDSPVRMYLREMGDIKLLSKDEEIELS 192 Query: 451 AKI 443 +I Sbjct: 193 KQI 195
>RAD50_METMA (Q8PUY4) DNA double-strand break repair rad50 ATPase| Length = 1070 Score = 30.4 bits (67), Expect = 5.7 Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 4/76 (5%) Frame = -2 Query: 679 AMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFE----DWIEEEKNEGM 512 A+KE + GD + LDS+MQS + EIE E+ + D D+ E++ Sbjct: 438 ALKEKES-GDASLRELDSEMQSCRVAVSKGKSEIEALEKEIRDNSKAVLDFQEQKSEVFA 496 Query: 511 FFKSLGKVKKPQNNEE 464 K+LG ++ N E Sbjct: 497 GLKALGFTEEQLENLE 512
>IOVO_TADRA (P68157) Ovomucoid (Fragment)| Length = 54 Score = 30.4 bits (67), Expect = 5.7 Identities = 12/33 (36%), Positives = 16/33 (48%) Frame = -1 Query: 422 DCRGECGVKNSDEYLPCTHGDTRSYNRKCRLCN 324 DC G + EY+P D ++Y KC CN Sbjct: 5 DCSGYPKPACTMEYMPLCGSDNKTYGNKCNFCN 37
>IOVO_SARME (P68156) Ovomucoid (Fragment)| Length = 54 Score = 30.4 bits (67), Expect = 5.7 Identities = 12/33 (36%), Positives = 16/33 (48%) Frame = -1 Query: 422 DCRGECGVKNSDEYLPCTHGDTRSYNRKCRLCN 324 DC G + EY+P D ++Y KC CN Sbjct: 5 DCSGYPKPACTMEYMPLCGSDNKTYGNKCNFCN 37
>IOVO_NEOJU (P68155) Ovomucoid (Fragment)| Length = 54 Score = 30.4 bits (67), Expect = 5.7 Identities = 12/33 (36%), Positives = 16/33 (48%) Frame = -1 Query: 422 DCRGECGVKNSDEYLPCTHGDTRSYNRKCRLCN 324 DC G + EY+P D ++Y KC CN Sbjct: 5 DCSGYPKPACTMEYMPLCGSDNKTYGNKCNFCN 37
>IOVO_MERCU (P68154) Ovomucoid (Fragment)| Length = 54 Score = 30.4 bits (67), Expect = 5.7 Identities = 12/33 (36%), Positives = 16/33 (48%) Frame = -1 Query: 422 DCRGECGVKNSDEYLPCTHGDTRSYNRKCRLCN 324 DC G + EY+P D ++Y KC CN Sbjct: 5 DCSGYPKPACTMEYMPLCGSDNKTYGNKCNFCN 37
>IOVO_LOPSP (P68153) Ovomucoid (Fragment)| Length = 54 Score = 30.4 bits (67), Expect = 5.7 Identities = 12/33 (36%), Positives = 16/33 (48%) Frame = -1 Query: 422 DCRGECGVKNSDEYLPCTHGDTRSYNRKCRLCN 324 DC G + EY+P D ++Y KC CN Sbjct: 5 DCSGYPKPACTMEYMPLCGSDNKTYGNKCNFCN 37
>IOVO_DRONO (P05560) Ovomucoid (Fragment)| Length = 54 Score = 30.4 bits (67), Expect = 5.7 Identities = 10/21 (47%), Positives = 14/21 (66%) Frame = -1 Query: 386 EYLPCTHGDTRSYNRKCRLCN 324 EY+P D+++YN KC CN Sbjct: 17 EYMPLCGSDSKTYNNKCDFCN 37
>IOVO_CYACY (P68152) Ovomucoid (Fragment)| Length = 54 Score = 30.4 bits (67), Expect = 5.7 Identities = 12/33 (36%), Positives = 16/33 (48%) Frame = -1 Query: 422 DCRGECGVKNSDEYLPCTHGDTRSYNRKCRLCN 324 DC G + EY+P D ++Y KC CN Sbjct: 5 DCSGYPKPACTMEYMPLCGSDNKTYGNKCNFCN 37
>IOVO_COSCO (P05571) Ovomucoid (Fragment)| Length = 54 Score = 30.4 bits (67), Expect = 5.7 Identities = 12/33 (36%), Positives = 16/33 (48%) Frame = -1 Query: 422 DCRGECGVKNSDEYLPCTHGDTRSYNRKCRLCN 324 DC G + EY+P D ++Y KC CN Sbjct: 5 DCSGYPKPACTMEYMPLCGSDNKTYGNKCNFCN 37
>IOVO_CHLPI (P68151) Ovomucoid (Fragment)| Length = 54 Score = 30.4 bits (67), Expect = 5.7 Identities = 12/33 (36%), Positives = 16/33 (48%) Frame = -1 Query: 422 DCRGECGVKNSDEYLPCTHGDTRSYNRKCRLCN 324 DC G + EY+P D ++Y KC CN Sbjct: 5 DCSGYPKPACTMEYMPLCGSDNKTYGNKCNFCN 37
>IOVO_ANAPL (P68150) Ovomucoid (Fragment)| Length = 54 Score = 30.4 bits (67), Expect = 5.7 Identities = 12/33 (36%), Positives = 16/33 (48%) Frame = -1 Query: 422 DCRGECGVKNSDEYLPCTHGDTRSYNRKCRLCN 324 DC G + EY+P D ++Y KC CN Sbjct: 5 DCSGYPKPACTMEYMPLCGSDNKTYGNKCNFCN 37
>IOVO_ANACA (P68149) Ovomucoid (Fragment)| Length = 54 Score = 30.4 bits (67), Expect = 5.7 Identities = 12/33 (36%), Positives = 16/33 (48%) Frame = -1 Query: 422 DCRGECGVKNSDEYLPCTHGDTRSYNRKCRLCN 324 DC G + EY+P D ++Y KC CN Sbjct: 5 DCSGYPKPACTMEYMPLCGSDNKTYGNKCNFCN 37
>IOVO_ALOAE (P68148) Ovomucoid (Fragment)| Length = 54 Score = 30.4 bits (67), Expect = 5.7 Identities = 12/33 (36%), Positives = 16/33 (48%) Frame = -1 Query: 422 DCRGECGVKNSDEYLPCTHGDTRSYNRKCRLCN 324 DC G + EY+P D ++Y KC CN Sbjct: 5 DCSGYPKPACTMEYMPLCGSDNKTYGNKCNFCN 37
>IOVO_AIXSP (P68145) Ovomucoid (Fragment)| Length = 54 Score = 30.4 bits (67), Expect = 5.7 Identities = 12/33 (36%), Positives = 16/33 (48%) Frame = -1 Query: 422 DCRGECGVKNSDEYLPCTHGDTRSYNRKCRLCN 324 DC G + EY+P D ++Y KC CN Sbjct: 5 DCSGYPKPACTMEYMPLCGSDNKTYGNKCNFCN 37
>IOVO_AIXGA (P68144) Ovomucoid (Fragment)| Length = 54 Score = 30.4 bits (67), Expect = 5.7 Identities = 12/33 (36%), Positives = 16/33 (48%) Frame = -1 Query: 422 DCRGECGVKNSDEYLPCTHGDTRSYNRKCRLCN 324 DC G + EY+P D ++Y KC CN Sbjct: 5 DCSGYPKPACTMEYMPLCGSDNKTYGNKCNFCN 37
>CE290_BOVIN (Q9TU23) Centrosomal protein Cep290| Length = 1453 Score = 30.4 bits (67), Expect = 5.7 Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 1/78 (1%) Frame = -2 Query: 643 MERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEE 464 +E L+ + S +E E +E+E+ + L E E+E G ++ K KK N E Sbjct: 72 LEHLECENVSLKEQMESINKELEITKEKLHTIEQAWEQETKLGN-ESNMDKAKKSVTNSE 130 Query: 463 I-KVKAKIEAQKVREIAE 413 I + KI +++E+ E Sbjct: 131 IVSISKKITMLEMKELNE 148
>BFSP1_HUMAN (Q12934) Filensin (Beaded filament structural protein 1) (Lens| fiber cell beaded-filament structural protein CP 115) (CP115) (Lens intermediate filament-like heavy) (LIFL-H) Length = 665 Score = 30.4 bits (67), Expect = 5.7 Identities = 17/38 (44%), Positives = 21/38 (55%) Frame = -2 Query: 667 LDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLE 554 L+Q E D ++Q Y E E R+EIE ERVLE Sbjct: 249 LEQAIKSAHECYDDEIQLYNEQIETLRKEIEETERVLE 286
>CING_XENLA (Q9PTD7) Cingulin| Length = 1360 Score = 30.0 bits (66), Expect = 7.4 Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 2/86 (2%) Frame = -2 Query: 661 QIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLE--DFEDWIEEEKNEGMFFKSLGKV 488 Q+ D++ +R+ + A MQR EIE+ E E ++ E++KNE + S + Sbjct: 451 QLDDEMKQRMKLETSQGRPKAGMQRLEIELEESKEECSRLKELYEKKKNE-LSAMSQELM 509 Query: 487 KKPQNNEEIKVKAKIEAQKVREIAEE 410 + E+++ K + K+ + EE Sbjct: 510 EVRMGKEQVETKLRTMEDKLMDSKEE 535
>TCMO_SOYBN (Q42797) Trans-cinnamate 4-monooxygenase (EC 1.14.13.11) (Cinnamic| acid 4-hydroxylase) (CA4H) (C4H) (P450C4H) (Cytochrome P450 73) Length = 506 Score = 30.0 bits (66), Expect = 7.4 Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 2/59 (3%) Frame = -2 Query: 577 EMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIK--VKAKIEAQKVREIAEES 407 E+ E L+ F+D+ +E+ K LG K NN E+K + ++AQ+ EI E++ Sbjct: 244 EVKETRLKLFKDYFVDER------KKLGSTKSTNNNNELKCAIDHILDAQRKGEINEDN 296
>SMC3_RAT (P97690) Structural maintenance of chromosome 3 (Chondroitin| sulfate proteoglycan 6) (Chromosome segregation protein SmcD) (Bamacan) (Basement membrane-associated chondroitin proteoglycan) Length = 1191 Score = 30.0 bits (66), Expect = 7.4 Identities = 19/82 (23%), Positives = 39/82 (47%) Frame = -2 Query: 643 MERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEE 464 ++ L +K ++ E + R + +ED E + E K + K + + E+ Sbjct: 239 LDELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQ 298 Query: 463 IKVKAKIEAQKVREIAEESAGS 398 IK + K+E K +++ +E AG+ Sbjct: 299 IKQRTKLEL-KAKDLQDELAGN 319
>CASP8_MOUSE (O89110) Caspase-8 precursor (EC 3.4.22.-) (CASP-8) [Contains:| Caspase-8 subunit p18; Caspase-8 subunit p10] Length = 480 Score = 30.0 bits (66), Expect = 7.4 Identities = 13/45 (28%), Positives = 26/45 (57%) Frame = -2 Query: 694 MIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERV 560 M+ +N ++ L I DQ+ + L K++ YE ++ +R +E E + Sbjct: 151 MLAENNLETLKSICDQVNKSLLGKIEDYERSSTERRMSLEGREEL 195
>KCC4_RAT (P13234) Calcium/calmodulin-dependent protein kinase type IV (EC| 2.7.11.17) (CAM kinase-GR) (CaMK IV) (Calspermin) Length = 474 Score = 30.0 bits (66), Expect = 7.4 Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 9/97 (9%) Frame = -2 Query: 661 QIGDQIMERLDSKMQS---------YEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMF 509 Q G + L++KMQ+ +ET ++Q +E+E E V E+ E+ EEE+ M Sbjct: 359 QDGKDKTDPLENKMQAGDHEAAKAAADETMKLQSEEVEEEEGVKEEEEEEEEEEETSRMV 418 Query: 508 FKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGS 398 PQ E+ + + + Q+++ +EE+ S Sbjct: 419 ---------PQEPED---RLETDDQEMKRNSEETLKS 443
>FLOT2_CARAU (O42305) Flotillin-2 (Reggie-1) (REG-1)| Length = 428 Score = 30.0 bits (66), Expect = 7.4 Identities = 25/106 (23%), Positives = 55/106 (51%) Frame = -2 Query: 712 ADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIE 533 AD++ ++ Q A + + +L ++++ +E +++ +EIE+ E V + IE Sbjct: 213 ADSKRELELQKAAFNQEVNTKKAESQLAYELEAAKEQQKIRLEEIEI-EVVQRKKQISIE 271 Query: 532 EEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSK 395 E++ E + + VK+P E K++ E QK++++ A S+ Sbjct: 272 EKEIERTEKELIATVKRPAEAEAYKMQQLAEGQKLKKVLIAQAESE 317
>CE290_HUMAN (O15078) Centrosomal protein Cep290| Length = 1539 Score = 30.0 bits (66), Expect = 7.4 Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 1/78 (1%) Frame = -2 Query: 643 MERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEE 464 +E L+ + S +E E +E+E+ + L E E+E G S+ K KK N + Sbjct: 53 LEHLECENISLKEQVESINKELEITKEKLHTIEQAWEQETKLGN-ESSMDKAKKSITNSD 111 Query: 463 I-KVKAKIEAQKVREIAE 413 I + KI +++E+ E Sbjct: 112 IVSISKKITMLEMKELNE 129
>SMC3_PONPY (Q5R4K5) Structural maintenance of chromosome 3 (Chondroitin| sulfate proteoglycan 6) Length = 1217 Score = 30.0 bits (66), Expect = 7.4 Identities = 19/82 (23%), Positives = 39/82 (47%) Frame = -2 Query: 643 MERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEE 464 ++ L +K ++ E + R + +ED E + E K + K + + E+ Sbjct: 239 LDELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQ 298 Query: 463 IKVKAKIEAQKVREIAEESAGS 398 IK + K+E K +++ +E AG+ Sbjct: 299 IKQRTKLEL-KAKDLQDELAGN 319
>SMC3_MOUSE (Q9CW03) Structural maintenance of chromosome 3 (Chondroitin| sulfate proteoglycan 6) (Chromosome segregation protein SmcD) (Bamacan) (Basement membrane-associated chondroitin proteoglycan) (Mad member-interacting protein 1) Length = 1217 Score = 30.0 bits (66), Expect = 7.4 Identities = 19/82 (23%), Positives = 39/82 (47%) Frame = -2 Query: 643 MERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEE 464 ++ L +K ++ E + R + +ED E + E K + K + + E+ Sbjct: 239 LDELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQ 298 Query: 463 IKVKAKIEAQKVREIAEESAGS 398 IK + K+E K +++ +E AG+ Sbjct: 299 IKQRTKLEL-KAKDLQDELAGN 319
>SMC3_HUMAN (Q9UQE7) Structural maintenance of chromosome 3 (Chondroitin| sulfate proteoglycan 6) (Chromosome-associated polypeptide) (hCAP) (Bamacan) (Basement membrane-associated chondroitin proteoglycan) Length = 1217 Score = 30.0 bits (66), Expect = 7.4 Identities = 19/82 (23%), Positives = 39/82 (47%) Frame = -2 Query: 643 MERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEE 464 ++ L +K ++ E + R + +ED E + E K + K + + E+ Sbjct: 239 LDELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQ 298 Query: 463 IKVKAKIEAQKVREIAEESAGS 398 IK + K+E K +++ +E AG+ Sbjct: 299 IKQRTKLEL-KAKDLQDELAGN 319
>DOCK1_MOUSE (Q8BUR4) Dedicator of cytokinesis protein 1 (180 kDa protein| downstream of CRK) (DOCK180) (Fragments) Length = 1027 Score = 30.0 bits (66), Expect = 7.4 Identities = 20/75 (26%), Positives = 38/75 (50%) Frame = -2 Query: 700 FDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKN 521 F Q +KE Q+ +I+ D K + +EE + ++ E E + D+E E K Sbjct: 426 FQATTQGQLKE--QLYQEIIHYFD-KGKMWEEAIALGKELAEQYETEMFDYEQLSELLKK 482 Query: 520 EGMFFKSLGKVKKPQ 476 + F++++ KV +P+ Sbjct: 483 QAQFYENIVKVIRPK 497
>SMC3_BOVIN (O97594) Structural maintenance of chromosome 3 (Chondroitin| sulfate proteoglycan 6) Length = 1218 Score = 30.0 bits (66), Expect = 7.4 Identities = 19/82 (23%), Positives = 39/82 (47%) Frame = -2 Query: 643 MERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEE 464 ++ L +K ++ E + R + +ED E + E K + K + + E+ Sbjct: 239 LDELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQ 298 Query: 463 IKVKAKIEAQKVREIAEESAGS 398 IK + K+E K +++ +E AG+ Sbjct: 299 IKQRTKLEL-KAKDLQDELAGN 319
>PCSK5_BRACL (Q9NJ15) Proprotein convertase subtilisin/kexin type 5 precursor (EC| 3.4.21.-) (Proprotein convertase PC6-like) (aPC6) Length = 1696 Score = 30.0 bits (66), Expect = 7.4 Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 1/76 (1%) Frame = -1 Query: 482 TSKQ*GNQGEGQDRSTEGQRDCRGECGVKNSDEYLPCTHGDTRSYNRKC-RLCNTRGGME 306 TS + G G + + + C+ +C +D+ L C H DT Y+ C + C R E Sbjct: 860 TSCEDGEYGTEEGKCEDCNIICK-KCNGSQADQCLEC-HHDTNLYDTTCVQYCGNRRYPE 917 Query: 305 EGCCSGSNFHWPGCSG 258 G C + GC G Sbjct: 918 NGECHPCHPSCLGCIG 933
>TOP2M_CAEEL (P34534) Putative DNA topoisomerase II, mitochondrial precursor (EC| 5.99.1.3) Length = 1053 Score = 30.0 bits (66), Expect = 7.4 Identities = 28/118 (23%), Positives = 54/118 (45%) Frame = -2 Query: 700 FDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKN 521 FD G+ +KE I + E + + YE+ ++Q++E E +E+ ++IE N Sbjct: 898 FDRNGE--LKEFGNISEIAAEFFEVRRDLYEKRLKIQKEECEAKLIYVENQLNFIEMVTN 955 Query: 520 EGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSKTRMNIYLALMAILGLT 347 + +S+G+ +++ K + +V +A + SK YL M + LT Sbjct: 956 GTIEIRSMGR-------NQLEEKLQEMGFRVDPMATIAKNSKKANYGYLLEMPVSRLT 1006
>MYO3_CAEEL (P12844) Myosin-3 (Myosin heavy chain A) (MHC A)| Length = 1969 Score = 30.0 bits (66), Expect = 7.4 Identities = 31/142 (21%), Positives = 64/142 (45%), Gaps = 15/142 (10%) Frame = -2 Query: 676 MKELDQIGDQIMERL----DSKMQSYEETAEMQRQ--------EIEMNERVLEDFEDWIE 533 + +L+ + D+I+ R+ S+++SY AE++R+ ++ N R W Sbjct: 783 LAKLEDLRDEILSRIVTMFQSRIRSYLAKAEVRRRYEQQTGLLVVQRNVRAWCTLRTW-- 840 Query: 532 EEKNEGMFFKSLGKVK---KPQNNEEIKVKAKIEAQKVREIAEESAGSKTRMNIYLALMA 362 +FK GKVK K +E + ++ QK+ E + +++++ +A + Sbjct: 841 ------EWFKLFGKVKPMLKAGKEQEAMGELAVKIQKLEEAVQRGEIARSQLESQVADL- 893 Query: 361 ILGLTIANAVFATPEVEWRKVA 296 + NA+F + E E +A Sbjct: 894 ---VEEKNALFLSLETEKANLA 912
>RPOD_HELPY (P55993) RNA polymerase sigma factor rpoD (Sigma-70)| Length = 671 Score = 30.0 bits (66), Expect = 7.4 Identities = 16/63 (25%), Positives = 33/63 (52%), Gaps = 2/63 (3%) Frame = -2 Query: 625 KMQSYEETAEMQRQEIEMNERVLE--DFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVK 452 K++ EE ++ +E+E L+ DF +W + M+ + +G +K +EEI++ Sbjct: 123 KIKKTEEKQKVLDEELEDGYDFLKEKDFLEWSRSDSPVRMYLREMGDIKLLSKDEEIELS 182 Query: 451 AKI 443 +I Sbjct: 183 KQI 185
>ESSB_STAAW (Q7A1V2) Protein essB| Length = 444 Score = 30.0 bits (66), Expect = 7.4 Identities = 25/96 (26%), Positives = 46/96 (47%) Frame = -2 Query: 682 NAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFK 503 N + E+ GD ++ + + Y + + Q+I E+ ++D + EEEK + Sbjct: 360 NKLNEIKNNGDLSNDKRSEETKKYND----KLQDILDKEKQVKDEKAKSEEEKAKA---- 411 Query: 502 SLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSK 395 K +K + EE + K K +AQK +E +E+ K Sbjct: 412 ---KDEKLKQQEENEKKQKEQAQKDKEKRQEAERKK 444
>ESSB_STAAU (P0C053) Protein essB| Length = 444 Score = 30.0 bits (66), Expect = 7.4 Identities = 25/96 (26%), Positives = 46/96 (47%) Frame = -2 Query: 682 NAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFK 503 N + E+ GD ++ + + Y + + Q+I E+ ++D + EEEK + Sbjct: 360 NKLNEIKNNGDLSNDKRSEETKKYND----KLQDILDKEKQVKDEKAKSEEEKAKA---- 411 Query: 502 SLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSK 395 K +K + EE + K K +AQK +E +E+ K Sbjct: 412 ---KDEKLKQQEENEKKQKEQAQKDKEKRQEAERKK 444
>ESSB_STAAS (Q6GCI6) Protein essB| Length = 444 Score = 30.0 bits (66), Expect = 7.4 Identities = 25/96 (26%), Positives = 46/96 (47%) Frame = -2 Query: 682 NAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFK 503 N + E+ GD ++ + + Y + + Q+I E+ ++D + EEEK + Sbjct: 360 NKLNEIKNNGDLSNDKRSEETKKYND----KLQDILDKEKQVKDEKAKSEEEKAKA---- 411 Query: 502 SLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSK 395 K +K + EE + K K +AQK +E +E+ K Sbjct: 412 ---KDEKLKQQEENEKKQKEQAQKDKEKRQEAERKK 444
>ESSB_STAAR (Q6GK25) Protein essB| Length = 444 Score = 30.0 bits (66), Expect = 7.4 Identities = 25/96 (26%), Positives = 46/96 (47%) Frame = -2 Query: 682 NAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFK 503 N + E+ GD ++ + + Y + + Q+I E+ ++D + EEEK + Sbjct: 360 NKLNEIKNNGDLSNDKRSEETKKYND----KLQDILDKEKQVKDEKAKSEEEKAKA---- 411 Query: 502 SLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSK 395 K +K + EE + K K +AQK +E +E+ K Sbjct: 412 ---KDEKLKQQEENEKKQKEQAQKDKEKRQEAERKK 444
>ESSB_STAAN (Q7A7S0) Protein essB| Length = 444 Score = 30.0 bits (66), Expect = 7.4 Identities = 25/96 (26%), Positives = 46/96 (47%) Frame = -2 Query: 682 NAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFK 503 N + E+ GD ++ + + Y + + Q+I E+ ++D + EEEK + Sbjct: 360 NKLNEIKNNGDLSNDKRSEETKKYND----KLQDILDKEKQVKDEKAKSEEEKAKA---- 411 Query: 502 SLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSK 395 K +K + EE + K K +AQK +E +E+ K Sbjct: 412 ---KDEKLKQQEENEKKQKEQAQKDKEKRQEAERKK 444
>ESSB_STAAM (Q99WU0) Protein essB| Length = 444 Score = 30.0 bits (66), Expect = 7.4 Identities = 25/96 (26%), Positives = 46/96 (47%) Frame = -2 Query: 682 NAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFK 503 N + E+ GD ++ + + Y + + Q+I E+ ++D + EEEK + Sbjct: 360 NKLNEIKNNGDLSNDKRSEETKKYND----KLQDILDKEKQVKDEKAKSEEEKAKA---- 411 Query: 502 SLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSK 395 K +K + EE + K K +AQK +E +E+ K Sbjct: 412 ---KDEKLKQQEENEKKQKEQAQKDKEKRQEAERKK 444
>ESSB_STAAC (Q5HJ87) Protein essB| Length = 444 Score = 30.0 bits (66), Expect = 7.4 Identities = 25/96 (26%), Positives = 46/96 (47%) Frame = -2 Query: 682 NAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFK 503 N + E+ GD ++ + + Y + + Q+I E+ ++D + EEEK + Sbjct: 360 NKLNEIKNNGDLSNDKRSEETKKYND----KLQDILDKEKQVKDEKAKSEEEKAKA---- 411 Query: 502 SLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSK 395 K +K + EE + K K +AQK +E +E+ K Sbjct: 412 ---KDEKLKQQEENEKKQKEQAQKDKEKRQEAERKK 444
>IOVO_GALCH (P68379) Ovomucoid (Fragment)| Length = 54 Score = 30.0 bits (66), Expect = 7.4 Identities = 13/33 (39%), Positives = 17/33 (51%) Frame = -1 Query: 422 DCRGECGVKNSDEYLPCTHGDTRSYNRKCRLCN 324 DC G S EY+P D ++Y+ KC CN Sbjct: 5 DCSGYPQPACSLEYVPFCGSDNKTYSNKCDFCN 37
>IOVO_FULAT (P68378) Ovomucoid (Fragment)| Length = 54 Score = 30.0 bits (66), Expect = 7.4 Identities = 13/33 (39%), Positives = 17/33 (51%) Frame = -1 Query: 422 DCRGECGVKNSDEYLPCTHGDTRSYNRKCRLCN 324 DC G S EY+P D ++Y+ KC CN Sbjct: 5 DCSGYPQPACSLEYVPFCGSDNKTYSNKCDFCN 37
>TACC3_HUMAN (Q9Y6A5) Transforming acidic coiled-coil-containing protein 3| (ERIC-1) Length = 838 Score = 30.0 bits (66), Expect = 7.4 Identities = 29/109 (26%), Positives = 54/109 (49%), Gaps = 7/109 (6%) Frame = -2 Query: 685 QNAMKELDQIGDQI--MER----LDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEK 524 Q +KE DQ+ + ME+ L + + +E E R+ E ++ +ED+ I +E Sbjct: 702 QKVLKEKDQLTTDLNSMEKSFSDLFKRFEKQKEVIEGYRKNEESLKKCVEDYLARITQEG 761 Query: 523 NEGMFFKSLGKVKKPQNNEEI-KVKAKIEAQKVREIAEESAGSKTRMNI 380 K+ + K NEEI +V++K +A+ +A +++ K +M I Sbjct: 762 QRYQALKAHAEEKLQLANEEIAQVRSKAQAE---ALALQASLRKEQMRI 807
>ENGA_CHRVO (Q7NS92) GTP-binding protein engA| Length = 469 Score = 30.0 bits (66), Expect = 7.4 Identities = 24/68 (35%), Positives = 37/68 (54%) Frame = -2 Query: 577 EMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGS 398 E+ E VLE F D +EEE + F +G +P + V A + ++V IA + AG+ Sbjct: 154 ELMELVLEGFPDEVEEEDSRHPKFAVIG---RPNVGKSTLVNAILGEERV--IAFDQAGT 208 Query: 397 KTRMNIYL 374 TR +IY+ Sbjct: 209 -TRDSIYI 215
>DOCK1_HUMAN (Q14185) Dedicator of cytokinesis protein 1 (180 kDa protein| downstream of CRK) (DOCK180) Length = 1865 Score = 29.6 bits (65), Expect = 9.7 Identities = 19/70 (27%), Positives = 37/70 (52%) Frame = -2 Query: 685 QNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFF 506 Q +KE Q+ +I+ D K + +EE + ++ E E + D+E E K + F+ Sbjct: 1269 QGQLKE--QLYQEIIHYFD-KGKMWEEAIALGKELAEQYENEMFDYEQLSELLKKQAQFY 1325 Query: 505 KSLGKVKKPQ 476 +++ KV +P+ Sbjct: 1326 ENIVKVIRPK 1335
>MYS2_DICDI (P08799) Myosin-2 heavy chain, non muscle (Myosin II heavy chain, non| muscle) Length = 2116 Score = 29.6 bits (65), Expect = 9.7 Identities = 23/106 (21%), Positives = 52/106 (49%) Frame = -2 Query: 709 DTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEE 530 DT++ + + A K +IG +E +++S E + + + + +++ LE D + Sbjct: 1822 DTKYKLNDEAATKTQTEIGAAKLEDQIDELRSKLEQEQAKATQADKSKKTLEGEIDNLRA 1881 Query: 529 EKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSKT 392 + + GK+K E+ ++ ++E ++RE EE+ SK+ Sbjct: 1882 Q------IEDEGKIKMRLEKEKRALEGELE--ELRETVEEAEDSKS 1919
>SWC3_YEAST (P31376) SWR1-complex protein 3| Length = 625 Score = 29.6 bits (65), Expect = 9.7 Identities = 16/69 (23%), Positives = 35/69 (50%) Frame = -2 Query: 631 DSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVK 452 D Q +++ E++++E E+ + + + EE+ K + K +K Q +E K K Sbjct: 177 DKIEQKWQDEQELKKKEKELKRKNDAEAKRLRMEERKRQQMQKKIAKEQKLQLQKENKAK 236 Query: 451 AKIEAQKVR 425 K+E + ++ Sbjct: 237 QKLEQEALK 245
>PLEC1_RAT (P30427) Plectin-1 (PLTN) (PCN)| Length = 4687 Score = 29.6 bits (65), Expect = 9.7 Identities = 24/100 (24%), Positives = 46/100 (46%) Frame = -2 Query: 703 EFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEK 524 E ++I A E + Q++E +++Q A +RQE+E + E Sbjct: 1852 EQELIRLRAETEQGEHQRQLLEEELARLQHEATAATQKRQELEAELAK-------VRAEM 1904 Query: 523 NEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESA 404 + K+ + + +E+ K + + EA + RE+AEE+A Sbjct: 1905 EVLLASKARAEEESRSTSEKSKQRLEAEAGRFRELAEEAA 1944
>Y111_ENCCU (Q8STB5) Hypothetical protein ECU01_0110/ECU01_1500/ECU08_0040| Length = 592 Score = 29.6 bits (65), Expect = 9.7 Identities = 13/49 (26%), Positives = 28/49 (57%), Gaps = 5/49 (10%) Frame = -2 Query: 673 KELDQIGDQIMERLDSKMQSY-----EETAEMQRQEIEMNERVLEDFED 542 +++ + G+ ++ +DSKM+S EE E R ++ +++ +E F D Sbjct: 147 RQMARYGESLIREIDSKMESMPSEMSEEEKEKMRSDLNDDKKYVESFRD 195
>DDX23_HUMAN (Q9BUQ8) Probable ATP-dependent RNA helicase DDX23 (EC 3.6.1.-)| (DEAD box protein 23) (100 kDa U5 snRNP-specific protein) (U5-100kD) (PRP28 homolog) Length = 820 Score = 29.6 bits (65), Expect = 9.7 Identities = 28/125 (22%), Positives = 61/125 (48%), Gaps = 22/125 (17%) Frame = -2 Query: 715 DADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEET---------AEMQRQEIEMNER 563 D D++ D ++ K+L + +E L +K ++ EE AE + + ++ ++ Sbjct: 121 DRDSKKDEEDEHGDKKL-KAQPLSLEELLAKKKAEEEAEAKPKFLSKAEREAEALKRRQQ 179 Query: 562 VLEDFEDWIEEEKNEGMFFKSLGK--VKKPQNNEEIKVKAKIE-----------AQKVRE 422 +E+ + +EEE+ + F+ LG+ ++ PQ E + + ++E QK+RE Sbjct: 180 EVEERQRMLEEERKKRKQFQDLGRKMLEDPQERERRERRERMERETNGNEDEEGRQKIRE 239 Query: 421 IAEES 407 ++S Sbjct: 240 EKDKS 244
>CING_HUMAN (Q9P2M7) Cingulin| Length = 1197 Score = 29.6 bits (65), Expect = 9.7 Identities = 22/104 (21%), Positives = 54/104 (51%), Gaps = 11/104 (10%) Frame = -2 Query: 673 KELDQIGD---QIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFK 503 KEL++IG+ Q +++L ++++ Y+E A R+E+ +R +D+ E EK G + Sbjct: 850 KELEKIGEDSKQALQQLQAQLEDYKEKA---RREVADAQRQAKDWAS--EAEKTSGGLSR 904 Query: 502 SLGKVKK--------PQNNEEIKVKAKIEAQKVREIAEESAGSK 395 ++++ + ++ ++ AQ+++ + +E+ K Sbjct: 905 LQDEIQRLRQALQASQAERDTARLDKELLAQRLQGLEQEAENKK 948
>PLEC1_CRIGR (Q9JI55) Plectin-1 (PLTN) (PCN) (300-kDa intermediate| filament-associated protein) (IFAP300) (Fragment) Length = 4473 Score = 29.6 bits (65), Expect = 9.7 Identities = 24/100 (24%), Positives = 46/100 (46%) Frame = -2 Query: 703 EFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEK 524 E ++I A E + Q++E +++Q A +RQE+E + E Sbjct: 1638 EQELIRLRAETEQGEQQRQLLEEELARLQREATAATHKRQELEAELAK-------VRAEM 1690 Query: 523 NEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESA 404 + K+ + + +E+ K + + EA + RE+AEE+A Sbjct: 1691 EVLLASKARAEEESRSTSEKSKQRLEAEADRFRELAEEAA 1730
>IOVO_TINMA (P52254) Ovomucoid (Fragment)| Length = 51 Score = 29.6 bits (65), Expect = 9.7 Identities = 12/33 (36%), Positives = 16/33 (48%) Frame = -1 Query: 422 DCRGECGVKNSDEYLPCTHGDTRSYNRKCRLCN 324 DC G + EY P D ++Y+ KC CN Sbjct: 4 DCSGYPKPACTAEYFPLCGSDNQTYSNKCAFCN 36
>IOVO_CASCA (P62337) Ovomucoid (Fragment)| Length = 54 Score = 29.6 bits (65), Expect = 9.7 Identities = 10/23 (43%), Positives = 15/23 (65%) Frame = -1 Query: 392 SDEYLPCTHGDTRSYNRKCRLCN 324 S EY+P D+++YN KC C+ Sbjct: 15 SPEYMPLCGSDSKTYNNKCDFCS 37
>IOVO_CASBE (P62336) Ovomucoid (Fragment)| Length = 54 Score = 29.6 bits (65), Expect = 9.7 Identities = 10/23 (43%), Positives = 15/23 (65%) Frame = -1 Query: 392 SDEYLPCTHGDTRSYNRKCRLCN 324 S EY+P D+++YN KC C+ Sbjct: 15 SPEYMPLCGSDSKTYNNKCDFCS 37 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 93,343,273 Number of Sequences: 219361 Number of extensions: 1911402 Number of successful extensions: 7414 Number of sequences better than 10.0: 117 Number of HSP's better than 10.0 without gapping: 6915 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7398 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7309604013 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)