ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags30d06 |
|---|---|
| Clone Library Name | barley_pub |
>ALF_ORYSA (P17784) Fructose-bisphosphate aldolase cytoplasmic isozyme (EC| 4.1.2.13) (Gravity-specific protein GSC 233) Length = 358 Score = 82.0 bits (201), Expect = 9e-16 Identities = 39/42 (92%), Positives = 39/42 (92%) Frame = -3 Query: 518 KARKAFLVRCKANSEATLGTYKGDATLGEGASESLHVKDYKY 393 KAR AFL RCKANSEATLGTYKGDA LGEGASESLHVKDYKY Sbjct: 317 KARAAFLTRCKANSEATLGTYKGDAVLGEGASESLHVKDYKY 358
>ALF_CICAR (O65735) Fructose-bisphosphate aldolase, cytoplasmic isozyme (EC| 4.1.2.13) Length = 359 Score = 69.3 bits (168), Expect = 6e-12 Identities = 33/41 (80%), Positives = 36/41 (87%) Frame = -3 Query: 515 ARKAFLVRCKANSEATLGTYKGDATLGEGASESLHVKDYKY 393 A+ A L R KANSEATLGTYKG++ LGEGASESLHVKDYKY Sbjct: 319 AQDALLTRAKANSEATLGTYKGNSQLGEGASESLHVKDYKY 359
>ALF2_PEA (P46257) Fructose-bisphosphate aldolase, cytoplasmic isozyme 2 (EC| 4.1.2.13) Length = 359 Score = 66.2 bits (160), Expect = 5e-11 Identities = 32/41 (78%), Positives = 34/41 (82%) Frame = -3 Query: 515 ARKAFLVRCKANSEATLGTYKGDATLGEGASESLHVKDYKY 393 A+ A L R KANSEATLGTYKG + LG GASESLHVKDYKY Sbjct: 319 AQDALLTRAKANSEATLGTYKGASNLGAGASESLHVKDYKY 359
>ALF_MAIZE (P08440) Fructose-bisphosphate aldolase, cytoplasmic isozyme (EC| 4.1.2.13) Length = 355 Score = 65.1 bits (157), Expect = 1e-10 Identities = 33/42 (78%), Positives = 34/42 (80%) Frame = -3 Query: 518 KARKAFLVRCKANSEATLGTYKGDATLGEGASESLHVKDYKY 393 KAR AFL RCKANSEATLGTYKGDA +ESLHVKDYKY Sbjct: 317 KARAAFLARCKANSEATLGTYKGDAA---ADTESLHVKDYKY 355
>ALF1_PEA (P46256) Fructose-bisphosphate aldolase, cytoplasmic isozyme 1 (EC| 4.1.2.13) Length = 357 Score = 57.4 bits (137), Expect = 2e-08 Identities = 30/42 (71%), Positives = 32/42 (76%) Frame = -3 Query: 518 KARKAFLVRCKANSEATLGTYKGDATLGEGASESLHVKDYKY 393 KA+ FL RCKANSEATLG Y G + G ASESLHVKDYKY Sbjct: 317 KAQDVFLARCKANSEATLGKYGGGSGTGL-ASESLHVKDYKY 357
>ALF_SPIOL (P29356) Fructose-bisphosphate aldolase, cytoplasmic isozyme (EC| 4.1.2.13) Length = 357 Score = 56.2 bits (134), Expect = 5e-08 Identities = 29/42 (69%), Positives = 32/42 (76%) Frame = -3 Query: 518 KARKAFLVRCKANSEATLGTYKGDATLGEGASESLHVKDYKY 393 KA++ FL R K NSEATLG Y+G A G ASESLHVKDYKY Sbjct: 317 KAQEVFLARAKGNSEATLGKYQGGAG-GADASESLHVKDYKY 357
>ALF_ARATH (P22197) Fructose-bisphosphate aldolase, cytoplasmic isozyme (EC| 4.1.2.13) Length = 358 Score = 43.1 bits (100), Expect = 5e-04 Identities = 22/42 (52%), Positives = 27/42 (64%) Frame = -3 Query: 518 KARKAFLVRCKANSEATLGTYKGDATLGEGASESLHVKDYKY 393 KA+ FL RCKAN +ATLG Y G A+ A E+L V Y+Y Sbjct: 317 KAQAKFLTRCKANKDATLGKYTGWASGDSAAFENLVVIGYRY 358
>ALF_PLAFA (P14223) Fructose-bisphosphate aldolase (EC 4.1.2.13) (41 kDa| antigen) Length = 369 Score = 40.0 bits (92), Expect = 0.004 Identities = 23/42 (54%), Positives = 26/42 (61%) Frame = -3 Query: 518 KARKAFLVRCKANSEATLGTYKGDATLGEGASESLHVKDYKY 393 KAR+ L R +ANS AT G YKG A GE A SL+ K Y Y Sbjct: 329 KAREVLLQRAEANSLATYGKYKGGAG-GENAGASLYEKKYVY 369
>ALF_PLAF7 (Q7KQL9) Fructose-bisphosphate aldolase (EC 4.1.2.13)| Length = 369 Score = 40.0 bits (92), Expect = 0.004 Identities = 23/42 (54%), Positives = 26/42 (61%) Frame = -3 Query: 518 KARKAFLVRCKANSEATLGTYKGDATLGEGASESLHVKDYKY 393 KAR+ L R +ANS AT G YKG A GE A SL+ K Y Y Sbjct: 329 KAREVLLQRAEANSLATYGKYKGGAG-GENAGASLYEKKYVY 369
>ALF2_PLABA (P49577) Fructose-bisphosphate aldolase 2 (EC 4.1.2.13) (ALDO-2)| Length = 358 Score = 37.7 bits (86), Expect = 0.019 Identities = 22/42 (52%), Positives = 25/42 (59%) Frame = -3 Query: 518 KARKAFLVRCKANSEATLGTYKGDATLGEGASESLHVKDYKY 393 KAR+ L R +ANS AT G YKG A G A SL+ K Y Y Sbjct: 318 KARRVLLQRAEANSLATYGKYKGGAG-GSTAGASLYEKKYVY 358
>ALFC_ORYSA (Q40677) Fructose-bisphosphate aldolase, chloroplast precursor (EC| 4.1.2.13) (ALDP) Length = 388 Score = 35.8 bits (81), Expect = 0.072 Identities = 20/41 (48%), Positives = 24/41 (58%) Frame = -3 Query: 515 ARKAFLVRCKANSEATLGTYKGDATLGEGASESLHVKDYKY 393 A+ A L+R KANS A LG Y D E A E + VK+Y Y Sbjct: 349 AQDALLLRAKANSLAQLGKYTSDGEAAE-AKEGMFVKNYVY 388
>ALF1_CAEEL (P54216) Fructose-bisphosphate aldolase 1 (EC 4.1.2.13) (Aldolase| CE-1) (CE1) Length = 366 Score = 35.8 bits (81), Expect = 0.072 Identities = 17/41 (41%), Positives = 26/41 (63%) Frame = -3 Query: 515 ARKAFLVRCKANSEATLGTYKGDATLGEGASESLHVKDYKY 393 A++ L R + NS A++G Y GDA+ AS+SL V ++ Y Sbjct: 326 AQEVLLHRAQVNSLASVGKYTGDASADAAASQSLFVANHSY 366
>ALFC_PEA (Q01516) Fructose-bisphosphate aldolase 1, chloroplast precursor| (EC 4.1.2.13) (Fragment) Length = 356 Score = 35.4 bits (80), Expect = 0.095 Identities = 20/41 (48%), Positives = 24/41 (58%) Frame = -3 Query: 515 ARKAFLVRCKANSEATLGTYKGDATLGEGASESLHVKDYKY 393 A++A L R K+NS A LG Y GD E A + L VK Y Y Sbjct: 317 AQEALLFRAKSNSLAQLGKYYGDGE-SEEAKKELFVKGYSY 356
>HUTG_FUSNN (Q8RFN0) Formimidoylglutamase (EC 3.5.3.8) (Formiminoglutamase)| (Formiminoglutamate hydrolase) Length = 318 Score = 35.0 bits (79), Expect = 0.12 Identities = 22/84 (26%), Positives = 44/84 (52%) Frame = +1 Query: 169 IEQNLLLQFTICGTTWHSTPKTGYSTPKTNYLWYFESTGSILGSISKGYIRTLKNQTIIL 348 +E+N + TIC +H T G S P+T +W ++ G +L +I+K T KN T+ + Sbjct: 230 LERNDYIHLTICTDVFHITCAPGVSAPQTFGIWPNQAIG-LLNTIAK----TKKNLTLEV 284 Query: 349 VSRTPKRAIPPKAGQYL*SLTWRL 420 +P+ + + + +L +++ Sbjct: 285 AEISPRYDYDDRTSRLIANLIYQV 308
>ALF2_CAEEL (P46563) Fructose-bisphosphate aldolase 2 (EC 4.1.2.13) (Aldolase| CE-2) (CE2) Length = 366 Score = 35.0 bits (79), Expect = 0.12 Identities = 19/41 (46%), Positives = 25/41 (60%) Frame = -3 Query: 515 ARKAFLVRCKANSEATLGTYKGDATLGEGASESLHVKDYKY 393 A+K L R KAN +A+LG Y G+ G A+ESL V + Y Sbjct: 327 AQKTLLHRSKANGDASLGKYAGEDAAG-AAAESLFVAKHSY 366
>ALDOA_PONPY (Q5NVR5) Fructose-bisphosphate aldolase A (EC 4.1.2.13)| (Muscle-type aldolase) Length = 363 Score = 30.4 bits (67), Expect = 3.0 Identities = 16/41 (39%), Positives = 22/41 (53%) Frame = -3 Query: 515 ARKAFLVRCKANSEATLGTYKGDATLGEGASESLHVKDYKY 393 A++ ++ R ANS A G Y G ASESL V ++ Y Sbjct: 323 AQEEYVKRALANSLACQGKYTPSGQAGAAASESLFVSNHAY 363
>ALDOA_HUMAN (P04075) Fructose-bisphosphate aldolase A (EC 4.1.2.13)| (Muscle-type aldolase) (Lung cancer antigen NY-LU-1) Length = 363 Score = 30.4 bits (67), Expect = 3.0 Identities = 16/41 (39%), Positives = 22/41 (53%) Frame = -3 Query: 515 ARKAFLVRCKANSEATLGTYKGDATLGEGASESLHVKDYKY 393 A++ ++ R ANS A G Y G ASESL V ++ Y Sbjct: 323 AQEEYVKRALANSLACQGKYTPSGQAGAAASESLFVSNHAY 363
>ALDOB_MOUSE (Q91Y97) Fructose-bisphosphate aldolase B (EC 4.1.2.13) (Liver-type| aldolase) (Aldolase 2) Length = 363 Score = 30.0 bits (66), Expect = 4.0 Identities = 14/40 (35%), Positives = 21/40 (52%) Frame = -3 Query: 512 RKAFLVRCKANSEATLGTYKGDATLGEGASESLHVKDYKY 393 ++AF+ R AN +A G Y + G A++SL Y Y Sbjct: 324 QEAFMKRAMANCQAAQGQYVHTGSSGAAATQSLFTASYTY 363
>ALDOA_RAT (P05065) Fructose-bisphosphate aldolase A (EC 4.1.2.13)| (Muscle-type aldolase) Length = 363 Score = 30.0 bits (66), Expect = 4.0 Identities = 15/41 (36%), Positives = 22/41 (53%) Frame = -3 Query: 515 ARKAFLVRCKANSEATLGTYKGDATLGEGASESLHVKDYKY 393 A++ ++ R ANS A G Y G ASESL + ++ Y Sbjct: 323 AQEEYIKRALANSLACQGKYTPSGQSGAAASESLFISNHAY 363
>ALDOA_RABIT (P00883) Fructose-bisphosphate aldolase A (EC 4.1.2.13)| (Muscle-type aldolase) Length = 363 Score = 30.0 bits (66), Expect = 4.0 Identities = 15/41 (36%), Positives = 22/41 (53%) Frame = -3 Query: 515 ARKAFLVRCKANSEATLGTYKGDATLGEGASESLHVKDYKY 393 A++ ++ R ANS A G Y G ASESL + ++ Y Sbjct: 323 AQEEYVKRALANSLACQGKYTPSGQAGAAASESLFISNHAY 363
>ALDOA_MOUSE (P05064) Fructose-bisphosphate aldolase A (EC 4.1.2.13)| (Muscle-type aldolase) (Aldolase 1) Length = 363 Score = 30.0 bits (66), Expect = 4.0 Identities = 15/41 (36%), Positives = 22/41 (53%) Frame = -3 Query: 515 ARKAFLVRCKANSEATLGTYKGDATLGEGASESLHVKDYKY 393 A++ ++ R ANS A G Y G ASESL + ++ Y Sbjct: 323 AQEEYIKRALANSLACQGKYTPSGQSGAAASESLFISNHAY 363
>O5AK2_HUMAN (Q8NH90) Olfactory receptor 5AK2| Length = 309 Score = 29.6 bits (65), Expect = 5.2 Identities = 17/66 (25%), Positives = 28/66 (42%) Frame = -2 Query: 354 AYQYYRLVFQSPDISFGYRT*YGTCALKIP*VVCFWGRISCFWS*MPSGTAYRKLEQQVL 175 +Y Y S G + + TCA + V F+G +S + S + ++ + Sbjct: 217 SYIYIMATILKMSSSAGRKKSFSTCASHLTAVTIFYGTLSYMYLQSHSNNSQENMKVAFI 276 Query: 174 FYGPVI 157 FYG VI Sbjct: 277 FYGTVI 282
>ALDOB_SPAAU (P53447) Fructose-bisphosphate aldolase B (EC 4.1.2.13) (Liver-type| aldolase) Length = 363 Score = 29.3 bits (64), Expect = 6.8 Identities = 12/40 (30%), Positives = 21/40 (52%) Frame = -3 Query: 512 RKAFLVRCKANSEATLGTYKGDATLGEGASESLHVKDYKY 393 ++ F+ R K N A+ G YK + + + +SL+ Y Y Sbjct: 324 QQVFVTRAKINGLASKGEYKPSGSADQASQQSLYTASYVY 363
>O5AK3_HUMAN (Q8NH89) Olfactory receptor 5AK3| Length = 298 Score = 28.9 bits (63), Expect = 8.9 Identities = 16/66 (24%), Positives = 29/66 (43%) Frame = -2 Query: 354 AYQYYRLVFQSPDISFGYRT*YGTCALKIP*VVCFWGRISCFWS*MPSGTAYRKLEQQVL 175 +Y Y + + G + + TCA + V F+G +S + S + ++ + Sbjct: 217 SYIYIMVTILKMSSTAGRKKSFSTCASHLTAVTIFYGTLSYMYLQPQSNNSQENMKVASI 276 Query: 174 FYGPVI 157 FYG VI Sbjct: 277 FYGTVI 282
>MURI_BACSH (P52972) Glutamate racemase (EC 5.1.1.3)| Length = 265 Score = 28.9 bits (63), Expect = 8.9 Identities = 12/44 (27%), Positives = 26/44 (59%) Frame = +1 Query: 298 SISKGYIRTLKNQTIILVSRTPKRAIPPKAGQYL*SLTWRLSEA 429 +++K I+ L N+TI + T + P+ Q + + TW++++A Sbjct: 16 TVAKEIIKRLPNETIYYIGDTARCPYGPRTRQEVRNFTWQMAKA 59 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 76,671,869 Number of Sequences: 219361 Number of extensions: 1635821 Number of successful extensions: 3972 Number of sequences better than 10.0: 25 Number of HSP's better than 10.0 without gapping: 3884 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3968 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3927707336 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
