ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags30d05 |
|---|---|
| Clone Library Name | barley_pub |
>CIPK1_ORYSA (Q6X4A2) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1)| Length = 449 Score = 132 bits (333), Expect = 7e-31 Identities = 61/97 (62%), Positives = 81/97 (83%) Frame = -1 Query: 633 KRETSFASQRTPQEIMSKIEEACGPLGFNVRKQNYKMKLKGDKTGRKGHLSVATEVFEVA 454 KRET F SQ P+EI++KIEEA PLGF+++K+NYKM+++ K GRKG+L+VATEVF+VA Sbjct: 343 KRETRFTSQCPPKEIITKIEEAAKPLGFDIQKKNYKMRMENLKAGRKGNLNVATEVFQVA 402 Query: 453 PSLHMVELRKTGGDTLEFHSFYQNFSSELKDIVWKTE 343 PSLH+VEL+K GDTLEF FY+ S++LKD+VWK + Sbjct: 403 PSLHVVELKKAKGDTLEFQKFYRTLSTQLKDVVWKCD 439
>CPK24_ARATH (Q9LDI3) CBL-interacting serine/threonine-protein kinase 24 (EC| 2.7.11.1) (SNF1-related kinase 3.11) (SALT OVERLY SENSITIVE 2 protein) Length = 446 Score = 98.2 bits (243), Expect = 2e-20 Identities = 43/96 (44%), Positives = 67/96 (69%) Frame = -1 Query: 636 VKRETSFASQRTPQEIMSKIEEACGPLGFNVRKQNYKMKLKGDKTGRKGHLSVATEVFEV 457 VKR+T F S+R P EI++ IE +GF +N+K +L+G + + G L+V E++EV Sbjct: 335 VKRQTRFVSRREPSEIIANIEAVANSMGFKSHTRNFKTRLEGLSSIKAGQLAVVIEIYEV 394 Query: 456 APSLHMVELRKTGGDTLEFHSFYQNFSSELKDIVWK 349 APSL MV++RK G+TLE+H FY+ S+L++I+W+ Sbjct: 395 APSLFMVDVRKAAGETLEYHKFYKKLCSKLENIIWR 430
>CIPK1_ARATH (Q8RWC9) CBL-interacting serine/threonine-protein kinase 1 (EC| 2.7.11.1) (SOS2-like protein kinase PKS13) (SNF1-related kinase 3.16) Length = 444 Score = 69.7 bits (169), Expect = 7e-12 Identities = 36/94 (38%), Positives = 61/94 (64%), Gaps = 2/94 (2%) Frame = -1 Query: 633 KRETSFASQRTPQEIMSKIEEACGPLGFNVRKQNYKMKLKGDKTGRKGH--LSVATEVFE 460 +R F S + ++++ KIE A +GF+V+K++ K+++K ++ +KG LSV EVFE Sbjct: 343 ERRIRFTSNSSAKDLLEKIETAVTEMGFSVQKKHAKLRVKQEERNQKGQVGLSVTAEVFE 402 Query: 459 VAPSLHMVELRKTGGDTLEFHSFYQNFSSELKDI 358 + PSL++VELRK+ GD+ + Y+ LKD+ Sbjct: 403 IKPSLNVVELRKSYGDSCLYRQLYERL---LKDV 433
>CPK15_ARATH (P92937) CBL-interacting serine/threonine-protein kinase 15 (EC| 2.7.11.1) (Serine/threonine-protein kinase ATPK10) (SOS2-like protein kinase PKS3) (SOS-interacting protein 2) (SNF1-related kinase 3.1) Length = 421 Score = 56.6 bits (135), Expect = 6e-08 Identities = 33/81 (40%), Positives = 43/81 (53%) Frame = -1 Query: 642 GMVKRETSFASQRTPQEIMSKIEEACGPLGFNVRKQNYKMKLKGDKTGRKGHLSVATEVF 463 G K E F S R EI K+ E L VRK+ ++ ++K V EVF Sbjct: 325 GEEKEEMRFTSNREASEITEKLVEIGKDLKMKVRKKEHEWRVKMSAEATV----VEAEVF 380 Query: 462 EVAPSLHMVELRKTGGDTLEF 400 E+APS HMV L+K+GGDT E+ Sbjct: 381 EIAPSYHMVVLKKSGGDTAEY 401
>CHK1_HUMAN (O14757) Serine/threonine-protein kinase Chk1 (EC 2.7.11.1)| Length = 476 Score = 34.7 bits (78), Expect = 0.25 Identities = 24/95 (25%), Positives = 40/95 (42%) Frame = -1 Query: 639 MVKRETSFASQRTPQEIMSKIEEACGPLGFNVRKQNYKMKLKGDKTGRKGHLSVATEVFE 460 +VKR T F ++ + ++E C LG+ +K R L + E Sbjct: 373 LVKRMTRFFTKLDADKSYQCLKETCEKLGYQWKKSCMNQVTISTTDRRNNKLIFKVNLLE 432 Query: 459 VAPSLHMVELRKTGGDTLEFHSFYQNFSSELKDIV 355 + + +V+ R + GD LEF + +L DIV Sbjct: 433 MDDKI-LVDFRLSKGDGLEFKRHFLKIKGKLIDIV 466
>KR109_HUMAN (P60411) Keratin-associated protein 10-9 (Keratin-associated| protein 10.9) (High sulfur keratin-associated protein 10.9) (Keratin-associated protein 18-9) (Keratin-associated protein 18.9) Length = 292 Score = 33.1 bits (74), Expect = 0.73 Identities = 25/92 (27%), Positives = 35/92 (38%), Gaps = 2/92 (2%) Frame = -3 Query: 280 CCTGGPPLQLIPLGAGYCIFLRHRIDGPVRRLLSKTAPFFFTERDCTLTCTTRPSQTSSL 101 CC P L L+ R+ P ++ + +P + CT +CT Q SS Sbjct: 36 CCAPAPCLTLVCTPVS-------RVSSPCCQVTCEPSP---CQSGCTSSCTPSCCQQSSC 85 Query: 100 *--YCNGVPNRHPECALVCTRVVCLSVFCMEA 11 YC P + C VC + VC C A Sbjct: 86 QPAYCTSSPCQQACCVPVCCKPVCCVPVCCGA 117
>KR10C_HUMAN (P60413) Keratin-associated protein 10-12 (Keratin-associated| protein 10.12) (High sulfur keratin-associated protein 10.12) (Keratin-associated protein 18-12) (Keratin-associated protein 18.12) Length = 245 Score = 32.7 bits (73), Expect = 0.95 Identities = 24/89 (26%), Positives = 33/89 (37%), Gaps = 2/89 (2%) Frame = -3 Query: 280 CCTGGPPLQLIPLGAGYCIFLRHRIDGPVRRLLSKTAPFFFTERDCTLTCTTRPSQTSSL 101 CC P L L+ R+ P R+ + +P + CT +CT Q SS Sbjct: 41 CCAPAPCLSLVCTPVS-------RVSSPCCRVTCEPSP---CQSGCTSSCTPSCCQQSSC 90 Query: 100 *--YCNGVPNRHPECALVCTRVVCLSVFC 20 C P + C VC + VC C Sbjct: 91 QPACCTSSPCQQACCVPVCCKTVCCKPVC 119
>KR106_HUMAN (P60371) Keratin-associated protein 10-6 (Keratin-associated| protein 10.6) (High sulfur keratin-associated protein 10.6) (Keratin-associated protein 18-6) (Keratin-associated protein 18.6) Length = 365 Score = 31.2 bits (69), Expect = 2.8 Identities = 24/89 (26%), Positives = 33/89 (37%), Gaps = 2/89 (2%) Frame = -3 Query: 280 CCTGGPPLQLIPLGAGYCIFLRHRIDGPVRRLLSKTAPFFFTERDCTLTCTTRPSQTSS- 104 CC P L L+ R+ P + + +P + CT +CT Q SS Sbjct: 46 CCAPAPCLSLVCTPVS-------RVSSPCCPVTCEPSP---CQSGCTSSCTPSCCQQSSC 95 Query: 103 -L*YCNGVPNRHPECALVCTRVVCLSVFC 20 L C P + C VC + VC C Sbjct: 96 QLACCASSPCQQACCVPVCCKTVCCKPVC 124
>KR104_HUMAN (P60372) Keratin-associated protein 10-4 (Keratin-associated| protein 10.4) (High sulfur keratin-associated protein 10.4) (Keratin-associated protein 18-4) (Keratin-associated protein 18.4) Length = 401 Score = 31.2 bits (69), Expect = 2.8 Identities = 24/89 (26%), Positives = 33/89 (37%), Gaps = 2/89 (2%) Frame = -3 Query: 280 CCTGGPPLQLIPLGAGYCIFLRHRIDGPVRRLLSKTAPFFFTERDCTLTCTTRPSQTSS- 104 CC P L L+ R+ P + + +P + CT +CT Q SS Sbjct: 46 CCAPAPCLSLVCTPVS-------RVSSPCCPVTCEPSP---CQSGCTSSCTPSCCQQSSC 95 Query: 103 -L*YCNGVPNRHPECALVCTRVVCLSVFC 20 L C P + C VC + VC C Sbjct: 96 QLACCASSPCQQACCVPVCCKTVCCKPVC 124
>CHK1_RAT (Q91ZN7) Serine/threonine-protein kinase Chk1 (EC 2.7.11.1)| Length = 476 Score = 31.2 bits (69), Expect = 2.8 Identities = 23/95 (24%), Positives = 39/95 (41%) Frame = -1 Query: 639 MVKRETSFASQRTPQEIMSKIEEACGPLGFNVRKQNYKMKLKGDKTGRKGHLSVATEVFE 460 +VKR T F ++ + ++E LG+ +K R L + E Sbjct: 373 LVKRMTRFFTKLDADKSYQCLKETFEKLGYQWKKSCMNQVTVSTMDRRNNKLIFKINLVE 432 Query: 459 VAPSLHMVELRKTGGDTLEFHSFYQNFSSELKDIV 355 + + +V+ R + GD LEF + +L DIV Sbjct: 433 MDEKI-LVDFRLSKGDGLEFKRHFLKIKGKLSDIV 466
>SMC2_YEAST (P38989) Structural maintenance of chromosome 2 (DA-box protein| SMC2) Length = 1170 Score = 30.8 bits (68), Expect = 3.6 Identities = 23/69 (33%), Positives = 35/69 (50%) Frame = -1 Query: 600 PQEIMSKIEEACGPLGFNVRKQNYKMKLKGDKTGRKGHLSVATEVFEVAPSLHMVELRKT 421 P EI+S IEEA G F R++ + + +T + + ++ TE E+ P L +LR Sbjct: 158 PSEILSLIEEAAGTKMFEDRREKAERTMSKKETKLQENRTLLTE--EIEPKLE--KLRNE 213 Query: 420 GGDTLEFHS 394 LEF S Sbjct: 214 KRMFLEFQS 222
>CHK1_MOUSE (O35280) Serine/threonine-protein kinase Chk1 (EC 2.7.11.1)| Length = 476 Score = 30.8 bits (68), Expect = 3.6 Identities = 22/95 (23%), Positives = 39/95 (41%) Frame = -1 Query: 639 MVKRETSFASQRTPQEIMSKIEEACGPLGFNVRKQNYKMKLKGDKTGRKGHLSVATEVFE 460 +VKR T F ++ + ++E LG+ +K R L + E Sbjct: 373 LVKRMTRFFTKLDADKSYQCLKETFEKLGYQWKKSCMNQVTVSTTDRRNNKLIFKINLVE 432 Query: 459 VAPSLHMVELRKTGGDTLEFHSFYQNFSSELKDIV 355 + + +V+ R + GD LEF + +L D+V Sbjct: 433 MDEKI-LVDFRLSKGDGLEFKRHFLKIKGKLSDVV 466
>PAR4_RAT (Q920E0) Proteinase-activated receptor 4 precursor (PAR-4)| (Thrombin receptor-like 3) (Coagulation factor II receptor-like 3) Length = 395 Score = 30.4 bits (67), Expect = 4.7 Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 2/59 (3%) Frame = -1 Query: 243 WVLGTVY--FSGTASMVQSAVSCRRQRLFFLPSAIVHLHVQRGPPRQAPCNIATGCLTG 73 WVL T T ++ AV+ L P + HL QR P +A C +AT L G Sbjct: 111 WVLATRVPRLPSTILLMNLAVADLLLALVLPPRLVYHLRGQRWPFGEAACRVATAALYG 169
>LRP8_HUMAN (Q14114) Low-density lipoprotein receptor-related protein 8| precursor (Apolipoprotein E receptor 2) Length = 963 Score = 30.0 bits (66), Expect = 6.2 Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 12/76 (15%) Frame = +2 Query: 122 PRCTCKC--TIALGKKKRRCLR--QETADWTIDAVPEKYTVPST--------QRYQLKGW 265 P+ TC C T+ LG +RC R Q T+ T+ + + TVP+T R + Sbjct: 715 PKYTCACPDTMWLGPDMKRCYRAPQSTSTTTLASTMTR-TVPATTRAPGTTVHRSTYQNH 773 Query: 266 STGTAPLDSSIP*SIN 313 ST T L +++P S++ Sbjct: 774 STETPSLTAAVPSSVS 789
>CCDC9_HUMAN (Q9Y3X0) Coiled-coil domain-containing protein 9| Length = 531 Score = 30.0 bits (66), Expect = 6.2 Identities = 19/59 (32%), Positives = 28/59 (47%) Frame = +3 Query: 102 KELVWEGLVVHVSVQSRSVKKKGAVFDKRRRTGPSMRCRRNIQYPAPSGIN*RGGPPVQ 278 K+ EG+ V + RSV+K+ + + GPS RR+ P P G + G P Q Sbjct: 43 KKAELEGVAVTAPRKGRSVEKENVAVESEKNLGPS---RRSPGTPRPPGASKGGRTPPQ 98
>CHK1_CHICK (Q8AYC9) Serine/threonine-protein kinase Chk1 (EC 2.7.11.1)| Length = 476 Score = 29.6 bits (65), Expect = 8.0 Identities = 19/95 (20%), Positives = 38/95 (40%) Frame = -1 Query: 639 MVKRETSFASQRTPQEIMSKIEEACGPLGFNVRKQNYKMKLKGDKTGRKGHLSVATEVFE 460 +V+R T F ++ + + C +G+ ++ R L + E Sbjct: 373 LVRRMTRFFTKLDADGSYRSLRDVCEKMGYGWKQSCTNQVTISTTDRRNNKLIFKVNLLE 432 Query: 459 VAPSLHMVELRKTGGDTLEFHSFYQNFSSELKDIV 355 + + +V+ R + GD LEF + +L D+V Sbjct: 433 MESRI-LVDFRLSKGDGLEFKRHFLKIKGKLSDVV 466 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 106,215,887 Number of Sequences: 219361 Number of extensions: 2351168 Number of successful extensions: 6417 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 6204 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6415 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6086476506 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
