ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags30c17
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009345.1| Triticum aestivum clone wlm4.pk0022.h12:fis, full... 728 0.0
2dbj|AK111613.1| Oryza sativa (japonica cultivar-group) cDNA clon... 220 4e-54
3gb|AY105676.1| Zea mays PCO101325 mRNA sequence 180 4e-42
4dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 145 2e-31
5gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome... 145 2e-31
6dbj|AP006629.1| Lotus japonicus genomic DNA, chromosome 2, clone... 113 7e-22
7emb|AJ517208.1|MTR517208 Medicago truncatula mRNA for phosphatid... 109 1e-20
8gb|L27265.1|SOYPI3K5X Glycine max phosphatidylinositol 3-kinase ... 105 2e-19
9gb|L29770.1|SOYP3KIN Glycine max phosphatidylinositol 3-kinase m... 105 2e-19
10ref|XM_481474.1| Oryza sativa (japonica cultivar-group), mRNA 101 3e-18
11gb|AY360390.1| Oryza sativa (japonica cultivar-group) chromosome... 101 3e-18
12gb|AY360389.1| Oryza sativa (japonica cultivar-group) chromosome... 101 3e-18
13dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 101 3e-18
14dbj|AP005693.2| Oryza sativa (japonica cultivar-group) genomic D... 101 3e-18
15dbj|AK111577.1| Oryza sativa (japonica cultivar-group) cDNA clon... 101 3e-18
16dbj|AK111693.1| Oryza sativa (japonica cultivar-group) cDNA clon... 94 7e-16
17gb|DQ118424.2| Phaseolus vulgaris phosphatidylinositol 3-kinase ... 90 1e-14
18gb|DQ118425.1| Phaseolus vulgaris phosphatidylinositol 3-kinase ... 90 1e-14
19ref|NM_104735.2| Arabidopsis thaliana ATVPS34; inositol or phosp... 58 4e-05
20gb|BT000878.1| Arabidopsis thaliana clone C105027 putative phosp... 58 4e-05
21gb|AY080724.1| Arabidopsis thaliana putative phosphatidylinosito... 58 4e-05
22dbj|AK221298.1| Arabidopsis thaliana mRNA for phosphatidylinosit... 58 4e-05
23gb|AC002292.1|AC002292 Arabidopsis thaliana BAC F8A5, complete s... 58 4e-05
24emb|BX815243.1|CNS0AE14 Arabidopsis thaliana Full-length cDNA Co... 58 4e-05
25gb|U10669.1|U10669 Arabidopsis thaliana phosphatidylinositol 3-k... 58 4e-05
26gb|BT013083.1| Lycopersicon esculentum clone 114347R, mRNA sequence 52 0.002
27gb|AY142114.1| Brassica napus phosphatidylinositol 3-kinase mRNA... 50 0.009
28emb|AL391222.1|ATT5K6 Arabidopsis thaliana DNA chromosome 5, BAC... 46 0.14
29emb|AL365234.1|ATT30N20 Arabidopsis thaliana DNA chromosome 5, B... 46 0.14
30gb|AY701317.1| Nicotiana tabacum phosphoinositide 3-kinase (PI3K... 46 0.14
31gb|AY551095.1| Crassostrea gigas cyclophilin mRNA, complete cds 42 2.3
32ref|XM_418179.1| PREDICTED: Gallus gallus similar to RAN binding... 42 2.3
33ref|XM_647881.1| Entamoeba histolytica HM-1:IMSS Sec23 protein (... 42 2.3
34ref|XM_786319.1| PREDICTED: Strongylocentrotus purpuratus simila... 42 2.3
35emb|AL035695.17|HS404G5 Human DNA sequence from clone RP3-404G5 ... 42 2.3
36gb|AC103784.2| Homo sapiens chromosome 8, clone RP11-715C17, com... 42 2.3
37gb|AC023405.6| Homo sapiens chromosome 8, clone RP11-199K17, com... 42 2.3
38gb|AC023762.8| Homo sapiens chromosome 8, clone RP11-401N18, com... 42 2.3
39dbj|AB090237.1| Homo sapiens gene for estrogen receptor alpha, e... 42 2.3
40gb|AC154426.2| Mus musculus BAC clone RP24-199A21 from chromosom... 40 8.9
41ref|XM_526375.1| PREDICTED: Pan troglodytes similar to SQTR9367 ... 40 8.9
42gb|BC061981.1| Rattus norvegicus phosphoinositide-3-kinase, clas... 40 8.9
43emb|BX957306.12| Zebrafish DNA sequence from clone DKEY-119H24 i... 40 8.9
44emb|AL450364.12| Human DNA sequence from clone RP11-499P20 on ch... 40 8.9
45emb|AJ006710.1|RNO6710 Rattus norvegicus mRNA for phosphatidylin... 40 8.9
46gb|AC096947.2| Homo sapiens chromosome 1 clone RP4-802A10, compl... 40 8.9
47gb|AC005045.2| Homo sapiens BAC clone CTB-12D21 from 7q11.2-q22,... 40 8.9
48gb|AC068919.4| Homo sapiens BAC clone RP11-340I19 from 2, comple... 40 8.9
49gb|AC023051.21|AC023051 Homo sapiens 12 BAC RP11-666F17 (Roswell... 40 8.9
50ref|NM_022958.2| Rattus norvegicus phosphoinositide-3-kinase, cl... 40 8.9
51gb|AC172370.2| Gallus gallus BAC clone CH261-119J18 from chromos... 40 8.9
52emb|AL845265.20| Mouse DNA sequence from clone RP23-158O8 on chr... 40 8.9
53gb|AC147437.2| Gallus gallus BAC clone CH261-80L21 from chromoso... 40 8.9 
>gb|BT009345.1| Triticum aestivum clone wlm4.pk0022.h12:fis, full insert mRNA
            sequence
          Length = 1191

 Score =  728 bits (367), Expect = 0.0
 Identities = 466/497 (93%), Gaps = 4/497 (0%)
 Strand = Plus / Minus

                                                                        
Query: 159  tgttaattacatcacaaacaagaagatttacataagagacatattcacaaattcgtgtta 218
            |||||||||||||||| ||| || |||||||||||   | | ||||||||||| |  || 
Sbjct: 1005 tgttaattacatcacacacaggacgatttacataaagaagacattcacaaatttgcattt 946

                                                                        
Query: 219  cgtaagttagaagtatccaacggggaaataaagtatgtgtgctcatttgcccatcatttc 278
            |||||||||||||| |||||||||||||||||||| ||||||||||||| |||| |||||
Sbjct: 945  cgtaagttagaagtgtccaacggggaaataaagtacgtgtgctcatttgtccattatttc 886

                                                                        
Query: 279  aacgttatgctgtaaatctatcgcattctt-tcctcttaccattcagtctctgcttgaca 337
             ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||
Sbjct: 885  cacgttatgctgtaaatctatcgcattcgtctcctcttaccattcagtctctgcttgaca 826

                                                                        
Query: 338  tctgttgttatctgttaatagtctgctgcagcctatacaagcagggagaagtggtcatcg 397
            ||||||||||| ||||||||||| ||||||||| |||||| |   |||||||||||||||
Sbjct: 825  tctgttgttatttgttaatagtccgctgcagccaatacaaac---gagaagtggtcatcg 769

                                                                        
Query: 398  ccaatattgagcccatctatggatggtctcaaccatttgagggaacaatgcgctgacact 457
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 768  ccaatattgagcccatctatggatggtctcaaccatttgagggaacaatgcgctgacact 709

                                                                        
Query: 458  atcgttgataagaccctggaagaaatgtatagcctcctcatcgtccagatccagacggaa 517
            |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 708  atcgttgataaggccctggaagaaatgtatagcctcctcatcgtccagatccagccggaa 649

                                                                        
Query: 518  tttctcctgaaccttaagggtcgcattttcgtcggtagagatatctggaatacttgatct 577
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 648  tttctcctgaaccttaagggtcgcattttcctcggtagagatatctggaatacttgatct 589

                                                                        
Query: 578  ttccatcaacgtgaagagattcaatataaggctgctgttattccttaaaatgttgtatgc 637
            ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||
Sbjct: 588  ttccatcaacgtgaagagattcagtataaggctgctgttattccttaagatgttgtatgc 529

                             
Query: 638  ttcgcagcagtaggact 654
            |||||||||||||||||
Sbjct: 528  ttcgcagcagtaggact 512



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                           
Query: 63   tatcaacgcatcaccaccacatattatatataccgattacatcacac 109
            ||||||| |||  ||||||||||||| |||| | |||||||||||||
Sbjct: 1102 tatcaacacattgccaccacatattacatatgctgattacatcacac 1056
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>dbj|AK111613.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013099I11, full
            insert sequence
          Length = 3065

 Score =  220 bits (111), Expect = 4e-54
 Identities = 222/259 (85%)
 Strand = Plus / Minus

                                                                        
Query: 396  cgccaatattgagcccatctatggatggtctcaaccatttgagggaacaatgcgctgaca 455
            ||||| |||||||||||||||||||| ||||||||||| ||||||||||| |||||||| 
Sbjct: 2741 cgccagtattgagcccatctatggattgtctcaaccatctgagggaacaaagcgctgacg 2682

                                                                        
Query: 456  ctatcgttgataagaccctggaagaaatgtatagcctcctcatcgtccagatccagacgg 515
            || |||||||||||| | |||||||||||||| || |||||||| |||||||| || || 
Sbjct: 2681 ctttcgttgataagatcttggaagaaatgtatggcttcctcatcttccagatcaagccga 2622

                                                                        
Query: 516  aatttctcctgaaccttaagggtcgcattttcgtcggtagagatatctggaatacttgat 575
            |||||||| |||| |||||||   |||||||| ||| ||| ||| ||||||||| |||||
Sbjct: 2621 aatttctcttgaagcttaaggcctgcattttcctcgttagtgatgtctggaatatttgat 2562

                                                                        
Query: 576  ctttccatcaacgtgaagagattcaatataaggctgctgttattccttaaaatgttgtat 635
            |||  ||||||  |||| ||||||||||  ||||| |||   ||||||||||||||||||
Sbjct: 2561 cttctcatcaagttgaacagattcaatacgaggctactggacttccttaaaatgttgtat 2502

                               
Query: 636  gcttcgcagcagtaggact 654
            |||||||| ||||| ||||
Sbjct: 2501 gcttcgcaacagtatgact 2483
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>gb|AY105676.1| Zea mays PCO101325 mRNA sequence
          Length = 586

 Score =  180 bits (91), Expect = 4e-42
 Identities = 121/131 (92%)
 Strand = Plus / Minus

                                                                       
Query: 396 cgccaatattgagcccatctatggatggtctcaaccatttgagggaacaatgcgctgaca 455
           |||||||||||||||||||||||||||||||||||||||||||||||||  || || || 
Sbjct: 294 cgccaatattgagcccatctatggatggtctcaaccatttgagggaacagagcactcacg 235

                                                                       
Query: 456 ctatcgttgataagaccctggaagaaatgtatagcctcctcatcgtccagatccagacgg 515
           ||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||  |||
Sbjct: 234 ctatcgttgataagatcctggaagaaatgtatagcttcctcgtcgtccagatccaaccgg 175

                      
Query: 516 aatttctcctg 526
           |||||||||||
Sbjct: 174 aatttctcctg 164
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score =  145 bits (73), Expect = 2e-31
 Identities = 118/133 (88%)
 Strand = Plus / Plus

                                                                           
Query: 396     cgccaatattgagcccatctatggatggtctcaaccatttgagggaacaatgcgctgaca 455
               ||||| |||||||||||||||||||| ||||||||||| ||||||||||| |||||||| 
Sbjct: 4796822 cgccagtattgagcccatctatggattgtctcaaccatctgagggaacaaagcgctgacg 4796881

                                                                           
Query: 456     ctatcgttgataagaccctggaagaaatgtatagcctcctcatcgtccagatccagacgg 515
               || |||||||||||| | |||||||||||||| || |||||||| |||||||| || || 
Sbjct: 4796882 ctttcgttgataagatcttggaagaaatgtatggcttcctcatcttccagatcaagccga 4796941

                            
Query: 516     aatttctcctgaa 528
               |||||||| ||||
Sbjct: 4796942 aatttctcttgaa 4796954



 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 98/115 (85%)
 Strand = Plus / Plus

                                                                           
Query: 540     gcattttcgtcggtagagatatctggaatacttgatctttccatcaacgtgaagagattc 599
               |||||||| ||| ||| ||| ||||||||| ||||||||  ||||||  |||| ||||||
Sbjct: 4797117 gcattttcctcgttagtgatgtctggaatatttgatcttctcatcaagttgaacagattc 4797176

                                                                      
Query: 600     aatataaggctgctgttattccttaaaatgttgtatgcttcgcagcagtaggact 654
               ||||| ||||| |||   |||||||||||||||||||||||||| ||||| ||||
Sbjct: 4797177 aatatgaggctactggacttccttaaaatgttgtatgcttcgcaacagtatgact 4797231
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>gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0453H11,
             complete sequence
          Length = 187956

 Score =  145 bits (73), Expect = 2e-31
 Identities = 118/133 (88%)
 Strand = Plus / Plus

                                                                         
Query: 396   cgccaatattgagcccatctatggatggtctcaaccatttgagggaacaatgcgctgaca 455
             ||||| |||||||||||||||||||| ||||||||||| ||||||||||| |||||||| 
Sbjct: 69230 cgccagtattgagcccatctatggattgtctcaaccatctgagggaacaaagcgctgacg 69289

                                                                         
Query: 456   ctatcgttgataagaccctggaagaaatgtatagcctcctcatcgtccagatccagacgg 515
             || |||||||||||| | |||||||||||||| || |||||||| |||||||| || || 
Sbjct: 69290 ctttcgttgataagatcttggaagaaatgtatggcttcctcatcttccagatcaagccga 69349

                          
Query: 516   aatttctcctgaa 528
             |||||||| ||||
Sbjct: 69350 aatttctcttgaa 69362



 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 98/115 (85%)
 Strand = Plus / Plus

                                                                         
Query: 540   gcattttcgtcggtagagatatctggaatacttgatctttccatcaacgtgaagagattc 599
             |||||||| ||| ||| ||| ||||||||| ||||||||  ||||||  |||| ||||||
Sbjct: 69525 gcattttcctcgttagtgatgtctggaatatttgatcttctcatcaagttgaacagattc 69584

                                                                    
Query: 600   aatataaggctgctgttattccttaaaatgttgtatgcttcgcagcagtaggact 654
             ||||| ||||| |||   |||||||||||||||||||||||||| ||||| ||||
Sbjct: 69585 aatatgaggctactggacttccttaaaatgttgtatgcttcgcaacagtatgact 69639
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>dbj|AP006629.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT10B11, TM0008,
             complete sequence
          Length = 116223

 Score =  113 bits (57), Expect = 7e-22
 Identities = 84/93 (90%)
 Strand = Plus / Plus

                                                                         
Query: 396   cgccaatattgagcccatctatggatggtctcaaccatttgagggaacaatgcgctgaca 455
             ||||||||||||||||| | ||| |||||||||||||| |||||||||||||| || |||
Sbjct: 26975 cgccaatattgagcccaacgatgaatggtctcaaccatctgagggaacaatgcactcaca 27034

                                              
Query: 456   ctatcgttgataagaccctggaagaaatgtata 488
             || || ||||||||| |||||||||||||||||
Sbjct: 27035 ctctcattgataagatcctggaagaaatgtata 27067
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>emb|AJ517208.1|MTR517208 Medicago truncatula mRNA for phosphatidylinositol 3-kinase (pi3k
            gene)
          Length = 3050

 Score =  109 bits (55), Expect = 1e-20
 Identities = 82/91 (90%)
 Strand = Plus / Minus

                                                                        
Query: 398  ccaatattgagcccatctatggatggtctcaaccatttgagggaacaatgcgctgacact 457
            ||||||||||||||| | ||| |||||||||||||| |||||||||||||| || || ||
Sbjct: 2514 ccaatattgagcccaacgatgaatggtctcaaccatctgagggaacaatgcactcacgct 2455

                                           
Query: 458  atcgttgataagaccctggaagaaatgtata 488
             |||||||||||| |||||||||||||||||
Sbjct: 2454 ctcgttgataagatcctggaagaaatgtata 2424
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>gb|L27265.1|SOYPI3K5X Glycine max phosphatidylinositol 3-kinase mRNA, complete cds
          Length = 2987

 Score =  105 bits (53), Expect = 2e-19
 Identities = 83/93 (89%)
 Strand = Plus / Minus

                                                                        
Query: 396  cgccaatattgagcccatctatggatggtctcaaccatttgagggaacaatgcgctgaca 455
            ||||||||||||||||| | |||||| ||||||||||| |||||||| ||||| || |||
Sbjct: 2502 cgccaatattgagcccaacgatggatagtctcaaccatctgagggaataatgcactcaca 2443

                                             
Query: 456  ctatcgttgataagaccctggaagaaatgtata 488
            || || ||||||||| |||||||||||||||||
Sbjct: 2442 ctctcattgataagatcctggaagaaatgtata 2410
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>gb|L29770.1|SOYP3KIN Glycine max phosphatidylinositol 3-kinase mRNA, complete cds
          Length = 2830

 Score =  105 bits (53), Expect = 2e-19
 Identities = 83/93 (89%)
 Strand = Plus / Minus

                                                                        
Query: 396  cgccaatattgagcccatctatggatggtctcaaccatttgagggaacaatgcgctgaca 455
            ||||||||||||||||| | |||||| ||||||||||| |||||||| ||||| || |||
Sbjct: 2552 cgccaatattgagcccaacgatggatagtctcaaccatctgagggaataatgcactcaca 2493

                                             
Query: 456  ctatcgttgataagaccctggaagaaatgtata 488
            || || ||||||||| |||||||||||||||||
Sbjct: 2492 ctctcattgataagatcctggaagaaatgtata 2460
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>ref|XM_481474.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2505

 Score =  101 bits (51), Expect = 3e-18
 Identities = 84/95 (88%)
 Strand = Plus / Minus

                                                                        
Query: 416  atggatggtctcaaccatttgagggaacaatgcgctgacactatcgttgataagaccctg 475
            ||||||||||||||||| ||||||||| || || |||| ||| |||||||||||||||||
Sbjct: 2481 atggatggtctcaaccacttgagggaagaaagcactgatactttcgttgataagaccctg 2422

                                               
Query: 476  gaagaaatgtatagcctcctcatcgtccagatcca 510
            ||  ||||||||||| ||||| ||||| |||||||
Sbjct: 2421 gagaaaatgtatagcatcctcgtcgtctagatcca 2387



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 627  atgttgtatgcttcgcagcagtaggact 654
            ||||||||||| ||||| ||||||||||
Sbjct: 2267 atgttgtatgcctcgcaacagtaggact 2240
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>gb|AY360390.1| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0074N12,
              complete sequence
          Length = 187972

 Score =  101 bits (51), Expect = 3e-18
 Identities = 84/95 (88%)
 Strand = Plus / Plus

                                                                          
Query: 416    atggatggtctcaaccatttgagggaacaatgcgctgacactatcgttgataagaccctg 475
              ||||||||||||||||| ||||||||| || || |||| ||| |||||||||||||||||
Sbjct: 184944 atggatggtctcaaccacttgagggaagaaagcactgatactttcgttgataagaccctg 185003

                                                 
Query: 476    gaagaaatgtatagcctcctcatcgtccagatcca 510
              ||  ||||||||||| ||||| ||||| |||||||
Sbjct: 185004 gagaaaatgtatagcatcctcgtcgtctagatcca 185038



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 627    atgttgtatgcttcgcagcagtaggact 654
              ||||||||||| ||||| ||||||||||
Sbjct: 186378 atgttgtatgcctcgcaacagtaggact 186405
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>gb|AY360389.1| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0024A05,
             complete sequence
          Length = 82985

 Score =  101 bits (51), Expect = 3e-18
 Identities = 84/95 (88%)
 Strand = Plus / Minus

                                                                         
Query: 416   atggatggtctcaaccatttgagggaacaatgcgctgacactatcgttgataagaccctg 475
             ||||||||||||||||| ||||||||| || || |||| ||| |||||||||||||||||
Sbjct: 65925 atggatggtctcaaccacttgagggaagaaagcactgatactttcgttgataagaccctg 65866

                                                
Query: 476   gaagaaatgtatagcctcctcatcgtccagatcca 510
             ||  ||||||||||| ||||| ||||| |||||||
Sbjct: 65865 gagaaaatgtatagcatcctcgtcgtctagatcca 65831



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 627   atgttgtatgcttcgcagcagtaggact 654
             ||||||||||| ||||| ||||||||||
Sbjct: 64491 atgttgtatgcctcgcaacagtaggact 64464
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  101 bits (51), Expect = 3e-18
 Identities = 84/95 (88%)
 Strand = Plus / Plus

                                                                            
Query: 416      atggatggtctcaaccatttgagggaacaatgcgctgacactatcgttgataagaccctg 475
                ||||||||||||||||| ||||||||| || || |||| ||| |||||||||||||||||
Sbjct: 12847765 atggatggtctcaaccacttgagggaagaaagcactgatactttcgttgataagaccctg 12847824

                                                   
Query: 476      gaagaaatgtatagcctcctcatcgtccagatcca 510
                ||  ||||||||||| ||||| ||||| |||||||
Sbjct: 12847825 gagaaaatgtatagcatcctcgtcgtctagatcca 12847859



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 627      atgttgtatgcttcgcagcagtaggact 654
                ||||||||||| ||||| ||||||||||
Sbjct: 12849199 atgttgtatgcctcgcaacagtaggact 12849226
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>dbj|AP005693.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0061E21
          Length = 155085

 Score =  101 bits (51), Expect = 3e-18
 Identities = 84/95 (88%)
 Strand = Plus / Plus

                                                                         
Query: 416   atggatggtctcaaccatttgagggaacaatgcgctgacactatcgttgataagaccctg 475
             ||||||||||||||||| ||||||||| || || |||| ||| |||||||||||||||||
Sbjct: 48283 atggatggtctcaaccacttgagggaagaaagcactgatactttcgttgataagaccctg 48342

                                                
Query: 476   gaagaaatgtatagcctcctcatcgtccagatcca 510
             ||  ||||||||||| ||||| ||||| |||||||
Sbjct: 48343 gagaaaatgtatagcatcctcgtcgtctagatcca 48377



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 627   atgttgtatgcttcgcagcagtaggact 654
             ||||||||||| ||||| ||||||||||
Sbjct: 49717 atgttgtatgcctcgcaacagtaggact 49744
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>dbj|AK111577.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075F18, full
            insert sequence
          Length = 4519

 Score =  101 bits (51), Expect = 3e-18
 Identities = 84/95 (88%)
 Strand = Plus / Minus

                                                                        
Query: 416  atggatggtctcaaccatttgagggaacaatgcgctgacactatcgttgataagaccctg 475
            ||||||||||||||||| ||||||||| || || |||| ||| |||||||||||||||||
Sbjct: 4010 atggatggtctcaaccacttgagggaagaaagcactgatactttcgttgataagaccctg 3951

                                               
Query: 476  gaagaaatgtatagcctcctcatcgtccagatcca 510
            ||  ||||||||||| ||||| ||||| |||||||
Sbjct: 3950 gagaaaatgtatagcatcctcgtcgtctagatcca 3916



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 627  atgttgtatgcttcgcagcagtaggact 654
            ||||||||||| ||||| ||||||||||
Sbjct: 3805 atgttgtatgcctcgcaacagtaggact 3778
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>dbj|AK111693.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004E13, full
            insert sequence
          Length = 4071

 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 83/95 (87%)
 Strand = Plus / Minus

                                                                        
Query: 416  atggatggtctcaaccatttgagggaacaatgcgctgacactatcgttgataagaccctg 475
            ||||||||||||||||| ||||||||| || || |||| ||| ||||| |||||||||||
Sbjct: 3921 atggatggtctcaaccacttgagggaagaaagcactgatactttcgttcataagaccctg 3862

                                               
Query: 476  gaagaaatgtatagcctcctcatcgtccagatcca 510
            ||  ||||||||||| ||||| ||||| |||||||
Sbjct: 3861 gagaaaatgtatagcatcctcgtcgtctagatcca 3827



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 627  atgttgtatgcttcgcagcagtaggact 654
            ||||||||||| ||||| ||||||||||
Sbjct: 3716 atgttgtatgcctcgcaacagtaggact 3689
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>gb|DQ118424.2| Phaseolus vulgaris phosphatidylinositol 3-kinase 1 (PI3K1) gene,
             complete cds
          Length = 13075

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 81/93 (87%)
 Strand = Plus / Minus

                                                                         
Query: 396   cgccaatattgagcccatctatggatggtctcaaccatttgagggaacaatgcgctgaca 455
             ||||||||||||||||| | |||||| ||||||||||| |||||||| ||||| || |||
Sbjct: 12539 cgccaatattgagcccaacgatggatagtctcaaccatctgagggaataatgcactcaca 12480

                                              
Query: 456   ctatcgttgataagaccctggaagaaatgtata 488
             || || || || ||| |||||||||||||||||
Sbjct: 12479 ctctcattaatcagatcctggaagaaatgtata 12447
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>gb|DQ118425.1| Phaseolus vulgaris phosphatidylinositol 3-kinase 1 (PI3K1) mRNA,
            complete cds
          Length = 2694

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 81/93 (87%)
 Strand = Plus / Minus

                                                                        
Query: 396  cgccaatattgagcccatctatggatggtctcaaccatttgagggaacaatgcgctgaca 455
            ||||||||||||||||| | |||||| ||||||||||| |||||||| ||||| || |||
Sbjct: 2453 cgccaatattgagcccaacgatggatagtctcaaccatctgagggaataatgcactcaca 2394

                                             
Query: 456  ctatcgttgataagaccctggaagaaatgtata 488
            || || || || ||| |||||||||||||||||
Sbjct: 2393 ctctcattaatcagatcctggaagaaatgtata 2361
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>ref|NM_104735.2| Arabidopsis thaliana ATVPS34; inositol or phosphatidylinositol
            kinase/ phosphatidylinositol 3-kinase/
            phosphotransferase, alcohol group as acceptor AT1G60490
            (ATVPS34) mRNA, complete cds
          Length = 2764

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                             
Query: 396  cgccaatattgagcccatctatggatggtctcaaccatttgagggaaca 444
            ||||| |||||||||||||| || ||||| ||||||||||| |||||||
Sbjct: 2552 cgccagtattgagcccatctgtgtatggtttcaaccatttgcgggaaca 2504
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>gb|BT000878.1| Arabidopsis thaliana clone C105027 putative phosphatidylinositol
            3-kinase (At1g60490) mRNA, complete cds
          Length = 2476

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                             
Query: 396  cgccaatattgagcccatctatggatggtctcaaccatttgagggaaca 444
            ||||| |||||||||||||| || ||||| ||||||||||| |||||||
Sbjct: 2441 cgccagtattgagcccatctgtgtatggtttcaaccatttgcgggaaca 2393
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>gb|AY080724.1| Arabidopsis thaliana putative phosphatidylinositol 3-kinase
            (At1g60490) mRNA, partial cds
          Length = 1725

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                             
Query: 396  cgccaatattgagcccatctatggatggtctcaaccatttgagggaaca 444
            ||||| |||||||||||||| || ||||| ||||||||||| |||||||
Sbjct: 1496 cgccagtattgagcccatctgtgtatggtttcaaccatttgcgggaaca 1448
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>dbj|AK221298.1| Arabidopsis thaliana mRNA for phosphatidylinositol 3-kinase, partial
            cds, clone: RAFL24-26-M18
          Length = 1308

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                             
Query: 396  cgccaatattgagcccatctatggatggtctcaaccatttgagggaaca 444
            ||||| |||||||||||||| || ||||| ||||||||||| |||||||
Sbjct: 1100 cgccagtattgagcccatctgtgtatggtttcaaccatttgcgggaaca 1052
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>gb|AC002292.1|AC002292 Arabidopsis thaliana BAC F8A5, complete sequence
          Length = 120787

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 44/49 (89%)
 Strand = Plus / Plus

                                                             
Query: 396  cgccaatattgagcccatctatggatggtctcaaccatttgagggaaca 444
            ||||| |||||||||||||| || ||||| ||||||||||| |||||||
Sbjct: 9786 cgccagtattgagcccatctgtgtatggtttcaaccatttgcgggaaca 9834
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>emb|BX815243.1|CNS0AE14 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS45ZH02 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 2704

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                             
Query: 396  cgccaatattgagcccatctatggatggtctcaaccatttgagggaaca 444
            ||||| |||||||||||||| || ||||| ||||||||||| |||||||
Sbjct: 2531 cgccagtattgagcccatctgtgtatggtttcaaccatttgcgggaaca 2483
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>gb|U10669.1|U10669 Arabidopsis thaliana phosphatidylinositol 3-kinase (AtVps34) mRNA,
            complete cds
          Length = 2760

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                             
Query: 396  cgccaatattgagcccatctatggatggtctcaaccatttgagggaaca 444
            ||||| |||||||||||||| || ||||| ||||||||||| |||||||
Sbjct: 2562 cgccagtattgagcccatctgtgtatggtttcaaccatttgcgggaaca 2514
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>gb|BT013083.1| Lycopersicon esculentum clone 114347R, mRNA sequence
          Length = 2662

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                        
Query: 420  atggtctcaaccatttgagggaacaatgcgctgacactatcgttgataagaccctggaag 479
            ||||||||||||||||| || || ||||| || ||||| || ||||||||| |||| |||
Sbjct: 2474 atggtctcaaccatttgcggaaataatgcactaacactttcattgataagatcctgaaag 2415

              
Query: 480  aa 481
            ||
Sbjct: 2414 aa 2413
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>gb|AY142114.1| Brassica napus phosphatidylinositol 3-kinase mRNA, complete cds
          Length = 2443

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                             
Query: 396  cgccaatattgagcccatctatggatggtctcaaccatttgagggaaca 444
            ||||| ||||||||||| || || ||||| ||||||||||| |||||||
Sbjct: 2438 cgccagtattgagcccacctgtgtatggtttcaaccatttgcgggaaca 2390
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>emb|AL391222.1|ATT5K6 Arabidopsis thaliana DNA chromosome 5, BAC clone T5K6 (ESSA project)
          Length = 96379

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 179   agaagatttacataagagacata 201
             |||||||||||||||||||||||
Sbjct: 40588 agaagatttacataagagacata 40566
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>emb|AL365234.1|ATT30N20 Arabidopsis thaliana DNA chromosome 5, BAC clone T30N20 (ESSA project)
          Length = 98473

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 179   agaagatttacataagagacata 201
             |||||||||||||||||||||||
Sbjct: 97076 agaagatttacataagagacata 97054
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>gb|AY701317.1| Nicotiana tabacum phosphoinositide 3-kinase (PI3K) mRNA, complete cds
          Length = 2779

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                       
Query: 423  gtctcaaccatttgagggaacaatgcgctgacactatcgttgataagaccctggaagaa 481
            |||||||||||||| || || ||||| |||||||| || || |||||| |||| |||||
Sbjct: 2438 gtctcaaccatttgtggaaataatgcactgacactttcattaataagatcctgaaagaa 2380
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>gb|AY551095.1| Crassostrea gigas cyclophilin mRNA, complete cds
          Length = 792

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 117 aaatgttgataaatttgcact 137
           |||||||||||||||||||||
Sbjct: 523 aaatgttgataaatttgcact 503
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>ref|XM_418179.1| PREDICTED: Gallus gallus similar to RAN binding protein 3 isoform
            RANBP3-b; RAN-binding protein-3 (LOC420058), mRNA
          Length = 3150

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 357  agtctgctgcagcctatacaa 377
            |||||||||||||||||||||
Sbjct: 986  agtctgctgcagcctatacaa 1006
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>ref|XM_647881.1| Entamoeba histolytica HM-1:IMSS Sec23 protein (98.t00012)  partial
           mRNA
          Length = 2166

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 579 tccatcaacgtgaagagattcaata 603
           ||||||||| |||||||||||||||
Sbjct: 654 tccatcaacttgaagagattcaata 630
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>ref|XM_786319.1| PREDICTED: Strongylocentrotus purpuratus similar to SEC14-like 2
           (LOC586541), mRNA
          Length = 1056

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 501 tccagatccagacggaatttctcct 525
           ||||||||| |||||||||||||||
Sbjct: 176 tccagatcccgacggaatttctcct 152
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>emb|AL035695.17|HS404G5 Human DNA sequence from clone RP3-404G5 on chromosome 6q24.1-25.2
              Contains the 5' end of the ESR1 gene for estrogen receptor
              1, complete sequence
          Length = 119737

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 363    ctgcagcctatacaagcaggg 383
              |||||||||||||||||||||
Sbjct: 106124 ctgcagcctatacaagcaggg 106104
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>gb|AC103784.2| Homo sapiens chromosome 8, clone RP11-715C17, complete sequence
          Length = 175745

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 111  cagaccaaatgttgataaatt 131
            |||||||||||||||||||||
Sbjct: 9507 cagaccaaatgttgataaatt 9487
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>gb|AC023405.6| Homo sapiens chromosome 8, clone RP11-199K17, complete sequence
          Length = 151859

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 111    cagaccaaatgttgataaatt 131
              |||||||||||||||||||||
Sbjct: 122080 cagaccaaatgttgataaatt 122100
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>gb|AC023762.8| Homo sapiens chromosome 8, clone RP11-401N18, complete sequence
          Length = 120800

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 111    cagaccaaatgttgataaatt 131
              |||||||||||||||||||||
Sbjct: 108987 cagaccaaatgttgataaatt 108967
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>dbj|AB090237.1| Homo sapiens gene for estrogen receptor alpha, exon 1a, 1b, 2
          Length = 56124

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 363  ctgcagcctatacaagcaggg 383
            |||||||||||||||||||||
Sbjct: 2734 ctgcagcctatacaagcaggg 2754
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>gb|AC154426.2| Mus musculus BAC clone RP24-199A21 from chromosome 14, complete
             sequence
          Length = 210568

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 163   aattacatcacaaacaagaa 182
             ||||||||||||||||||||
Sbjct: 17570 aattacatcacaaacaagaa 17551
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>ref|XM_526375.1| PREDICTED: Pan troglodytes similar to SQTR9367 (LOC470992), mRNA
          Length = 2628

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 568  tacttgatctttccatcaac 587
            ||||||||||||||||||||
Sbjct: 1658 tacttgatctttccatcaac 1677
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>gb|BC061981.1| Rattus norvegicus phosphoinositide-3-kinase, class 3, mRNA (cDNA
            clone MGC:72433 IMAGE:5597998), complete cds
          Length = 3147

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                        
Query: 489  gcctcctcatcgtccagatccagacggaatttctcctgaacctt 532
            |||||||||||   ||| ||||||||||| || |||||||||||
Sbjct: 2588 gcctcctcatctgacaggtccagacggaacttatcctgaacctt 2545
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>emb|BX957306.12| Zebrafish DNA sequence from clone DKEY-119H24 in linkage group 1,
            complete sequence
          Length = 224487

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 376  aagcagggagaagtggtcat 395
            ||||||||||||||||||||
Sbjct: 5427 aagcagggagaagtggtcat 5408
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>emb|AL450364.12| Human DNA sequence from clone RP11-499P20 on chromosome 10 Contains
             part of the CACNB2 gene for calcium channel
             voltage-dependent beta 2 subunit and the 3' end of a novel
             gene, complete sequence
          Length = 38089

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 305   tctttcctcttaccattcag 324
             ||||||||||||||||||||
Sbjct: 14390 tctttcctcttaccattcag 14371
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>emb|AJ006710.1|RNO6710 Rattus norvegicus mRNA for phosphatidylinositol 3-kinase
          Length = 2752

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                        
Query: 489  gcctcctcatcgtccagatccagacggaatttctcctgaacctt 532
            |||||||||||   ||| ||||||||||| || |||||||||||
Sbjct: 2570 gcctcctcatctgacaggtccagacggaacttatcctgaacctt 2527
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>gb|AC096947.2| Homo sapiens chromosome 1 clone RP4-802A10, complete sequence
          Length = 148730

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 357   agtctgctgcagcctataca 376
             ||||||||||||||||||||
Sbjct: 28923 agtctgctgcagcctataca 28904
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>gb|AC005045.2| Homo sapiens BAC clone CTB-12D21 from 7q11.2-q22, complete sequence
          Length = 123947

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 262   catttgcccatcatttcaac 281
             ||||||||||||||||||||
Sbjct: 75173 catttgcccatcatttcaac 75192
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>gb|AC068919.4| Homo sapiens BAC clone RP11-340I19 from 2, complete sequence
          Length = 164350

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 612    ctgttattccttaaaatgtt 631
              ||||||||||||||||||||
Sbjct: 148321 ctgttattccttaaaatgtt 148302
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>gb|AC023051.21|AC023051 Homo sapiens 12 BAC RP11-666F17 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 185930

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 168    catcacaaacaagaagatttacataaga 195
              ||||||||||||||| | ||||||||||
Sbjct: 135469 catcacaaacaagaaaacttacataaga 135496
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>ref|NM_022958.2| Rattus norvegicus phosphoinositide-3-kinase, class 3 (Pik3c3), mRNA
          Length = 3147

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                        
Query: 489  gcctcctcatcgtccagatccagacggaatttctcctgaacctt 532
            |||||||||||   ||| ||||||||||| || |||||||||||
Sbjct: 2588 gcctcctcatctgacaggtccagacggaacttatcctgaacctt 2545
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>gb|AC172370.2| Gallus gallus BAC clone CH261-119J18 from chromosome ul, complete
              sequence
          Length = 260878

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 21     acttaaaatagcacccgctt 40
              ||||||||||||||||||||
Sbjct: 195040 acttaaaatagcacccgctt 195021
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>emb|AL845265.20| Mouse DNA sequence from clone RP23-158O8 on chromosome 2, complete
             sequence
          Length = 195031

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 444   aatgcgctgacactatcgtt 463
             ||||||||||||||||||||
Sbjct: 79134 aatgcgctgacactatcgtt 79153
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>gb|AC147437.2| Gallus gallus BAC clone CH261-80L21 from chromosome unknown, complete
              sequence
          Length = 221338

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 369    cctatacaagcagggagaag 388
              ||||||||||||||||||||
Sbjct: 138544 cctatacaagcagggagaag 138525


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,065,295
Number of Sequences: 3902068
Number of extensions: 6065295
Number of successful extensions: 112234
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 112090
Number of HSP's gapped (non-prelim): 141
length of query: 654
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 631
effective length of database: 17,143,297,704
effective search space: 10817420851224
effective search space used: 10817420851224
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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