>PGCA_CANFA (Q28343) Aggrecan core protein precursor (Cartilage-specific|
            proteoglycan core protein) (CSPCP)
          Length = 2333

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 17/46 (36%), Positives = 27/46 (58%)
 Frame = +1

Query: 241  SPAISVTGRTSAHELLSALPTLITTTWSSAGTFHASFPSLASVATT 378
            S A  V+G +S  E+ S+LP+    T+  +G FH +FP++  V  T
Sbjct: 1698 SGAAEVSGESSGAEVGSSLPS---GTYEGSGNFHPAFPTVFLVDRT 1740

>ERCC8_MOUSE (Q8CFD5) DNA excision repair protein ERCC-8 (Cockayne syndrome WD|
           repeat protein CSA homolog)
          Length = 397

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -2

Query: 89  DVFLFQEK*YSHHGTAGACTYCM 21
           DVF F+E  YSHH +  A  +C+
Sbjct: 136 DVFNFEETVYSHHMSPAATKHCL 158

>PRY2_YEAST (P36110) Protein PRY2 precursor (Pathogen related in Sc 2)|
          Length = 329

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +1

Query: 238 TSPAISVTGRTSAHELLSALPTLITTTWSSAGTFHAS 348
           TSP  + +  T+A    +A PT  TTT S+A +  +S
Sbjct: 152 TSPTTTTSPTTTASPTTTASPTTATTTQSTASSTQSS 188


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,179,571
Number of Sequences: 219361
Number of extensions: 744644
Number of successful extensions: 2274
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2217
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2274
length of database: 80,573,946
effective HSP length: 110
effective length of database: 56,444,236
effective search space used: 1354661664
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)