ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags30b23 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_468474.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2179 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 499 tactcgcgaatcgagttgatgtcgatg 525 ||||||||||| ||||||||||||||| Sbjct: 1829 tactcgcgaatagagttgatgtcgatg 1803
>gb|AY022463.1| Oryza sativa microsatellite MRG4788 containing (AGC)X8, genomic sequence Length = 224 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 432 atctcatctcatctcatctgatc 454 ||||||||||||||||||||||| Sbjct: 188 atctcatctcatctcatctgatc 166
>gb|AC136525.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0585E02, complete sequence Length = 138677 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 432 atctcatctcatctcatctgatc 454 ||||||||||||||||||||||| Sbjct: 30351 atctcatctcatctcatctgatc 30329
>gb|AC145476.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1023E01, complete sequence Length = 140322 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 432 atctcatctcatctcatctgatc 454 ||||||||||||||||||||||| Sbjct: 57124 atctcatctcatctcatctgatc 57102
>emb|Z81002.2|HSN53A9 Human DNA sequence from clone LL22NC03-53A9 on chromosome 22 Contains an EST and GSSs, complete sequence Length = 31756 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 432 atctcatctcatctcatctgatc 454 ||||||||||||||||||||||| Sbjct: 21029 atctcatctcatctcatctgatc 21051
>emb|CR382126.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2602197 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 432 atctcatctcatctcatctgatc 454 ||||||||||||||||||||||| Sbjct: 2013734 atctcatctcatctcatctgatc 2013756 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 430 cgatctcatctcatctcatct 450 ||||||||||||||||||||| Sbjct: 1226852 cgatctcatctcatctcatct 1226832
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 432 atctcatctcatctcatctgatc 454 ||||||||||||||||||||||| Sbjct: 13601216 atctcatctcatctcatctgatc 13601194 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 337 acaggcacagcagtagcagcagcaa 361 ||||||||||||| ||||||||||| Sbjct: 27718502 acaggcacagcagcagcagcagcaa 27718526 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 434 ctcatctcatctcatctgatc 454 ||||||||||||||||||||| Sbjct: 17056141 ctcatctcatctcatctgatc 17056121 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 432 atctcatctcatctcatctg 451 |||||||||||||||||||| Sbjct: 29473761 atctcatctcatctcatctg 29473742 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 437 atctcatctcatctgatccg 456 |||||||||||||||||||| Sbjct: 23484202 atctcatctcatctgatccg 23484221
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 499 tactcgcgaatcgagttgatgtcgatg 525 ||||||||||| ||||||||||||||| Sbjct: 35434166 tactcgcgaatagagttgatgtcgatg 35434192 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 432 atctcatctcatctcatctga 452 ||||||||||||||||||||| Sbjct: 21047404 atctcatctcatctcatctga 21047384 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 341 gcacagcagtagcagcagcaatctc 365 |||||||||||||||||||| |||| Sbjct: 8804330 gcacagcagtagcagcagcactctc 8804306 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 433 tctcatctcatctcatctgatccg 456 ||||||| |||||||||||||||| Sbjct: 20746304 tctcatcccatctcatctgatccg 20746327
>dbj|AP003989.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1063_D06 Length = 102439 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 499 tactcgcgaatcgagttgatgtcgatg 525 ||||||||||| ||||||||||||||| Sbjct: 45687 tactcgcgaatagagttgatgtcgatg 45713
>dbj|AP004026.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1136_C04 Length = 103194 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 499 tactcgcgaatcgagttgatgtcgatg 525 ||||||||||| ||||||||||||||| Sbjct: 94714 tactcgcgaatagagttgatgtcgatg 94740
>dbj|AK066031.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013047F17, full insert sequence Length = 2179 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 499 tactcgcgaatcgagttgatgtcgatg 525 ||||||||||| ||||||||||||||| Sbjct: 1829 tactcgcgaatagagttgatgtcgatg 1803
>gb|AC154649.3| Mus musculus BAC clone RP23-156O5 from chromosome 14, complete sequence Length = 227676 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 339 aggcacagcagtagcagcagcaa 361 ||||||||||||||||||||||| Sbjct: 178439 aggcacagcagtagcagcagcaa 178417
>emb|BX284658.1| Human DNA sequence from clone RP1-100G10 on chromosome 22q13.31-13.33, complete sequence Length = 38686 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 432 atctcatctcatctcatctgatc 454 ||||||||||||||||||||||| Sbjct: 27961 atctcatctcatctcatctgatc 27983
>gb|AC135929.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0692D12, complete sequence Length = 164064 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 434 ctcatctcatctcatctgatc 454 ||||||||||||||||||||| Sbjct: 276 ctcatctcatctcatctgatc 256
>gb|AC113333.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1115_B06, complete sequence Length = 139139 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 337 acaggcacagcagtagcagcagcaa 361 ||||||||||||| ||||||||||| Sbjct: 83060 acaggcacagcagcagcagcagcaa 83084
>gb|AC134348.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0530H10, complete sequence Length = 148373 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 434 ctcatctcatctcatctgatc 454 ||||||||||||||||||||| Sbjct: 49508 ctcatctcatctcatctgatc 49488
>ref|XM_761085.1| Theileria parva strain Muguga chromosome 1 3-oxoacyl-[acyl-carrier protein] reductase (TP01_0657) partial mRNA Length = 1344 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 271 tttgaccaataatatgatcaa 291 ||||||||||||||||||||| Sbjct: 469 tttgaccaataatatgatcaa 449
>emb|AL592402.12| Human DNA sequence from clone RP11-554K11 on chromosome 1 Contains a processed pseudogene similar to ribosomal protein L31 (RPL31), complete sequence Length = 200461 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 344 cagcagtagcagcagcaatct 364 ||||||||||||||||||||| Sbjct: 42379 cagcagtagcagcagcaatct 42399
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 539 ggtccatctgccgcatcaggc 559 ||||||||||||||||||||| Sbjct: 678096 ggtccatctgccgcatcaggc 678076
>emb|AL109918.25|HSDJ152L7 Human DNA sequence from clone RP1-152L7 on chromosome 6p11.2-12.3 Contains three glutathione S-transferase pseudogenes, the GSTA2 gene for glutathione S-transferase A2, the gene for a novel protein (PTD011), a HNRNP A/B related protein pseudogene, a SH3BGRL3-like pseudogene and CpG Islands, complete sequence Length = 175940 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 185 ttttcctccattctcttcctg 205 ||||||||||||||||||||| Sbjct: 39979 ttttcctccattctcttcctg 39959
>emb|AL034343.17|HS108C2 Human DNA sequence from clone RP1-108C2 on chromosome 6p12.1-21.1 Contains the MCM3 gene for MCM3 minichromosome maintenance deficient 3 (S. cerevisiae), a CACT (carnitine/acylcarnitine translocase) pseudogene, the IL17F gene for interleukin 17F (ML1 ML-1) and a CpG island, complete sequence Length = 130904 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 191 tccattctcttcctgtatact 211 ||||||||||||||||||||| Sbjct: 61165 tccattctcttcctgtatact 61185
>emb|BX029188.1|CNS08UOO Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA43CE10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 816 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 353 cagcagcaatctccaacaaca 373 ||||||||||||||||||||| Sbjct: 672 cagcagcaatctccaacaaca 652
>emb|BX029187.1|CNS08UON Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA43CE10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 903 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 353 cagcagcaatctccaacaaca 373 ||||||||||||||||||||| Sbjct: 338 cagcagcaatctccaacaaca 358
>emb|BX028581.1|CNS08U7T Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA42CG12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 856 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 353 cagcagcaatctccaacaaca 373 ||||||||||||||||||||| Sbjct: 340 cagcagcaatctccaacaaca 360
>emb|AL589879.21| Mouse DNA sequence from clone RP23-38E20 on chromosome 13 Contains the genes for H2b histone family member A, two H2a, two H4 and an H2b histone family member, a serine/threonine protein kinase pseudogene, a novel pseudogene, a novel gene (4930500C15Rik), the gene for a novel KRAB box and C2H2 Zinc Finger containing protein, a ribosomal protein L21 (RPL21) pseudogene, a TU mitochondrial translation elongation factor (tufa) pseudogene, the 5' end of the gene for a novel protein similar to nuclear envelope pore membrane protein POM121 and four CpG islands, complete sequence Length = 182817 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 353 cagcagcaatctccaacaaca 373 ||||||||||||||||||||| Sbjct: 44769 cagcagcaatctccaacaaca 44749
>emb|AL589651.8| Mouse DNA sequence from clone RP23-138F20 on chromosome 13 Contains five genes for olfactory receptors, a novel gene, the H1f5 gene for H1 histone family member 5, three genes and one pseudogene for H2a histone family members, four genes for H2b, two genes for H4, and two genes for H3 histone family members and seven CpG islands, complete sequence Length = 222823 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 353 cagcagcaatctccaacaaca 373 ||||||||||||||||||||| Sbjct: 220312 cagcagcaatctccaacaaca 220332
>emb|CR391977.5| Zebrafish DNA sequence from clone DKEYP-73B11 in linkage group 25, complete sequence Length = 189510 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 239 catctcttctctaatacaacatcgcagtacaatttga 275 |||||||||||||| ||||||| ||||||| ||||| Sbjct: 110225 catctcttctctaaaacaacatgacagtacattttga 110261
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 432 atctcatctcatctcatctgatccg 456 ||||||||||||||||||| ||||| Sbjct: 6935562 atctcatctcatctcatctcatccg 6935586 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 430 cgatctcatctcatctcatct 450 ||||||||||||||||||||| Sbjct: 2705371 cgatctcatctcatctcatct 2705351
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 430 cgatctcatctcatctcatct 450 ||||||||||||||||||||| Sbjct: 38880967 cgatctcatctcatctcatct 38880947
>dbj|AP003407.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1078G07 Length = 199457 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 430 cgatctcatctcatctcatct 450 ||||||||||||||||||||| Sbjct: 153849 cgatctcatctcatctcatct 153829
>dbj|AP004806.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0710H01 Length = 187107 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 430 cgatctcatctcatctcatct 450 ||||||||||||||||||||| Sbjct: 160712 cgatctcatctcatctcatct 160692
>dbj|AP006554.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0529C07 Length = 174011 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 430 cgatctcatctcatctcatct 450 ||||||||||||||||||||| Sbjct: 117118 cgatctcatctcatctcatct 117098
>dbj|AP004801.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0613F08 Length = 142937 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 341 gcacagcagtagcagcagcaatctc 365 |||||||||||||||||||| |||| Sbjct: 9348 gcacagcagtagcagcagcactctc 9324
>dbj|AP003316.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0696G06 Length = 142571 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 430 cgatctcatctcatctcatct 450 ||||||||||||||||||||| Sbjct: 45753 cgatctcatctcatctcatct 45733
>dbj|AP005522.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0479H10 Length = 139874 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 432 atctcatctcatctcatctgatccg 456 ||||||||||||||||||| ||||| Sbjct: 125087 atctcatctcatctcatctcatccg 125111
>dbj|AP006844.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0052K15 Length = 156250 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 341 gcacagcagtagcagcagcaatctc 365 |||||||||||||||||||| |||| Sbjct: 103409 gcacagcagtagcagcagcactctc 103385
>dbj|AP004017.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1008_F08 Length = 105979 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 432 atctcatctcatctcatctga 452 ||||||||||||||||||||| Sbjct: 49149 atctcatctcatctcatctga 49129
>dbj|AB008267.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MMG4 Length = 79046 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 430 cgatctcatctcatctcatct 450 ||||||||||||||||||||| Sbjct: 55143 cgatctcatctcatctcatct 55163
>dbj|AK108060.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-138-B01, full insert sequence Length = 1668 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 432 atctcatctcatctcatctgatccg 456 ||||||||||||||||||| ||||| Sbjct: 253 atctcatctcatctcatctcatccg 229
>dbj|AK104581.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-B12, full insert sequence Length = 977 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 341 gcacagcagtagcagcagcaatctc 365 |||||||||||||||||||| |||| Sbjct: 934 gcacagcagtagcagcagcactctc 910
>dbj|AK064805.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000D15, full insert sequence Length = 985 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 341 gcacagcagtagcagcagcaatctc 365 |||||||||||||||||||| |||| Sbjct: 944 gcacagcagtagcagcagcactctc 920
>dbj|AK060500.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-F08, full insert sequence Length = 1380 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 430 cgatctcatctcatctcatct 450 ||||||||||||||||||||| Sbjct: 14 cgatctcatctcatctcatct 34
>dbj|AK059303.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-F10, full insert sequence Length = 1054 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 341 gcacagcagtagcagcagcaatctc 365 |||||||||||||||||||| |||| Sbjct: 935 gcacagcagtagcagcagcactctc 911
>ref|NM_116192.3| Arabidopsis thaliana unknown protein AT3G63270 mRNA, complete cds Length = 1581 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 catcttcatctcttctctaa 252 |||||||||||||||||||| Sbjct: 1290 catcttcatctcttctctaa 1309
>gb|AC136217.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0030I14, complete sequence Length = 159035 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 432 atctcatctcatctcatctg 451 |||||||||||||||||||| Sbjct: 121786 atctcatctcatctcatctg 121767
>gb|AC161608.5| Mus musculus BAC clone RP23-146P11 from chromosome 14, complete sequence Length = 198014 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 342 cacagcagtagcagcagcaa 361 |||||||||||||||||||| Sbjct: 3259 cacagcagtagcagcagcaa 3240
>gb|AY546690.1| Piptocephalis corymbifera isolate AFTOL-ID 145 28S large subunit ribosomal RNA gene, partial sequence Length = 3270 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 acattattccatcaactaga 175 |||||||||||||||||||| Sbjct: 2034 acattattccatcaactaga 2015
>ref|XM_416707.1| PREDICTED: Gallus gallus similar to GC-rich sequence DNA-binding factor homolog (LOC418499), mRNA Length = 2554 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 271 tttgaccaataatatgatca 290 |||||||||||||||||||| Sbjct: 2019 tttgaccaataatatgatca 2000
>ref|XM_957516.1| Neurospora crassa OR74A hypothetical protein (NCU06969.1) partial mRNA Length = 2145 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 338 caggcacagcagtagcagcagcaatctc 365 ||||| |||||| ||||||||||||||| Sbjct: 1852 caggcgcagcagcagcagcagcaatctc 1825
>ref|XM_327254.1| Neurospora crassa OR74A hypothetical protein (NCU06969.1) partial mRNA Length = 2145 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 338 caggcacagcagtagcagcagcaatctc 365 ||||| |||||| ||||||||||||||| Sbjct: 1852 caggcgcagcagcagcagcagcaatctc 1825
>gb|AC102091.7| Mus musculus chromosome 18, clone RP23-9K20, complete sequence Length = 252563 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 432 atctcatctcatctcatctg 451 |||||||||||||||||||| Sbjct: 100728 atctcatctcatctcatctg 100747
>gb|AC123751.6| Mus musculus chromosome 8, clone RP24-187F1, complete sequence Length = 159523 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 155 aacattattccatcaactagaata 178 |||||| ||||||||||||||||| Sbjct: 77739 aacattcttccatcaactagaata 77716
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 432 atctcatctcatctcatctg 451 |||||||||||||||||||| Sbjct: 9201814 atctcatctcatctcatctg 9201795
>ref|XM_979109.1| PREDICTED: Mus musculus hypothetical protein LOC670097 (LOC670097), mRNA Length = 411 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 337 acaggcacagcagtagcagcagca 360 |||| ||||||||||||||||||| Sbjct: 332 acagccacagcagtagcagcagca 309
>ref|XM_974910.1| PREDICTED: Mus musculus hypothetical protein LOC665158 (LOC665158), mRNA Length = 411 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 337 acaggcacagcagtagcagcagca 360 |||| ||||||||||||||||||| Sbjct: 332 acagccacagcagtagcagcagca 309
>gb|AC122300.3| Mus musculus BAC clone RP23-275E20 from 7, complete sequence Length = 182032 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 436 catctcatctcatctgatcc 455 |||||||||||||||||||| Sbjct: 167 catctcatctcatctgatcc 186
>ref|XM_541589.2| PREDICTED: Canis familiaris similar to capicua homolog (LOC484475), mRNA Length = 8171 Score = 40.1 bits (20), Expect = 8.4 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 330 gaagacgac-aggcacagcagtagcagcagca 360 ||||||||| ||||||||||| |||||||||| Sbjct: 127 gaagacgacgaggcacagcagcagcagcagca 158
>gb|AF285175.1| Mus musculus PAX1 gene, complete cds Length = 17615 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 431 gatctcatctcatctcatct 450 |||||||||||||||||||| Sbjct: 16002 gatctcatctcatctcatct 16021
>gb|AC115910.6| Mus musculus, clone RP24-480O17, complete sequence Length = 257036 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 tccatcttcatctcttctct 250 |||||||||||||||||||| Sbjct: 36023 tccatcttcatctcttctct 36004
>emb|AL596322.3| Human DNA sequence from clone RP11-31D17 on chromosome 1 Contains a novel gene, complete sequence Length = 129044 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 gtaacacagtaaatagatga 37 |||||||||||||||||||| Sbjct: 35031 gtaacacagtaaatagatga 35050
>emb|AL139084.9| Human DNA sequence from clone RP11-318G11 on chromosome 13 Contains part of the gene for zizimin1 (KIAA1085) and a ribosomal protein L7 (RPL7) pseudogene, complete sequence Length = 80803 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 343 acagcagtagcagcagcaat 362 |||||||||||||||||||| Sbjct: 38939 acagcagtagcagcagcaat 38958
>emb|AL121910.26|HSDJ827L5 Human DNA sequence from clone RP5-827L5 on chromosome 20 Contains two putative novel genes, a CpG island, ESTs, STSs and GSSs, complete sequence Length = 141895 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 432 atctcatctcatctcatctg 451 |||||||||||||||||||| Sbjct: 9883 atctcatctcatctcatctg 9864
>gb|AC092978.10| Homo sapiens 3 BAC RP11-340E6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 58001 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 185 ttttcctccattctcttcctgtat 208 ||||||||||||| |||||||||| Sbjct: 55939 ttttcctccattcccttcctgtat 55962
>ref|XM_970561.1| PREDICTED: Tribolium castaneum similar to CG15319-PB (LOC664565), mRNA Length = 7038 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 574 ctcatctggggcggcggcatgttc 597 |||||||| ||||||||||||||| Sbjct: 5957 ctcatctgcggcggcggcatgttc 5934
>gb|AC023684.4| Drosophila melanogaster X BAC RP98-7P13 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 178077 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 337 acaggcacagcagtagcagcagca 360 ||||||||||||| |||||||||| Sbjct: 101062 acaggcacagcagcagcagcagca 101085
>gb|AC129146.3| Rattus norvegicus 2 BAC CH230-266D19 (Children's Hospital Oakland Research Institute) complete sequence Length = 180291 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 431 gatctcatctcatctcatct 450 |||||||||||||||||||| Sbjct: 46827 gatctcatctcatctcatct 46808
>gb|AC127971.3| Rattus norvegicus 2 BAC CH230-320E2 (Children's Hospital Oakland Research Institute) complete sequence Length = 141084 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 431 gatctcatctcatctcatct 450 |||||||||||||||||||| Sbjct: 41721 gatctcatctcatctcatct 41740
>gb|AF370300.1| Arabidopsis thaliana unknown protein (At3g63270) mRNA, complete cds Length = 1562 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 catcttcatctcttctctaa 252 |||||||||||||||||||| Sbjct: 1255 catcttcatctcttctctaa 1274
>emb|X15596.1|ZMGPC1 Maize Gpc1 gene for glyceraldehyde-3-phosphate dehydrogenase (GADPH) subunit C Length = 5955 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 432 atctcatctcatctcatctgatcc 455 ||||||||||||||||||| |||| Sbjct: 2086 atctcatctcatctcatctcatcc 2109
>emb|CR382124.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome D of strain NRRL Y-1140 of Kluyveromyces lactis Length = 1715506 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 432 atctcatctcatctcatctgatcc 455 ||||||||||||||||||| |||| Sbjct: 1223999 atctcatctcatctcatctcatcc 1224022 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 431 gatctcatctcatctcatct 450 |||||||||||||||||||| Sbjct: 1094294 gatctcatctcatctcatct 1094275
>gb|AC161383.5| Mus musculus BAC clone RP23-68C13 from chromosome 14, complete sequence Length = 195954 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 342 cacagcagtagcagcagcaa 361 |||||||||||||||||||| Sbjct: 75625 cacagcagtagcagcagcaa 75644
>emb|AL627265.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18, complete chromosome; segment 1/20 Length = 251050 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 421 taaaagtgacgatctcatct 440 |||||||||||||||||||| Sbjct: 62534 taaaagtgacgatctcatct 62553
>emb|AL138648.2|ATF16M2 Arabidopsis thaliana DNA chromosome 3, BAC clone F16M2 Length = 75106 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 catcttcatctcttctctaa 252 |||||||||||||||||||| Sbjct: 43591 catcttcatctcttctctaa 43572
>emb|BX908783.8| Zebrafish DNA sequence from clone DKEY-86M2 in linkage group 25, complete sequence Length = 216800 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 432 atctcatctcatctcatctgatcc 455 ||||||||||||||||||| |||| Sbjct: 162917 atctcatctcatctcatctcatcc 162940
>emb|AL731896.10| Mouse DNA sequence from clone RP23-348D11 on chromosome 11 Contains a ribosomal protein L15 (Rpl15) pseudogene and a SNARE protein Ykt (0610042I15Rik) pseudogene, complete sequence Length = 226786 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 431 gatctcatctcatctcatct 450 |||||||||||||||||||| Sbjct: 16973 gatctcatctcatctcatct 16992
>gb|AC163890.2| Glomus intraradices clone JGIATSX-5N24, complete sequence Length = 41409 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 432 atctcatctcatctcatctgatcc 455 ||||||||||||||||||| |||| Sbjct: 4486 atctcatctcatctcatctcatcc 4463
>emb|CR859337.1| Pongo pygmaeus mRNA; cDNA DKFZp469B0120 (from clone DKFZp469B0120) Length = 3449 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 338 caggcacagcagtagcagcagcaa 361 |||||||||||| ||||||||||| Sbjct: 3095 caggcacagcagcagcagcagcaa 3118
>gb|AC104604.7| Drosophila melanogaster X BAC RP98-18K5 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 167902 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 337 acaggcacagcagtagcagcagca 360 ||||||||||||| |||||||||| Sbjct: 7824 acaggcacagcagcagcagcagca 7847
>gb|AC010573.4| Drosophila melanogaster 3L BAC RP98-2M13 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 181927 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 431 gatctcatctcatctcatctgatc 454 ||||||||||||||| |||||||| Sbjct: 119021 gatctcatctcatctaatctgatc 119044
>gb|AC069457.5| Drosophila melanogaster 3L BAC RP98-16J19 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 160366 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 431 gatctcatctcatctcatctgatc 454 ||||||||||||||| |||||||| Sbjct: 50221 gatctcatctcatctaatctgatc 50244
>gb|AC023699.4| Drosophila melanogaster X BAC RP98-11K20 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 177941 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 432 atctcatctcatctcatctg 451 |||||||||||||||||||| Sbjct: 28837 atctcatctcatctcatctg 28818
>tpg|BK003033.1| TPA: TPA_inf: Drosophila melanogaster HDC17515 (HDC17515) gene, complete cds Length = 1872 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 337 acaggcacagcagtagcagcagca 360 ||||||||||||| |||||||||| Sbjct: 1574 acaggcacagcagcagcagcagca 1551
>tpg|BK005052.1| TPA: TPA_inf: Oryza sativa (indica cultivar-group) WRKY transcription factor 49 (WRKY49) gene, complete cds Length = 2920 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 432 atctcatctcatctcatctgatcc 455 ||||||||||||||||||| |||| Sbjct: 531 atctcatctcatctcatctcatcc 554
>gb|AC023708.4| Drosophila melanogaster X BAC RP98-12B22 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 175355 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 432 atctcatctcatctcatctg 451 |||||||||||||||||||| Sbjct: 166995 atctcatctcatctcatctg 166976
>dbj|AP007150.1| Aspergillus oryzae RIB40 genomic DNA, SC009 Length = 1913118 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 432 atctcatctcatctcatctg 451 |||||||||||||||||||| Sbjct: 505981 atctcatctcatctcatctg 506000
>gb|AC016251.9| Homo sapiens chromosome 15, clone RP11-759A24, complete sequence Length = 182943 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 226 aaggatccatcttcatctcttctc 249 |||||||||| ||||||||||||| Sbjct: 143740 aaggatccattttcatctcttctc 143717
>gb|AC063933.13| Homo sapiens 3 BAC RP11-566A3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 168380 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 343 acagcagtagcagcagcaat 362 |||||||||||||||||||| Sbjct: 22946 acagcagtagcagcagcaat 22965
>gb|AC093425.2| Homo sapiens chromosome 1 clone RP11-470E16, complete sequence Length = 179499 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 gtaacacagtaaatagatga 37 |||||||||||||||||||| Sbjct: 103971 gtaacacagtaaatagatga 103990
>gb|AC008883.6| Homo sapiens chromosome 5 clone CTD-2215E18, complete sequence Length = 127144 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 acacagtaaatagatgaata 40 |||||||||||||||||||| Sbjct: 64856 acacagtaaatagatgaata 64875
>gb|AC107315.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0032O19, from chromosome 3, complete sequence Length = 142248 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 432 atctcatctcatctcatctg 451 |||||||||||||||||||| Sbjct: 84577 atctcatctcatctcatctg 84596
>gb|AC012409.9| Homo sapiens chromosome 15, clone RP11-327J17, complete sequence Length = 183014 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 226 aaggatccatcttcatctcttctc 249 |||||||||| ||||||||||||| Sbjct: 73392 aaggatccattttcatctcttctc 73369
>gb|AC018490.6| Drosophila melanogaster, chromosome X, region 17E-17F, BAC clone BACR25O02, complete sequence Length = 165098 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 342 cacagcagtagcagcagcaa 361 |||||||||||||||||||| Sbjct: 71168 cacagcagtagcagcagcaa 71149
>gb|AC158239.2| Mus musculus BAC clone RP23-48A24 from chromosome 10, complete sequence Length = 256496 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 432 atctcatctcatctcatctg 451 |||||||||||||||||||| Sbjct: 156339 atctcatctcatctcatctg 156320
>gb|AC134466.4| Mus musculus BAC clone RP23-463E4 from chromosome 1, complete sequence Length = 183104 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 432 atctcatctcatctcatctg 451 |||||||||||||||||||| Sbjct: 69316 atctcatctcatctcatctg 69335
>gb|AC156637.2| Mus musculus BAC clone RP24-241I18 from chromosome 12, complete sequence Length = 156014 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 tccatcttcatctcttctct 250 |||||||||||||||||||| Sbjct: 66165 tccatcttcatctcttctct 66146
>gb|AC157516.2| Mus musculus BAC clone RP24-279F18 from chromosome 9, complete sequence Length = 175493 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 432 atctcatctcatctcatctgatcc 455 ||||||||||||||||||| |||| Sbjct: 2675 atctcatctcatctcatctcatcc 2652
>gb|AC005406.2| Homo sapiens clone b128f11, complete sequence Length = 226345 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 432 atctcatctcatctcatctg 451 |||||||||||||||||||| Sbjct: 212235 atctcatctcatctcatctg 212254
>emb|BX510931.8| Zebrafish DNA sequence from clone CH211-132M19 in linkage group 21, complete sequence Length = 181237 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 431 gatctcatctcatctcatct 450 |||||||||||||||||||| Sbjct: 91133 gatctcatctcatctcatct 91114
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 431 gatctcatctcatctcatct 450 |||||||||||||||||||| Sbjct: 17577220 gatctcatctcatctcatct 17577201
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 432 atctcatctcatctcatctg 451 |||||||||||||||||||| Sbjct: 17458553 atctcatctcatctcatctg 17458534
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 432 atctcatctcatctcatctg 451 |||||||||||||||||||| Sbjct: 9199647 atctcatctcatctcatctg 9199628
>gb|AC079176.15| Homo sapiens X BAC RP11-325D5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 186278 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 tccatcttcatctcttctct 250 |||||||||||||||||||| Sbjct: 20251 tccatcttcatctcttctct 20232
>emb|BX823622.1|CNS0A7FQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS58ZF04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1486 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 catcttcatctcttctctaa 252 |||||||||||||||||||| Sbjct: 1234 catcttcatctcttctctaa 1253
>emb|BX822671.1|CNS0A789 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB57ZE05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1543 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 catcttcatctcttctctaa 252 |||||||||||||||||||| Sbjct: 1294 catcttcatctcttctctaa 1313
>emb|BX822115.1|CNS0A78R Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB14ZA02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1462 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 catcttcatctcttctctaa 252 |||||||||||||||||||| Sbjct: 1215 catcttcatctcttctctaa 1234
>emb|BX822797.1|CNS0A724 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB64ZE11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1486 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 catcttcatctcttctctaa 252 |||||||||||||||||||| Sbjct: 1233 catcttcatctcttctctaa 1252
>emb|BX826053.1|CNS0A6E0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL81ZE01 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1523 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 catcttcatctcttctctaa 252 |||||||||||||||||||| Sbjct: 1291 catcttcatctcttctctaa 1310
>emb|BX825945.1|CNS0A69U Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL74ZG12 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1409 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 catcttcatctcttctctaa 252 |||||||||||||||||||| Sbjct: 1240 catcttcatctcttctctaa 1259
>gb|AC008195.6|AC008195 Drosophila melanogaster, chromosome 3R, region 93F-93F, BAC clone BACR42I20, complete sequence Length = 164944 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 431 gatctcatctcatctcatct 450 |||||||||||||||||||| Sbjct: 38637 gatctcatctcatctcatct 38656
>gb|AC008215.5|AC008215 Drosophila melanogaster, chromosome 3R, region 97C-97C, BAC clone BACR08N03, complete sequence Length = 165439 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 338 caggcacagcagtagcagca 357 |||||||||||||||||||| Sbjct: 254 caggcacagcagtagcagca 235
>gb|AC008214.4|AC008214 Drosophila melanogaster, chromosome 3R, region 97B-97C, BAC clone BACR13P17, complete sequence Length = 170403 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 338 caggcacagcagtagcagca 357 |||||||||||||||||||| Sbjct: 86800 caggcacagcagtagcagca 86781
>gb|AC010598.6| Homo sapiens chromosome 5 clone CTC-560O9, complete sequence Length = 174551 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 432 atctcatctcatctcatctg 451 |||||||||||||||||||| Sbjct: 51692 atctcatctcatctcatctg 51711
>gb|AC037425.7|AC037425 Oryza sativa chromosome 10 BAC OSJNBa0055P24 genomic sequence, complete sequence Length = 134058 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 432 atctcatctcatctcatctg 451 |||||||||||||||||||| Sbjct: 87548 atctcatctcatctcatctg 87529
>gb|AC026329.14| Homo sapiens 3 BAC RP11-325J6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 117404 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 ctccattctcttcctgtata 209 |||||||||||||||||||| Sbjct: 113560 ctccattctcttcctgtata 113541
>gb|AC164654.3| Gallus gallus BAC clone CH261-5H7 from chromosome unknown, complete sequence Length = 250515 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 271 tttgaccaataatatgatca 290 |||||||||||||||||||| Sbjct: 101558 tttgaccaataatatgatca 101539
>dbj|AP004775.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0451A10 Length = 137046 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 433 tctcatctcatctcatctgatccg 456 ||||||| |||||||||||||||| Sbjct: 97410 tctcatcccatctcatctgatccg 97433
>emb|AL671400.5| Mouse DNA sequence from clone RP23-109C6 on chromosome X, complete sequence Length = 188391 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 432 atctcatctcatctcatctg 451 |||||||||||||||||||| Sbjct: 181236 atctcatctcatctcatctg 181255
>gb|AC133197.3| Mus musculus BAC clone RP23-228E15 from 8, complete sequence Length = 197899 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 155 aacattattccatcaactagaata 178 |||||| ||||||||||||||||| Sbjct: 39135 aacattcttccatcaactagaata 39112
>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome Length = 4791961 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 421 taaaagtgacgatctcatct 440 |||||||||||||||||||| Sbjct: 62534 taaaagtgacgatctcatct 62553
>emb|Z74111.1|SCYDL063C S.cerevisiae chromosome IV reading frame ORF YDL063c Length = 2557 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 432 atctcatctcatctcatctgatcc 455 ||||||||||||||||||| |||| Sbjct: 2238 atctcatctcatctcatctcatcc 2215
>emb|Z74109.1|SCYDL061C S.cerevisiae chromosome IV reading frame ORF YDL061c Length = 1617 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 432 atctcatctcatctcatctgatcc 455 ||||||||||||||||||| |||| Sbjct: 307 atctcatctcatctcatctcatcc 284
>gb|AE003757.2| Drosophila melanogaster chromosome 3R, section 95 of 118 of the complete sequence Length = 191834 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 338 caggcacagcagtagcagca 357 |||||||||||||||||||| Sbjct: 8785 caggcacagcagtagcagca 8766
>gb|AE003736.3| Drosophila melanogaster chromosome 3R, section 74 of 118 of the complete sequence Length = 235928 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 431 gatctcatctcatctcatct 450 |||||||||||||||||||| Sbjct: 64645 gatctcatctcatctcatct 64664
>gb|AE003535.3| Drosophila melanogaster chromosome 3L, section 50 of 83 of the complete sequence Length = 278708 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 431 gatctcatctcatctcatctgatc 454 ||||||||||||||| |||||||| Sbjct: 101618 gatctcatctcatctaatctgatc 101641
>gb|AE003510.5| Drosophila melanogaster chromosome X, section 62 of 74 of the complete sequence Length = 297236 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 342 cacagcagtagcagcagcaa 361 |||||||||||||||||||| Sbjct: 106395 cacagcagtagcagcagcaa 106376
>gb|AE003438.3| Drosophila melanogaster chromosome X, section 22 of 74 of the complete sequence Length = 299943 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 432 atctcatctcatctcatctg 451 |||||||||||||||||||| Sbjct: 70724 atctcatctcatctcatctg 70705
>gb|AE003434.4| Drosophila melanogaster chromosome X, section 18 of 74 of the complete sequence Length = 303928 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 337 acaggcacagcagtagcagcagca 360 ||||||||||||| |||||||||| Sbjct: 165148 acaggcacagcagcagcagcagca 165125
>gb|AC131987.10| Mus musculus chromosome 13, clone RP24-184L10, complete sequence Length = 174529 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 432 atctcatctcatctcatctgatcc 455 ||||||||||||||||||| |||| Sbjct: 166598 atctcatctcatctcatctcatcc 166621
>gb|AC087416.18| Mus musculus strain C57BL/6J chromosome 2 clone rp23-224l16, complete sequence Length = 183349 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 431 gatctcatctcatctcatct 450 |||||||||||||||||||| Sbjct: 8491 gatctcatctcatctcatct 8472
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 432 atctcatctcatctcatctg 451 |||||||||||||||||||| Sbjct: 17467593 atctcatctcatctcatctg 17467574
>gb|AF085905.1|HUMYQ54B06 Homo sapiens full length insert cDNA clone YQ54B06 Length = 456 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 tccatcttcatctcttctct 250 |||||||||||||||||||| Sbjct: 176 tccatcttcatctcttctct 157
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 431 gatctcatctcatctcatct 450 |||||||||||||||||||| Sbjct: 17531591 gatctcatctcatctcatct 17531572
>emb|AL935066.2|CNS08CCI Oryza sativa chromosome 12, . BAC OSJNBa0005P03 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 162200 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 431 gatctcatctcatctcatct 450 |||||||||||||||||||| Sbjct: 69556 gatctcatctcatctcatct 69537
>gb|CP000220.1| Drosophila melanogaster genomic scaffold 211000022280793 Length = 328417 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 gcacagcagtagcagcagca 360 |||||||||||||||||||| Sbjct: 14624 gcacagcagtagcagcagca 14643
>gb|CP000206.1| Drosophila melanogaster genomic scaffold 211000022280664 Length = 169021 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 341 gcacagcagtagcagcagca 360 |||||||||||||||||||| Sbjct: 168696 gcacagcagtagcagcagca 168677 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 341 gcacagcagtagcagcagca 360 |||||||||||||||||||| Sbjct: 161061 gcacagcagtagcagcagca 161042 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 341 gcacagcagtagcagcagca 360 |||||||||||||||||||| Sbjct: 157241 gcacagcagtagcagcagca 157222
>gb|AC140787.4| Mus musculus BAC clone RP23-411H17 from 10, complete sequence Length = 217336 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 432 atctcatctcatctcatctg 451 |||||||||||||||||||| Sbjct: 216242 atctcatctcatctcatctg 216223
>emb|AL954183.5| Zebrafish DNA sequence from clone DKEY-38M20, complete sequence Length = 152323 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 436 catctcatctcatctgatcc 455 |||||||||||||||||||| Sbjct: 121222 catctcatctcatctgatcc 121241
>gb|AC090121.37| Mus musculus strain C57BL/6J chromosome 16 clone rp23-141k23, complete sequence Length = 188804 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 337 acaggcacagcagtagcagcagca 360 |||| ||||||||||||||||||| Sbjct: 99029 acagccacagcagtagcagcagca 99052
>dbj|AP006084.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT44D21, TM0127b, complete sequence Length = 95169 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 432 atctcatctcatctcatctgatcc 455 ||||||||||||||||||| |||| Sbjct: 20944 atctcatctcatctcatctcatcc 20967
>gb|AC155302.2| Mus musculus BAC clone RP24-227A11 from chromosome 13, complete sequence Length = 152447 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 432 atctcatctcatctcatctgatcc 455 ||||||||||||||||||| |||| Sbjct: 23899 atctcatctcatctcatctcatcc 23922
>gb|DQ273796.1| Kuzuhaea moniliformis isolate AFTOL-ID 143 28S ribosomal RNA gene, partial sequence Length = 3334 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 acattattccatcaactaga 175 |||||||||||||||||||| Sbjct: 2138 acattattccatcaactaga 2119
>gb|AC144455.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0086G17, complete sequence Length = 134631 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 432 atctcatctcatctcatctg 451 |||||||||||||||||||| Sbjct: 58031 atctcatctcatctcatctg 58012
>emb|AL805918.5| Mouse DNA sequence from clone RP23-191L7 on chromosome 2, complete sequence Length = 213625 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 431 gatctcatctcatctcatct 450 |||||||||||||||||||| Sbjct: 48168 gatctcatctcatctcatct 48149
>gb|AC137619.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0095J22, complete sequence Length = 151730 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 437 atctcatctcatctgatccg 456 |||||||||||||||||||| Sbjct: 19926 atctcatctcatctgatccg 19945
>gb|AC148985.4| Mus musculus BAC clone RP23-124O21 from chromosome 7, complete sequence Length = 190473 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 436 catctcatctcatctgatcc 455 |||||||||||||||||||| Sbjct: 175285 catctcatctcatctgatcc 175304
>gb|AC164552.4| Mus musculus BAC clone RP23-352M7 from chromosome 9, complete sequence Length = 169465 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 432 atctcatctcatctcatctgatcc 455 ||||||||||||||||||| |||| Sbjct: 110621 atctcatctcatctcatctcatcc 110598
>dbj|AB018509.1| Homo sapiens DNA, trinucleotide repeats region, clone CAG-TAG1 Length = 571 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 343 acagcagtagcagcagcaat 362 |||||||||||||||||||| Sbjct: 139 acagcagtagcagcagcaat 158
>dbj|AP005262.3| Homo sapiens genomic DNA, chromosome 18 clone:CTD-2533G20, complete sequence Length = 113000 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 432 atctcatctcatctcatctg 451 |||||||||||||||||||| Sbjct: 100657 atctcatctcatctcatctg 100676 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,441,038 Number of Sequences: 3902068 Number of extensions: 4441038 Number of successful extensions: 119273 Number of sequences better than 10.0: 148 Number of HSP's better than 10.0 without gapping: 153 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 117718 Number of HSP's gapped (non-prelim): 1478 length of query: 618 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 595 effective length of database: 17,143,297,704 effective search space: 10200262133880 effective search space used: 10200262133880 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
