ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal1k24
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 260 4e-66
2dbj|AP001800.2| Oryza sativa (japonica cultivar-group) genomic D... 260 4e-66
3dbj|AP002094.1| Oryza sativa (japonica cultivar-group) genomic D... 260 4e-66
4dbj|AK063996.1| Oryza sativa (japonica cultivar-group) cDNA clon... 260 4e-66
5ref|NM_188507.1| Oryza sativa (japonica cultivar-group), Ozsa817... 190 3e-45
6ref|XM_507080.1| PREDICTED Oryza sativa (japonica cultivar-group... 48 0.029
7gb|AC108498.2| Oryza sativa (japonica cultivar-group) chromosome... 48 0.029
8dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.029
9dbj|AK066642.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.029
10ref|XM_473869.1| Oryza sativa (japonica cultivar-group), predic... 46 0.12
11gb|AC091463.9| Mus musculus chromosome 16, clone RP23-301D7, com... 46 0.12
12gb|AC132349.3| Mus musculus BAC clone RP24-82B7 from chromosome ... 46 0.12
13emb|AL731610.4|OSJN00255 Oryza sativa genomic DNA, chromosome 4,... 46 0.12
14dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.12
15dbj|AK065653.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.12
16gb|AC154300.2| Mus musculus BAC clone RP23-390F4 from 12, comple... 46 0.12
17emb|CR555290.8| Zebrafish DNA sequence from clone DKEYP-10A10 in... 44 0.45
18gb|AY107152.1| Zea mays PCO111123 mRNA sequence 44 0.45
19gb|AC104862.15| Mus musculus chromosome 15, clone RP23-124I9, co... 42 1.8
20gb|AC120787.14| Mus musculus chromosome 15, clone RP24-180L12, c... 42 1.8
21gb|AF306785.1|AF306785 Mus musculus type II keratin 5 (K5) gene,... 42 1.8
22gb|AC008250.23| Homo sapiens 12 BAC RP11-729I10 (Roswell Park Ca... 42 1.8
23gb|AC068630.21| Homo sapiens 3 BAC RP11-289N10 (Roswell Park Can... 42 1.8
24emb|AL929311.8| Mouse DNA sequence from clone RP23-291N2 on chro... 42 1.8
25ref|NM_015124.2| Homo sapiens death-inducing-protein (DIP), mRNA 40 7.1
26gb|DP000013.1| Otolemur garnettii target 1 genomic scaffold 40 7.1
27gb|AC053466.6| Homo sapiens chromosome 10 clone RP11-491G3, comp... 40 7.1
28gb|AC138580.19| Medicago truncatula clone mth2-14e15, complete s... 40 7.1
29gb|AC159882.2| Mus musculus BAC clone RP24-480A4 from chromosome... 40 7.1
30emb|CR388093.11| Zebrafish DNA sequence from clone CH211-279L9 i... 40 7.1
31gb|AC091549.11| Homo sapiens chromosome 8, clone RP11-343D20, co... 40 7.1
32gb|AC068185.9| Homo sapiens chromosome 11, clone RP11-330I10, co... 40 7.1
33gb|AC087713.4| Homo sapiens chromosome 8, clone RP11-731D15, com... 40 7.1
34gb|AC009866.6| Homo sapiens chromosome 11, clone RP11-61E7, comp... 40 7.1
35gb|BC080189.1| Homo sapiens death-inducing-protein, mRNA (cDNA c... 40 7.1
36gb|AC017037.10|AC017037 Homo sapiens BAC clone RP11-312A15 from ... 40 7.1
37dbj|AB018310.2| Homo sapiens mRNA for KIAA0767 protein, partial cds 40 7.1
38gb|AC146534.3| Otolemur garnettii clone CH256-50E17, complete se... 40 7.1
39emb|CR456470.1| Homo sapiens dJ439F8.1 full length open reading ... 40 7.1 
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  260 bits (131), Expect = 4e-66
 Identities = 260/303 (85%)
 Strand = Plus / Minus

                                                                           
Query: 223     gctcaaagattgagatgaagcctcgaagtaagttggttttggagttgttgggcagctaag 282
               |||||||||||||||||||| ||| || ||||||||||| || || |  ||||||| |||
Sbjct: 6654062 gctcaaagattgagatgaagtctcaaaataagttggtttcggtgtggaggggcagccaag 6654003

                                                                           
Query: 283     tgatctgactagctcttgaacagacaggaccttgtactttgtaggtgggttcgtagcaat 342
                ||||||| |||||| || || | |||||||||| ||||||| ||||| ||| |||||| 
Sbjct: 6654002 cgatctgattagctcgtggactggcaggaccttgaactttgttggtggattcatagcaac 6653943

                                                                           
Query: 343     gttatgtaccttgtgctcatagatcttcccgttcctgtcgagtttgtacacggaggcgcc 402
                || || ||||| ||||| ||||||||||| ||| |||||||||| ||| | || || ||
Sbjct: 6653942 attgtgcaccttatgctcgtagatcttcccattcttgtcgagtttatactcagaagcacc 6653883

                                                                           
Query: 403     gtcaaagcgggcatgaccatcccatgggaccctaggaataccatgggcaatccagcgaat 462
                ||||||||  ||||  | ||||||||||| | |||||| ||||||||||||||||||||
Sbjct: 6653882 atcaaagcgaccatgggcctcccatgggactcgaggaatgccatgggcaatccagcgaat 6653823

                                                                           
Query: 463     cataataagattctcagcaggctgccatatactaactatatcaacccataatgctttgaa 522
               ||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 6653822 catgataagattctcagcaggctgccatatactaactatatcaacccatagtgctttgaa 6653763

                  
Query: 523     gaa 525
               |||
Sbjct: 6653762 gaa 6653760



 Score = 44.1 bits (22), Expect = 0.45
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                     
Query: 133     ctatccttctctgagatttgctagagaaagcatatggc 170
               |||||||||||  ||||||| ||| |||||||||||||
Sbjct: 6654152 ctatccttctcccagatttggtagcgaaagcatatggc 6654115
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>dbj|AP001800.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0443E05
          Length = 176935

 Score =  260 bits (131), Expect = 4e-66
 Identities = 260/303 (85%)
 Strand = Plus / Minus

                                                                        
Query: 223  gctcaaagattgagatgaagcctcgaagtaagttggttttggagttgttgggcagctaag 282
            |||||||||||||||||||| ||| || ||||||||||| || || |  ||||||| |||
Sbjct: 6214 gctcaaagattgagatgaagtctcaaaataagttggtttcggtgtggaggggcagccaag 6155

                                                                        
Query: 283  tgatctgactagctcttgaacagacaggaccttgtactttgtaggtgggttcgtagcaat 342
             ||||||| |||||| || || | |||||||||| ||||||| ||||| ||| |||||| 
Sbjct: 6154 cgatctgattagctcgtggactggcaggaccttgaactttgttggtggattcatagcaac 6095

                                                                        
Query: 343  gttatgtaccttgtgctcatagatcttcccgttcctgtcgagtttgtacacggaggcgcc 402
             || || ||||| ||||| ||||||||||| ||| |||||||||| ||| | || || ||
Sbjct: 6094 attgtgcaccttatgctcgtagatcttcccattcttgtcgagtttatactcagaagcacc 6035

                                                                        
Query: 403  gtcaaagcgggcatgaccatcccatgggaccctaggaataccatgggcaatccagcgaat 462
             ||||||||  ||||  | ||||||||||| | |||||| ||||||||||||||||||||
Sbjct: 6034 atcaaagcgaccatgggcctcccatgggactcgaggaatgccatgggcaatccagcgaat 5975

                                                                        
Query: 463  cataataagattctcagcaggctgccatatactaactatatcaacccataatgctttgaa 522
            ||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 5974 catgataagattctcagcaggctgccatatactaactatatcaacccatagtgctttgaa 5915

               
Query: 523  gaa 525
            |||
Sbjct: 5914 gaa 5912



 Score = 44.1 bits (22), Expect = 0.45
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 133  ctatccttctctgagatttgctagagaaagcatatggc 170
            |||||||||||  ||||||| ||| |||||||||||||
Sbjct: 6304 ctatccttctcccagatttggtagcgaaagcatatggc 6267
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>dbj|AP002094.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0483F08
          Length = 148985

 Score =  260 bits (131), Expect = 4e-66
 Identities = 260/303 (85%)
 Strand = Plus / Minus

                                                                          
Query: 223    gctcaaagattgagatgaagcctcgaagtaagttggttttggagttgttgggcagctaag 282
              |||||||||||||||||||| ||| || ||||||||||| || || |  ||||||| |||
Sbjct: 134233 gctcaaagattgagatgaagtctcaaaataagttggtttcggtgtggaggggcagccaag 134174

                                                                          
Query: 283    tgatctgactagctcttgaacagacaggaccttgtactttgtaggtgggttcgtagcaat 342
               ||||||| |||||| || || | |||||||||| ||||||| ||||| ||| |||||| 
Sbjct: 134173 cgatctgattagctcgtggactggcaggaccttgaactttgttggtggattcatagcaac 134114

                                                                          
Query: 343    gttatgtaccttgtgctcatagatcttcccgttcctgtcgagtttgtacacggaggcgcc 402
               || || ||||| ||||| ||||||||||| ||| |||||||||| ||| | || || ||
Sbjct: 134113 attgtgcaccttatgctcgtagatcttcccattcttgtcgagtttatactcagaagcacc 134054

                                                                          
Query: 403    gtcaaagcgggcatgaccatcccatgggaccctaggaataccatgggcaatccagcgaat 462
               ||||||||  ||||  | ||||||||||| | |||||| ||||||||||||||||||||
Sbjct: 134053 atcaaagcgaccatgggcctcccatgggactcgaggaatgccatgggcaatccagcgaat 133994

                                                                          
Query: 463    cataataagattctcagcaggctgccatatactaactatatcaacccataatgctttgaa 522
              ||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 133993 catgataagattctcagcaggctgccatatactaactatatcaacccatagtgctttgaa 133934

                 
Query: 523    gaa 525
              |||
Sbjct: 133933 gaa 133931



 Score = 44.1 bits (22), Expect = 0.45
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                    
Query: 133    ctatccttctctgagatttgctagagaaagcatatggc 170
              |||||||||||  ||||||| ||| |||||||||||||
Sbjct: 134323 ctatccttctcccagatttggtagcgaaagcatatggc 134286
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>dbj|AK063996.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-E12, full
            insert sequence
          Length = 2143

 Score =  260 bits (131), Expect = 4e-66
 Identities = 260/303 (85%)
 Strand = Plus / Minus

                                                                        
Query: 223  gctcaaagattgagatgaagcctcgaagtaagttggttttggagttgttgggcagctaag 282
            |||||||||||||||||||| ||| || ||||||||||| || || |  ||||||| |||
Sbjct: 1915 gctcaaagattgagatgaagtctcaaaataagttggtttcggtgtggaggggcagccaag 1856

                                                                        
Query: 283  tgatctgactagctcttgaacagacaggaccttgtactttgtaggtgggttcgtagcaat 342
             ||||||| |||||| || || | |||||||||| ||||||| ||||| ||| |||||| 
Sbjct: 1855 cgatctgattagctcgtggactggcaggaccttgaactttgttggtggattcatagcaac 1796

                                                                        
Query: 343  gttatgtaccttgtgctcatagatcttcccgttcctgtcgagtttgtacacggaggcgcc 402
             || || ||||| ||||| ||||||||||| ||| |||||||||| ||| | || || ||
Sbjct: 1795 attgtgcaccttatgctcgtagatcttcccattcttgtcgagtttatactcagaagcacc 1736

                                                                        
Query: 403  gtcaaagcgggcatgaccatcccatgggaccctaggaataccatgggcaatccagcgaat 462
             ||||||||  ||||  | ||||||||||| | |||||| ||||||||||||||||||||
Sbjct: 1735 atcaaagcgaccatgggcctcccatgggactcgaggaatgccatgggcaatccagcgaat 1676

                                                                        
Query: 463  cataataagattctcagcaggctgccatatactaactatatcaacccataatgctttgaa 522
            ||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1675 catgataagattctcagcaggctgccatatactaactatatcaacccatagtgctttgaa 1616

               
Query: 523  gaa 525
            |||
Sbjct: 1615 gaa 1613



 Score = 44.1 bits (22), Expect = 0.45
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 133  ctatccttctctgagatttgctagagaaagcatatggc 170
            |||||||||||  ||||||| ||| |||||||||||||
Sbjct: 2005 ctatccttctcccagatttggtagcgaaagcatatggc 1968
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>ref|NM_188507.1| Oryza sativa (japonica cultivar-group), Ozsa8176 predicted mRNA
          Length = 717

 Score =  190 bits (96), Expect = 3e-45
 Identities = 156/176 (88%)
 Strand = Plus / Minus

                                                                       
Query: 350 accttgtgctcatagatcttcccgttcctgtcgagtttgtacacggaggcgccgtcaaag 409
           ||||| ||||| ||||||||||| ||| |||||||||| ||| | || || || ||||||
Sbjct: 638 accttatgctcgtagatcttcccattcttgtcgagtttatactcagaagcaccatcaaag 579

                                                                       
Query: 410 cgggcatgaccatcccatgggaccctaggaataccatgggcaatccagcgaatcataata 469
           ||  ||||  | ||||||||||| | |||||| ||||||||||||||||||||||| |||
Sbjct: 578 cgaccatgggcctcccatgggactcgaggaatgccatgggcaatccagcgaatcatgata 519

                                                                   
Query: 470 agattctcagcaggctgccatatactaactatatcaacccataatgctttgaagaa 525
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 518 agattctcagcaggctgccatatactaactatatcaacccatagtgctttgaagaa 463
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>ref|XM_507080.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1076_H08.5 mRNA
          Length = 903

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 210/272 (77%)
 Strand = Plus / Minus

                                                                       
Query: 254 gttggttttggagttgttgggcagctaagtgatctgactagctcttgaacagacaggacc 313
           |||||||||||||| | |||||| | |||||||||||  ||||||   || | || ||||
Sbjct: 785 gttggttttggagtagatgggcatccaagtgatctgatgagctctacgactggcaagacc 726

                                                                       
Query: 314 ttgtactttgtaggtgggttcgtagcaatgttatgtaccttgtgctcatagatcttcccg 373
           ||  | || || |||| |||| | ||||  ||||  ||||| ||||||||||||||||| 
Sbjct: 725 ttaaatttcgttggtgtgttcttggcaacattatcaaccttatgctcatagatcttccca 666

                                                                       
Query: 374 ttcctgtcgagtttgtacacggaggcgccgtcaaagcgggcatgaccatcccatgggacc 433
           ||| |||| |  || ||| | |||| ||| ||||| | | || | |||||| |  | || 
Sbjct: 665 ttcttgtcaaacttatactctgaggtgccttcaaatctgccagggccatccgagagaact 606

                                                                       
Query: 434 ctaggaataccatgggcaatccagcgaatcataataagattctcagcaggctgccatata 493
           |||||||| |||||| |||||||||| ||||| || | || |||  ||||||||||||| 
Sbjct: 605 ctaggaatgccatggacaatccagcggatcatgattacatcctcgacaggctgccatatg 546

                                           
Query: 494 ctaactatatcaacccataatgctttgaagaa 525
           || |  || || | ||||| ||||||||||||
Sbjct: 545 ctgataatgtcgatccatagtgctttgaagaa 514
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>gb|AC108498.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1076_H08,
             complete sequence
          Length = 148348

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 210/272 (77%)
 Strand = Plus / Minus

                                                                         
Query: 254   gttggttttggagttgttgggcagctaagtgatctgactagctcttgaacagacaggacc 313
             |||||||||||||| | |||||| | |||||||||||  ||||||   || | || ||||
Sbjct: 37673 gttggttttggagtagatgggcatccaagtgatctgatgagctctacgactggcaagacc 37614

                                                                         
Query: 314   ttgtactttgtaggtgggttcgtagcaatgttatgtaccttgtgctcatagatcttcccg 373
             ||  | || || |||| |||| | ||||  ||||  ||||| ||||||||||||||||| 
Sbjct: 37613 ttaaatttcgttggtgtgttcttggcaacattatcaaccttatgctcatagatcttccca 37554

                                                                         
Query: 374   ttcctgtcgagtttgtacacggaggcgccgtcaaagcgggcatgaccatcccatgggacc 433
             ||| |||| |  || ||| | |||| ||| ||||| | | || | |||||| |  | || 
Sbjct: 37553 ttcttgtcaaacttatactctgaggtgccttcaaatctgccagggccatccgagagaact 37494

                                                                         
Query: 434   ctaggaataccatgggcaatccagcgaatcataataagattctcagcaggctgccatata 493
             |||||||| |||||| |||||||||| ||||| || | || |||  ||||||||||||| 
Sbjct: 37493 ctaggaatgccatggacaatccagcggatcatgattacatcctcgacaggctgccatatg 37434

                                             
Query: 494   ctaactatatcaacccataatgctttgaagaa 525
             || |  || || | ||||| ||||||||||||
Sbjct: 37433 ctgataatgtcgatccatagtgctttgaagaa 37402
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 210/272 (77%)
 Strand = Plus / Minus

                                                                           
Query: 254     gttggttttggagttgttgggcagctaagtgatctgactagctcttgaacagacaggacc 313
               |||||||||||||| | |||||| | |||||||||||  ||||||   || | || ||||
Sbjct: 7082824 gttggttttggagtagatgggcatccaagtgatctgatgagctctacgactggcaagacc 7082765

                                                                           
Query: 314     ttgtactttgtaggtgggttcgtagcaatgttatgtaccttgtgctcatagatcttcccg 373
               ||  | || || |||| |||| | ||||  ||||  ||||| ||||||||||||||||| 
Sbjct: 7082764 ttaaatttcgttggtgtgttcttggcaacattatcaaccttatgctcatagatcttccca 7082705

                                                                           
Query: 374     ttcctgtcgagtttgtacacggaggcgccgtcaaagcgggcatgaccatcccatgggacc 433
               ||| |||| |  || ||| | |||| ||| ||||| | | || | |||||| |  | || 
Sbjct: 7082704 ttcttgtcaaacttatactctgaggtgccttcaaatctgccagggccatccgagagaact 7082645

                                                                           
Query: 434     ctaggaataccatgggcaatccagcgaatcataataagattctcagcaggctgccatata 493
               |||||||| |||||| |||||||||| ||||| || | || |||  ||||||||||||| 
Sbjct: 7082644 ctaggaatgccatggacaatccagcggatcatgattacatcctcgacaggctgccatatg 7082585

                                               
Query: 494     ctaactatatcaacccataatgctttgaagaa 525
               || |  || || | ||||| ||||||||||||
Sbjct: 7082584 ctgataatgtcgatccatagtgctttgaagaa 7082553
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>dbj|AK066642.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013073I22, full
           insert sequence
          Length = 1331

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 210/272 (77%)
 Strand = Plus / Minus

                                                                       
Query: 254 gttggttttggagttgttgggcagctaagtgatctgactagctcttgaacagacaggacc 313
           |||||||||||||| | |||||| | |||||||||||  ||||||   || | || ||||
Sbjct: 900 gttggttttggagtagatgggcatccaagtgatctgatgagctctacgactggcaagacc 841

                                                                       
Query: 314 ttgtactttgtaggtgggttcgtagcaatgttatgtaccttgtgctcatagatcttcccg 373
           ||  | || || |||| |||| | ||||  ||||  ||||| ||||||||||||||||| 
Sbjct: 840 ttaaatttcgttggtgtgttcttggcaacattatcaaccttatgctcatagatcttccca 781

                                                                       
Query: 374 ttcctgtcgagtttgtacacggaggcgccgtcaaagcgggcatgaccatcccatgggacc 433
           ||| |||| |  || ||| | |||| ||| ||||| | | || | |||||| |  | || 
Sbjct: 780 ttcttgtcaaacttatactctgaggtgccttcaaatctgccagggccatccgagagaact 721

                                                                       
Query: 434 ctaggaataccatgggcaatccagcgaatcataataagattctcagcaggctgccatata 493
           |||||||| |||||| |||||||||| ||||| || | || |||  ||||||||||||| 
Sbjct: 720 ctaggaatgccatggacaatccagcggatcatgattacatcctcgacaggctgccatatg 661

                                           
Query: 494 ctaactatatcaacccataatgctttgaagaa 525
           || |  || || | ||||| ||||||||||||
Sbjct: 660 ctgataatgtcgatccatagtgctttgaagaa 629
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>ref|XM_473869.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 846

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 353 ttgtgctcatagatcttcccgttcctgtcga 383
           |||||||| || |||||||||||||||||||
Sbjct: 611 ttgtgctcgtaaatcttcccgttcctgtcga 581
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>gb|AC091463.9| Mus musculus chromosome 16, clone RP23-301D7, complete sequence
          Length = 232419

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 20     tgtctctgtacatatatacaaca 42
              |||||||||||||||||||||||
Sbjct: 197749 tgtctctgtacatatatacaaca 197771
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>gb|AC132349.3| Mus musculus BAC clone RP24-82B7 from chromosome 16, complete sequence
          Length = 216783

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 20     tgtctctgtacatatatacaaca 42
              |||||||||||||||||||||||
Sbjct: 174500 tgtctctgtacatatatacaaca 174478
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>emb|AL731610.4|OSJN00255 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070C17,
              complete sequence
          Length = 160484

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                             
Query: 353    ttgtgctcatagatcttcccgttcctgtcga 383
              |||||||| || |||||||||||||||||||
Sbjct: 112284 ttgtgctcgtaaatcttcccgttcctgtcga 112314
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                               
Query: 353      ttgtgctcatagatcttcccgttcctgtcga 383
                |||||||| || |||||||||||||||||||
Sbjct: 31130203 ttgtgctcgtaaatcttcccgttcctgtcga 31130233
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>dbj|AK065653.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013037F04, full
           insert sequence
          Length = 1295

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 353 ttgtgctcatagatcttcccgttcctgtcga 383
           |||||||| || |||||||||||||||||||
Sbjct: 814 ttgtgctcgtaaatcttcccgttcctgtcga 784
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>gb|AC154300.2| Mus musculus BAC clone RP23-390F4 from 12, complete sequence
          Length = 187014

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 299   tgaacagacaggaccttgtactt 321
             |||||||||||||||||||||||
Sbjct: 67641 tgaacagacaggaccttgtactt 67663
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>emb|CR555290.8| Zebrafish DNA sequence from clone DKEYP-10A10 in linkage group 10,
             complete sequence
          Length = 83568

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 501   tatcaacccataatgctttgaa 522
             ||||||||||||||||||||||
Sbjct: 41763 tatcaacccataatgctttgaa 41784
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>gb|AY107152.1| Zea mays PCO111123 mRNA sequence
          Length = 686

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 354 tgtgctcatagatcttcccgttcctgtcga 383
           ||||||| ||||| ||||||||||||||||
Sbjct: 262 tgtgctcgtagattttcccgttcctgtcga 233
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>gb|AC104862.15| Mus musculus chromosome 15, clone RP23-124I9, complete sequence
          Length = 168581

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 125  gacccacactatccttctctgagat 149
            |||||||||||||||| ||||||||
Sbjct: 4248 gacccacactatccttttctgagat 4272
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>gb|AC120787.14| Mus musculus chromosome 15, clone RP24-180L12, complete sequence
          Length = 156603

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 125  gacccacactatccttctctgagat 149
            |||||||||||||||| ||||||||
Sbjct: 1646 gacccacactatccttttctgagat 1622
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>gb|AF306785.1|AF306785 Mus musculus type II keratin 5 (K5) gene, complete cds
          Length = 10700

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 125  gacccacactatccttctctgagat 149
            |||||||||||||||| ||||||||
Sbjct: 6449 gacccacactatccttttctgagat 6425
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>gb|AC008250.23| Homo sapiens 12 BAC RP11-729I10 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 141132

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 248   aagtaagttggttttggagtt 268
             |||||||||||||||||||||
Sbjct: 82345 aagtaagttggttttggagtt 82325
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>gb|AC068630.21| Homo sapiens 3 BAC RP11-289N10 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 164161

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 259    ttttggagttgttgggcagct 279
              |||||||||||||||||||||
Sbjct: 141920 ttttggagttgttgggcagct 141940
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>emb|AL929311.8| Mouse DNA sequence from clone RP23-291N2 on chromosome 2, complete
            sequence
          Length = 103282

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 258  gttttggagttgttgggcagc 278
            |||||||||||||||||||||
Sbjct: 2661 gttttggagttgttgggcagc 2641
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>ref|NM_015124.2| Homo sapiens death-inducing-protein (DIP), mRNA
          Length = 4316

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 302  acagacaggaccttgtactt 321
            ||||||||||||||||||||
Sbjct: 1619 acagacaggaccttgtactt 1600
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>gb|DP000013.1| Otolemur garnettii target 1 genomic scaffold
          Length = 1743090

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 10     tgtataaatctgtctctgtacatatata 37
              |||||| |||||| ||||||||||||||
Sbjct: 206155 tgtatatatctgtatctgtacatatata 206182
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>gb|AC053466.6| Homo sapiens chromosome 10 clone RP11-491G3, complete sequence
          Length = 172885

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 39    aacagttatgattcaatact 58
             ||||||||||||||||||||
Sbjct: 26082 aacagttatgattcaatact 26063
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>gb|AC138580.19| Medicago truncatula clone mth2-14e15, complete sequence
          Length = 164457

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 82    tacaatacaacaaaaaaggt 101
             ||||||||||||||||||||
Sbjct: 10631 tacaatacaacaaaaaaggt 10650
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>gb|AC159882.2| Mus musculus BAC clone RP24-480A4 from chromosome 9, complete sequence
          Length = 178827

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 75    tggtaactacaatacaacaaaaaa 98
             ||||||||||||||||| ||||||
Sbjct: 36846 tggtaactacaatacaaaaaaaaa 36869
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>emb|CR388093.11| Zebrafish DNA sequence from clone CH211-279L9 in linkage group 2,
              complete sequence
          Length = 153673

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 142    tctgagatttgctagagaaa 161
              ||||||||||||||||||||
Sbjct: 129212 tctgagatttgctagagaaa 129231
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>gb|AC091549.11| Homo sapiens chromosome 8, clone RP11-343D20, complete sequence
          Length = 179187

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 129    cacactatccttctctgagatttg 152
              |||| |||||||||||||||||||
Sbjct: 136135 cacattatccttctctgagatttg 136158
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>gb|AC068185.9| Homo sapiens chromosome 11, clone RP11-330I10, complete sequence
          Length = 174189

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 39     aacagttatgattcaatact 58
              ||||||||||||||||||||
Sbjct: 137024 aacagttatgattcaatact 137043
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>gb|AC087713.4| Homo sapiens chromosome 8, clone RP11-731D15, complete sequence
          Length = 151348

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 129   cacactatccttctctgagatttg 152
             |||| |||||||||||||||||||
Sbjct: 33486 cacattatccttctctgagatttg 33509
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>gb|AC009866.6| Homo sapiens chromosome 11, clone RP11-61E7, complete sequence
          Length = 177564

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 39     aacagttatgattcaatact 58
              ||||||||||||||||||||
Sbjct: 138027 aacagttatgattcaatact 138008
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>gb|BC080189.1| Homo sapiens death-inducing-protein, mRNA (cDNA clone
           IMAGE:6013758), complete cds
          Length = 2843

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 302 acagacaggaccttgtactt 321
           ||||||||||||||||||||
Sbjct: 245 acagacaggaccttgtactt 226
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>gb|AC017037.10|AC017037 Homo sapiens BAC clone RP11-312A15 from 4, complete sequence
          Length = 186106

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 124  agacccacactatccttctc 143
            ||||||||||||||||||||
Sbjct: 4189 agacccacactatccttctc 4170
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>dbj|AB018310.2| Homo sapiens mRNA for KIAA0767 protein, partial cds
          Length = 4481

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 302  acagacaggaccttgtactt 321
            ||||||||||||||||||||
Sbjct: 1793 acagacaggaccttgtactt 1774
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>gb|AC146534.3| Otolemur garnettii clone CH256-50E17, complete sequence
          Length = 139631

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 10    tgtataaatctgtctctgtacatatata 37
             |||||| |||||| ||||||||||||||
Sbjct: 16649 tgtatatatctgtatctgtacatatata 16676
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>emb|CR456470.1| Homo sapiens dJ439F8.1 full length open reading frame (ORF) cDNA
            clone (cDNA clone C22ORF:pGEM.dJ439F8.1)
          Length = 1909

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 302  acagacaggaccttgtactt 321
            ||||||||||||||||||||
Sbjct: 1619 acagacaggaccttgtactt 1600


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,393,177
Number of Sequences: 3902068
Number of extensions: 4393177
Number of successful extensions: 78816
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 78670
Number of HSP's gapped (non-prelim): 142
length of query: 525
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 502
effective length of database: 17,143,297,704
effective search space: 8605935447408
effective search space used: 8605935447408
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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