ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags29p03 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_188088.1| Oryza sativa (japonica cultivar-group), Ozsa8520 predicted mRNA Length = 336 Score = 343 bits (173), Expect = 3e-91 Identities = 272/305 (89%) Strand = Plus / Minus Query: 173 ttgatgatgtcggagtcaccagggtcaatgatgctcaagcagcagactcggaagtattta 232 |||||||| || ||||||||||| ||||| ||||| | |||||| || |||||||||||| Sbjct: 317 ttgatgatatccgagtcaccaggatcaataatgctgaggcagcaaacacggaagtattta 258 Query: 233 ccacaggcagttcccaaatcaacattgtttccatggtagtggtggacagtgaccttcgcc 292 |||||||| || |||| ||| ||||| ||||| ||| | |||||||| |||||||| ||| Sbjct: 257 ccacaggctgtccccagatcgacattatttccgtggaaatggtggacggtgaccttggcc 198 Query: 293 aacatagcatagtactcaatctcggacttgcgaagtggagggcagttattagcaaggatc 352 |||||||| ||||||||||| || ||||| ||||| || |||||||| |||| || |||| Sbjct: 197 aacatagcgtagtactcaatttctgacttccgaagaggtgggcagttgttagaaatgatc 138 Query: 353 actagctttgccttggagttcctgagggtcctgaggacggtcttgtagccgagcgtgtac 412 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 137 actagcttcgccttggagttcctgagggtcctgaggacggtcttgtagccgagcgtgtac 78 Query: 413 ttgccactcttcatgacaagctgcagcttgttgttgatgttgtccccggacttcttcgtc 472 ||||| |||||||| || ||||||||||||||||||||||||||| ||||||||||||| Sbjct: 77 ttgccgctcttcatcacgagctgcagcttgttgttgatgttgtccgtggacttcttcgtc 18 Query: 473 ttctt 477 ||||| Sbjct: 17 ttctt 13
>dbj|AK122128.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033132L17, full insert sequence Length = 569 Score = 343 bits (173), Expect = 3e-91 Identities = 272/305 (89%) Strand = Plus / Minus Query: 173 ttgatgatgtcggagtcaccagggtcaatgatgctcaagcagcagactcggaagtattta 232 |||||||| || ||||||||||| ||||| ||||| | |||||| || |||||||||||| Sbjct: 400 ttgatgatatccgagtcaccaggatcaataatgctgaggcagcaaacacggaagtattta 341 Query: 233 ccacaggcagttcccaaatcaacattgtttccatggtagtggtggacagtgaccttcgcc 292 |||||||| || |||| ||| ||||| ||||| ||| | |||||||| |||||||| ||| Sbjct: 340 ccacaggctgtccccagatcgacattatttccgtggaaatggtggacggtgaccttggcc 281 Query: 293 aacatagcatagtactcaatctcggacttgcgaagtggagggcagttattagcaaggatc 352 |||||||| ||||||||||| || ||||| ||||| || |||||||| |||| || |||| Sbjct: 280 aacatagcgtagtactcaatttctgacttccgaagaggtgggcagttgttagaaatgatc 221 Query: 353 actagctttgccttggagttcctgagggtcctgaggacggtcttgtagccgagcgtgtac 412 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 220 actagcttcgccttggagttcctgagggtcctgaggacggtcttgtagccgagcgtgtac 161 Query: 413 ttgccactcttcatgacaagctgcagcttgttgttgatgttgtccccggacttcttcgtc 472 ||||| |||||||| || ||||||||||||||||||||||||||| ||||||||||||| Sbjct: 160 ttgccgctcttcatcacgagctgcagcttgttgttgatgttgtccgtggacttcttcgtc 101 Query: 473 ttctt 477 ||||| Sbjct: 100 ttctt 96 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 67 agaccaaatcaagtccagcaagaactaca 95 ||||||||||||||||||||| ||||||| Sbjct: 504 agaccaaatcaagtccagcaacaactaca 476
>dbj|AK119715.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-157-F08, full insert sequence Length = 570 Score = 343 bits (173), Expect = 3e-91 Identities = 272/305 (89%) Strand = Plus / Minus Query: 173 ttgatgatgtcggagtcaccagggtcaatgatgctcaagcagcagactcggaagtattta 232 |||||||| || ||||||||||| ||||| ||||| | |||||| || |||||||||||| Sbjct: 400 ttgatgatatccgagtcaccaggatcaataatgctgaggcagcaaacacggaagtattta 341 Query: 233 ccacaggcagttcccaaatcaacattgtttccatggtagtggtggacagtgaccttcgcc 292 |||||||| || |||| ||| ||||| ||||| ||| | |||||||| |||||||| ||| Sbjct: 340 ccacaggctgtccccagatcgacattatttccgtggaaatggtggacggtgaccttggcc 281 Query: 293 aacatagcatagtactcaatctcggacttgcgaagtggagggcagttattagcaaggatc 352 |||||||| ||||||||||| || ||||| ||||| || |||||||| |||| || |||| Sbjct: 280 aacatagcgtagtactcaatttctgacttccgaagaggtgggcagttgttagaaatgatc 221 Query: 353 actagctttgccttggagttcctgagggtcctgaggacggtcttgtagccgagcgtgtac 412 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 220 actagcttcgccttggagttcctgagggtcctgaggacggtcttgtagccgagcgtgtac 161 Query: 413 ttgccactcttcatgacaagctgcagcttgttgttgatgttgtccccggacttcttcgtc 472 ||||| |||||||| || ||||||||||||||||||||||||||| ||||||||||||| Sbjct: 160 ttgccgctcttcatcacgagctgcagcttgttgttgatgttgtccgtggacttcttcgtc 101 Query: 473 ttctt 477 ||||| Sbjct: 100 ttctt 96 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 67 agaccaaatcaagtccagcaagaactaca 95 ||||||||||||||||||||| ||||||| Sbjct: 504 agaccaaatcaagtccagcaacaactaca 476
>dbj|AK058917.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-009-A11, full insert sequence Length = 630 Score = 343 bits (173), Expect = 3e-91 Identities = 272/305 (89%) Strand = Plus / Minus Query: 173 ttgatgatgtcggagtcaccagggtcaatgatgctcaagcagcagactcggaagtattta 232 |||||||| || ||||||||||| ||||| ||||| | |||||| || |||||||||||| Sbjct: 403 ttgatgatatccgagtcaccaggatcaataatgctgaggcagcaaacacggaagtattta 344 Query: 233 ccacaggcagttcccaaatcaacattgtttccatggtagtggtggacagtgaccttcgcc 292 |||||||| || |||| ||| ||||| ||||| ||| | |||||||| |||||||| ||| Sbjct: 343 ccacaggctgtccccagatcgacattatttccgtggaaatggtggacggtgaccttggcc 284 Query: 293 aacatagcatagtactcaatctcggacttgcgaagtggagggcagttattagcaaggatc 352 |||||||| ||||||||||| || ||||| ||||| || |||||||| |||| || |||| Sbjct: 283 aacatagcgtagtactcaatttctgacttccgaagaggtgggcagttgttagaaatgatc 224 Query: 353 actagctttgccttggagttcctgagggtcctgaggacggtcttgtagccgagcgtgtac 412 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 223 actagcttcgccttggagttcctgagggtcctgaggacggtcttgtagccgagcgtgtac 164 Query: 413 ttgccactcttcatgacaagctgcagcttgttgttgatgttgtccccggacttcttcgtc 472 ||||| |||||||| || ||||||||||||||||||||||||||| ||||||||||||| Sbjct: 163 ttgccgctcttcatcacgagctgcagcttgttgttgatgttgtccgtggacttcttcgtc 104 Query: 473 ttctt 477 ||||| Sbjct: 103 ttctt 99 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 67 agaccaaatcaagtccagcaagaactaca 95 ||||||||||||||||||||| ||||||| Sbjct: 507 agaccaaatcaagtccagcaacaactaca 479
>gb|AY107738.1| Zea mays PCO142140 mRNA sequence Length = 731 Score = 335 bits (169), Expect = 8e-89 Identities = 271/305 (88%) Strand = Plus / Minus Query: 173 ttgatgatgtcggagtcaccagggtcaatgatgctcaagcagcagactcggaagtattta 232 |||||||| || || |||||||| ||||| ||||| | ||||||||| || ||||||||| Sbjct: 409 ttgatgatatcagaatcaccaggatcaataatgctgaggcagcagacccgaaagtattta 350 Query: 233 ccacaggcagttcccaaatcaacattgtttccatggtagtggtggacagtgaccttcgcc 292 |||||||||||||| | || ||||||||||||||| ||||||||||||||||||| ||| Sbjct: 349 ccacaggcagttccaaggtcgacattgtttccatggaagtggtggacagtgaccttggcc 290 Query: 293 aacatagcatagtactcaatctcggacttgcgaagtggagggcagttattagcaaggatc 352 | |||||||||||||||||| || ||||| ||||| || |||||||| ||||| | |||| Sbjct: 289 agcatagcatagtactcaatttcagacttacgaaggggcgggcagttgttagcgatgatc 230 Query: 353 actagctttgccttggagttcctgagggtcctgaggacggtcttgtagccgagcgtgtac 412 |||||||| | ||| ||||||||||| |||||||||||||||||||||||||| |||||| Sbjct: 229 actagcttcgacttagagttcctgagagtcctgaggacggtcttgtagccgagagtgtac 170 Query: 413 ttgccactcttcatgacaagctgcagcttgttgttgatgttgtccccggacttcttcgtc 472 |||||||||||||| ||||||||||||||||| |||||||||||| ||| ||||||||| Sbjct: 169 ttgccactcttcataacaagctgcagcttgttattgatgttgtccgtggatttcttcgtc 110 Query: 473 ttctt 477 ||||| Sbjct: 109 ttctt 105
>gb|AF034949.1|AF034949 Zea mays ribosomal protein L30 (rpl30) mRNA, complete cds Length = 686 Score = 335 bits (169), Expect = 8e-89 Identities = 271/305 (88%) Strand = Plus / Minus Query: 173 ttgatgatgtcggagtcaccagggtcaatgatgctcaagcagcagactcggaagtattta 232 |||||||| || || |||||||| ||||| ||||| | ||||||||| || ||||||||| Sbjct: 398 ttgatgatatcagaatcaccaggatcaataatgctgaggcagcagacccgaaagtattta 339 Query: 233 ccacaggcagttcccaaatcaacattgtttccatggtagtggtggacagtgaccttcgcc 292 |||||||||||||| | || ||||||||||||||| ||||||||||||||||||| ||| Sbjct: 338 ccacaggcagttccaaggtcgacattgtttccatggaagtggtggacagtgaccttggcc 279 Query: 293 aacatagcatagtactcaatctcggacttgcgaagtggagggcagttattagcaaggatc 352 | |||||||||||||||||| || ||||| ||||| || |||||||| ||||| | |||| Sbjct: 278 agcatagcatagtactcaatttcagacttacgaaggggcgggcagttgttagcgatgatc 219 Query: 353 actagctttgccttggagttcctgagggtcctgaggacggtcttgtagccgagcgtgtac 412 |||||||| | ||| ||||||||||| |||||||||||||||||||||||||| |||||| Sbjct: 218 actagcttcgacttagagttcctgagagtcctgaggacggtcttgtagccgagagtgtac 159 Query: 413 ttgccactcttcatgacaagctgcagcttgttgttgatgttgtccccggacttcttcgtc 472 |||||||||||||| ||||||||||||||||| |||||||||||| ||| ||||||||| Sbjct: 158 ttgccactcttcataacaagctgcagcttgttattgatgttgtccgtggatttcttcgtc 99 Query: 473 ttctt 477 ||||| Sbjct: 98 ttctt 94
>gb|AY109857.1| Zea mays CL1835_1 mRNA sequence Length = 645 Score = 327 bits (165), Expect = 2e-86 Identities = 270/305 (88%) Strand = Plus / Minus Query: 173 ttgatgatgtcggagtcaccagggtcaatgatgctcaagcagcagactcggaagtattta 232 |||||||| || || |||||||| || || ||||| | ||||||||| ||||||||||| Sbjct: 382 ttgatgatatcagaatcaccaggatcgataatgctgaggcagcagacacggaagtatttt 323 Query: 233 ccacaggcagttcccaaatcaacattgtttccatggtagtggtggacagtgaccttcgcc 292 |||||||| ||||| | |||||||||||||||||| |||||||||| || ||||| ||| Sbjct: 322 ccacaggctgttccaaggtcaacattgtttccatggaagtggtggactgtcaccttagcc 263 Query: 293 aacatagcatagtactcaatctcggacttgcgaagtggagggcagttattagcaaggatc 352 | |||||||||||||||||| || ||||| ||||| ||||| ||||| ||||||| |||| Sbjct: 262 agcatagcatagtactcaatttcagacttccgaagcggaggacagttgttagcaatgatc 203 Query: 353 actagctttgccttggagttcctgagggtcctgaggacggtcttgtagccgagcgtgtac 412 |||||||||| ||| || |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 202 actagctttgacttagaattcctgagggtcctgaggacagtcttgtagccgagcgtgtac 143 Query: 413 ttgccactcttcatgacaagctgcagcttgttgttgatgttgtccccggacttcttcgtc 472 ||||| |||||||| |||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 142 ttgccgctcttcatcacaagctgaagcttgttgttgatgttgtccgtggacttcttcgtc 83 Query: 473 ttctt 477 ||||| Sbjct: 82 ttctt 78
>dbj|AK120984.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023042D20, full insert sequence Length = 628 Score = 228 bits (115), Expect = 1e-56 Identities = 247/291 (84%) Strand = Plus / Minus Query: 167 gttgcgttgatgatgtcggagtcaccagggtcaatgatgctcaagcagcagactcggaag 226 |||| |||||||||||| |||||||||||||| |||||||| | |||||| || ||| || Sbjct: 404 gttgtgttgatgatgtccgagtcaccagggtcgatgatgctgaggcagcacacccggtag 345 Query: 227 tatttaccacaggcagttcccaaatcaacattgtttccatggtagtggtggacagtgacc 286 || || || ||||||||||| | ||||||||||||||||||| | ||||| || | || Sbjct: 344 tacttgccgcaggcagttccaagatcaacattgtttccatggaaatggtgaacgctaact 285 Query: 287 ttcgccaacatagcatagtactcaatctcggacttgcgaagtggagggcagttattagca 346 || ||||||| || || ||||||||||| ||||| | |||||||||||||| || ||| Sbjct: 284 tttcccaacatggcgtaatactcaatctcagacttcctgagtggagggcagttgtttgca 225 Query: 347 aggatcactagctttgccttggagttcctgagggtcctgaggacggtcttgtagccgagc 406 ||||| | ||||| |||||||||| | || ||| ||||||||||||||||||||||| Sbjct: 224 aggataatcagcttccccttggagttgcgcagcgtcttgaggacggtcttgtagccgagc 165 Query: 407 gtgtacttgccactcttcatgacaagctgcagcttgttgttgatgttgtcc 457 ||||||||||| |||||||| || ||||||||||||||||||||||||||| Sbjct: 164 gtgtacttgccgctcttcatcaccagctgcagcttgttgttgatgttgtcc 114
>gb|AY846825.1| Triticum aestivum ribosomal protein L30 mRNA, complete cds Length = 341 Score = 226 bits (114), Expect = 5e-56 Identities = 258/306 (84%) Strand = Plus / Minus Query: 172 gttgatgatgtcggagtcaccagggtcaatgatgctcaagcagcagactcggaagtattt 231 |||||||||||| |||||||||||||| | |||||| | |||||| || ||| |||| || Sbjct: 319 gttgatgatgtccgagtcaccagggtcgaggatgctgaggcagcacacccggtagtactt 260 Query: 232 accacaggcagttcccaaatcaacattgtttccatggtagtggtggacagtgaccttcgc 291 || ||||||||||| | ||||||||||||||||||| | ||||| || | | ||||| Sbjct: 259 gccgcaggcagttccaagatcaacattgtttccatggaaatggtgcacgctaattttcgc 200 Query: 292 caacatagcatagtactcaatctcggacttgcgaagtggagggcagttattagcaaggat 351 ||||||||| ||| |||||||||| ||||| | ||| ||||||||||| || || ||||| Sbjct: 199 caacatagcgtagcactcaatctctgacttcctaaggggagggcagttgtttgcgaggat 140 Query: 352 cactagctttgccttggagttcctgagggtcctgaggacggtcttgtagccgagcgtgta 411 | ||||| ||| |||| | | ||| ||| |||||||||||||||||||||||||||| Sbjct: 139 tatcagcttcccctcggagctgcggagcgtcttgaggacggtcttgtagccgagcgtgta 80 Query: 412 cttgccactcttcatgacaagctgcagcttgttgttgatgttgtccccggacttcttcgt 471 |||||| |||||||| || ||||||||||||||||||||||| |||||| |||||||| Sbjct: 79 cttgccgctcttcatcaccagctgcagcttgttgttgatgttctccccgctcttcttcgc 20 Query: 472 cttctt 477 |||||| Sbjct: 19 cttctt 14
>ref|NM_191057.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 327 Score = 180 bits (91), Expect = 3e-42 Identities = 202/239 (84%) Strand = Plus / Minus Query: 212 cagcagactcggaagtatttaccacaggcagttcccaaatcaacattgtttccatggtag 271 ||||| |||||| |||| || || |||||||| || | ||||||||||||||||| | || Sbjct: 266 cagcacactcggtagtacttgccgcaggcagtgccaagatcaacattgtttccattgaag 207 Query: 272 tggtggacagtgaccttcgccaacatagcatagtactcaatctcggacttgcgaagtgga 331 || | ||| | || || ||| |||||||||||||||||| || ||||| | ||||||| Sbjct: 206 tgatacacactaacttttcccagcatagcatagtactcaatttcagacttcctaagtgga 147 Query: 332 gggcagttattagcaaggatcactagctttgccttggagttcctgagggtcctgaggacg 391 |||||||| || |||| ||| |||||||| | |||||||| | ||||||| |||||||| Sbjct: 146 gggcagttgtttgcaacgataactagcttccctttggagttgcggagggtcttgaggacg 87 Query: 392 gtcttgtagccgagcgtgtacttgccactcttcatgacaagctgcagcttgttgttgat 450 |||||||||||||| ||||||||||| |||||||| || |||||||||||||||||||| Sbjct: 86 gtcttgtagccgagggtgtacttgccgctcttcatcaccagctgcagcttgttgttgat 28
>dbj|AK062929.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-109-A05, full insert sequence Length = 635 Score = 180 bits (91), Expect = 3e-42 Identities = 202/239 (84%) Strand = Plus / Minus Query: 212 cagcagactcggaagtatttaccacaggcagttcccaaatcaacattgtttccatggtag 271 ||||| |||||| |||| || || |||||||| || | ||||||||||||||||| | || Sbjct: 334 cagcacactcggtagtacttgccgcaggcagtgccaagatcaacattgtttccattgaag 275 Query: 272 tggtggacagtgaccttcgccaacatagcatagtactcaatctcggacttgcgaagtgga 331 || | ||| | || || ||| |||||||||||||||||| || ||||| | ||||||| Sbjct: 274 tgatacacactaacttttcccagcatagcatagtactcaatttcagacttcctaagtgga 215 Query: 332 gggcagttattagcaaggatcactagctttgccttggagttcctgagggtcctgaggacg 391 |||||||| || |||| ||| |||||||| | |||||||| | ||||||| |||||||| Sbjct: 214 gggcagttgtttgcaacgataactagcttccctttggagttgcggagggtcttgaggacg 155 Query: 392 gtcttgtagccgagcgtgtacttgccactcttcatgacaagctgcagcttgttgttgat 450 |||||||||||||| ||||||||||| |||||||| || |||||||||||||||||||| Sbjct: 154 gtcttgtagccgagggtgtacttgccgctcttcatcaccagctgcagcttgttgttgat 96
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 172 bits (87), Expect = 7e-40 Identities = 102/107 (95%) Strand = Plus / Plus Query: 363 ccttggagttcctgagggtcctgaggacggtcttgtagccgagcgtgtacttgccactct 422 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 9659895 ccttggagttcctgagggtcctgaggacggtcttgtagccgagcgtgtacttgccgctct 9659954 Query: 423 tcatgacaagctgcagcttgttgttgatgttgtccccggacttcttc 469 |||| || ||||||||||||||||||||||||||| |||||||||| Sbjct: 9659955 tcatcacgagctgcagcttgttgttgatgttgtccgtggacttcttc 9660001 Score = 115 bits (58), Expect = 1e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 365 ttggagttcctgagggtcctgaggacggtcttgtagccgagcgtgtacttgccactcttc 424 |||||||| | ||||||| |||||||||||||||||||||| ||||||||||| |||||| Sbjct: 34545605 ttggagttgcggagggtcttgaggacggtcttgtagccgagggtgtacttgccgctcttc 34545664 Query: 425 atgacaagctgcagcttgttgttgat 450 || || |||||||||||||||||||| Sbjct: 34545665 atcaccagctgcagcttgttgttgat 34545690 Score = 89.7 bits (45), Expect = 8e-15 Identities = 78/89 (87%) Strand = Plus / Plus Query: 272 tggtggacagtgaccttcgccaacatagcatagtactcaatctcggacttgcgaagtgga 331 |||||||| |||||||| ||||||||||| ||||||||||| || ||||| ||||| || Sbjct: 9657933 tggtggacggtgaccttggccaacatagcgtagtactcaatttctgacttccgaagaggt 9657992 Query: 332 gggcagttattagcaaggatcactagctt 360 |||||||| |||| || |||||||||||| Sbjct: 9657993 gggcagttgttagaaatgatcactagctt 9658021 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 295 catagcatagtactcaatctcggacttgcgaagtggagggcagttattagcaaggatcac 354 |||||||||||||||||| || ||||| | ||||||||||||||| || |||| ||| || Sbjct: 34544328 catagcatagtactcaatttcagacttcctaagtggagggcagttgtttgcaacgataac 34544387 Query: 355 tagctt 360 |||||| Sbjct: 34544388 tagctt 34544393 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 190 accagggtcaatgatgctcaagcagcagactcggaagtatttaccacaggcagttcccaa 249 |||||| ||||| ||||| | |||||| || |||||||||||||||||||| || |||| Sbjct: 9657483 accaggatcaataatgctgaggcagcaaacacggaagtatttaccacaggctgtccccag 9657542 Query: 250 atcaacatt 258 ||| ||||| Sbjct: 9657543 atcgacatt 9657551 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 67 agaccaaatcaagtccagcaagaactaca 95 ||||||||||||||||||||| ||||||| Sbjct: 9657273 agaccaaatcaagtccagcaacaactaca 9657301
>dbj|AP000836.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0038F12 Length = 190014 Score = 172 bits (87), Expect = 7e-40 Identities = 102/107 (95%) Strand = Plus / Plus Query: 363 ccttggagttcctgagggtcctgaggacggtcttgtagccgagcgtgtacttgccactct 422 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 97898 ccttggagttcctgagggtcctgaggacggtcttgtagccgagcgtgtacttgccgctct 97957 Query: 423 tcatgacaagctgcagcttgttgttgatgttgtccccggacttcttc 469 |||| || ||||||||||||||||||||||||||| |||||||||| Sbjct: 97958 tcatcacgagctgcagcttgttgttgatgttgtccgtggacttcttc 98004 Score = 89.7 bits (45), Expect = 8e-15 Identities = 78/89 (87%) Strand = Plus / Plus Query: 272 tggtggacagtgaccttcgccaacatagcatagtactcaatctcggacttgcgaagtgga 331 |||||||| |||||||| ||||||||||| ||||||||||| || ||||| ||||| || Sbjct: 95936 tggtggacggtgaccttggccaacatagcgtagtactcaatttctgacttccgaagaggt 95995 Query: 332 gggcagttattagcaaggatcactagctt 360 |||||||| |||| || |||||||||||| Sbjct: 95996 gggcagttgttagaaatgatcactagctt 96024 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 190 accagggtcaatgatgctcaagcagcagactcggaagtatttaccacaggcagttcccaa 249 |||||| ||||| ||||| | |||||| || |||||||||||||||||||| || |||| Sbjct: 95486 accaggatcaataatgctgaggcagcaaacacggaagtatttaccacaggctgtccccag 95545 Query: 250 atcaacatt 258 ||| ||||| Sbjct: 95546 atcgacatt 95554 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 67 agaccaaatcaagtccagcaagaactaca 95 ||||||||||||||||||||| ||||||| Sbjct: 95276 agaccaaatcaagtccagcaacaactaca 95304
>gb|AY106576.1| Zea mays PCO093173 mRNA sequence Length = 771 Score = 170 bits (86), Expect = 3e-39 Identities = 230/278 (82%) Strand = Plus / Minus Query: 174 tgatgatgtcggagtcaccagggtcaatgatgctcaagcagcagactcggaagtatttac 233 |||||||||| |||||||| ||||| ||||| || | |||||| || | | |||| || | Sbjct: 413 tgatgatgtccgagtcacctgggtcgatgatactgaggcagcacaccctgtagtacttgc 354 Query: 234 cacaggcagttcccaaatcaacattgtttccatggtagtggtggacagtgaccttcgcca 293 | |||||||| || | ||||||||||||||| ||| | ||||| ||| | || || |||| Sbjct: 353 cgcaggcagtgccaagatcaacattgtttccgtggaaatggtgcacactaactttggcca 294 Query: 294 acatagcatagtactcaatctcggacttgcgaagtggagggcagttattagcaaggatca 353 ||| || |||||||||||||| ||||| | ||||||||||||||| || || | ||| | Sbjct: 293 gcatggcgtagtactcaatctcagacttcctaagtggagggcagttgtttgcgatgatga 234 Query: 354 ctagctttgccttggagttcctgagggtcctgaggacggtcttgtagccgagcgtgtact 413 |||||| |||||||||| | || ||| ||||||||||||||||||| || ||||||| Sbjct: 233 tcagctttcccttggagttgcgcagcgtcttgaggacggtcttgtagcccagggtgtact 174 Query: 414 tgccactcttcatgacaagctgcagcttgttgttgatg 451 |||| |||||||| || ||||||||||||||||||||| Sbjct: 173 tgccgctcttcatcaccagctgcagcttgttgttgatg 136
>gb|BT018019.1| Zea mays clone EL01N0529A10.c mRNA sequence Length = 625 Score = 163 bits (82), Expect = 7e-37 Identities = 229/278 (82%) Strand = Plus / Minus Query: 174 tgatgatgtcggagtcaccagggtcaatgatgctcaagcagcagactcggaagtatttac 233 |||||||||| |||||||| ||||| ||||| || | |||||| || | | |||| || | Sbjct: 326 tgatgatgtccgagtcacctgggtcgatgatactgaggcagcacaccctgtagtacttgc 267 Query: 234 cacaggcagttcccaaatcaacattgtttccatggtagtggtggacagtgaccttcgcca 293 | |||||||| || | ||||||||||||||| ||| | ||||| || | || || |||| Sbjct: 266 cgcaggcagtgccaagatcaacattgtttccgtggaaatggtgcacgctaactttggcca 207 Query: 294 acatagcatagtactcaatctcggacttgcgaagtggagggcagttattagcaaggatca 353 ||| || |||||||||||||| ||||| | ||||||||||||||| || || | ||| | Sbjct: 206 gcatggcgtagtactcaatctcagacttcctaagtggagggcagttgtttgcgatgatga 147 Query: 354 ctagctttgccttggagttcctgagggtcctgaggacggtcttgtagccgagcgtgtact 413 |||||| |||||||||| | || ||| ||||||||||||||||||| || ||||||| Sbjct: 146 tcagctttcccttggagttgcgcagcgtcttgaggacggtcttgtagcccagggtgtact 87 Query: 414 tgccactcttcatgacaagctgcagcttgttgttgatg 451 |||| |||||||| || ||||||||||||||||||||| Sbjct: 86 tgccgctcttcatcaccagctgcagcttgttgttgatg 49
>gb|AC097175.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1119_H02, complete sequence Length = 138584 Score = 125 bits (63), Expect = 1e-25 Identities = 87/95 (91%) Strand = Plus / Minus Query: 363 ccttggagttcctgagggtcctgaggacggtcttgtagccgagcgtgtacttgccactct 422 |||||||||| | || ||| |||||||||||||||||||||||||||||||||| |||| Sbjct: 137031 ccttggagttgcgcagcgtcttgaggacggtcttgtagccgagcgtgtacttgccgctct 136972 Query: 423 tcatgacaagctgcagcttgttgttgatgttgtcc 457 |||| || ||||||||||||||||||||||||||| Sbjct: 136971 tcatcaccagctgcagcttgttgttgatgttgtcc 136937 Score = 54.0 bits (27), Expect = 4e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 190 accagggtcaatgatgctcaagcagcagactcggaagtatttaccacaggcagttcccaa 249 ||||||||| |||||||| | |||||| || ||| |||| || || ||||||||||| | Sbjct: 138154 accagggtcgatgatgctgaggcagcacacccggtagtacttgccgcaggcagttccaag 138095 Query: 250 atcaacattgt 260 ||||||||||| Sbjct: 138094 atcaacattgt 138084 Score = 50.1 bits (25), Expect = 0.007 Identities = 52/61 (85%) Strand = Plus / Minus Query: 291 ccaacatagcatagtactcaatctcggacttgcgaagtggagggcagttattagcaagga 350 ||||||| || || ||||||||||| ||||| | |||||||||||||| || ||||||| Sbjct: 137928 ccaacatggcgtaatactcaatctcagacttcctgagtggagggcagttgtttgcaagga 137869 Query: 351 t 351 | Sbjct: 137868 t 137868
>gb|AC129718.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0088I06, complete sequence Length = 187651 Score = 125 bits (63), Expect = 1e-25 Identities = 87/95 (91%) Strand = Plus / Minus Query: 363 ccttggagttcctgagggtcctgaggacggtcttgtagccgagcgtgtacttgccactct 422 |||||||||| | || ||| |||||||||||||||||||||||||||||||||| |||| Sbjct: 1685 ccttggagttgcgcagcgtcttgaggacggtcttgtagccgagcgtgtacttgccgctct 1626 Query: 423 tcatgacaagctgcagcttgttgttgatgttgtcc 457 |||| || ||||||||||||||||||||||||||| Sbjct: 1625 tcatcaccagctgcagcttgttgttgatgttgtcc 1591 Score = 54.0 bits (27), Expect = 4e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 190 accagggtcaatgatgctcaagcagcagactcggaagtatttaccacaggcagttcccaa 249 ||||||||| |||||||| | |||||| || ||| |||| || || ||||||||||| | Sbjct: 2808 accagggtcgatgatgctgaggcagcacacccggtagtacttgccgcaggcagttccaag 2749 Query: 250 atcaacattgt 260 ||||||||||| Sbjct: 2748 atcaacattgt 2738 Score = 50.1 bits (25), Expect = 0.007 Identities = 52/61 (85%) Strand = Plus / Minus Query: 291 ccaacatagcatagtactcaatctcggacttgcgaagtggagggcagttattagcaagga 350 ||||||| || || ||||||||||| ||||| | |||||||||||||| || ||||||| Sbjct: 2582 ccaacatggcgtaatactcaatctcagacttcctgagtggagggcagttgtttgcaagga 2523 Query: 351 t 351 | Sbjct: 2522 t 2522
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 125 bits (63), Expect = 1e-25 Identities = 87/95 (91%) Strand = Plus / Minus Query: 363 ccttggagttcctgagggtcctgaggacggtcttgtagccgagcgtgtacttgccactct 422 |||||||||| | || ||| |||||||||||||||||||||||||||||||||| |||| Sbjct: 23933196 ccttggagttgcgcagcgtcttgaggacggtcttgtagccgagcgtgtacttgccgctct 23933137 Query: 423 tcatgacaagctgcagcttgttgttgatgttgtcc 457 |||| || ||||||||||||||||||||||||||| Sbjct: 23933136 tcatcaccagctgcagcttgttgttgatgttgtcc 23933102 Score = 54.0 bits (27), Expect = 4e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 190 accagggtcaatgatgctcaagcagcagactcggaagtatttaccacaggcagttcccaa 249 ||||||||| |||||||| | |||||| || ||| |||| || || ||||||||||| | Sbjct: 23934319 accagggtcgatgatgctgaggcagcacacccggtagtacttgccgcaggcagttccaag 23934260 Query: 250 atcaacattgt 260 ||||||||||| Sbjct: 23934259 atcaacattgt 23934249 Score = 50.1 bits (25), Expect = 0.007 Identities = 52/61 (85%) Strand = Plus / Minus Query: 291 ccaacatagcatagtactcaatctcggacttgcgaagtggagggcagttattagcaagga 350 ||||||| || || ||||||||||| ||||| | |||||||||||||| || ||||||| Sbjct: 23934093 ccaacatggcgtaatactcaatctcagacttcctgagtggagggcagttgtttgcaagga 23934034 Query: 351 t 351 | Sbjct: 23934033 t 23934033
>gb|AF475116.1| Triticum aestivum ribosomal protein L30 mRNA, partial cds Length = 228 Score = 119 bits (60), Expect = 9e-24 Identities = 85/92 (92%), Gaps = 1/92 (1%) Strand = Plus / Minus Query: 363 ccttggagttcctgagggtcct-gaggacggtcttgtagccgagcgtgtacttgccactc 421 |||||||| ||| ||| ||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 179 ccttggagctccggagcgtccttgaggacggtcttgtagccgagcgtgtacttgccgctc 120 Query: 422 ttcatgacaagctgcagcttgttgttgatgtt 453 ||||| || ||||||||||||||||||||||| Sbjct: 119 ttcatcaccagctgcagcttgttgttgatgtt 88
>dbj|AP003570.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0432B10 Length = 131918 Score = 115 bits (58), Expect = 1e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 365 ttggagttcctgagggtcctgaggacggtcttgtagccgagcgtgtacttgccactcttc 424 |||||||| | ||||||| |||||||||||||||||||||| ||||||||||| |||||| Sbjct: 42899 ttggagttgcggagggtcttgaggacggtcttgtagccgagggtgtacttgccgctcttc 42958 Query: 425 atgacaagctgcagcttgttgttgat 450 || || |||||||||||||||||||| Sbjct: 42959 atcaccagctgcagcttgttgttgat 42984 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 295 catagcatagtactcaatctcggacttgcgaagtggagggcagttattagcaaggatcac 354 |||||||||||||||||| || ||||| | ||||||||||||||| || |||| ||| || Sbjct: 41622 catagcatagtactcaatttcagacttcctaagtggagggcagttgtttgcaacgataac 41681 Query: 355 tagctt 360 |||||| Sbjct: 41682 tagctt 41687
>dbj|AP003247.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0425G02 Length = 155432 Score = 115 bits (58), Expect = 1e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 365 ttggagttcctgagggtcctgaggacggtcttgtagccgagcgtgtacttgccactcttc 424 |||||||| | ||||||| |||||||||||||||||||||| ||||||||||| |||||| Sbjct: 121324 ttggagttgcggagggtcttgaggacggtcttgtagccgagggtgtacttgccgctcttc 121383 Query: 425 atgacaagctgcagcttgttgttgat 450 || || |||||||||||||||||||| Sbjct: 121384 atcaccagctgcagcttgttgttgat 121409 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 295 catagcatagtactcaatctcggacttgcgaagtggagggcagttattagcaaggatcac 354 |||||||||||||||||| || ||||| | ||||||||||||||| || |||| ||| || Sbjct: 120047 catagcatagtactcaatttcagacttcctaagtggagggcagttgtttgcaacgataac 120106 Query: 355 tagctt 360 |||||| Sbjct: 120107 tagctt 120112
>ref|NM_112760.2| Arabidopsis thaliana structural constituent of ribosome AT3G18740 mRNA, complete cds Length = 543 Score = 101 bits (51), Expect = 2e-18 Identities = 87/99 (87%) Strand = Plus / Minus Query: 173 ttgatgatgtcggagtcaccagggtcaatgatgctcaagcagcagactcggaagtattta 232 |||||||||||||| |||||||| |||| |||||| | ||| | ||||||||||||||| Sbjct: 386 ttgatgatgtcggaatcaccaggatcaacgatgctgaggcaagaaactcggaagtattta 327 Query: 233 ccacaggcagttcccaaatcaacattgtttccatggtag 271 ||||| ||||| ||||||||||||||||| |||| |||| Sbjct: 326 ccacaagcagtacccaaatcaacattgttgccattgtag 288
>gb|AF446880.1|AF446880 Arabidopsis thaliana AT3g18740/MVE11_10 mRNA, complete cds Length = 339 Score = 101 bits (51), Expect = 2e-18 Identities = 87/99 (87%) Strand = Plus / Minus Query: 173 ttgatgatgtcggagtcaccagggtcaatgatgctcaagcagcagactcggaagtattta 232 |||||||||||||| |||||||| |||| |||||| | ||| | ||||||||||||||| Sbjct: 317 ttgatgatgtcggaatcaccaggatcaacgatgctgaggcaagaaactcggaagtattta 258 Query: 233 ccacaggcagttcccaaatcaacattgtttccatggtag 271 ||||| ||||| ||||||||||||||||| |||| |||| Sbjct: 257 ccacaagcagtacccaaatcaacattgttgccattgtag 219
>gb|AY052710.1| Arabidopsis thaliana AT3g18740/MVE11_10 mRNA, complete cds Length = 526 Score = 101 bits (51), Expect = 2e-18 Identities = 87/99 (87%) Strand = Plus / Minus Query: 173 ttgatgatgtcggagtcaccagggtcaatgatgctcaagcagcagactcggaagtattta 232 |||||||||||||| |||||||| |||| |||||| | ||| | ||||||||||||||| Sbjct: 368 ttgatgatgtcggaatcaccaggatcaacgatgctgaggcaagaaactcggaagtattta 309 Query: 233 ccacaggcagttcccaaatcaacattgtttccatggtag 271 ||||| ||||| ||||||||||||||||| |||| |||| Sbjct: 308 ccacaagcagtacccaaatcaacattgttgccattgtag 270
>gb|AY088285.1| Arabidopsis thaliana clone 5180 mRNA, complete sequence Length = 531 Score = 101 bits (51), Expect = 2e-18 Identities = 87/99 (87%) Strand = Plus / Minus Query: 173 ttgatgatgtcggagtcaccagggtcaatgatgctcaagcagcagactcggaagtattta 232 |||||||||||||| |||||||| |||| |||||| | ||| | ||||||||||||||| Sbjct: 386 ttgatgatgtcggaatcaccaggatcaacgatgctgaggcaagaaactcggaagtattta 327 Query: 233 ccacaggcagttcccaaatcaacattgtttccatggtag 271 ||||| ||||| ||||||||||||||||| |||| |||| Sbjct: 326 ccacaagcagtacccaaatcaacattgttgccattgtag 288
>dbj|AB026654.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MVE11 Length = 75508 Score = 101 bits (51), Expect = 2e-18 Identities = 87/99 (87%) Strand = Plus / Minus Query: 173 ttgatgatgtcggagtcaccagggtcaatgatgctcaagcagcagactcggaagtattta 232 |||||||||||||| |||||||| |||| |||||| | ||| | ||||||||||||||| Sbjct: 37682 ttgatgatgtcggaatcaccaggatcaacgatgctgaggcaagaaactcggaagtattta 37623 Query: 233 ccacaggcagttcccaaatcaacattgtttccatggtag 271 ||||| ||||| ||||||||||||||||| |||| |||| Sbjct: 37622 ccacaagcagtacccaaatcaacattgttgccattgtag 37584
>gb|AF227621.1|AF227621 Euphorbia esula 60S ribosomal protein L30 mRNA, complete cds Length = 537 Score = 99.6 bits (50), Expect = 8e-18 Identities = 104/122 (85%) Strand = Plus / Minus Query: 224 aagtatttaccacaggcagttcccaaatcaacattgtttccatggtagtggtggacagtg 283 |||||||| ||||| ||||| ||||| || ||||||||||||| ||||||||| || Sbjct: 278 aagtatttcccacaagcagtgcccaagtctacattgtttccattgtagtggtgaactcca 219 Query: 284 accttcgccaacatagcatagtactcaatctcggacttgcgaagtggagggcagttatta 343 ||||| ||||||||||||||||| ||||| |||||||| | ||| ||||| ||||||||| Sbjct: 218 accttagccaacatagcatagtattcaatttcggacttcctaaggggaggacagttatta 159 Query: 344 gc 345 || Sbjct: 158 gc 157 Score = 44.1 bits (22), Expect = 0.42 Identities = 37/42 (88%) Strand = Plus / Minus Query: 392 gtcttgtagccgagcgtgtacttgccactcttcatgacaagc 433 |||||||| ||||| ||| |||| ||||||||||| |||||| Sbjct: 110 gtcttgtatccgagggtgaactttccactcttcataacaagc 69
>gb|BT012850.1| Lycopersicon esculentum clone 113928F, mRNA sequence Length = 611 Score = 91.7 bits (46), Expect = 2e-15 Identities = 112/134 (83%) Strand = Plus / Minus Query: 188 tcaccagggtcaatgatgctcaagcagcagactcggaagtatttaccacaggcagttccc 247 ||||| |||||||| || || | ||| || |||| ||||||||||||||||||||| ||| Sbjct: 374 tcacctgggtcaataatactgaggcaacaaactctgaagtatttaccacaggcagtcccc 315 Query: 248 aaatcaacattgtttccatggtagtggtggacagtgaccttcgccaacatagcatagtac 307 || || || |||||||| | ||||||||| || ||||| |||||||||||||||||| Sbjct: 314 aagtctacgttgtttccgttgtagtggtgaactccaacctttgccaacatagcatagtac 255 Query: 308 tcaatctcggactt 321 || ||||| ||||| Sbjct: 254 tctatctcagactt 241
>emb|CR954185.2| Medicago truncatula chromosome 5 clone mth4-20m5, COMPLETE SEQUENCE Length = 210708 Score = 85.7 bits (43), Expect = 1e-13 Identities = 115/139 (82%) Strand = Plus / Plus Query: 173 ttgatgatgtcggagtcaccagggtcaatgatgctcaagcagcagactcggaagtattta 232 |||||||||||||| |||||||| ||||| |||| | |||||| |||| | |||| || Sbjct: 112788 ttgatgatgtcggaatcaccaggatcaataatgccgaggcagcacactctgtagtacttt 112847 Query: 233 ccacaggcagttcccaaatcaacattgtttccatggtagtggtggacagtgaccttcgcc 292 || || ||||| ||||| |||||||||||||||| || |||| ||| ||||| ||| Sbjct: 112848 ccgcaagcagtgcccaagtcaacattgtttccattgtgatggtagactccaaccttagcc 112907 Query: 293 aacatagcatagtactcaa 311 ||||||||||||||||||| Sbjct: 112908 aacatagcatagtactcaa 112926
>ref|NM_103317.1| Arabidopsis thaliana structural constituent of ribosome AT1G36240 mRNA, complete cds Length = 339 Score = 77.8 bits (39), Expect = 3e-11 Identities = 117/143 (81%) Strand = Plus / Minus Query: 173 ttgatgatgtcggagtcaccagggtcaatgatgctcaagcagcagactcggaagtattta 232 ||||||||||| |||||||| ||||||| ||||| | ||| | || |||||||||||| Sbjct: 317 ttgatgatgtcagagtcacctgggtcaactatgctgaggcatgacacacggaagtattta 258 Query: 233 ccacaggcagttcccaaatcaacattgtttccatggtagtggtggacagtgaccttcgcc 292 || |||||||| || | |||||||||||||| || |||||| || || || || || Sbjct: 257 ccgcaggcagtaccaagatcaacattgtttctattgtagtgatgaactccaactttagca 198 Query: 293 aacatagcatagtactcaatctc 315 | ||||||||||||||||||||| Sbjct: 197 agcatagcatagtactcaatctc 175 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 460 ggacttcttcgtcttcttcgc 480 ||||||||||||||||||||| Sbjct: 30 ggacttcttcgtcttcttcgc 10
>gb|AF526198.1| Argopecten irradians isolate iolsaicl2ct3cn3 ribosomal protein L30 mRNA, complete cds Length = 441 Score = 69.9 bits (35), Expect = 7e-09 Identities = 62/71 (87%) Strand = Plus / Minus Query: 179 atgtcggagtcaccagggtcaatgatgctcaagcagcagactcggaagtatttaccacag 238 ||||| |||||||| |||||| ||||||| | | |||||||| |||||||||||||||| Sbjct: 350 atgtcagagtcacctgggtcagtgatgctgagggtgcagactctgaagtatttaccacag 291 Query: 239 gcagttcccaa 249 ||||| ||||| Sbjct: 290 gcagtacccaa 280
>dbj|AB188378.1| Pelodiscus sinensis PsRPL30 mRNA for ribosomal protein L30, complete cds Length = 461 Score = 61.9 bits (31), Expect = 2e-06 Identities = 76/91 (83%) Strand = Plus / Minus Query: 225 agtatttaccacaggcagttcccaaatcaacattgtttccatggtagtggtggacagtga 284 ||||||| ||||| || || ||||| |||| |||||| ||| ||||||||| ||| Sbjct: 312 agtattttccacatgctgtacccaattcaatattgttgccactgtagtggtgcacaccag 253 Query: 285 ccttcgccaacatagcatagtactcaatctc 315 |||||||||||||||||||||||||||||| Sbjct: 252 tcttcgccaacatagcatagtactcaatctc 222
>gb|AF366453.1|AF366453 Allium cepa clone AGF176 maintainer line sequence Length = 568 Score = 61.9 bits (31), Expect = 2e-06 Identities = 76/91 (83%) Strand = Plus / Plus Query: 176 atgatgtcggagtcaccagggtcaatgatgctcaagcagcagactcggaagtatttacca 235 |||||||| || ||||| || ||||| ||||||| |||||| || || || || || ||| Sbjct: 207 atgatgtccgaatcacctggatcaataatgctcaggcagcaaacacgaaaatactttcca 266 Query: 236 caggcagttcccaaatcaacattgtttccat 266 || |||||||| | ||||||||||||||||| Sbjct: 267 catgcagttccaagatcaacattgtttccat 297
>emb|Z98763.1|SPAC9G1 S.pombe chromosome I cosmid c9G1 Length = 30985 Score = 60.0 bits (30), Expect = 7e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 299 gcatagtactcaatctcggacttgcgaagtggagggcagtta 340 ||||||||||||| ||| ||||||||||| |||||||||||| Sbjct: 6725 gcatagtactcaagctctgacttgcgaagaggagggcagtta 6766
>ref|NM_001018991.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC9G1.03c), partial mRNA Length = 330 Score = 60.0 bits (30), Expect = 7e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 299 gcatagtactcaatctcggacttgcgaagtggagggcagtta 340 ||||||||||||| ||| ||||||||||| |||||||||||| Sbjct: 197 gcatagtactcaagctctgacttgcgaagaggagggcagtta 156
>gb|U52080.1|SPU52080 Schizosaccharomyces pombe ribosomal protein Rpl32p (rpl32-1) gene, complete cds Length = 930 Score = 60.0 bits (30), Expect = 7e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 299 gcatagtactcaatctcggacttgcgaagtggagggcagtta 340 ||||||||||||| ||| ||||||||||| |||||||||||| Sbjct: 677 gcatagtactcaagctctgacttgcgaagaggagggcagtta 636
>ref|XM_965533.1| PREDICTED: Tribolium castaneum similar to CG10652-PA, isoform A (LOC659206), mRNA Length = 430 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 223 gaagtatttaccacaggcagttcccaaatcaacattgtttccatggtagtggtggac 279 ||||||||||||||||||||| ||||| || || |||||||| |||||||||||| Sbjct: 302 gaagtatttaccacaggcagtgcccaactctacgttgtttccggtgtagtggtggac 246
>gb|AY440795.1| Armigeres subalbatus ASAP ID: 42395 cytosolic large ribosomal subunit L30 mRNA sequence Length = 589 Score = 56.0 bits (28), Expect = 1e-04 Identities = 80/98 (81%) Strand = Plus / Minus Query: 221 cggaagtatttaccacaggcagttcccaaatcaacattgtttccatggtagtggtggaca 280 |||||||| || || ||||| ||||||| |||| |||||| || | ||||||||||||| Sbjct: 335 cggaagtactttccrcaggcggttcccagttcaatattgttaccgttgtagtggtggaca 276 Query: 281 gtgaccttcgccaacatagcatagtactcaatctcgga 318 | ||| ||||||||||| ||||| || |||||||| Sbjct: 275 ccggtcttggccaacatagcgtagtattcgatctcgga 238
>gb|DQ226656.1| Boechera divaricarpa isolate SLW-6-C09 mRNA sequence Length = 287 Score = 54.0 bits (27), Expect = 4e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 173 ttgatgatgtcggagtcaccagggtcaatgatgctcaagcagcagactcggaagtattta 232 ||||||||||| |||||||| ||||||| ||||| | ||| | || |||||||||||| Sbjct: 217 ttgatgatgtcagagtcacctgggtcaactatgctgaggcatgaaacacggaagtattta 276 Query: 233 ccacaggcagt 243 || |||||||| Sbjct: 277 ccgcaggcagt 287
>gb|AY177709.1| Pteris vittata putative 60S ribosomal protein L30 mRNA, partial cds Length = 259 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 410 tacttgccactcttcatgacaagctgcagcttgttgttgatg 451 ||||| ||||||||||| |||||||| ||| ||||||||||| Sbjct: 93 tacttcccactcttcataacaagctgaagcctgttgttgatg 52
>gb|BT012860.1| Lycopersicon esculentum clone 113948F, mRNA sequence Length = 645 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Minus Query: 173 ttgatgatgtcggagtcaccagggtcaatgatgctca 209 ||||| |||||||| ||||| |||||||||||||||| Sbjct: 366 ttgataatgtcggaatcacctgggtcaatgatgctca 330 Score = 46.1 bits (23), Expect = 0.11 Identities = 47/55 (85%) Strand = Plus / Minus Query: 372 tcctgagggtcctgaggacggtcttgtagccgagcgtgtacttgccactcttcat 426 ||||||| ||| |||| || |||||||| || || |||||||| ||||||||||| Sbjct: 167 tcctgagagtcttgagaacagtcttgtaaccaagagtgtactttccactcttcat 113
>ref|XM_755882.1| Ustilago maydis 521 hypothetical protein (UM04828.1) partial mRNA Length = 660 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Minus Query: 425 atgacaagctgcagcttgttgttgatgttgtcc 457 ||||||||||| |||||| |||||||||||||| Sbjct: 392 atgacaagctggagcttggtgttgatgttgtcc 360 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 302 tagtactcaatctcggacttgcgaagtggagg 333 |||||||| |||||||||||||| || ||||| Sbjct: 515 tagtactcgatctcggacttgcgcagaggagg 484
>gb|BC053758.1| Xenopus laevis ribosomal protein L30, mRNA (cDNA clone MGC:64253 IMAGE:6871876), complete cds Length = 474 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 290 gccaacatagcatagtactcaatctcgga 318 |||||||| |||||||||||||||||||| Sbjct: 259 gccaacattgcatagtactcaatctcgga 231
>emb|X84380.1|STROOTRNA S.tuberosum genomic RNA expressed in roots Length = 441 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Plus Query: 173 ttgatgatgtcggagtcaccagggtcaatgatgctca 209 ||||| |||||||| ||||| |||||||||||||||| Sbjct: 395 ttgataatgtcggaatcacctgggtcaatgatgctca 431
>ref|NM_106443.3| Arabidopsis thaliana structural constituent of ribosome AT1G77940 mRNA, complete cds Length = 635 Score = 48.1 bits (24), Expect = 0.027 Identities = 51/60 (85%) Strand = Plus / Minus Query: 221 cggaagtatttaccacaggcagttcccaaatcaacattgtttccatggtagtggtggaca 280 |||||||| || || || || |||||||||||||| || ||||||| ||| ||||||||| Sbjct: 346 cggaagtactttccgcaagctgttcccaaatcaacgttatttccattgtaatggtggaca 287
>gb|DQ214211.1| Taeniopygia guttata clone 0058P0021E12 ribosomal protein L30-like mRNA, complete sequence Length = 567 Score = 48.1 bits (24), Expect = 0.027 Identities = 30/32 (93%) Strand = Plus / Minus Query: 174 tgatgatgtcggagtcaccagggtcaatgatg 205 |||||||||| |||||||| |||||||||||| Sbjct: 466 tgatgatgtcagagtcacctgggtcaatgatg 435 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 295 catagcatagtactcaatctc 315 ||||||||||||||||||||| Sbjct: 345 catagcatagtactcaatctc 325
>gb|BC073560.1| Xenopus laevis MGC82844 protein, mRNA (cDNA clone MGC:82844 IMAGE:5506948), complete cds Length = 512 Score = 48.1 bits (24), Expect = 0.027 Identities = 30/32 (93%) Strand = Plus / Minus Query: 290 gccaacatagcatagtactcaatctcggactt 321 |||||||| ||||||||||||||||| ||||| Sbjct: 240 gccaacattgcatagtactcaatctccgactt 209
>ref|NM_200028.1| Danio rerio ribosomal protein L30 (rpl30), mRNA Length = 607 Score = 48.1 bits (24), Expect = 0.027 Identities = 30/32 (93%) Strand = Plus / Minus Query: 290 gccaacatagcatagtactcaatctcggactt 321 |||||||| ||||||||||| ||||||||||| Sbjct: 276 gccaacatggcatagtactcgatctcggactt 245 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 174 tgatgatgtcggagtcaccagggtcaatgatg 205 |||||||||| || ||||| |||||||||||| Sbjct: 392 tgatgatgtcagaatcaccggggtcaatgatg 361
>emb|AM049108.1| Meladema coriacea partial mRNA for ribosomal protein L30e (rpL30e gene) Length = 268 Score = 48.1 bits (24), Expect = 0.027 Identities = 63/76 (82%) Strand = Plus / Minus Query: 174 tgatgatgtcggagtcaccagggtcaatgatgctcaagcagcagactcggaagtatttac 233 |||| ||||| |||||||||||||| ||||| || | ||| || ||||||||||||| Sbjct: 230 tgataatgtctgagtcaccagggtctgtgatggacatggtgcacacccggaagtatttac 171 Query: 234 cacaggcagttcccaa 249 |||| || |||||||| Sbjct: 170 cacacgctgttcccaa 155
>gb|AY114036.1| Arabidopsis thaliana putative ribosomal protein L30 (At1g77940) mRNA, complete cds Length = 370 Score = 48.1 bits (24), Expect = 0.027 Identities = 51/60 (85%) Strand = Plus / Minus Query: 221 cggaagtatttaccacaggcagttcccaaatcaacattgtttccatggtagtggtggaca 280 |||||||| || || || || |||||||||||||| || ||||||| ||| ||||||||| Sbjct: 269 cggaagtactttccgcaagctgttcccaaatcaacgttatttccattgtaatggtggaca 210
>gb|AY065370.1| Arabidopsis thaliana putative ribosomal protein L30 (At1g77940) mRNA, complete cds Length = 559 Score = 48.1 bits (24), Expect = 0.027 Identities = 51/60 (85%) Strand = Plus / Minus Query: 221 cggaagtatttaccacaggcagttcccaaatcaacattgtttccatggtagtggtggaca 280 |||||||| || || || || |||||||||||||| || ||||||| ||| ||||||||| Sbjct: 337 cggaagtactttccgcaagctgttcccaaatcaacgttatttccattgtaatggtggaca 278
>gb|BC062278.1| Danio rerio ribosomal protein L30, mRNA (cDNA clone MGC:77683 IMAGE:6997451), complete cds Length = 483 Score = 48.1 bits (24), Expect = 0.027 Identities = 30/32 (93%) Strand = Plus / Minus Query: 290 gccaacatagcatagtactcaatctcggactt 321 |||||||| ||||||||||| ||||||||||| Sbjct: 245 gccaacatggcatagtactcgatctcggactt 214 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 174 tgatgatgtcggagtcaccagggtcaatgatg 205 |||||||||| || ||||| |||||||||||| Sbjct: 361 tgatgatgtcagaatcaccggggtcaatgatg 330
>gb|BC049055.1| Danio rerio ribosomal protein L30, mRNA (cDNA clone MGC:56640 IMAGE:5916027), complete cds Length = 607 Score = 48.1 bits (24), Expect = 0.027 Identities = 30/32 (93%) Strand = Plus / Minus Query: 290 gccaacatagcatagtactcaatctcggactt 321 |||||||| ||||||||||| ||||||||||| Sbjct: 276 gccaacatggcatagtactcgatctcggactt 245 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 174 tgatgatgtcggagtcaccagggtcaatgatg 205 |||||||||| || ||||| |||||||||||| Sbjct: 392 tgatgatgtcagaatcaccggggtcaatgatg 361
>emb|BX817330.1|CNS0ACQT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL15ZH04 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 590 Score = 48.1 bits (24), Expect = 0.027 Identities = 51/60 (85%) Strand = Plus / Minus Query: 221 cggaagtatttaccacaggcagttcccaaatcaacattgtttccatggtagtggtggaca 280 |||||||| || || || || |||||||||||||| || ||||||| ||| ||||||||| Sbjct: 301 cggaagtactttccgcaagctgttcccaaatcaacgttatttccattgtaatggtggaca 242
>gb|AC025781.8|AC025781 Arabidopsis thaliana chromosome 1 BAC F15C21 genomic sequence, complete sequence Length = 112862 Score = 48.1 bits (24), Expect = 0.027 Identities = 36/40 (90%) Strand = Plus / Minus Query: 221 cggaagtatttaccacaggcagttcccaaatcaacattgt 260 |||||||||||||| |||||||| || | ||||||||||| Sbjct: 80013 cggaagtatttaccgcaggcagtaccaagatcaacattgt 79974 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 295 catagcatagtactcaatctc 315 ||||||||||||||||||||| Sbjct: 79183 catagcatagtactcaatctc 79163
>gb|AF401585.1| Ictalurus punctatus ribosomal protein L30 mRNA, complete cds Length = 414 Score = 48.1 bits (24), Expect = 0.027 Identities = 30/32 (93%) Strand = Plus / Minus Query: 174 tgatgatgtcggagtcaccagggtcaatgatg 205 |||||||||| || |||||||||||||||||| Sbjct: 331 tgatgatgtctgaatcaccagggtcaatgatg 300
>gb|BT004749.1| Arabidopsis thaliana At1g77940 gene, complete cds Length = 339 Score = 48.1 bits (24), Expect = 0.027 Identities = 51/60 (85%) Strand = Plus / Minus Query: 221 cggaagtatttaccacaggcagttcccaaatcaacattgtttccatggtagtggtggaca 280 |||||||| || || || || |||||||||||||| || ||||||| ||| ||||||||| Sbjct: 269 cggaagtactttccgcaagctgttcccaaatcaacgttatttccattgtaatggtggaca 210
>gb|AY085881.1| Arabidopsis thaliana clone 19274 mRNA, complete sequence Length = 555 Score = 48.1 bits (24), Expect = 0.027 Identities = 51/60 (85%) Strand = Plus / Minus Query: 221 cggaagtatttaccacaggcagttcccaaatcaacattgtttccatggtagtggtggaca 280 |||||||| || || || || |||||||||||||| || ||||||| ||| ||||||||| Sbjct: 346 cggaagtactttccgcaagctgttcccaaatcaacgttatttccattgtaatggtggaca 287
>emb|BX284622.3| Zebrafish DNA sequence from clone DKEY-174P10 in linkage group 19, complete sequence Length = 126451 Score = 48.1 bits (24), Expect = 0.027 Identities = 30/32 (93%) Strand = Plus / Minus Query: 290 gccaacatagcatagtactcaatctcggactt 321 |||||||| ||||||||||| ||||||||||| Sbjct: 17966 gccaacatggcatagtactcgatctcggactt 17935
>emb|AJ009294.1|XLAJ9294 Xenopus laevis cDNA clone 19E1-2 Length = 584 Score = 48.1 bits (24), Expect = 0.027 Identities = 30/32 (93%) Strand = Plus / Minus Query: 290 gccaacatagcatagtactcaatctcggactt 321 |||||||| ||||||||||||||||| ||||| Sbjct: 272 gccaacattgcatagtactcaatctccgactt 241
>emb|CR749175.10| Zebrafish DNA sequence from clone DKEY-284P5 in linkage group 19, complete sequence Length = 28926 Score = 48.1 bits (24), Expect = 0.027 Identities = 30/32 (93%) Strand = Plus / Minus Query: 290 gccaacatagcatagtactcaatctcggactt 321 |||||||| ||||||||||| ||||||||||| Sbjct: 22999 gccaacatggcatagtactcgatctcggactt 22968
>ref|XM_732414.1| Plasmodium chabaudi chabaudi ribosomal protein L30e (PC300414.00.0) partial mRNA Length = 327 Score = 46.1 bits (23), Expect = 0.11 Identities = 38/43 (88%) Strand = Plus / Minus Query: 228 atttaccacaggcagttcccaaatcaacattgtttccatggta 270 ||||||||||||||||||| |||||| ||||| |||||||| Sbjct: 259 atttaccacaggcagttcctaaatcattattgtcaccatggta 217
>ref|XM_738475.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000267.05.0) partial mRNA Length = 327 Score = 46.1 bits (23), Expect = 0.11 Identities = 38/43 (88%) Strand = Plus / Minus Query: 228 atttaccacaggcagttcccaaatcaacattgtttccatggta 270 ||||||||||||||||||| |||||| ||||| |||||||| Sbjct: 259 atttaccacaggcagttcctaaatcattattgtcaccatggta 217
>gb|AF297033.1|AF297033 Ophiophagus hannah ribosomal protein L30 mRNA, complete cds Length = 458 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 290 gccaacatagcatagtactcaat 312 ||||||||||||||||||||||| Sbjct: 246 gccaacatagcatagtactcaat 224
>gb|DQ214212.1| Taeniopygia guttata clone 0065P0009H12 ribosomal protein L30-like mRNA, complete sequence Length = 642 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Minus Query: 176 atgatgtcggagtcaccagggtcaatgatg 205 |||||||| |||||||| |||||||||||| Sbjct: 516 atgatgtcagagtcacctgggtcaatgatg 487
>gb|DQ214210.1| Taeniopygia guttata clone 0058P0030G07 ribosomal protein L30-like mRNA, complete sequence Length = 577 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Minus Query: 176 atgatgtcggagtcaccagggtcaatgatg 205 |||||||| |||||||| |||||||||||| Sbjct: 477 atgatgtcagagtcacctgggtcaatgatg 448
>gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 1, complete sequence Length = 2300533 Score = 44.1 bits (22), Expect = 0.42 Identities = 34/38 (89%) Strand = Plus / Plus Query: 302 tagtactcaatctcggacttgcgaagtggagggcagtt 339 |||||||| ||||| |||||||| || ||||||||||| Sbjct: 582633 tagtactcgatctcagacttgcggaggggagggcagtt 582670
>ref|XM_656139.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN3627.2), mRNA Length = 2679 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 431 agctgcagcttgttgttgatgt 452 |||||||||||||||||||||| Sbjct: 74 agctgcagcttgttgttgatgt 53
>ref|XM_566608.1| Cryptococcus neoformans var. neoformans JEC21 60s ribosomal protein l30-1 (l32) (CNA02220) partial mRNA Length = 421 Score = 44.1 bits (22), Expect = 0.42 Identities = 34/38 (89%) Strand = Plus / Minus Query: 302 tagtactcaatctcggacttgcgaagtggagggcagtt 339 |||||||| ||||| |||||||| || ||||||||||| Sbjct: 219 tagtactcgatctcagacttgcggaggggagggcagtt 182
>emb|AJ843087.1| Platichthys flesus mRNA for 60S ribosomal protein L30 (rpl30 gene) Length = 486 Score = 44.1 bits (22), Expect = 0.42 Identities = 49/58 (84%) Strand = Plus / Minus Query: 223 gaagtatttaccacaggcagttcccaaatcaacattgtttccatggtagtggtggaca 280 |||||||||||||||||| || || | |||| ||||||||| ||||||||||||| Sbjct: 357 gaagtatttaccacaggctgtaccaagctcaatgttgtttccactgtagtggtggaca 300
>gb|AC146333.35| Medicago truncatula clone mth2-8d3, complete sequence Length = 122694 Score = 44.1 bits (22), Expect = 0.42 Identities = 34/38 (89%) Strand = Plus / Minus Query: 284 accttcgccaacatagcatagtactcaatctcggactt 321 ||||| || |||||||||||||||||||| || ||||| Sbjct: 58919 acctttgctaacatagcatagtactcaatttcagactt 58882
>gb|BC077047.1| Xenopus tropicalis MGC89963 protein, mRNA (cDNA clone MGC:89963 IMAGE:7025770), complete cds Length = 470 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 290 gccaacatagcatagtactcaatctc 315 |||||||| ||||||||||||||||| Sbjct: 264 gccaacattgcatagtactcaatctc 239
>ref|NM_001005110.1| Xenopus tropicalis MGC89963 protein (MGC89963), mRNA Length = 470 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 290 gccaacatagcatagtactcaatctc 315 |||||||| ||||||||||||||||| Sbjct: 264 gccaacattgcatagtactcaatctc 239
>gb|AC068538.8| Homo sapiens BAC clone RP11-141G4 from 2, complete sequence Length = 173169 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 334 gcagttattagcaaggatcact 355 |||||||||||||||||||||| Sbjct: 167607 gcagttattagcaaggatcact 167586
>emb|CR855835.2| Xenopus tropicalis finished cDNA, clone TTpA022e03 Length = 564 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 290 gccaacatagcatagtactcaatctc 315 |||||||| ||||||||||||||||| Sbjct: 237 gccaacattgcatagtactcaatctc 212
>gb|U97398.1|SPU97398 Schizosaccharomyces pombe 60S ribosomal protein L30 homolog mRNA, partial cds Length = 220 Score = 44.1 bits (22), Expect = 0.42 Identities = 37/42 (88%) Strand = Plus / Minus Query: 299 gcatagtactcaatctcggacttgcgaagtggagggcagtta 340 ||||||||||||| ||| ||||||||||| | ||||||||| Sbjct: 208 gcatagtactcaagctctgacttgcgaagagaggggcagtta 167
>emb|AL929016.5| Zebrafish DNA sequence from clone DKEY-24J9 in linkage group 4 Contains the gene for a novel protein (zgc:63880), the 3' end of the gene for a novel protein similar to vertebrate KCND2, the 5' end of the ing3 gene for inhibitor of growth family member 3 and a CpG island, complete sequence Length = 200582 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 40 ttgattgactgataaatgatgtaca 64 |||||||||||||||||||| |||| Sbjct: 18126 ttgattgactgataaatgatctaca 18150
>gb|AC160338.2| Mus musculus BAC clone RP23-261O3 from chromosome 9, complete sequence Length = 167569 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 243 ttcccaaatcaacattgtttc 263 ||||||||||||||||||||| Sbjct: 118123 ttcccaaatcaacattgtttc 118103
>ref|NM_000989.2| Homo sapiens ribosomal protein L30 (RPL30), mRNA Length = 524 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 gccaacatagcatagtactc 309 |||||||||||||||||||| Sbjct: 270 gccaacatagcatagtactc 251
>ref|XM_519874.1| PREDICTED: Pan troglodytes similar to ribosomal protein L30 (LOC464302), mRNA Length = 551 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 gccaacatagcatagtactc 309 |||||||||||||||||||| Sbjct: 321 gccaacatagcatagtactc 302
>gb|AY432828.1| Aedes aegypti ASAP ID: 35483 cytosolic large ribosomal subunit L30 mRNA sequence Length = 704 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 290 gccaacatagcatagtactcaatctcggactt 321 ||||||||||| ||||| || ||||||||||| Sbjct: 634 gccaacatagcgtagtattcgatctcggactt 603
>gb|AY432180.1| Aedes aegypti ASAP ID: 34535 cytosolic large ribosomal subunit L30 mRNA sequence Length = 583 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 290 gccaacatagcatagtactcaatctcggactt 321 ||||||||||| ||||| || ||||||||||| Sbjct: 266 gccaacatagcgtagtattcgatctcggactt 235
>gb|DQ440259.1| Aedes aegypti clone AET-3168 60S ribosomal protein L30 mRNA, complete cds Length = 351 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 290 gccaacatagcatagtactcaatctcggactt 321 ||||||||||| ||||| || ||||||||||| Sbjct: 200 gccaacatagcgtagtattcgatctcggactt 169
>ref|XM_381296.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG01120.1) partial mRNA Length = 2964 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 gcgttgatgatgtcggagtc 189 |||||||||||||||||||| Sbjct: 2435 gcgttgatgatgtcggagtc 2416
>gb|AC133201.2| Mus musculus BAC clone RP23-74A8 from chromosome 3, complete sequence Length = 184783 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 121 cagacaagatactgaaaatg 140 |||||||||||||||||||| Sbjct: 16392 cagacaagatactgaaaatg 16373
>emb|AL032631.1|CEY106G6H Caenorhabditis elegans YAC Y106G6H, complete sequence Length = 48613 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 302 tagtactcaatctcggactt 321 |||||||||||||||||||| Sbjct: 9534 tagtactcaatctcggactt 9515
>gb|AY231694.1| Drosophila yakuba clone yak-em_CG10652 mRNA sequence Length = 333 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 290 gccaacatagcatagtactcaatctcggactt 321 |||| |||||| |||||||| ||||||||||| Sbjct: 200 gccagcatagcgtagtactcgatctcggactt 169
>gb|AC136138.30| Medicago truncatula clone mth2-8f9, complete sequence Length = 128267 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 aaatggcacacaggtttact 155 |||||||||||||||||||| Sbjct: 90481 aaatggcacacaggtttact 90462
>ref|XM_504315.1| Yarrowia lipolytica CLIB122, YALI0E23562g predicted mRNA Length = 330 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 302 tagtactcaatctcggactt 321 |||||||||||||||||||| Sbjct: 185 tagtactcaatctcggactt 166
>ref|XM_966740.1| PREDICTED: Tribolium castaneum similar to CG8779-PA (LOC660515), mRNA Length = 3774 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 343 agcaaggatcactagctttg 362 |||||||||||||||||||| Sbjct: 2836 agcaaggatcactagctttg 2817
>gb|DQ455172.1| Medicago truncatula cDNA-AFLP fragment BC31M21_102 sequence Length = 367 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 437 agcttgttgttgatgttgtc 456 |||||||||||||||||||| Sbjct: 300 agcttgttgttgatgttgtc 319
>gb|BC095426.1| Homo sapiens ribosomal protein L30, mRNA (cDNA clone MGC:110963 IMAGE:30792764), complete cds Length = 515 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 gccaacatagcatagtactc 309 |||||||||||||||||||| Sbjct: 264 gccaacatagcatagtactc 245
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 433 ctgcagcttgttgttgatgt 452 |||||||||||||||||||| Sbjct: 1620667 ctgcagcttgttgttgatgt 1620648
>dbj|AK128768.1| Homo sapiens cDNA FLJ45223 fis, clone BRCAN2020050 Length = 1991 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 gccaacatagcatagtactc 309 |||||||||||||||||||| Sbjct: 970 gccaacatagcatagtactc 951
>gb|AY118425.1| Drosophila melanogaster RH09938 full insert cDNA Length = 497 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 221 cggaagtatttaccacaggc 240 |||||||||||||||||||| Sbjct: 327 cggaagtatttaccacaggc 308 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 290 gccaacatagcatagtactcaatctcggactt 321 |||| |||||| |||||||| ||||||||||| Sbjct: 258 gccagcatagcgtagtactcgatctcggactt 227
>emb|CR594202.1| full-length cDNA clone CS0DI020YO18 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 484 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 gccaacatagcatagtactc 309 |||||||||||||||||||| Sbjct: 256 gccaacatagcatagtactc 237
>ref|NM_165271.1| Drosophila melanogaster Ribosomal protein L30 CG10652-RB, transcript variant B (RpL30), mRNA Length = 493 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 221 cggaagtatttaccacaggc 240 |||||||||||||||||||| Sbjct: 322 cggaagtatttaccacaggc 303 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 290 gccaacatagcatagtactcaatctcggactt 321 |||| |||||| |||||||| ||||||||||| Sbjct: 253 gccagcatagcgtagtactcgatctcggactt 222
>ref|NM_079948.2| Drosophila melanogaster Ribosomal protein L30 CG10652-RA, transcript variant A (RpL30), mRNA Length = 472 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 221 cggaagtatttaccacaggc 240 |||||||||||||||||||| Sbjct: 301 cggaagtatttaccacaggc 282 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 290 gccaacatagcatagtactcaatctcggactt 321 |||| |||||| |||||||| ||||||||||| Sbjct: 232 gccagcatagcgtagtactcgatctcggactt 201
>gb|AY071208.1| Drosophila melanogaster RE25263 full length cDNA Length = 473 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 221 cggaagtatttaccacaggc 240 |||||||||||||||||||| Sbjct: 323 cggaagtatttaccacaggc 304 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 290 gccaacatagcatagtactcaatctcggactt 321 |||| |||||| |||||||| ||||||||||| Sbjct: 254 gccagcatagcgtagtactcgatctcggactt 223
>gb|AC025155.20| Homo sapiens 3 BAC RP11-487M24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 40307 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 223 gaagtatttaccacaggcag 242 |||||||||||||||||||| Sbjct: 433 gaagtatttaccacaggcag 452
>gb|AY857445.1| Suberites domuncula L30 mRNA, complete cds Length = 357 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 398 tagccgagcgtgtacttgccactcttcatgac 429 ||||| || |||||||| |||||||||||||| Sbjct: 95 tagcccagagtgtactttccactcttcatgac 64
>emb|X79238.1|HSRPL30 Homo sapiens mRNA for ribosomal protein L30 Length = 357 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 gccaacatagcatagtactc 309 |||||||||||||||||||| Sbjct: 200 gccaacatagcatagtactc 181
>ref|NM_060327.3| Caenorhabditis elegans Ribosomal Protein, Large subunit family member (rpl-30) (rpl-30) mRNA, complete cds Length = 377 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 302 tagtactcaatctcggactt 321 |||||||||||||||||||| Sbjct: 188 tagtactcaatctcggactt 169
>emb|AL113420.1|CNS01AUS Botrytis cinerea strain T4 cDNA library Length = 696 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 432 gctgcagcttgttgttgatgttgt 455 ||||||||||||||||| |||||| Sbjct: 74 gctgcagcttgttgttgctgttgt 51
>gb|AC009205.6|AC009205 Drosophila melanogaster, chromosome 2L, region 36E-37C, BAC clone BACR04C20, complete sequence Length = 166918 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 290 gccaacatagcatagtactcaatctcggactt 321 |||| |||||| |||||||| ||||||||||| Sbjct: 48026 gccagcatagcgtagtactcgatctcggactt 48057 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 cggaagtatttaccacaggc 240 |||||||||||||||||||| Sbjct: 47957 cggaagtatttaccacaggc 47976
>gb|AC011756.5|AC011756 Drosophila melanogaster, chromosome 2L, region 36E-37C, BAC clone BACR17A06, complete sequence Length = 170546 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 290 gccaacatagcatagtactcaatctcggactt 321 |||| |||||| |||||||| ||||||||||| Sbjct: 133594 gccagcatagcgtagtactcgatctcggactt 133625 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 cggaagtatttaccacaggc 240 |||||||||||||||||||| Sbjct: 133525 cggaagtatttaccacaggc 133544
>gb|DQ000503.1| Synthetic construct clone PSF:62177 RPL30 gene, complete cds Length = 414 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 gccaacatagcatagtactc 309 |||||||||||||||||||| Sbjct: 233 gccaacatagcatagtactc 214
>gb|AC069410.10| Homo sapiens 3 BAC RP11-32M21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 176924 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 223 gaagtatttaccacaggcag 242 |||||||||||||||||||| Sbjct: 148731 gaagtatttaccacaggcag 148750
>gb|AY891374.1| Synthetic construct Homo sapiens clone FLH116523.01L ribosomal protein L30 (RPL30) mRNA, partial cds Length = 348 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 gccaacatagcatagtactc 309 |||||||||||||||||||| Sbjct: 200 gccaacatagcatagtactc 181
>gb|AY888717.1| Synthetic construct Homo sapiens clone FLH116527.01X ribosomal protein L30 (RPL30) mRNA, complete cds Length = 348 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 gccaacatagcatagtactc 309 |||||||||||||||||||| Sbjct: 200 gccaacatagcatagtactc 181
>dbj|AK026528.1| Homo sapiens cDNA: FLJ22875 fis, clone KAT02879 Length = 1483 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 gccaacatagcatagtactc 309 |||||||||||||||||||| Sbjct: 1231 gccaacatagcatagtactc 1212
>gb|BC032700.2| Homo sapiens ribosomal protein L30, mRNA (cDNA clone MGC:44855 IMAGE:5393199), complete cds Length = 483 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 gccaacatagcatagtactc 309 |||||||||||||||||||| Sbjct: 243 gccaacatagcatagtactc 224
>emb|CT573365.4| M.truncatula DNA sequence from clone MTH2-89E15 on chromosome 3, complete sequence Length = 123679 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 437 agcttgttgttgatgttgtc 456 |||||||||||||||||||| Sbjct: 73793 agcttgttgttgatgttgtc 73812
>emb|AL929452.9| Mouse DNA sequence from clone RP23-345L15 on chromosome X, complete sequence Length = 221920 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 taaatgatgtacacaagaccaaat 75 ||||||||||||| |||||||||| Sbjct: 43814 taaatgatgtacagaagaccaaat 43791
>gb|AE003661.3| Drosophila melanogaster chromosome 2L, section 70 of 83 of the complete sequence Length = 265558 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 290 gccaacatagcatagtactcaatctcggactt 321 |||| |||||| |||||||| ||||||||||| Sbjct: 98732 gccagcatagcgtagtactcgatctcggactt 98763 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 cggaagtatttaccacaggc 240 |||||||||||||||||||| Sbjct: 98663 cggaagtatttaccacaggc 98682
>gb|L05095.1|HUMRIBPROF Homo sapiens ribosomal protein L30 mRNA, complete cds Length = 477 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 gccaacatagcatagtactc 309 |||||||||||||||||||| Sbjct: 254 gccaacatagcatagtactc 235
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 302 tagtactcaatctcggactt 321 |||||||||||||||||||| Sbjct: 2781472 tagtactcaatctcggactt 2781491
>emb|AL132988.4|CNS01DTW Human chromosome 14 DNA sequence BAC R-320M16 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 157962 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 122 agacaagatactgaaaatggcaca 145 |||||||||||||||| ||||||| Sbjct: 32529 agacaagatactgaaattggcaca 32506
>dbj|AP003352.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1208A12 Length = 187349 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 gccaacatagcatagtactc 309 |||||||||||||||||||| Sbjct: 139633 gccaacatagcatagtactc 139652
>dbj|AB070559.1| Homo sapiens RPL30 and U72 genes for ribosomal protein L30 and U72 snoRNA, complete cds and sequence Length = 5880 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 gccaacatagcatagtactc 309 |||||||||||||||||||| Sbjct: 3814 gccaacatagcatagtactc 3795 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,851,949 Number of Sequences: 3902068 Number of extensions: 3851949 Number of successful extensions: 81604 Number of sequences better than 10.0: 120 Number of HSP's better than 10.0 without gapping: 120 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 81203 Number of HSP's gapped (non-prelim): 388 length of query: 480 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 458 effective length of database: 17,147,199,772 effective search space: 7853417495576 effective search space used: 7853417495576 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
