ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal1k19
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1OL502_MOUSE (Q8VG09) Olfactory receptor 502 (Olfactory receptor ... 32 0.86
2DNAJ_BLOFL (Q7VQL3) Chaperone protein dnaJ 31 1.9
3OL469_MOUSE (Q8VF66) Olfactory receptor 469 (Olfactory receptor ... 31 2.5
4OL470_MOUSE (Q8VF65) Olfactory receptor 470 (Olfactory receptor ... 30 5.6
5OL493_MOUSE (Q8VEW5) Olfactory receptor 493 (Olfactory receptor ... 29 7.3
6DNAJ_RHILO (Q98DD2) Chaperone protein dnaJ 29 7.3
7OR4A5_HUMAN (Q8NH83) Olfactory receptor 4A5 (Olfactory receptor ... 29 7.3
8DIAC_RAT (Q01460) Di-N-acetylchitobiase precursor (EC 3.2.1.-) 29 9.5

>OL502_MOUSE (Q8VG09) Olfactory receptor 502 (Olfactory receptor 204-8)|
          Length = 314

 Score = 32.3 bits (72), Expect = 0.86
 Identities = 15/48 (31%), Positives = 25/48 (52%)
 Frame = -1

Query: 162 LVQLNFLGSSVCLKVRVLSSVSNSFCIASYMLMXXGLAICGPRRLIHF 19
           L+  N + + VC+++ V S +      +S+ L    L  CGP R+ HF
Sbjct: 133 LLYSNKMSTQVCVQLLVGSYIGGFLNASSFTLSFFSLVFCGPNRVNHF 180



to top

>DNAJ_BLOFL (Q7VQL3) Chaperone protein dnaJ|
          Length = 377

 Score = 31.2 bits (69), Expect = 1.9
 Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
 Frame = -1

Query: 504 CCGNGSSPRRHLISYGDCTRHGVVNARNGFWKLIASLP---GHG 382
           C G+G+     ++S   C  HG +  R GF+ +  S P   GHG
Sbjct: 147 CRGSGAKSSASIVSCVTCHGHGQIQMRQGFFSVQQSCPSCNGHG 190



to top

>OL469_MOUSE (Q8VF66) Olfactory receptor 469 (Olfactory receptor 204-21)|
          Length = 314

 Score = 30.8 bits (68), Expect = 2.5
 Identities = 13/42 (30%), Positives = 23/42 (54%)
 Frame = -1

Query: 144 LGSSVCLKVRVLSSVSNSFCIASYMLMXXGLAICGPRRLIHF 19
           + + VC+++ V S +      +S++L    L  CGP R+ HF
Sbjct: 139 MSTQVCIQLLVGSYIGGFLNASSFLLSFFPLLFCGPNRVNHF 180



to top

>OL470_MOUSE (Q8VF65) Olfactory receptor 470 (Olfactory receptor 204-22)|
          Length = 314

 Score = 29.6 bits (65), Expect = 5.6
 Identities = 12/42 (28%), Positives = 23/42 (54%)
 Frame = -1

Query: 144 LGSSVCLKVRVLSSVSNSFCIASYMLMXXGLAICGPRRLIHF 19
           + + VC+++ V S +      +S++L    L  CGP R+ H+
Sbjct: 139 MSTQVCIQLLVGSYIGGFLNASSFLLSFFPLLFCGPNRVNHY 180



to top

>OL493_MOUSE (Q8VEW5) Olfactory receptor 493 (Olfactory receptor 204-35)|
          Length = 314

 Score = 29.3 bits (64), Expect = 7.3
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = -1

Query: 144 LGSSVCLKVRVLSSVSNSFCIASYMLMXXGLAICGPRRLIHF 19
           + + VC+++ V S +      +S+ L       CGP R+ HF
Sbjct: 139 MSTQVCIQLIVGSYIGGFLNASSFTLFFLSFLFCGPNRINHF 180



to top

>DNAJ_RHILO (Q98DD2) Chaperone protein dnaJ|
          Length = 376

 Score = 29.3 bits (64), Expect = 7.3
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = -1

Query: 504 CCGNGSSPRRHLISYGDCTRHGVVNARNGFWKLIASLP 391
           C G+G+ P    ++   C  HG V A  GF+ +  + P
Sbjct: 149 CSGSGAKPGTQPVTCSMCHGHGKVRATQGFFSIERTCP 186



to top

>OR4A5_HUMAN (Q8NH83) Olfactory receptor 4A5 (Olfactory receptor OR11-111)|
          Length = 315

 Score = 29.3 bits (64), Expect = 7.3
 Identities = 12/45 (26%), Positives = 24/45 (53%)
 Frame = -1

Query: 153 LNFLGSSVCLKVRVLSSVSNSFCIASYMLMXXGLAICGPRRLIHF 19
           L  +   VC  + V++ +   F  +++ ++   L ICGP  ++HF
Sbjct: 131 LTIMNRQVCFLLLVVAMIGG-FVHSAFQIVVYSLPICGPNVIVHF 174



to top

>DIAC_RAT (Q01460) Di-N-acetylchitobiase precursor (EC 3.2.1.-)|
          Length = 367

 Score = 28.9 bits (63), Expect = 9.5
 Identities = 21/76 (27%), Positives = 30/76 (39%)
 Frame = -1

Query: 513 SECCCGNGSSPRRHLISYGDCTRHGVVNARNGFWKLIASLPGHGYYFWCACWR*FIKLAL 334
           SEC     +   + L  YGD  R G+        KL+  +P +GY + C         A+
Sbjct: 202 SECIAAANAPYNQTLTGYGDYLRMGISPR-----KLVMGIPWYGYDYICLNLSKDDVCAI 256

Query: 333 GERISR*GPCSHVQYH 286
            +   R  PCS    H
Sbjct: 257 AKVPFRGAPCSDAAGH 272


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 74,410,352
Number of Sequences: 219361
Number of extensions: 1454427
Number of successful extensions: 2758
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2692
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2757
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4200495993
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top