ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags29o21
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_189556.2| Oryza sativa (japonica cultivar-group), mRNA 208 1e-50
2dbj|AK100676.1| Oryza sativa (japonica cultivar-group) cDNA clon... 208 1e-50
3dbj|AK122040.1| Oryza sativa (japonica cultivar-group) cDNA clon... 194 2e-46
4gb|BT018784.1| Zea mays clone EL01N0527D07.d mRNA sequence 168 1e-38
5gb|AY103680.1| Zea mays PCO080984 mRNA sequence 127 4e-26
6dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 94 6e-16
7gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome... 94 6e-16
8dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 76 1e-10
9dbj|AP003118.2| Oryza sativa (japonica cultivar-group) genomic D... 76 1e-10
10dbj|AP003047.2| Oryza sativa (japonica cultivar-group) genomic D... 76 1e-10
11ref|NM_180653.1| Arabidopsis thaliana ATP binding AT1G79920 tran... 50 0.008
12ref|NM_106641.3| Arabidopsis thaliana ATP binding AT1G79920 tran... 50 0.008
13gb|BT000810.1| Arabidopsis thaliana At1g79920 mRNA sequence 50 0.008
14gb|AY065177.1| Arabidopsis thaliana putative heat-shock protein ... 50 0.008
15gb|CP000024.1| Streptococcus thermophilus CNRZ1066, complete genome 46 0.12
16gb|AC153571.14| Mus musculus 10 BAC RP23-309H16 (Roswell Park Ca... 46 0.12
17gb|CP000023.1| Streptococcus thermophilus LMG 18311, complete ge... 46 0.12
18gb|AC018489.7| Drosophila melanogaster clone BACR19G19, complete... 44 0.48
19gb|AC011717.6|AC011717 Arabidopsis thaliana chromosome 1 BAC F19... 44 0.48
20gb|AE003503.4| Drosophila melanogaster chromosome X, section 55 ... 44 0.48
21emb|CR626909.11| Zebrafish DNA sequence from clone DKEY-78D3 in ... 44 0.48
22gb|AC131747.5| Mus musculus BAC clone RP23-36O24 from chromosome... 42 1.9
23ref|XM_513540.1| PREDICTED: Pan troglodytes similar to kynurenin... 42 1.9
24gb|AC164974.2| Pan troglodytes BAC clone CH251-565G22 from chrom... 42 1.9
25ref|NM_019610.3| Homo sapiens RNA binding motif protein, X-linke... 42 1.9
26gb|AF039043.1| Caenorhabditis elegans cosmid F39C12, complete se... 42 1.9
27emb|AL592309.24| Human DNA sequence from clone RP11-293F5 on chr... 42 1.9
28emb|AL139416.5| Human DNA sequence from clone RP4-531M19 on chro... 42 1.9
29emb|AL136167.8| Human DNA sequence from clone RP1-299I16 on chro... 42 1.9
30emb|AL832554.1|HSM803863 Homo sapiens mRNA; cDNA DKFZp547N1117 (... 42 1.9
31emb|CR936801.1| Homo sapiens mRNA; cDNA DKFZp781E1948 (from clon... 42 1.9
32ref|NM_076424.2| Caenorhabditis elegans F39C12.1 (F39C12.1) mRNA... 42 1.9
33gb|BC012942.1| Homo sapiens RNA binding motif protein, X-linked-... 42 1.9
34gb|AC107068.3| Homo sapiens BAC clone RP11-121C2 from 4, complet... 42 1.9
35ref|NM_153834.3| Homo sapiens G protein-coupled receptor 112 (GP... 42 1.9
36gb|AY140954.1| Homo sapiens G-protein coupled receptor GPR112 (G... 42 1.9
37gb|AC129557.10| Mus musculus chromosome 19, clone RP24-245F23, c... 42 1.9
38gb|AY882585.1| Homo sapiens G protein-coupled receptor 112 (GPR1... 42 1.9
39gb|DQ120655.1| Cercopithecus sabaeus RBM1 gene, partial cds 42 1.9
40gb|DQ120654.1| Hylobates lar RBM1 gene, partial cds 42 1.9
41gb|DQ120653.1| Pongo pygmaeus RBM1 gene, partial cds 42 1.9
42gb|DQ120652.1| Gorilla gorilla RBM1 gene, partial cds 42 1.9
43gb|DQ120651.1| Pan troglodytes RBM1 gene, partial cds 42 1.9
44gb|DQ120650.1| Homo sapiens RBM1 gene, partial cds 42 1.9
45gb|AY726636.1| Xenopus laevis Brg1 mRNA, complete cds 40 7.5
46gb|BC106223.1| Xenopus laevis cDNA clone MGC:130651 IMAGE:739167... 40 7.5
47ref|XM_613004.2| PREDICTED: Bos taurus similar to UPF3 regulator... 40 7.5
48gb|AY723745.1| Hepatitis E virus isolate IND-SW-00-01, complete ... 40 7.5
49ref|NM_011546.1| Mus musculus zinc finger homeobox 1a (Zfhx1a), ... 40 7.5
50emb|CT010522.7| Mouse DNA sequence from clone RP23-310H3 on chro... 40 7.5
51gb|AC134834.3| Mus musculus BAC clone RP24-320P15 from chromosom... 40 7.5
52gb|AC138619.4| Mus musculus BAC clone RP23-278M16 from chromosom... 40 7.5
53gb|AC111103.7| Mus musculus chromosome 16, clone RP23-187G7, com... 40 7.5
54gb|AC153529.7| Mus musculus 10 BAC RP23-239G23 (Roswell Park Can... 40 7.5
55emb|AL354996.9| Human DNA sequence from clone RP11-478H12 on chr... 40 7.5
56gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome 40 7.5
57gb|AC022145.8| Homo sapiens chromosome 19 clone CTD-2579N5, comp... 40 7.5
58gb|AC104635.12| Homo sapiens 3 BAC RP11-567G11 (Roswell Park Can... 40 7.5
59gb|AC010617.8| Homo sapiens chromosome 19 clone CTD-2607J13, com... 40 7.5
60gb|AC104444.2| Homo sapiens chromosome 3 clone RP11-420K5, compl... 40 7.5
61dbj|AK154720.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 40 7.5
62gb|AC093581.2| Homo sapiens chromosome 1 clone RP11-22M7, comple... 40 7.5
63gb|AC025765.6| Homo sapiens chromosome 5 clone CTB-57H20, comple... 40 7.5
64gb|AC154586.2| Mus musculus BAC clone RP23-362L12 from chromosom... 40 7.5
65dbj|AK077901.1| Mus musculus 13 days embryo male testis cDNA, RI... 40 7.5
66dbj|AK084643.1| Mus musculus 13 days embryo heart cDNA, RIKEN fu... 40 7.5
67gb|AC008696.6|AC008696 Homo sapiens chromosome 5 clone CTB-70D19... 40 7.5
68ref|NM_066804.2| Caenorhabditis elegans K03H1.5 (K03H1.5) mRNA, ... 40 7.5
69gb|AY950549.1| Streptococcus pneumoniae strain 14893 penicillin ... 40 7.5
70gb|AY762376.1| Xenopus laevis Brg1 (Brg1) mRNA, complete cds 40 7.5
71gb|AC159114.7| Mus musculus BAC RP23-370L19 (Roswell Park Cance... 40 7.5
72gb|AC133183.3| Mus musculus BAC clone RP24-185O19 from chromosom... 40 7.5
73gb|AC092058.3| Homo sapiens chromosome 3 clone RP11-667E17, comp... 40 7.5
74gb|AC073895.22| Homo sapiens 3 BAC RP11-622L21 (Roswell Park Can... 40 7.5
75gb|AC093350.15| Mus musculus chromosome 3, clone RP23-16G3, comp... 40 7.5
76gb|AC153373.4| Mus musculus 6 BAC RP23-100J14 (Roswell Park Canc... 40 7.5
77gb|AC125099.3| Mus musculus BAC clone RP24-201C14 from 3, comple... 40 7.5
78emb|AL133224.4|CNS01DU9 Human chromosome 14 DNA sequence BAC R-1... 40 7.5
79emb|AL935044.6| Zebrafish DNA sequence from clone CH211-190O19, ... 40 7.5
80gb|AC153605.2| Mus musculus 6 BAC RP23-346H23 (Roswell Park Canc... 40 7.5
81emb|AL611952.9| Mouse DNA sequence from clone RP23-70K18 on chro... 40 7.5
82gb|U26259.1|MMU26259 Mus musculus C2-H2 zinc finger protein mRNA... 40 7.5
83dbj|D76432.1| Mouse mRNA for transcriptional repressor deltaEF1,... 40 7.5 
>ref|NM_189556.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3139

 Score =  208 bits (105), Expect = 1e-50
 Identities = 337/416 (81%)
 Strand = Plus / Minus

                                                                        
Query: 131  acttccacttcctcctcttccagcatcgttgctgattcaagagagactatcccatggatg 190
            ||||||||||||||||| |||| ||| |||||||||||||  | ||| | ||||||||||
Sbjct: 1716 acttccacttcctcctcctccaacattgttgctgattcaactgtgaccaccccatggatg 1657

                                                                        
Query: 191  ttgaggcgaactttcactttcagtttagccttctcacctttgctagattggaaagggccg 250
            || ||||| ||||||||||||||||| || || ||||||||||  |  | |||||| || 
Sbjct: 1656 ttaaggcggactttcactttcagtttcgctttgtcacctttgccgggattgaaaggacca 1597

                                                                        
Query: 251  atcgtgtaagtgctaattttgtgtgttatttgcaaatcatctgtgtcaacattcaaaaca 310
            | |||||||||||| || ||  ||| ||||||||||||| | || ||||||| |   |||
Sbjct: 1596 accgtgtaagtgctgatctttggtgatatttgcaaatcaccagtatcaacatacgtgaca 1537

                                                                        
Query: 311  tccactgcaaatgtactggacctatagaaggtcagagccttgatgctaggcattggattc 370
            || |||  ||||||| ||||||||||||||||||  || || | ||| |||| ||| || 
Sbjct: 1536 tctacttgaaatgtattggacctatagaaggtcaatgctttaacgctgggcaatgggtta 1477

                                                                        
Query: 371  cccttggggaatacaacagtttgntgggattcattgncctgagcatctggcttccatgat 430
            |||||||||||||||||||| || |||   |||     |||||  ||||| |||||||| 
Sbjct: 1476 cccttggggaatacaacagtctgttggttatcaccattctgagagtctggtttccatgac 1417

                                                                        
Query: 431  aaagcaactgaaaaaggaaaaccttcattaacctgaaactnccgcactttaaatgtcgng 490
            |  |||| ||| ||||| ||||| ||||||||||||||||  ||||||||||| || |  
Sbjct: 1416 attgcaattgagaaagggaaaccatcattaacctgaaactctcgcactttaaaagtggga 1357

                                                                    
Query: 491  ctaagaatagcacactggagagcacattcnctggcaacacattcacttgcattcat 546
            ||||| ||||||||||  || |||||| | ||||||||||||||||| ||||||||
Sbjct: 1356 ctaaggatagcacactccagcgcacatcccctggcaacacattcactcgcattcat 1301



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 68   ggtgcatcatctgtctccat 87
            ||||||||||||||||||||
Sbjct: 1779 ggtgcatcatctgtctccat 1760
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>dbj|AK100676.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023113C17, full
            insert sequence
          Length = 3139

 Score =  208 bits (105), Expect = 1e-50
 Identities = 337/416 (81%)
 Strand = Plus / Minus

                                                                        
Query: 131  acttccacttcctcctcttccagcatcgttgctgattcaagagagactatcccatggatg 190
            ||||||||||||||||| |||| ||| |||||||||||||  | ||| | ||||||||||
Sbjct: 1716 acttccacttcctcctcctccaacattgttgctgattcaactgtgaccaccccatggatg 1657

                                                                        
Query: 191  ttgaggcgaactttcactttcagtttagccttctcacctttgctagattggaaagggccg 250
            || ||||| ||||||||||||||||| || || ||||||||||  |  | |||||| || 
Sbjct: 1656 ttaaggcggactttcactttcagtttcgctttgtcacctttgccgggattgaaaggacca 1597

                                                                        
Query: 251  atcgtgtaagtgctaattttgtgtgttatttgcaaatcatctgtgtcaacattcaaaaca 310
            | |||||||||||| || ||  ||| ||||||||||||| | || ||||||| |   |||
Sbjct: 1596 accgtgtaagtgctgatctttggtgatatttgcaaatcaccagtatcaacatacgtgaca 1537

                                                                        
Query: 311  tccactgcaaatgtactggacctatagaaggtcagagccttgatgctaggcattggattc 370
            || |||  ||||||| ||||||||||||||||||  || || | ||| |||| ||| || 
Sbjct: 1536 tctacttgaaatgtattggacctatagaaggtcaatgctttaacgctgggcaatgggtta 1477

                                                                        
Query: 371  cccttggggaatacaacagtttgntgggattcattgncctgagcatctggcttccatgat 430
            |||||||||||||||||||| || |||   |||     |||||  ||||| |||||||| 
Sbjct: 1476 cccttggggaatacaacagtctgttggttatcaccattctgagagtctggtttccatgac 1417

                                                                        
Query: 431  aaagcaactgaaaaaggaaaaccttcattaacctgaaactnccgcactttaaatgtcgng 490
            |  |||| ||| ||||| ||||| ||||||||||||||||  ||||||||||| || |  
Sbjct: 1416 attgcaattgagaaagggaaaccatcattaacctgaaactctcgcactttaaaagtggga 1357

                                                                    
Query: 491  ctaagaatagcacactggagagcacattcnctggcaacacattcacttgcattcat 546
            ||||| ||||||||||  || |||||| | ||||||||||||||||| ||||||||
Sbjct: 1356 ctaaggatagcacactccagcgcacatcccctggcaacacattcactcgcattcat 1301



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 68   ggtgcatcatctgtctccat 87
            ||||||||||||||||||||
Sbjct: 1779 ggtgcatcatctgtctccat 1760
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>dbj|AK122040.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033113E02, full
            insert sequence
          Length = 3137

 Score =  194 bits (98), Expect = 2e-46
 Identities = 396/497 (79%), Gaps = 3/497 (0%)
 Strand = Plus / Minus

                                                                        
Query: 52   agaagcagggtcctgtggtgcatcatctgtctccattgnagtagcatcctttggcacctc 111
            ||||||||||||   | ||||||||||||| ||||||  |||| |||||||| |   |||
Sbjct: 1761 agaagcagggtcacctagtgcatcatctgtatccattttagtatcatcctttagtgtctc 1702

                                                                        
Query: 112  actcatagatgaaaccggnacttccacttcctcctcttccagcatcgttgctgattcaag 171
            | |  ||| ||  ||||| || ||||||||||||||   ||||||| |||||||||||| 
Sbjct: 1701 atttgtagttgctaccggaacatccacttcctcctc---cagcatcattgctgattcaat 1645

                                                                        
Query: 172  agagactatcccatggatgttgaggcgaactttcactttcagtttagccttctcaccttt 231
            |||||||||||||||||||||||| |   ||||||| |||| ||| |||||||||  |||
Sbjct: 1644 agagactatcccatggatgttgagacatgctttcacattcacttttgccttctcaggttt 1585

                                                                        
Query: 232  gctagattggaaagggccgatcgtgtaagtgctaattttgtgtgttatttgcaaatcatc 291
            ||| |||||||||||||| || || || | ||| ||||| |  |  ||||||||||||||
Sbjct: 1584 gctggattggaaagggccaattgtataggagctgatttttttagccatttgcaaatcatc 1525

                                                                        
Query: 292  tgtgtcaacattcaaaacatccactgcaaatgtactggacctatagaaggtcagagcctt 351
            ||  || ||| ||| ||| || |||||||||||| |||||||||||||||||| ||  ||
Sbjct: 1524 tgcatcgacactcacaacgtctactgcaaatgtattggacctatagaaggtcacagtttt 1465

                                                                        
Query: 352  gatgctaggcattggattccccttggggaatacaacagtttgntgggattcattgncctg 411
            |   ||||| | |||| | || || ||||| || | ||| || | ||||||| ||  || 
Sbjct: 1464 ggcactagggactggacttccttttgggaacacgatagtctgttcggattcagtgttctc 1405

                                                                        
Query: 412  agcatctggcttccatgataaagcaactgaaaaaggaaaaccttcattaacctgaaactn 471
            || ||| || || ||||| ||||||| |||||| || || || ||||| |||| ||| | 
Sbjct: 1404 agaatccggtttgcatgacaaagcaattgaaaacgggaacccatcattgacctcaaattc 1345

                                                                        
Query: 472  ccgcactttaaatgtcgngctaagaatagcacactggagagcacattcnctggcaacaca 531
            ||| ||||| || || | |||||||| ||||||||| ||||| ||| | | |||||||||
Sbjct: 1344 ccggactttgaaagtggggctaagaacagcacactgaagagcgcatccccgggcaacaca 1285

                             
Query: 532  ttcacttgcattcatag 548
            |||||||||||||||||
Sbjct: 1284 ttcacttgcattcatag 1268
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>gb|BT018784.1| Zea mays clone EL01N0527D07.d mRNA sequence
          Length = 2082

 Score =  168 bits (85), Expect = 1e-38
 Identities = 323/404 (79%)
 Strand = Plus / Minus

                                                                       
Query: 143 tcctcttccagcatcgttgctgattcaagagagactatcccatggatgttgaggcgaact 202
           ||||| ||||||||| | ||||| ||||  | ||| ||||| ||||||||||| || |||
Sbjct: 764 tcctcctccagcatcatagctgaatcaactgtgacaatcccgtggatgttgagacgcact 705

                                                                       
Query: 203 ttcactttcagtttagccttctcacctttgctagattggaaagggccgatcgtgtaagtg 262
           || ||||||||||| ||| |||||||||||   | ||||||||| || || |||||||||
Sbjct: 704 ttaactttcagtttggccctctcacctttggagggttggaaaggtccaattgtgtaagtg 645

                                                                       
Query: 263 ctaattttgtgtgttatttgcaaatcatctgtgtcaacattcaaaacatccactgcaaat 322
           || || || ||||  |||||| | ||   |||||| |||| ||||||||| ||| |||||
Sbjct: 644 cttatcttctgtggaatttgcgagtcgcatgtgtccacatacaaaacatcaacttcaaat 585

                                                                       
Query: 323 gtactggacctatagaaggtcagagccttgatgctaggcattggattccccttggggaat 382
           ||||||||  |||||||||| ||||| || ||||| || |||  ||||||||| || |||
Sbjct: 584 gtactggatttatagaaggttagagctttaatgctgggaattacattcccctttggaaat 525

                                                                       
Query: 383 acaacagtttgntgggattcattgncctgagcatctggcttccatgataaagcaactgaa 442
           ||||  || || |||| | || ||  ||| |  ||| | |||||||| || |||| ||| 
Sbjct: 524 acaagggtctgttggggtgcactgttctgcgagtcttgtttccatgacaatgcaattgag 465

                                                                       
Query: 443 aaaggaaaaccttcattaacctgaaactnccgcactttaaatgtcgngctaagaatagca 502
           |||||||| || ||||||||||| || | ||||||||| || || | ||| |||||||||
Sbjct: 464 aaaggaaacccatcattaacctggaattcccgcactttgaaagtggggctgagaatagca 405

                                                       
Query: 503 cactggagagcacattcnctggcaacacattcacttgcattcat 546
           ||||||||||||||  | |  |||||||| || |||||||||||
Sbjct: 404 cactggagagcacagccccgcgcaacacactcgcttgcattcat 361
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>gb|AY103680.1| Zea mays PCO080984 mRNA sequence
          Length = 1931

 Score =  127 bits (64), Expect = 4e-26
 Identities = 180/219 (82%)
 Strand = Plus / Minus

                                                                       
Query: 180 tcccatggatgttgaggcgaactttcactttcagtttagccttctcacctttgctagatt 239
           |||||||||||||||| || ||||||||||||||||| |||||||| ||||||   | ||
Sbjct: 557 tcccatggatgttgagacgcactttcactttcagtttggccttctctcctttggaggttt 498

                                                                       
Query: 240 ggaaagggccgatcgtgtaagtgctaattttgtgtgttatttgcaaatcatctgtgtcaa 299
           |||||||||| || ||||| ||||| ||||| ||||  ||||| ||  | | || ||| |
Sbjct: 497 ggaaagggccaattgtgtatgtgcttattttttgtggaatttgtaagccgtttgggtcga 438

                                                                       
Query: 300 cattcaaaacatccactgcaaatgtactggacctatagaaggtcagagccttgatgctag 359
           ||| ||||||||| ||| |||||||||||||  || ||||||| ||| | ||  ||||||
Sbjct: 437 catacaaaacatcaacttcaaatgtactggatttaaagaaggtaagaactttagtgctag 378

                                                  
Query: 360 gcattggattccccttggggaatacaacagtttgntggg 398
           | |||| ||||||||| ||||||||||  ||||| ||||
Sbjct: 377 gaattgcattcccctttgggaatacaagggtttgttggg 339



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 104/125 (83%)
 Strand = Plus / Minus

                                                                       
Query: 422 ttccatgataaagcaactgaaaaaggaaaaccttcattaacctgaaactnccgcacttta 481
           |||||||| || |||| ||| |||||||| || ||||||||||| || |  |||||||| 
Sbjct: 318 ttccatgacaatgcaattgagaaaggaaacccatcattaacctggaattctcgcactttg 259

                                                                       
Query: 482 aatgtcgngctaagaatagcacactggagagcacattcnctggcaacacattcacttgca 541
           || || | ||| |||||||||||||| ||||||||| | |  |||||||| |||||||||
Sbjct: 258 aaagtggggctgagaatagcacactgaagagcacatcctcgcgcaacacactcacttgca 199

                
Query: 542 ttcat 546
           |||||
Sbjct: 198 ttcat 194
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 80/91 (87%)
 Strand = Plus / Minus

                                                                           
Query: 159     ttgctgattcaagagagactatcccatggatgttgaggcgaactttcactttcagtttag 218
               |||||||||||| |||||||||||||||||||||||| |   ||||||| |||| ||| |
Sbjct: 4822522 ttgctgattcaatagagactatcccatggatgttgagacatgctttcacattcacttttg 4822463

                                              
Query: 219     ccttctcacctttgctagattggaaagggcc 249
               ||||||||  |||||| ||||||||||||||
Sbjct: 4822462 ccttctcaggtttgctggattggaaagggcc 4822432



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                          
Query: 490     gctaagaatagcacactggagagcacattcnctggcaacacattcacttgcattcatag 548
               |||||||| ||||||||| ||||| ||| | | ||||||||||||||||||||||||||
Sbjct: 4821228 gctaagaacagcacactgaagagcgcatccccgggcaacacattcacttgcattcatag 4821170



 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 59/67 (88%)
 Strand = Plus / Minus

                                                                           
Query: 278     atttgcaaatcatctgtgtcaacattcaaaacatccactgcaaatgtactggacctatag 337
               ||||||||||||||||  || ||| ||| ||| || |||||||||||| |||||||||||
Sbjct: 4822296 atttgcaaatcatctgcatcgacactcacaacgtctactgcaaatgtattggacctatag 4822237

                      
Query: 338     aaggtca 344
               |||||||
Sbjct: 4822236 aaggtca 4822230



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                                   
Query: 52      agaagcagggtcctgtggtgcatcatctgtctccattgnagtagcatccttt 103
               ||||||||||||   | ||||||||||||| ||||||  |||| ||||||||
Sbjct: 4822711 agaagcagggtcacctagtgcatcatctgtatccattttagtatcatccttt 4822660
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>gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0453H11,
             complete sequence
          Length = 187956

 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 80/91 (87%)
 Strand = Plus / Minus

                                                                         
Query: 159   ttgctgattcaagagagactatcccatggatgttgaggcgaactttcactttcagtttag 218
             |||||||||||| |||||||||||||||||||||||| |   ||||||| |||| ||| |
Sbjct: 94930 ttgctgattcaatagagactatcccatggatgttgagacatgctttcacattcacttttg 94871

                                            
Query: 219   ccttctcacctttgctagattggaaagggcc 249
             ||||||||  |||||| ||||||||||||||
Sbjct: 94870 ccttctcaggtttgctggattggaaagggcc 94840



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                        
Query: 490   gctaagaatagcacactggagagcacattcnctggcaacacattcacttgcattcatag 548
             |||||||| ||||||||| ||||| ||| | | ||||||||||||||||||||||||||
Sbjct: 93636 gctaagaacagcacactgaagagcgcatccccgggcaacacattcacttgcattcatag 93578



 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 59/67 (88%)
 Strand = Plus / Minus

                                                                         
Query: 278   atttgcaaatcatctgtgtcaacattcaaaacatccactgcaaatgtactggacctatag 337
             ||||||||||||||||  || ||| ||| ||| || |||||||||||| |||||||||||
Sbjct: 94704 atttgcaaatcatctgcatcgacactcacaacgtctactgcaaatgtattggacctatag 94645

                    
Query: 338   aaggtca 344
             |||||||
Sbjct: 94644 aaggtca 94638



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                                 
Query: 52    agaagcagggtcctgtggtgcatcatctgtctccattgnagtagcatccttt 103
             ||||||||||||   | ||||||||||||| ||||||  |||| ||||||||
Sbjct: 95119 agaagcagggtcacctagtgcatcatctgtatccattttagtatcatccttt 95068
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 113/138 (81%)
 Strand = Plus / Minus

                                                                           
Query: 253     cgtgtaagtgctaattttgtgtgttatttgcaaatcatctgtgtcaacattcaaaacatc 312
               |||||||||||| || ||  ||| ||||||||||||| | || ||||||| |   |||||
Sbjct: 4255735 cgtgtaagtgctgatctttggtgatatttgcaaatcaccagtatcaacatacgtgacatc 4255676

                                                                           
Query: 313     cactgcaaatgtactggacctatagaaggtcagagccttgatgctaggcattggattccc 372
                |||  ||||||| ||||||||||||||||||  || || | ||| |||| ||| || ||
Sbjct: 4255675 tacttgaaatgtattggacctatagaaggtcaatgctttaacgctgggcaatgggttacc 4255616

                                 
Query: 373     cttggggaatacaacagt 390
               ||||||||||||||||||
Sbjct: 4255615 cttggggaatacaacagt 4255598



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 73/86 (84%)
 Strand = Plus / Minus

                                                                           
Query: 461     acctgaaactnccgcactttaaatgtcgngctaagaatagcacactggagagcacattcn 520
               ||||||||||  ||||||||||| || |  ||||| ||||||||||  || |||||| | 
Sbjct: 4254655 acctgaaactctcgcactttaaaagtgggactaaggatagcacactccagcgcacatccc 4254596

                                         
Query: 521     ctggcaacacattcacttgcattcat 546
               ||||||||||||||||| ||||||||
Sbjct: 4254595 ctggcaacacattcactcgcattcat 4254570



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 66/76 (86%)
 Strand = Plus / Minus

                                                                           
Query: 158     gttgctgattcaagagagactatcccatggatgttgaggcgaactttcactttcagttta 217
               |||||||||||||  | ||| | |||||||||||| ||||| ||||||||||||||||| 
Sbjct: 4255936 gttgctgattcaactgtgaccaccccatggatgttaaggcggactttcactttcagtttc 4255877

                               
Query: 218     gccttctcacctttgc 233
               || || ||||||||||
Sbjct: 4255876 gctttgtcacctttgc 4255861



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 68      ggtgcatcatctgtctccat 87
               ||||||||||||||||||||
Sbjct: 4256122 ggtgcatcatctgtctccat 4256103
to top
>dbj|AP003118.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OJ1174_D05
          Length = 128525

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 113/138 (81%)
 Strand = Plus / Minus

                                                                         
Query: 253   cgtgtaagtgctaattttgtgtgttatttgcaaatcatctgtgtcaacattcaaaacatc 312
             |||||||||||| || ||  ||| ||||||||||||| | || ||||||| |   |||||
Sbjct: 93702 cgtgtaagtgctgatctttggtgatatttgcaaatcaccagtatcaacatacgtgacatc 93643

                                                                         
Query: 313   cactgcaaatgtactggacctatagaaggtcagagccttgatgctaggcattggattccc 372
              |||  ||||||| ||||||||||||||||||  || || | ||| |||| ||| || ||
Sbjct: 93642 tacttgaaatgtattggacctatagaaggtcaatgctttaacgctgggcaatgggttacc 93583

                               
Query: 373   cttggggaatacaacagt 390
             ||||||||||||||||||
Sbjct: 93582 cttggggaatacaacagt 93565



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 73/86 (84%)
 Strand = Plus / Minus

                                                                         
Query: 461   acctgaaactnccgcactttaaatgtcgngctaagaatagcacactggagagcacattcn 520
             ||||||||||  ||||||||||| || |  ||||| ||||||||||  || |||||| | 
Sbjct: 92622 acctgaaactctcgcactttaaaagtgggactaaggatagcacactccagcgcacatccc 92563

                                       
Query: 521   ctggcaacacattcacttgcattcat 546
             ||||||||||||||||| ||||||||
Sbjct: 92562 ctggcaacacattcactcgcattcat 92537



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 66/76 (86%)
 Strand = Plus / Minus

                                                                         
Query: 158   gttgctgattcaagagagactatcccatggatgttgaggcgaactttcactttcagttta 217
             |||||||||||||  | ||| | |||||||||||| ||||| ||||||||||||||||| 
Sbjct: 93903 gttgctgattcaactgtgaccaccccatggatgttaaggcggactttcactttcagtttc 93844

                             
Query: 218   gccttctcacctttgc 233
             || || ||||||||||
Sbjct: 93843 gctttgtcacctttgc 93828



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 68    ggtgcatcatctgtctccat 87
             ||||||||||||||||||||
Sbjct: 94089 ggtgcatcatctgtctccat 94070
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>dbj|AP003047.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0666G04
          Length = 141983

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 113/138 (81%)
 Strand = Plus / Minus

                                                                         
Query: 253   cgtgtaagtgctaattttgtgtgttatttgcaaatcatctgtgtcaacattcaaaacatc 312
             |||||||||||| || ||  ||| ||||||||||||| | || ||||||| |   |||||
Sbjct: 35505 cgtgtaagtgctgatctttggtgatatttgcaaatcaccagtatcaacatacgtgacatc 35446

                                                                         
Query: 313   cactgcaaatgtactggacctatagaaggtcagagccttgatgctaggcattggattccc 372
              |||  ||||||| ||||||||||||||||||  || || | ||| |||| ||| || ||
Sbjct: 35445 tacttgaaatgtattggacctatagaaggtcaatgctttaacgctgggcaatgggttacc 35386

                               
Query: 373   cttggggaatacaacagt 390
             ||||||||||||||||||
Sbjct: 35385 cttggggaatacaacagt 35368



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 73/86 (84%)
 Strand = Plus / Minus

                                                                         
Query: 461   acctgaaactnccgcactttaaatgtcgngctaagaatagcacactggagagcacattcn 520
             ||||||||||  ||||||||||| || |  ||||| ||||||||||  || |||||| | 
Sbjct: 34425 acctgaaactctcgcactttaaaagtgggactaaggatagcacactccagcgcacatccc 34366

                                       
Query: 521   ctggcaacacattcacttgcattcat 546
             ||||||||||||||||| ||||||||
Sbjct: 34365 ctggcaacacattcactcgcattcat 34340



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 66/76 (86%)
 Strand = Plus / Minus

                                                                         
Query: 158   gttgctgattcaagagagactatcccatggatgttgaggcgaactttcactttcagttta 217
             |||||||||||||  | ||| | |||||||||||| ||||| ||||||||||||||||| 
Sbjct: 35706 gttgctgattcaactgtgaccaccccatggatgttaaggcggactttcactttcagtttc 35647

                             
Query: 218   gccttctcacctttgc 233
             || || ||||||||||
Sbjct: 35646 gctttgtcacctttgc 35631



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 68    ggtgcatcatctgtctccat 87
             ||||||||||||||||||||
Sbjct: 35892 ggtgcatcatctgtctccat 35873
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>ref|NM_180653.1| Arabidopsis thaliana ATP binding AT1G79920 transcript variant
            AT1G79920.1 mRNA, complete cds
          Length = 2941

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 82/101 (81%)
 Strand = Plus / Minus

                                                                        
Query: 131  acttccacttcctcctcttccagcatcgttgctgattcaagagagactatcccatggatg 190
            ||||| ||||| ||||||||||  |  ||||||||||||| |||||| || ||||| | |
Sbjct: 1663 acttcaacttcttcctcttccaaaagagttgctgattcaacagagacaattccatgcagg 1604

                                                     
Query: 191  ttgaggcgaactttcactttcagtttagccttctcaccttt 231
            || |  | ||||||||||||||| || ||| |||| |||||
Sbjct: 1603 ttcaatctaactttcactttcagctttgccctctcgccttt 1563
to top
>ref|NM_106641.3| Arabidopsis thaliana ATP binding AT1G79920 transcript variant
            AT1G79920.2 mRNA, complete cds
          Length = 2941

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 82/101 (81%)
 Strand = Plus / Minus

                                                                        
Query: 131  acttccacttcctcctcttccagcatcgttgctgattcaagagagactatcccatggatg 190
            ||||| ||||| ||||||||||  |  ||||||||||||| |||||| || ||||| | |
Sbjct: 1663 acttcaacttcttcctcttccaaaagagttgctgattcaacagagacaattccatgcagg 1604

                                                     
Query: 191  ttgaggcgaactttcactttcagtttagccttctcaccttt 231
            || |  | ||||||||||||||| || ||| |||| |||||
Sbjct: 1603 ttcaatctaactttcactttcagctttgccctctcgccttt 1563
to top
>gb|BT000810.1| Arabidopsis thaliana At1g79920 mRNA sequence
          Length = 2952

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 82/101 (81%)
 Strand = Plus / Minus

                                                                        
Query: 131  acttccacttcctcctcttccagcatcgttgctgattcaagagagactatcccatggatg 190
            ||||| ||||| ||||||||||  |  ||||||||||||| |||||| || ||||| | |
Sbjct: 1656 acttcaacttcttcctcttccaaaagagttgctgattcaacagagacaattccatgcagg 1597

                                                     
Query: 191  ttgaggcgaactttcactttcagtttagccttctcaccttt 231
            || |  | ||||||||||||||| || ||| |||| |||||
Sbjct: 1596 ttcaatctaactttcactttcagctttgccctctcgccttt 1556
to top
>gb|AY065177.1| Arabidopsis thaliana putative heat-shock protein (At1g79920;
            F19K16.12) mRNA, complete cds
          Length = 2850

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 82/101 (81%)
 Strand = Plus / Minus

                                                                        
Query: 131  acttccacttcctcctcttccagcatcgttgctgattcaagagagactatcccatggatg 190
            ||||| ||||| ||||||||||  |  ||||||||||||| |||||| || ||||| | |
Sbjct: 1663 acttcaacttcttcctcttccaaaagagttgctgattcaacagagacaattccatgcagg 1604

                                                     
Query: 191  ttgaggcgaactttcactttcagtttagccttctcaccttt 231
            || |  | ||||||||||||||| || ||| |||| |||||
Sbjct: 1603 ttcaatctaactttcactttcagctttgccctctcgccttt 1563
to top
>gb|CP000024.1| Streptococcus thermophilus CNRZ1066, complete genome
          Length = 1796226

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 427     tgataaagcaactgaaaaaggaa 449
               |||||||||||||||||||||||
Sbjct: 1355237 tgataaagcaactgaaaaaggaa 1355215
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>gb|AC153571.14| Mus musculus 10 BAC RP23-309H16 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 184967

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 45    cagcactagaagcagggtcctgt 67
             |||||||||||||||||||||||
Sbjct: 97753 cagcactagaagcagggtcctgt 97731
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>gb|CP000023.1| Streptococcus thermophilus LMG 18311, complete genome
          Length = 1796846

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 427     tgataaagcaactgaaaaaggaa 449
               |||||||||||||||||||||||
Sbjct: 1347597 tgataaagcaactgaaaaaggaa 1347575
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>gb|AC018489.7| Drosophila melanogaster clone BACR19G19, complete sequence
          Length = 179077

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 263   ctaattttgtgtgttatttgca 284
             ||||||||||||||||||||||
Sbjct: 65089 ctaattttgtgtgttatttgca 65068
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>gb|AC011717.6|AC011717 Arabidopsis thaliana chromosome 1 BAC F19K16 genomic sequence, complete
             sequence
          Length = 111301

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 61/74 (82%)
 Strand = Plus / Minus

                                                                         
Query: 158   gttgctgattcaagagagactatcccatggatgttgaggcgaactttcactttcagttta 217
             ||||||||||||| |||||| || ||||| | ||| |  | ||||||||||||||| || 
Sbjct: 43650 gttgctgattcaacagagacaattccatgcaggttcaatctaactttcactttcagcttt 43591

                           
Query: 218   gccttctcaccttt 231
             ||| |||| |||||
Sbjct: 43590 gccctctcgccttt 43577
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>gb|AE003503.4| Drosophila melanogaster chromosome X, section 55 of 74 of the complete
              sequence
          Length = 300468

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 263    ctaattttgtgtgttatttgca 284
              ||||||||||||||||||||||
Sbjct: 266936 ctaattttgtgtgttatttgca 266957
to top
>emb|CR626909.11| Zebrafish DNA sequence from clone DKEY-78D3 in linkage group 15,
             complete sequence
          Length = 96878

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 258   aagtgctaattttgtgtgttat 279
             ||||||||||||||||||||||
Sbjct: 30356 aagtgctaattttgtgtgttat 30377
to top
>gb|AC131747.5| Mus musculus BAC clone RP23-36O24 from chromosome 14, complete sequence
          Length = 212930

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 137   acttcctcctcttccagcatc 157
             |||||||||||||||||||||
Sbjct: 70215 acttcctcctcttccagcatc 70195
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>ref|XM_513540.1| PREDICTED: Pan troglodytes similar to kynurenine aminotransferase III
            (LOC456999), mRNA
          Length = 4467

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 134  tccacttcctcctcttccagc 154
            |||||||||||||||||||||
Sbjct: 1311 tccacttcctcctcttccagc 1291
to top
>gb|AC164974.2| Pan troglodytes BAC clone CH251-565G22 from chromosome 4, complete
              sequence
          Length = 210224

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 268    tttgtgtgttatttgcaaatc 288
              |||||||||||||||||||||
Sbjct: 133917 tttgtgtgttatttgcaaatc 133937
to top
>ref|NM_019610.3| Homo sapiens RNA binding motif protein, X-linked-like 1 (RBMXL1),
           mRNA
          Length = 3877

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 134 tccacttcctcctcttccagc 154
           |||||||||||||||||||||
Sbjct: 840 tccacttcctcctcttccagc 820
to top
>gb|AF039043.1| Caenorhabditis elegans cosmid F39C12, complete sequence
          Length = 40233

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 132   cttccacttcctcctcttcca 152
             |||||||||||||||||||||
Sbjct: 12164 cttccacttcctcctcttcca 12184
to top
>emb|AL592309.24| Human DNA sequence from clone RP11-293F5 on chromosome 1 Contains a
             novel gene, a novel pseudogene, a novel gene similar to
             heparan sulfate 6-O-sulfotransferase 1 (HS6ST1), a
             pseudogene similar to part of a novel gene, the gene for a
             hypothetical protein AE2, a profilin 1 (PFN1) pseudogene,
             the 5' end of the ALPL gene for alkaline phosphatase,
             liver/bone/kidney and a CpG island, complete sequence
          Length = 206231

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 436   aactgaaaaaggaaaaccttc 456
             |||||||||||||||||||||
Sbjct: 82973 aactgaaaaaggaaaaccttc 82953
to top
>emb|AL139416.5| Human DNA sequence from clone RP4-531M19 on chromosome 1 Contains the
            5' end of the gene for a novel protein (FLJ32614), the
            gene for a novel protein similar to X-linked RNA binding
            motif protein (RBMX) (DKFZp547N1117), the 3' end of the
            GBP3 gene for guanylate binding protein 3 and a CpG
            island, complete sequence
          Length = 34250

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 134  tccacttcctcctcttccagc 154
            |||||||||||||||||||||
Sbjct: 6357 tccacttcctcctcttccagc 6377
to top
>emb|AL136167.8| Human DNA sequence from clone RP1-299I16 on chromosome Xq26.1-27.3
             Contains part of the GPR112 gene for G protein-coupled
             receptor 112, complete sequence
          Length = 63946

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 305   aaaacatccactgcaaatgta 325
             |||||||||||||||||||||
Sbjct: 21046 aaaacatccactgcaaatgta 21026
to top
>emb|AL832554.1|HSM803863 Homo sapiens mRNA; cDNA DKFZp547N1117 (from clone DKFZp547N1117)
          Length = 4857

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 134 tccacttcctcctcttccagc 154
           |||||||||||||||||||||
Sbjct: 820 tccacttcctcctcttccagc 800
to top
>emb|CR936801.1| Homo sapiens mRNA; cDNA DKFZp781E1948 (from clone DKFZp781E1948)
          Length = 8971

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 305 aaaacatccactgcaaatgta 325
           |||||||||||||||||||||
Sbjct: 488 aaaacatccactgcaaatgta 468
to top
>ref|NM_076424.2| Caenorhabditis elegans F39C12.1 (F39C12.1) mRNA, complete cds
          Length = 15429

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 132  cttccacttcctcctcttcca 152
            |||||||||||||||||||||
Sbjct: 4579 cttccacttcctcctcttcca 4559
to top
>gb|BC012942.1| Homo sapiens RNA binding motif protein, X-linked-like 1, mRNA (cDNA
           clone MGC:9398 IMAGE:3875565), complete cds
          Length = 3678

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 134 tccacttcctcctcttccagc 154
           |||||||||||||||||||||
Sbjct: 626 tccacttcctcctcttccagc 606
to top
>gb|AC107068.3| Homo sapiens BAC clone RP11-121C2 from 4, complete sequence
          Length = 181804

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 268   tttgtgtgttatttgcaaatc 288
             |||||||||||||||||||||
Sbjct: 48640 tttgtgtgttatttgcaaatc 48620
to top
>ref|NM_153834.3| Homo sapiens G protein-coupled receptor 112 (GPR112), mRNA
          Length = 9931

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 305  aaaacatccactgcaaatgta 325
            |||||||||||||||||||||
Sbjct: 1244 aaaacatccactgcaaatgta 1224
to top
>gb|AY140954.1| Homo sapiens G-protein coupled receptor GPR112 (GPR112) mRNA,
           complete cds
          Length = 8400

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 305 aaaacatccactgcaaatgta 325
           |||||||||||||||||||||
Sbjct: 761 aaaacatccactgcaaatgta 741
to top
>gb|AC129557.10| Mus musculus chromosome 19, clone RP24-245F23, complete sequence
          Length = 174415

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 521   ctggcaacacattcacttgcattca 545
             |||||||||||||||||| ||||||
Sbjct: 28015 ctggcaacacattcactttcattca 27991
to top
>gb|AY882585.1| Homo sapiens G protein-coupled receptor 112 (GPR112) mRNA, complete
            cds
          Length = 9931

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 305  aaaacatccactgcaaatgta 325
            |||||||||||||||||||||
Sbjct: 1244 aaaacatccactgcaaatgta 1224
to top
>gb|DQ120655.1| Cercopithecus sabaeus RBM1 gene, partial cds
          Length = 1155

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 134 tccacttcctcctcttccagc 154
           |||||||||||||||||||||
Sbjct: 351 tccacttcctcctcttccagc 331
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>gb|DQ120654.1| Hylobates lar RBM1 gene, partial cds
          Length = 1155

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 134 tccacttcctcctcttccagc 154
           |||||||||||||||||||||
Sbjct: 351 tccacttcctcctcttccagc 331
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>gb|DQ120653.1| Pongo pygmaeus RBM1 gene, partial cds
          Length = 1155

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 134 tccacttcctcctcttccagc 154
           |||||||||||||||||||||
Sbjct: 351 tccacttcctcctcttccagc 331
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>gb|DQ120652.1| Gorilla gorilla RBM1 gene, partial cds
          Length = 1155

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 134 tccacttcctcctcttccagc 154
           |||||||||||||||||||||
Sbjct: 351 tccacttcctcctcttccagc 331
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>gb|DQ120651.1| Pan troglodytes RBM1 gene, partial cds
          Length = 1155

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 134 tccacttcctcctcttccagc 154
           |||||||||||||||||||||
Sbjct: 351 tccacttcctcctcttccagc 331
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>gb|DQ120650.1| Homo sapiens RBM1 gene, partial cds
          Length = 1152

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 134 tccacttcctcctcttccagc 154
           |||||||||||||||||||||
Sbjct: 351 tccacttcctcctcttccagc 331
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>gb|AY726636.1| Xenopus laevis Brg1 mRNA, complete cds
          Length = 5031

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 132  cttccacttcctcctcttcc 151
            ||||||||||||||||||||
Sbjct: 4701 cttccacttcctcctcttcc 4682
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>gb|BC106223.1| Xenopus laevis cDNA clone MGC:130651 IMAGE:7391671, complete cds
          Length = 1090

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 215 ttagccttctcacctttgct 234
           ||||||||||||||||||||
Sbjct: 600 ttagccttctcacctttgct 581
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>ref|XM_613004.2| PREDICTED: Bos taurus similar to UPF3 regulator of nonsense
            transcripts homolog B isoform 2 (LOC540761), mRNA
          Length = 1580

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 199  aactttcactttcagtttag 218
            ||||||||||||||||||||
Sbjct: 1313 aactttcactttcagtttag 1332
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>gb|AY723745.1| Hepatitis E virus isolate IND-SW-00-01, complete genome
          Length = 7262

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 103  tggcacctcactcatagatg 122
            ||||||||||||||||||||
Sbjct: 3311 tggcacctcactcatagatg 3330
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>ref|NM_011546.1| Mus musculus zinc finger homeobox 1a (Zfhx1a), mRNA
          Length = 5214

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 132  cttccacttcctcctcttcc 151
            ||||||||||||||||||||
Sbjct: 3212 cttccacttcctcctcttcc 3193
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>emb|CT010522.7| Mouse DNA sequence from clone RP23-310H3 on chromosome 16, complete
             sequence
          Length = 169798

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 210   tcagtttagccttctcacct 229
             ||||||||||||||||||||
Sbjct: 44241 tcagtttagccttctcacct 44260
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>gb|AC134834.3| Mus musculus BAC clone RP24-320P15 from chromosome 18, complete sequence
          Length = 169143

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 132    cttccacttcctcctcttcc 151
              ||||||||||||||||||||
Sbjct: 163869 cttccacttcctcctcttcc 163888
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>gb|AC138619.4| Mus musculus BAC clone RP23-278M16 from chromosome 18, complete
             sequence
          Length = 170250

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 132   cttccacttcctcctcttcc 151
             ||||||||||||||||||||
Sbjct: 53604 cttccacttcctcctcttcc 53585
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>gb|AC111103.7| Mus musculus chromosome 16, clone RP23-187G7, complete sequence
          Length = 222348

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 210   tcagtttagccttctcacct 229
             ||||||||||||||||||||
Sbjct: 72568 tcagtttagccttctcacct 72549
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>gb|AC153529.7| Mus musculus 10 BAC RP23-239G23 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 153084

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 277   tatttgcaaatcatctgtgt 296
             ||||||||||||||||||||
Sbjct: 83939 tatttgcaaatcatctgtgt 83958
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>emb|AL354996.9| Human DNA sequence from clone RP11-478H12 on chromosome 13, complete
             sequence
          Length = 54981

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 210   tcagtttagccttctcacct 229
             ||||||||||||||||||||
Sbjct: 34347 tcagtttagccttctcacct 34328
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>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome
          Length = 3665893

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 156    tcgttgctgattcaagagag 175
              ||||||||||||||||||||
Sbjct: 982971 tcgttgctgattcaagagag 982990
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>gb|AC022145.8| Homo sapiens chromosome 19 clone CTD-2579N5, complete sequence
          Length = 174994

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 176    actatcccatggatgttgag 195
              ||||||||||||||||||||
Sbjct: 115657 actatcccatggatgttgag 115638
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>gb|AC104635.12| Homo sapiens 3 BAC RP11-567G11 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 66672

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 210   tcagtttagccttctcacct 229
             ||||||||||||||||||||
Sbjct: 27353 tcagtttagccttctcacct 27372
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>gb|AC010617.8| Homo sapiens chromosome 19 clone CTD-2607J13, complete sequence
          Length = 101166

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 176   actatcccatggatgttgag 195
             ||||||||||||||||||||
Sbjct: 33916 actatcccatggatgttgag 33935
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>gb|AC104444.2| Homo sapiens chromosome 3 clone RP11-420K5, complete sequence
          Length = 161054

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 210   tcagtttagccttctcacct 229
             ||||||||||||||||||||
Sbjct: 32367 tcagtttagccttctcacct 32348
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>dbj|AK154720.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
            full-length enriched library, clone:F630104H16
            product:sepiapterin reductase, full insert sequence
          Length = 3551

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 132  cttccacttcctcctcttcc 151
            ||||||||||||||||||||
Sbjct: 3328 cttccacttcctcctcttcc 3347
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>gb|AC093581.2| Homo sapiens chromosome 1 clone RP11-22M7, complete sequence
          Length = 156992

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 210   tcagtttagccttctcacct 229
             ||||||||||||||||||||
Sbjct: 77693 tcagtttagccttctcacct 77712
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>gb|AC025765.6| Homo sapiens chromosome 5 clone CTB-57H20, complete sequence
          Length = 218515

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 451    accttcattaacctgaaact 470
              ||||||||||||||||||||
Sbjct: 216306 accttcattaacctgaaact 216287
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>gb|AC154586.2| Mus musculus BAC clone RP23-362L12 from chromosome 16, complete sequence
          Length = 224155

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 416    tctggcttccatgataaagc 435
              ||||||||||||||||||||
Sbjct: 158519 tctggcttccatgataaagc 158538
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>dbj|AK077901.1| Mus musculus 13 days embryo male testis cDNA, RIKEN full-length
           enriched library, clone:6030430B05 product:zinc finger
           homeobox 1a, full insert sequence
          Length = 1651

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 132 cttccacttcctcctcttcc 151
           ||||||||||||||||||||
Sbjct: 485 cttccacttcctcctcttcc 466
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>dbj|AK084643.1| Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched
            library, clone:D330024O10 product:unclassifiable, full
            insert sequence
          Length = 2469

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 277  tatttgcaaatcatctgtgt 296
            ||||||||||||||||||||
Sbjct: 1436 tatttgcaaatcatctgtgt 1455
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>gb|AC008696.6|AC008696 Homo sapiens chromosome 5 clone CTB-70D19, complete sequence
          Length = 155666

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 451  accttcattaacctgaaact 470
            ||||||||||||||||||||
Sbjct: 1737 accttcattaacctgaaact 1718
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>ref|NM_066804.2| Caenorhabditis elegans K03H1.5 (K03H1.5) mRNA, complete cds
          Length = 4275

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 433 agcaactgaaaaaggaaaac 452
           ||||||||||||||||||||
Sbjct: 119 agcaactgaaaaaggaaaac 138
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>gb|AY950549.1| Streptococcus pneumoniae strain 14893 penicillin binding protein
            (pbp2x) gene, partial cds
          Length = 1629

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 346  agccttgatgctaggcattg 365
            ||||||||||||||||||||
Sbjct: 1413 agccttgatgctaggcattg 1394
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>gb|AY762376.1| Xenopus laevis Brg1 (Brg1) mRNA, complete cds
          Length = 5487

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 132  cttccacttcctcctcttcc 151
            ||||||||||||||||||||
Sbjct: 4714 cttccacttcctcctcttcc 4695
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>gb|AC159114.7| Mus musculus  BAC RP23-370L19 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 169393

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 277    tatttgcaaatcatctgtgt 296
              ||||||||||||||||||||
Sbjct: 131123 tatttgcaaatcatctgtgt 131104
to top
>gb|AC133183.3| Mus musculus BAC clone RP24-185O19 from chromosome 12, complete sequence
          Length = 182948

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 132    cttccacttcctcctcttcc 151
              ||||||||||||||||||||
Sbjct: 131526 cttccacttcctcctcttcc 131545
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>gb|AC092058.3| Homo sapiens chromosome 3 clone RP11-667E17, complete sequence
          Length = 200898

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 210   tcagtttagccttctcacct 229
             ||||||||||||||||||||
Sbjct: 43082 tcagtttagccttctcacct 43101
to top
>gb|AC073895.22| Homo sapiens 3 BAC RP11-622L21 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 167311

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 210   tcagtttagccttctcacct 229
             ||||||||||||||||||||
Sbjct: 40858 tcagtttagccttctcacct 40839
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>gb|AC093350.15| Mus musculus chromosome 3, clone RP23-16G3, complete sequence
          Length = 200326

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 21    tagcagcagcctcagcagga 40
             ||||||||||||||||||||
Sbjct: 31543 tagcagcagcctcagcagga 31562
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>gb|AC153373.4| Mus musculus 6 BAC RP23-100J14 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 218409

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 132   cttccacttcctcctcttcc 151
             ||||||||||||||||||||
Sbjct: 40606 cttccacttcctcctcttcc 40625
to top
>gb|AC125099.3| Mus musculus BAC clone RP24-201C14 from 3, complete sequence
          Length = 166720

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 21    tagcagcagcctcagcagga 40
             ||||||||||||||||||||
Sbjct: 69150 tagcagcagcctcagcagga 69131
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>emb|AL133224.4|CNS01DU9 Human chromosome 14 DNA sequence BAC R-16G17 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 187385

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 210   tcagtttagccttctcacct 229
             ||||||||||||||||||||
Sbjct: 97131 tcagtttagccttctcacct 97150
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>emb|AL935044.6| Zebrafish DNA sequence from clone CH211-190O19, complete sequence
          Length = 155612

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 199   aactttcactttcagtttag 218
             ||||||||||||||||||||
Sbjct: 61566 aactttcactttcagtttag 61547
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>gb|AC153605.2| Mus musculus 6 BAC RP23-346H23 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 229744

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 132   cttccacttcctcctcttcc 151
             ||||||||||||||||||||
Sbjct: 13653 cttccacttcctcctcttcc 13634
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>emb|AL611952.9| Mouse DNA sequence from clone RP23-70K18 on chromosome 4, complete
             sequence
          Length = 89500

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 132   cttccacttcctcctcttcc 151
             ||||||||||||||||||||
Sbjct: 26882 cttccacttcctcctcttcc 26901
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>gb|U26259.1|MMU26259 Mus musculus C2-H2 zinc finger protein mRNA, complete cds
          Length = 5237

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 132  cttccacttcctcctcttcc 151
            ||||||||||||||||||||
Sbjct: 3229 cttccacttcctcctcttcc 3210
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>dbj|D76432.1| Mouse mRNA for transcriptional repressor deltaEF1, complete cds
          Length = 5214

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 132  cttccacttcctcctcttcc 151
            ||||||||||||||||||||
Sbjct: 3212 cttccacttcctcctcttcc 3193


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,128,252
Number of Sequences: 3902068
Number of extensions: 5128252
Number of successful extensions: 124033
Number of sequences better than 10.0: 83
Number of HSP's better than 10.0 without gapping: 82
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 123771
Number of HSP's gapped (non-prelim): 247
length of query: 552
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 529
effective length of database: 17,143,297,704
effective search space: 9068804485416
effective search space used: 9068804485416
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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