ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags29o16 |
|---|---|
| Clone Library Name | barley_pub |
>DHX8_ARATH (Q38953) Probable pre-mRNA-splicing factor ATP-dependent RNA helicase| (EC 3.6.1.-) Length = 1168 Score = 343 bits (881), Expect = 2e-94 Identities = 161/173 (93%), Positives = 169/173 (97%) Frame = -2 Query: 664 LQVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMDRYKLDVVAAGKNFTKVRK 485 L VYEAWKAKNFSGPWCFENF+QSRSLRRAQDVRKQLL+IMD+YKLDVV AGKNFTK+RK Sbjct: 996 LAVYEAWKAKNFSGPWCFENFIQSRSLRRAQDVRKQLLSIMDKYKLDVVTAGKNFTKIRK 1055 Query: 484 AITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREV 305 AITAGFFFH ARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYH+LVMTTKEYMREV Sbjct: 1056 AITAGFFFHGARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHDLVMTTKEYMREV 1115 Query: 304 TVVDPKWLVELAPRFYKGADPTKMSKRKRQERIEPLYDRYHEPNSWRLSKRRA 146 TV+DPKWLVELAPRF+K +DPTKMSKRKRQERIEPLYDRYHEPNSWRLSKRRA Sbjct: 1116 TVIDPKWLVELAPRFFKVSDPTKMSKRKRQERIEPLYDRYHEPNSWRLSKRRA 1168
>DHX8_HUMAN (Q14562) ATP-dependent RNA helicase DHX8 (EC 3.6.1.-) (DEAH box| protein 8) (RNA helicase HRH1) Length = 1220 Score = 270 bits (689), Expect = 4e-72 Identities = 118/170 (69%), Positives = 150/170 (88%) Frame = -2 Query: 664 LQVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMDRYKLDVVAAGKNFTKVRK 485 L VY +WK FS PWC+ENF+Q+RSLRRAQD+RKQ+L IMDR+KLDVV+ GK+ +V+K Sbjct: 1046 LAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKSTVRVQK 1105 Query: 484 AITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREV 305 AI +GFF +AA+KDPQEGYRTL++ Q VYIHPSSALF RQP+WV+YHELV+TTKEYMREV Sbjct: 1106 AICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREV 1165 Query: 304 TVVDPKWLVELAPRFYKGADPTKMSKRKRQERIEPLYDRYHEPNSWRLSK 155 T +DP+WLVE AP F+K +DPTK+SK+K+Q+R+EPLY+RY EPN+WR+S+ Sbjct: 1166 TTIDPRWLVEFAPAFFKVSDPTKLSKQKKQQRLEPLYNRYEEPNAWRISR 1215
>MOG5_CAEEL (Q09530) Probable pre-mRNA-splicing factor ATP-dependent RNA helicase| mog-5 (EC 3.6.1.-) (Sex determination protein mog-5) (Masculinization of germ line protein 5) Length = 1200 Score = 244 bits (622), Expect = 2e-64 Identities = 108/170 (63%), Positives = 143/170 (84%) Frame = -2 Query: 664 LQVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMDRYKLDVVAAGKNFTKVRK 485 L VY +WK +FS PWCFENF+Q RS++RAQD+RKQLL IMDR+KL +V+ G++ ++V+K Sbjct: 1021 LAVYNSWKNHHFSQPWCFENFIQVRSMKRAQDIRKQLLGIMDRHKLLMVSCGRDVSRVQK 1080 Query: 484 AITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREV 305 AI +GFF +AA++DPQEGYRTL + Q VYIHPSSA FQ+QP+WV+YHELVMTTKEYMREV Sbjct: 1081 AICSGFFRNAAKRDPQEGYRTLTDGQNVYIHPSSACFQQQPEWVVYHELVMTTKEYMREV 1140 Query: 304 TVVDPKWLVELAPRFYKGADPTKMSKRKRQERIEPLYDRYHEPNSWRLSK 155 T +DPKWLVE AP F+K D TK+S KR ++I+PL+D+Y + N+WR+++ Sbjct: 1141 TAIDPKWLVEFAPSFFKIGDSTKLSTFKRNQKIDPLFDKYADANAWRITR 1190
>DHX8_SCHPO (O42643) Putative pre-mRNA-splicing factor ATP-dependent RNA helicase| C10F6.02c (EC 3.6.1.-) Length = 1168 Score = 196 bits (499), Expect = 4e-50 Identities = 85/173 (49%), Positives = 128/173 (73%), Gaps = 1/173 (0%) Frame = -2 Query: 664 LQVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMDRYKLDVVAAGKNFTKVRK 485 L VY WK S WC+E+++Q+R +RRA+DVRKQL+ +MDRY+ VV+ G+ + + Sbjct: 992 LNVYTTWKMNRCSDNWCYEHYIQARGMRRAEDVRKQLIRLMDRYRHPVVSCGRKRELILR 1051 Query: 484 AITAGFFFHAARKDPQEG-YRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMRE 308 A+ +G+F + A++D EG Y+T+VEN PVY+HPS LF + +WVIYHEL+ T+KEYM Sbjct: 1052 ALCSGYFTNVAKRDSHEGCYKTIVENAPVYMHPSGVLFGKAAEWVIYHELIQTSKEYMHT 1111 Query: 307 VTVVDPKWLVELAPRFYKGADPTKMSKRKRQERIEPLYDRYHEPNSWRLSKRR 149 V+ V+PKWLVE+AP F+K A+ ++SK K+ ++ PLY+R+ +P+ WR+SK+R Sbjct: 1112 VSTVNPKWLVEVAPTFFKFANANQVSKTKKNLKVLPLYNRFEKPDEWRISKQR 1164
>DHX16_PANTR (Q7YR39) Putative pre-mRNA-splicing factor ATP-dependent RNA helicase| DHX16 (EC 3.6.1.-) (DEAH-box protein 16) (ATP-dependent RNA helicase #3) Length = 1044 Score = 160 bits (404), Expect = 4e-39 Identities = 71/153 (46%), Positives = 110/153 (71%) Frame = -2 Query: 664 LQVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMDRYKLDVVAAGKNFTKVRK 485 L VY W +S WC+ENFVQ RS+RRA+DVR+QL +++R ++ + + ++ +VRK Sbjct: 885 LNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQGDYIRVRK 944 Query: 484 AITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREV 305 AITAG+F+H AR + GYRT+ + Q V+IHP+S+LF++QP W++YHELV+TTKE+MR+V Sbjct: 945 AITAGYFYHTARLT-RSGYRTVKQQQTVFIHPNSSLFEQQPRWLLYHELVLTTKEFMRQV 1003 Query: 304 TVVDPKWLVELAPRFYKGADPTKMSKRKRQERI 206 ++ WL+E+AP +YK + +K ++I Sbjct: 1004 LEIESSWLLEVAPHYYKAKELEDPHAKKMPKKI 1036
>DHX16_HUMAN (O60231) Putative pre-mRNA-splicing factor ATP-dependent RNA helicase| DHX16 (EC 3.6.1.-) (DEAH-box protein 16) (ATP-dependent RNA helicase #3) Length = 1041 Score = 160 bits (404), Expect = 4e-39 Identities = 71/153 (46%), Positives = 110/153 (71%) Frame = -2 Query: 664 LQVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMDRYKLDVVAAGKNFTKVRK 485 L VY W +S WC+ENFVQ RS+RRA+DVR+QL +++R ++ + + ++ +VRK Sbjct: 882 LNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQGDYIRVRK 941 Query: 484 AITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREV 305 AITAG+F+H AR + GYRT+ + Q V+IHP+S+LF++QP W++YHELV+TTKE+MR+V Sbjct: 942 AITAGYFYHTARLT-RSGYRTVKQQQTVFIHPNSSLFEQQPRWLLYHELVLTTKEFMRQV 1000 Query: 304 TVVDPKWLVELAPRFYKGADPTKMSKRKRQERI 206 ++ WL+E+AP +YK + +K ++I Sbjct: 1001 LEIESSWLLEVAPHYYKAKELEDPHAKKMPKKI 1033
>PRP22_YEAST (P24384) Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP22| (EC 3.6.1.-) Length = 1145 Score = 147 bits (370), Expect = 4e-35 Identities = 69/173 (39%), Positives = 114/173 (65%), Gaps = 1/173 (0%) Frame = -2 Query: 664 LQVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMDRYKLDVVAAGKNFTKVRK 485 L VY W+ N+S +C NF+ R L+RA+DV+ Q+ I + L +++ + +RK Sbjct: 964 LNVYTRWQQANYSEQYCKTNFLHFRHLKRARDVKSQISMIFKKIGLKLISCHSDPDLIRK 1023 Query: 484 AITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREV 305 +GFF +AA++D Q GY+T+ V IHPSS+L+ ++ ++V+YH +V+T++EYM +V Sbjct: 1024 TFVSGFFMNAAKRDSQVGYKTINGGTEVGIHPSSSLYGKEYEYVMYHSIVLTSREYMSQV 1083 Query: 304 TVVDPKWLVELAPRFYKGADPTKMSKRKRQERIEPLYDRY-HEPNSWRLSKRR 149 T ++P+WL+E+AP FYK D S++K +I PL++++ + NSWRLS R Sbjct: 1084 TSIEPQWLLEVAPHFYKAGDAESQSRKK--AKIIPLHNKFAKDQNSWRLSSIR 1134
>DHX16_CAEEL (O45244) Probable pre-mRNA-splicing factor ATP-dependent RNA helicase| mog-4 (EC 3.6.1.-) (Sex determination protein mog-4) (Masculinization of germ line protein 4) Length = 1008 Score = 137 bits (344), Expect = 4e-32 Identities = 59/148 (39%), Positives = 100/148 (67%) Frame = -2 Query: 664 LQVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMDRYKLDVVAAGKNFTKVRK 485 + VY W+ +FS WC EN+VQ R+++RA+DVR QL+ +++R +++ ++ K+RK Sbjct: 848 MNVYNKWQESSFSQRWCVENYVQHRTMKRARDVRDQLVGLLERVEIETKSSTDTI-KIRK 906 Query: 484 AITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREV 305 AITAG+F++ ++ D Y+T+ + HP+S LF+ P WV+Y ELV T+KE+MRE+ Sbjct: 907 AITAGYFYNVSKLDNTGHYKTVKHKHTTHPHPNSCLFEETPRWVVYFELVFTSKEFMREM 966 Query: 304 TVVDPKWLVELAPRFYKGADPTKMSKRK 221 + ++ WL+E+AP +YKG + + +K Sbjct: 967 SEIESGWLLEVAPHYYKGRELEDATNKK 994
>CDC28_SCHPO (Q10752) Putative ATP-dependent RNA helicase cdc28 (EC 3.6.1.-)| Length = 1055 Score = 135 bits (341), Expect = 9e-32 Identities = 64/161 (39%), Positives = 109/161 (67%), Gaps = 2/161 (1%) Frame = -2 Query: 685 GRSSYSTLQVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMDRYKLDVVA-AG 509 G + L ++ W +FS W ENF+Q +SL RA+DVR QL + +R ++++V + Sbjct: 894 GGDHLTLLHIWNEWVDTDFSYNWARENFLQYKSLCRARDVRDQLANLCERVEIELVTNSS 953 Query: 508 KNFTKVRKAITAGFFFHAARKDPQ-EGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVM 332 ++ ++KAITAG+F +AAR D + YRT+ NQ VYIHPSS++ +++P +IY ELV+ Sbjct: 954 ESLDPIKKAITAGYFSNAARLDRSGDSYRTVKSNQTVYIHPSSSVAEKKPKVIIYFELVL 1013 Query: 331 TTKEYMREVTVVDPKWLVELAPRFYKGADPTKMSKRKRQER 209 TTKEY R++T + P+WL+E++P ++K + ++ K +++ + Sbjct: 1014 TTKEYCRQITEIQPEWLLEISPHYFKPENIEELQKTQKRHK 1054
>PRP16_HUMAN (Q92620) Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16| (EC 3.6.1.-) (ATP-dependent RNA helicase DHX38) (DEAH box protein 38) Length = 1227 Score = 124 bits (311), Expect = 3e-28 Identities = 62/153 (40%), Positives = 95/153 (62%), Gaps = 4/153 (2%) Frame = -2 Query: 664 LQVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMDRYKLDVVAAGKNFTKVRK 485 L VY WK N+S WC ++F+ ++++R+ ++VR QL IM + ++ + + G ++ VRK Sbjct: 1012 LNVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCGTDWDIVRK 1071 Query: 484 AITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQR--QPDWVIYHELVMTTKEYMR 311 I A +F AA+ Y + P ++HP+S+LF PD+++YHELVMTTKEYM+ Sbjct: 1072 CICAAYFHQAAKLKGIGEYVNIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQ 1131 Query: 310 EVTVVDPKWLVELAPRFY--KGADPTKMSKRKR 218 VT VD +WL EL P FY K A ++ R+R Sbjct: 1132 CVTAVDGEWLAELGPMFYSVKQAGKSRQENRRR 1164
>MOG1_CAEEL (P34498) Probable pre-mRNA-splicing factor ATP-dependent RNA helicase| mog-1 (EC 3.6.1.-) (Sex determination protein mog-1) (Masculinization of germ line protein 1) Length = 1131 Score = 121 bits (304), Expect = 2e-27 Identities = 63/153 (41%), Positives = 91/153 (59%), Gaps = 2/153 (1%) Frame = -2 Query: 664 LQVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMDRYKLDVVAAGKNFTKVRK 485 L VY W+ +S WC +N++ ++L++ ++VR QL IM KL +++ G + VRK Sbjct: 922 LNVYIQWRTHKYSAKWCADNYLHVKALKKVREVRAQLKEIMQDLKLPLISNGSEWDIVRK 981 Query: 484 AITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQR--QPDWVIYHELVMTTKEYMR 311 I + +F +AAR Y + P ++HP+SALF PD+V+YHEL+MT KEYM+ Sbjct: 982 CICSAYFHNAARLKGIGEYVNVRTGIPCFLHPTSALFGMGFMPDYVVYHELIMTAKEYMQ 1041 Query: 310 EVTVVDPKWLVELAPRFYKGADPTKMSKRKRQE 212 VT VD WL EL P FY K SK+ R+E Sbjct: 1042 CVTAVDAIWLAELGPMFYS----IKESKQSRKE 1070
>DHX15_ARATH (O22899) Probable pre-mRNA-splicing factor ATP-dependent RNA helicase| (EC 3.6.1.-) Length = 729 Score = 120 bits (301), Expect = 4e-27 Identities = 61/163 (37%), Positives = 99/163 (60%), Gaps = 4/163 (2%) Frame = -2 Query: 664 LQVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMDRYKLDVVAAGKN----FT 497 L VY A+K N WCFENFV +R+++ A +VR+QL+ IM R+ L + + N + Sbjct: 559 LNVYHAYKQNNEDPNWCFENFVNNRAMKSADNVRQQLVRIMSRFNLKMCSTDFNSRDYYV 618 Query: 496 KVRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEY 317 +RKA+ AG+F A + Y T+ +NQ V++HPS+ L +P+WVIY+E V+TT+ + Sbjct: 619 NIRKAMLAGYFMQVAHLERTGHYLTVKDNQVVHLHPSNCL-DHKPEWVIYNEYVLTTRNF 677 Query: 316 MREVTVVDPKWLVELAPRFYKGADPTKMSKRKRQERIEPLYDR 188 +R VT + +WLV++A +Y D + + + +E LY + Sbjct: 678 IRTVTDIRGEWLVDVAQHYY---DLSNFPNCEAKRALEKLYKK 717
>DHX15_MOUSE (O35286) Putative pre-mRNA-splicing factor ATP-dependent RNA helicase| DHX15 (EC 3.6.1.-) (DEAH box protein 15) Length = 795 Score = 119 bits (299), Expect = 7e-27 Identities = 59/157 (37%), Positives = 96/157 (61%), Gaps = 4/157 (2%) Frame = -2 Query: 664 LQVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMDRYKLDV----VAAGKNFT 497 L VY A+K + S WC++NF+ RSL A +VR+QL IMDR+ L + + Sbjct: 628 LNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYI 687 Query: 496 KVRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEY 317 +RKA+ G+F A + Y T+ +NQ V +HPS+ L +P+WV+Y+E V+TTK Y Sbjct: 688 NIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVL-DHKPEWVLYNEFVLTTKNY 746 Query: 316 MREVTVVDPKWLVELAPRFYKGADPTKMSKRKRQERI 206 +R T + P+WLV++AP++Y ++ + +++ +RI Sbjct: 747 IRTCTDIKPEWLVKIAPQYYDMSNFPQCEAKRQLDRI 783
>DHX15_HUMAN (O43143) Putative pre-mRNA-splicing factor ATP-dependent RNA helicase| DHX15 (EC 3.6.1.-) (DEAH box protein 15) (ATP-dependent RNA helicase #46) Length = 795 Score = 119 bits (299), Expect = 7e-27 Identities = 59/157 (37%), Positives = 96/157 (61%), Gaps = 4/157 (2%) Frame = -2 Query: 664 LQVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMDRYKLDV----VAAGKNFT 497 L VY A+K + S WC++NF+ RSL A +VR+QL IMDR+ L + + Sbjct: 628 LNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYI 687 Query: 496 KVRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEY 317 +RKA+ G+F A + Y T+ +NQ V +HPS+ L +P+WV+Y+E V+TTK Y Sbjct: 688 NIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVL-DHKPEWVLYNEFVLTTKNY 746 Query: 316 MREVTVVDPKWLVELAPRFYKGADPTKMSKRKRQERI 206 +R T + P+WLV++AP++Y ++ + +++ +RI Sbjct: 747 IRTCTDIKPEWLVKIAPQYYDMSNFPQCEAKRQLDRI 783
>PRP16_YEAST (P15938) Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16| (EC 3.6.1.-) Length = 1071 Score = 119 bits (299), Expect = 7e-27 Identities = 66/164 (40%), Positives = 97/164 (59%), Gaps = 2/164 (1%) Frame = -2 Query: 664 LQVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMDRYKLDVVAAGKNFTKVRK 485 L V+E W+A NFS WC ++FVQ +SL RA+D+R QLLTI+ K+ V+++GK++ ++K Sbjct: 846 LNVFEQWRANNFSSHWCNKHFVQYKSLVRARDIRDQLLTILKSQKIPVISSGKDWDIIKK 905 Query: 484 AITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSAL--FQRQPDWVIYHELVMTTKEYMR 311 I +GF AA+ Y L V +HP+SAL P +V+YHEL+MT+KEY+ Sbjct: 906 CICSGFAHQAAKITGLRNYVHLKTGVSVQLHPTSALHGLGDLPPYVVYHELLMTSKEYIC 965 Query: 310 EVTVVDPKWLVELAPRFYKGADPTKMSKRKRQERIEPLYDRYHE 179 VT VDP WL+E Y K K ++ L+ ++E Sbjct: 966 CVTSVDPFWLMEYGGLLY----DIKRIKNDQEATTTGLFGEHYE 1005
>PRP43_YEAST (P53131) Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43| (EC 3.6.1.-) (Helicase JA1) Length = 767 Score = 116 bits (290), Expect = 7e-26 Identities = 67/180 (37%), Positives = 104/180 (57%), Gaps = 9/180 (5%) Frame = -2 Query: 664 LQVYEAWKAKNFSG----PWCFENFVQSRSLRRAQDVRKQLLTIMDRYKLDV----VAAG 509 L VY A+K+ WC ++++ RSL A ++R QL +M+RY L++ + Sbjct: 583 LNVYHAFKSDEAYEYGIHKWCRDHYLNYRSLSAADNIRSQLERLMNRYNLELNTTDYESP 642 Query: 508 KNFTKVRKAITAGFFFHAARK-DPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVM 332 K F +RKA+ +GFF A+K +GY T+ +NQ V IHPS+ L +WVIY+E V+ Sbjct: 643 KYFDNIRKALASGFFMQVAKKRSGAKGYITVKDNQDVLIHPSTVL-GHDAEWVIYNEFVL 701 Query: 331 TTKEYMREVTVVDPKWLVELAPRFYKGADPTKMSKRKRQERIEPLYDRYHEPNSWRLSKR 152 T+K Y+R VT V P+WL+E+AP +Y ++ K + ERI+ DR +E + K+ Sbjct: 702 TSKNYIRTVTSVRPEWLIEIAPAYYDLSNFQKGDVKLSLERIKEKVDRLNELKQGKNKKK 761
>DHX15_SCHPO (O42945) Probable pre-mRNA-splicing factor ATP-dependent RNA| helicase prp43 (EC 3.6.1.-) Length = 735 Score = 115 bits (287), Expect = 2e-25 Identities = 56/141 (39%), Positives = 91/141 (64%), Gaps = 5/141 (3%) Frame = -2 Query: 664 LQVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMDRYKLDVVAA---GKNF-T 497 L VY A+K+ + WC+ +F+ R+L A +VRKQL M+R ++++++ KN+ Sbjct: 565 LNVYHAYKSGEGTADWCWNHFLSHRALISADNVRKQLRRTMERQEVELISTPFDDKNYYV 624 Query: 496 KVRKAITAGFFFHAARKDPQ-EGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKE 320 +R+A+ +GFF A+K + Y T+ +NQ V +HPS L P+WV+Y+E V+TTK Sbjct: 625 NIRRALVSGFFMQVAKKSANGKNYVTMKDNQVVSLHPSCGL-SVTPEWVVYNEFVLTTKS 683 Query: 319 YMREVTVVDPKWLVELAPRFY 257 ++R VT + P+WL+ELAP +Y Sbjct: 684 FIRNVTAIRPEWLIELAPNYY 704
>DHX15_CAEEL (Q20875) Putative pre-mRNA-splicing factor ATP-dependent RNA| helicase F56D2.6 (EC 3.6.1.-) Length = 739 Score = 114 bits (285), Expect = 3e-25 Identities = 54/140 (38%), Positives = 86/140 (61%), Gaps = 4/140 (2%) Frame = -2 Query: 664 LQVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMDRYKLDVVAAGKN----FT 497 L VY ++K WC++NF+ R+++ A VR QL +MD+Y L V+ + Sbjct: 572 LNVYHSFKQNQEDPQWCYDNFINYRTMKTADTVRTQLSRVMDKYNLRRVSTDFKSRDYYL 631 Query: 496 KVRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEY 317 +RKA+ AGFF A + Y T+ +NQ V +HPS+ L +P+W +Y+E V+TTK + Sbjct: 632 NIRKALVAGFFMQVAHLERSGHYVTVKDNQLVNLHPSTVL-DHKPEWALYNEFVLTTKNF 690 Query: 316 MREVTVVDPKWLVELAPRFY 257 +R VT V P+WL+++AP++Y Sbjct: 691 IRTVTDVRPEWLLQIAPQYY 710
>DHX35_PONPY (Q5RBD4) Probable ATP-dependent RNA helicase DHX35 (EC 3.6.1.-)| (DEAH box protein 35) Length = 720 Score = 111 bits (278), Expect = 2e-24 Identities = 54/138 (39%), Positives = 90/138 (65%), Gaps = 1/138 (0%) Frame = -2 Query: 664 LQVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMDRYKLDVVAAGKNFTKVRK 485 L VYEA+ N + WC E+F+ + L RA VR+QL ++ ++++ ++ + V + Sbjct: 549 LNVYEAFIKHNKNSQWCQEHFLNYKGLVRAATVREQLKKLLVKFQVPKKSSEGDPDPVLR 608 Query: 484 AITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALF-QRQPDWVIYHELVMTTKEYMRE 308 I +GFF +AAR YRT+ ++ ++IHP+S L+ ++ P WVIY+E++ T+K YMR+ Sbjct: 609 CIVSGFFANAARFHSTGAYRTIRDDHELHIHPASVLYAEKPPRWVIYNEVIQTSKYYMRD 668 Query: 307 VTVVDPKWLVELAPRFYK 254 VT ++ WL+ELAP FY+ Sbjct: 669 VTAIESAWLLELAPHFYQ 686
>DHX35_HUMAN (Q9H5Z1) Probable ATP-dependent RNA helicase DHX35 (EC 3.6.1.-) (DEAH| box protein 35) Length = 703 Score = 111 bits (277), Expect = 2e-24 Identities = 55/155 (35%), Positives = 98/155 (63%), Gaps = 1/155 (0%) Frame = -2 Query: 664 LQVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMDRYKLDVVAAGKNFTKVRK 485 L +YEA+ N WC E+F+ + L RA VR+QL ++ ++++ ++ + V + Sbjct: 549 LNIYEAFIKHNKDSKWCQEHFLNYKGLVRAATVREQLKKLLVKFQVPRKSSEGDPDLVLR 608 Query: 484 AITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALF-QRQPDWVIYHELVMTTKEYMRE 308 I +GFF +AAR YRT+ ++ ++IHP+S L+ ++ P WVIY+E++ T+K YMR+ Sbjct: 609 CIVSGFFANAARFHSTGAYRTIRDDHELHIHPASVLYAEKPPRWVIYNEVIQTSKYYMRD 668 Query: 307 VTVVDPKWLVELAPRFYKGADPTKMSKRKRQERIE 203 VT ++ WL+ELAP FY+ T +S + ++ +++ Sbjct: 669 VTAIESAWLLELAPHFYQ--QGTHLSLKAKRAKVQ 701
>PRP16_SCHPO (Q9P774) Pre-mRNA-splicing factor ATP-dependent RNA helicase prp16| (EC 3.6.1.-) Length = 1173 Score = 105 bits (261), Expect = 2e-22 Identities = 52/138 (37%), Positives = 85/138 (61%), Gaps = 2/138 (1%) Frame = -2 Query: 664 LQVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMDRYKLDVVAAGKNFTKVRK 485 L +Y+ W+ +S WC ++F+ S++L+RA+D+R+QL+ IM + K+ + + ++ VR+ Sbjct: 972 LNIYQHWQRNGYSNSWCSKHFLHSKTLKRARDIRQQLVEIMSKQKISLESVS-DWDIVRR 1030 Query: 484 AITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQ--PDWVIYHELVMTTKEYMR 311 + + +F AA Y L P ++H +S+L+ PD+VIYHELV+T+KEYM Sbjct: 1031 VLCSAYFHQAACAKGIGEYVHLRSGMPCHLHVTSSLYGLGYLPDYVIYHELVLTSKEYMN 1090 Query: 310 EVTVVDPKWLVELAPRFY 257 VT VDP WL E +Y Sbjct: 1091 IVTSVDPYWLAEFGGVYY 1108
>DHX33_HUMAN (Q9H6R0) Putative ATP-dependent RNA helicase DHX33 (EC 3.6.1.-)| (DEAH box protein 33) Length = 707 Score = 99.8 bits (247), Expect = 7e-21 Identities = 49/137 (35%), Positives = 75/137 (54%) Frame = -2 Query: 664 LQVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMDRYKLDVVAAGKNFTKVRK 485 L +Y +K + WC ENFV S+++ +VR QL I + + + ++ + VR+ Sbjct: 563 LNIYRTFKNLGGNKDWCKENFVNSKNMTLVAEVRAQLRDICLKMSMPIASSRGDVESVRR 622 Query: 484 AITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREV 305 + F A P Y T +QPV IHPSS LF +P V+Y EL+ T K YMR++ Sbjct: 623 CLAHSLFMSTAELQPDGTYATTDTHQPVAIHPSSVLFHCKPACVVYTELLYTNKCYMRDL 682 Query: 304 TVVDPKWLVELAPRFYK 254 V+D +WL E AP +++ Sbjct: 683 CVIDAQWLYEAAPEYFR 699
>DHX33_MOUSE (Q80VY9) Putative ATP-dependent RNA helicase DHX33 (EC 3.6.1.-)| (DEAH box protein 33) Length = 698 Score = 94.7 bits (234), Expect = 2e-19 Identities = 48/137 (35%), Positives = 75/137 (54%) Frame = -2 Query: 664 LQVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMDRYKLDVVAAGKNFTKVRK 485 L +Y +K + WC ENFV S+++ +VR QL I + + ++++ + VR+ Sbjct: 554 LNIYRTFKNIGGNKDWCKENFVNSKNMLLVAEVRAQLREICLKMSMPIMSSRGDMESVRR 613 Query: 484 AITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREV 305 + F + A Y T +QPV IHPSS LF +P V+Y L+ T K YMR++ Sbjct: 614 CMAHSLFMNTAELQTDGTYATTDTHQPVAIHPSSVLFHCKPACVVYTSLLYTNKCYMRDL 673 Query: 304 TVVDPKWLVELAPRFYK 254 VVD +WL E AP +++ Sbjct: 674 CVVDAEWLYEAAPDYFR 690
>PRH1_SCHPO (Q03319) Probable ATP-dependent RNA helicase prh1 (EC 3.6.1.-)| Length = 719 Score = 87.8 bits (216), Expect = 3e-17 Identities = 44/122 (36%), Positives = 73/122 (59%), Gaps = 2/122 (1%) Frame = -2 Query: 619 WCFENFVQSRSLRRAQDVRKQLLT--IMDRYKLDVVAAGKNFTKVRKAITAGFFFHAARK 446 WC +NF+ R+L+ D+RKQL + D ++L+ + N + + +G+ + A Sbjct: 593 WCSQNFINRRALKTILDIRKQLREHCLKDGWELNS-SPEVNSENLLLSFLSGYITNTALL 651 Query: 445 DPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVVDPKWLVELAP 266 P YRT++ NQ + IHPSS+LF ++ + ++YHELV TTK Y+R V+ + WL +AP Sbjct: 652 HPDGSYRTIIGNQTISIHPSSSLFGKKVEAIMYHELVFTTKSYVRGVSSIRSNWLNAVAP 711 Query: 265 RF 260 + Sbjct: 712 HY 713
>DHX35_CAEEL (Q9BKQ8) Probable ATP-dependent RNA helicase DHX35 homolog (EC| 3.6.1.-) Length = 732 Score = 85.5 bits (210), Expect = 1e-16 Identities = 49/155 (31%), Positives = 88/155 (56%), Gaps = 6/155 (3%) Frame = -2 Query: 664 LQVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMDRYKLDVVAAGKNFT---K 494 L V+ + S WC ++FV R L RA +VR QL+ ++ R++++ V++ Sbjct: 568 LNVFTKFVENGRSKKWCSDHFVNYRGLMRADNVRSQLVRLLKRFEIEKVSSRGLINCSEN 627 Query: 493 VRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQ--PDWVIYHELVMTTKE 320 +R+ + GFF AA+ Y T+ E+ P ++ S++ ++ P WVI+ E++ ++ Sbjct: 628 IRQCLVTGFFSQAAQYHYTGKYMTVKESFPFNMYKGSSIMFKKDYPKWVIFTEVM---QD 684 Query: 319 YMREVTVVDPKWLVELAPRFYK-GADPTKMSKRKR 218 +R+VTV++P+WL ELAP +Y+ G + KR R Sbjct: 685 SIRDVTVIEPEWLYELAPHYYEFGTEGELAEKRMR 719
>PRP2_YEAST (P20095) Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP2 (EC| 3.6.1.-) Length = 876 Score = 72.4 bits (176), Expect = 1e-12 Identities = 43/171 (25%), Positives = 89/171 (52%), Gaps = 22/171 (12%) Frame = -2 Query: 664 LQVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMD-----------RYKLDVV 518 L+++ W+ FS WC ++ +Q +++ R +++R QL + R K+ + Sbjct: 708 LEIFNQWRNSKFSRSWCQDHKIQFKTMLRVRNIRNQLFRCSEKVGLVEKNDQARMKIGNI 767 Query: 517 AAGKNFTKVRKAITAGFFFHAARKDPQEGYRTLVENQ---PVYIHPSSALF-------QR 368 A N ++ + +GF + + P GY+T+ + V +HP+S LF QR Sbjct: 768 AGYIN-ARITRCFISGFPMNIVQLGP-TGYQTMGRSSGGLNVSVHPTSILFVNHKEKAQR 825 Query: 367 QPDWVIYHELVMTTKEYMREVTVV-DPKWLVELAPRFYKGADPTKMSKRKR 218 +V+Y +L++T+KE++R+ V+ +WL+++ P+ +K K ++ +R Sbjct: 826 PSKYVLYQQLMLTSKEFIRDCLVIPKEEWLIDMVPQIFKDLIDDKTNRGRR 876
>DHX37_HUMAN (Q8IY37) Probable ATP-dependent RNA helicase DHX37 (EC 3.6.1.-) (DEAH| box protein 37) Length = 1157 Score = 69.3 bits (168), Expect = 1e-11 Identities = 35/89 (39%), Positives = 54/89 (60%), Gaps = 9/89 (10%) Frame = -2 Query: 499 TKVRKAITAGFFFHAARKDPQE---------GYRTLVENQPVYIHPSSALFQRQPDWVIY 347 T +R+ +TAG H AR+ E Y+T + + PV+IHPSS LF+ P++V+Y Sbjct: 923 TYLRQIVTAGLGDHLARRVQSEEMLEDKWRNAYKTPLLDDPVFIHPSSVLFKELPEFVVY 982 Query: 346 HELVMTTKEYMREVTVVDPKWLVELAPRF 260 E+V TTK YM+ V+ V+ +W+ L P + Sbjct: 983 QEIVETTKMYMKGVSSVEVQWIPALLPSY 1011
>HRPA_HAEIN (P45018) ATP-dependent RNA helicase hrpA homolog (EC 3.6.1.-)| Length = 1304 Score = 65.5 bits (158), Expect = 1e-10 Identities = 37/137 (27%), Positives = 66/137 (48%) Frame = -2 Query: 664 LQVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMDRYKLDVVAAGKNFTKVRK 485 LQ + +KN C ++F+ +R QD+ Q+ + L + + + ++ Sbjct: 571 LQEQQKESSKNQFRRQCQKDFLNYLRIREWQDIYHQIRLTVREMSLPINSEKAEYQQIHT 630 Query: 484 AITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREV 305 A+ +G H K+ ++ N I P+S LF++QP WV+ ELV T+K + R V Sbjct: 631 ALLSGLLSHIGLKEAEKQQYLGARNAHFAIFPNSVLFKKQPKWVMAAELVETSKLWGRMV 690 Query: 304 TVVDPKWLVELAPRFYK 254 ++P+W+ LA K Sbjct: 691 AEIEPEWIEPLAEHLIK 707
>DHR2_YEAST (P36009) Probable ATP-dependent RNA helicase DHR2 (EC 3.6.1.-) (DEAH| box RNA helicase DHR2) (Helicase JA2) Length = 735 Score = 61.2 bits (147), Expect = 3e-09 Identities = 42/142 (29%), Positives = 64/142 (45%), Gaps = 14/142 (9%) Frame = -2 Query: 655 YEAWKAKNFSGP---WCFENFVQSRSLRRAQDVRKQL----------LTIMDRYKLDVVA 515 YE K+++ S WC + R + VR QL ++ D + Sbjct: 578 YELGKSQDASSERNDWCKGLCISIRGFKNVIRVRDQLRVYCKRLFSSISEEDEESKKIGE 637 Query: 514 AGKNFTKVRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQP-DWVIYHEL 338 G+ +K+ K GF + A P YRT+ +P+ IHPSS LF + ++Y E Sbjct: 638 DGELISKILKCFLTGFIKNTAIGMPDRSYRTVSTGEPISIHPSSMLFMNKSCPGIMYTEY 697 Query: 337 VMTTKEYMREVTVVDPKWLVEL 272 V TTK Y R V+ ++ WL E+ Sbjct: 698 VFTTKGYARNVSRIELSWLQEV 719
>HRPA_ECOLI (P43329) ATP-dependent RNA helicase hrpA (EC 3.6.1.-)| Length = 1300 Score = 58.9 bits (141), Expect = 1e-08 Identities = 32/121 (26%), Positives = 56/121 (46%) Frame = -2 Query: 616 CFENFVQSRSLRRAQDVRKQLLTIMDRYKLDVVAAGKNFTKVRKAITAGFFFHAARKDPQ 437 C +++ +R QD+ QL ++ + V + + ++ A+ G H KD Sbjct: 581 CRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDAD 640 Query: 436 EGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVVDPKWLVELAPRFY 257 + T N I P S LF++ P WV+ ELV T++ + R +DP+W+ +A Sbjct: 641 KQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLI 700 Query: 256 K 254 K Sbjct: 701 K 701
>YK99_SCHPO (Q9HE06) Putative pre-mRNA-splicing factor ATP-dependent RNA| helicase C20H4.09 (EC 3.6.1.-) (DEAH-box helicase C20H4.09) Length = 647 Score = 58.5 bits (140), Expect = 2e-08 Identities = 32/142 (22%), Positives = 74/142 (52%), Gaps = 3/142 (2%) Frame = -2 Query: 670 STLQVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMDRYKLDVV--AAGKNFT 497 + L V+E++ WC +N++ ++LR+A D+R L+ ++++ + + + Sbjct: 508 TALNVFESFVGNKKDLQWCRKNYLNYQTLRQALDIRTHLVRFLNKFSIPTAQRLPSSDCS 567 Query: 496 KVRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMT-TKE 320 K+ K + GF + A Y+T+ Q V++ SS L +++ W++Y V + T+ Sbjct: 568 KILKCLLDGFVRNVAHLQNDGSYKTIGGKQ-VWLDSSSVLHEKKTPWIMYSSAVESETQI 626 Query: 319 YMREVTVVDPKWLVELAPRFYK 254 +++ ++ ++ WL ++YK Sbjct: 627 FVKNISKIESFWL----DKYYK 644
>DHX15_STRPU (O17438) Putative pre-mRNA-splicing factor ATP-dependent RNA| helicase PRP1 (EC 3.6.1.-) (Fragment) Length = 455 Score = 54.3 bits (129), Expect = 3e-07 Identities = 25/54 (46%), Positives = 33/54 (61%) Frame = -2 Query: 664 LQVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMDRYKLDVVAAGKN 503 L VY A+K N WC++NF+Q RSL+ A VR+QL IMDR+ L + N Sbjct: 396 LNVYHAFKQNNEDPQWCYDNFIQYRSLKSADSVRQQLARIMDRFALQRTSTNFN 449
>KZ_DROME (O46072) Probable ATP-dependent RNA helicase kurz (EC 3.6.1.-)| Length = 1192 Score = 52.0 bits (123), Expect = 2e-06 Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 5/96 (5%) Frame = -2 Query: 538 RYKLDVVAAGKNFTKVRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPD 359 R+ ++ AG RK A R+ + Y +P ++H SS L Q+ P+ Sbjct: 944 RFLRQILLAGMGDRVARKVPLADIADKEERRRLKYAYNCADMEEPAFLHVSSVLRQKAPE 1003 Query: 358 WVIYHELVM-----TTKEYMREVTVVDPKWLVELAP 266 WVIY E +TK ++R +T ++P+WL+ P Sbjct: 1004 WVIYQEAYELQNGDSTKMFIRGITAIEPEWLLLYVP 1039
>YKQ0_CAEEL (P34305) Putative ATP-dependent RNA helicase C06E1.10 in chromosome| III (EC 3.6.1.-) Length = 1148 Score = 48.5 bits (114), Expect = 2e-05 Identities = 35/111 (31%), Positives = 53/111 (47%), Gaps = 10/111 (9%) Frame = -2 Query: 493 VRKAITAGFFFHAARK--------DPQEG-YRTLVENQPVYIHPSSALFQRQPDWVIYHE 341 +R+ + A F AR+ + Q+G Y T + V+I P S +F +P++VIY E Sbjct: 903 LRQMVVASFSDRLARRVDRSVGQEEVQKGAYETTLIKGHVFIDPCSVVFTEEPEFVIYQE 962 Query: 340 LV-MTTKEYMREVTVVDPKWLVELAPRFYKGADPTKMSKRKRQERIEPLYD 191 LV + K+ M V VD +WL LA + + K EP+YD Sbjct: 963 LVQVNEKKLMTSVCAVDKEWLSRLAESYCNYGEQDKNQ--------EPIYD 1005
>CRR1_ASHGO (Q75A41) Probable glycosidase CRR1 precursor (EC 3.2.-.-)| (CRH-related protein 1) Length = 450 Score = 41.6 bits (96), Expect = 0.002 Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 4/62 (6%) Frame = -1 Query: 488 ESNHCRLLFPCCQE----GSPGRIQNLGGEPASVHSPKQCAVPAPTRLGHLP*ACNDDQG 321 E++HC +PCC + GS G + G P HSP+ C VP P L L +DD+G Sbjct: 33 EASHCPKEWPCCSQYGQCGS-GPLCISGCNPKFSHSPESC-VPVPALLPQLEIVASDDKG 90 Query: 320 VY 315 VY Sbjct: 91 VY 92
>YK16_SCHPO (Q9HDY4) Putative ATP-dependent RNA helicase PB1A10.06c (EC 3.6.1.-)| Length = 1183 Score = 36.2 bits (82), Expect = 0.096 Identities = 32/134 (23%), Positives = 60/134 (44%), Gaps = 17/134 (12%) Frame = -2 Query: 619 WCFENFVQSRSLRRAQDVRKQLLTIMDRYKLDVVAAGKNFTK-------------VRKAI 479 +C EN+++ ++L ++RKQ++ ++ RY +V K F K +R+ I Sbjct: 989 FCKENYLREKALEEVTNLRKQIIGLLKRY---MVRVEKEFFKLQLKPPTSVQIKALRQFI 1045 Query: 478 TAGFFFHAARKDPQE-GYRTLV-ENQPVYIHPSSALFQRQPDWVIYHEL--VMTTKEYMR 311 + + A D ++ GY TL V + ++V+Y L + + YM Sbjct: 1046 ASAYIDQVALYDKEKRGYVTLFPSGSEVVQFVPDRTYNIDSEYVVYLSLHESRSGRVYMS 1105 Query: 310 EVTVVDPKWLVELA 269 +T + P+ L LA Sbjct: 1106 PLTEISPEHLARLA 1119
>TRPA1_HUMAN (O75762) Transient receptor potential cation channel subfamily A| member 1 (Ankyrin-like with transmembrane domains protein 1) (Transformation sensitive-protein p120) Length = 1119 Score = 32.7 bits (73), Expect = 1.1 Identities = 14/39 (35%), Positives = 23/39 (58%) Frame = -1 Query: 509 EELHESQESNHCRLLFPCCQEGSPGRIQNLGGEPASVHS 393 +EL ++++ C L C++G PG + NL G S+HS Sbjct: 403 KELVMDEDNDGCTPLHYACRQGGPGSVNNLLGFNVSIHS 441
>SEM1A_DROME (Q24322) Semaphorin-1A precursor (Semaphorin-I) (Sema I)| Length = 850 Score = 31.2 bits (69), Expect = 3.1 Identities = 32/124 (25%), Positives = 44/124 (35%), Gaps = 7/124 (5%) Frame = -2 Query: 520 VAAGKNFTKVRKAITAGFFFHAARKD-------PQEGYRTLVENQPVYIHPSSALFQRQP 362 V AG F+ + T F KD P Y + Q V PSS Q++P Sbjct: 612 VLAGSIFSLLVGFFTGYFCGRRCHKDEDDNLPYPDTEYEYFEQRQNVNSFPSSCRIQQEP 671 Query: 361 DWVIYHELVMTTKEYMREVTVVDPKWLVELAPRFYKGADPTKMSKRKRQERIEPLYDRYH 182 + + EVT +P L + P P KM K R P++ + Sbjct: 672 KLL----------PQVEEVTYAEPVLLPQPPP-------PNKMHSPKNTLRKPPMHQMHQ 714 Query: 181 EPNS 170 PNS Sbjct: 715 GPNS 718
>TAH18_GIBZE (Q4HZQ1) Probable NADPH reductase TAH18 (EC 1.-.-.-)| Length = 593 Score = 30.8 bits (68), Expect = 4.1 Identities = 14/45 (31%), Positives = 25/45 (55%) Frame = -2 Query: 142 WSIIPSHKFLRYCTYLCSAPRHYCSRYFDFTYRDYLYEYLNFSAQ 8 ++ IP FL+ +Y + P H R +FT +YL EY +++ + Sbjct: 303 FTAIPRRSFLKNMSYFSTNPDHK-ERLLEFTMAEYLDEYFDYATR 346
>ROK1_EMENI (Q5BET6) ATP-dependent RNA helicase rok1 (EC 3.6.1.-)| Length = 742 Score = 30.8 bits (68), Expect = 4.1 Identities = 15/36 (41%), Positives = 21/36 (58%) Frame = -2 Query: 310 EVTVVDPKWLVELAPRFYKGADPTKMSKRKRQERIE 203 ++ V D + L ELAP + +P K KRK+QE E Sbjct: 126 KIKVTDMRDLEELAPAQVQSEEPKKKKKRKQQEEAE 161
>PMT2_YEAST (P31382) Dolichyl-phosphate-mannose--protein mannosyltransferase 2| (EC 2.4.1.109) Length = 759 Score = 30.4 bits (67), Expect = 5.3 Identities = 14/50 (28%), Positives = 22/50 (44%) Frame = +3 Query: 351 MTQSGWRWNSALLG*MYTGWFSTKVLYPSWGSFLAAWKKKPAVIAFLTFV 500 + S W+W + +G GW Y G+ + W AV+AF+ V Sbjct: 576 LASSAWQWPTLNVGLRLCGWGDDNPKYFLLGTPASTWASSVAVLAFMATV 625
>Y7973_BRAJA (Q89C25) UPF0313 protein blr7973| Length = 673 Score = 30.4 bits (67), Expect = 5.3 Identities = 11/29 (37%), Positives = 18/29 (62%) Frame = -2 Query: 253 GADPTKMSKRKRQERIEPLYDRYHEPNSW 167 G+D + K RQ R+ + RYH+P++W Sbjct: 585 GSDKVEAIKGLRQRRLHKAFLRYHDPDNW 613
>Y679_RHOPA (P61405) UPF0313 protein RPA0679| Length = 677 Score = 29.6 bits (65), Expect = 9.0 Identities = 10/28 (35%), Positives = 18/28 (64%) Frame = -2 Query: 250 ADPTKMSKRKRQERIEPLYDRYHEPNSW 167 ++P + K RQ R+ + RYH+P++W Sbjct: 589 SEPVEAIKGLRQRRLHKAFLRYHDPDNW 616
>ROR1_MOUSE (Q9Z139) Tyrosine-protein kinase transmembrane receptor ROR1| precursor (EC 2.7.10.1) (Neurotrophic tyrosine kinase, receptor-related 1) (mROR1) Length = 937 Score = 29.6 bits (65), Expect = 9.0 Identities = 13/34 (38%), Positives = 21/34 (61%) Frame = -3 Query: 231 ARGSDRKESSLCTTGTMSPTHGVSASAELDGPSY 130 ARG+D +E+ L + + PT + S+E+D SY Sbjct: 24 ARGADAQETELSVSAELVPTSSWNTSSEIDKGSY 57
>Y1980_VIBPA (Q87N95) UPF0313 protein VP1980| Length = 777 Score = 29.6 bits (65), Expect = 9.0 Identities = 12/33 (36%), Positives = 19/33 (57%) Frame = -2 Query: 259 YKGADPTKMSKRKRQERIEPLYDRYHEPNSWRL 161 YK + ++K +RQ R+ RYH+P +W L Sbjct: 614 YKQREDIPVAKGERQRRLHKALLRYHDPANWPL 646 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 107,998,287 Number of Sequences: 219361 Number of extensions: 2489139 Number of successful extensions: 7207 Number of sequences better than 10.0: 45 Number of HSP's better than 10.0 without gapping: 6918 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7177 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6825954960 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
