| Clone Name | rbaal1k16 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC154032.1| Drosophila melanogaster clone BACR16N23, complete sequence Length = 149839 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 58 ttttttgtatttatacagaactg 80 ||||||||||||||||||||||| Sbjct: 64931 ttttttgtatttatacagaactg 64909
>gb|AC010916.9| Drosophila melanogaster clone BACR11A04, complete sequence Length = 165458 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 58 ttttttgtatttatacagaactg 80 ||||||||||||||||||||||| Sbjct: 63801 ttttttgtatttatacagaactg 63823
>gb|AE003847.5| Drosophila melanogaster chromosome 4, section 4 of 5 of the complete sequence Length = 107108 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 58 ttttttgtatttatacagaactg 80 ||||||||||||||||||||||| Sbjct: 81785 ttttttgtatttatacagaactg 81763
>gb|AC148822.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0036K13 map near R3342S, complete sequence Length = 135684 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 374 catctatttagaaacagagatagtac 399 |||||||||| ||||||||||||||| Sbjct: 37245 catctatttaaaaacagagatagtac 37270
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 374 catctatttagaaacagagatagtac 399 |||||||||| ||||||||||||||| Sbjct: 27501118 catctatttaaaaacagagatagtac 27501143
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 374 catctatttagaaacagagatagtac 399 |||||||||| ||||||||||||||| Sbjct: 3172300 catctatttaaaaacagagatagtac 3172275
>dbj|AP005454.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0455F03 Length = 158201 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 374 catctatttagaaacagagatagtac 399 |||||||||| ||||||||||||||| Sbjct: 87290 catctatttaaaaacagagatagtac 87265
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 374 catctatttagaaacagagatagtac 399 |||||||||| ||||||||||||||| Sbjct: 27525106 catctatttaaaaacagagatagtac 27525131
>gb|AC010297.5| Homo sapiens chromosome 5 clone CTB-162J7, complete sequence Length = 157580 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 58 ttttttgtatttatacagaac 78 ||||||||||||||||||||| Sbjct: 131284 ttttttgtatttatacagaac 131304
>emb|CR376843.11| Zebrafish DNA sequence from clone CH211-284N15 in linkage group 19, complete sequence Length = 75162 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 51 tctgacattttttgtatttat 71 ||||||||||||||||||||| Sbjct: 17111 tctgacattttttgtatttat 17131
>emb|AL365367.10| Human DNA sequence from clone RP4-736C13 on chromosome 1p32.2-32.3 Contains part of a variant of the DAB1 gene for disabled homolog 1 (Drosophila), complete sequence Length = 90675 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 atgcaatttttcttcacaga 360 |||||||||||||||||||| Sbjct: 48630 atgcaatttttcttcacaga 48649
>emb|BX511223.6| Zebrafish DNA sequence from clone DKEYP-96B6 in linkage group 14, complete sequence Length = 190254 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 57 attttttgtatttatacagaactg 80 |||||||||||||||| ||||||| Sbjct: 16757 attttttgtatttatatagaactg 16734
>gb|AC147892.2| Xenopus tropicalis clone CH216-35D21, complete sequence Length = 178580 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 cattttttgtatttatacag 75 |||||||||||||||||||| Sbjct: 109065 cattttttgtatttatacag 109046
>gb|AC136214.4| Mus musculus BAC clone RP23-53G11 from chromosome 10, complete sequence Length = 203909 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 aagtgaacagcactcctcca 194 |||||||||||||||||||| Sbjct: 101401 aagtgaacagcactcctcca 101420
>emb|BX005235.8| Zebrafish DNA sequence from clone DKEY-68L7 in linkage group 23, complete sequence Length = 141636 Score = 40.1 bits (20), Expect = 6.3 Identities = 22/23 (95%) Strand = Plus / Minus Query: 100 taaataaattncctaatgaagtt 122 |||||||||| |||||||||||| Sbjct: 99513 taaataaattacctaatgaagtt 99491
>dbj|AK112759.1| Ciona intestinalis cDNA, clone:cieg054k11, full insert sequence Length = 4402 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 tttgtttgaaccttcaagtt 251 |||||||||||||||||||| Sbjct: 2773 tttgtttgaaccttcaagtt 2754
>dbj|AP006127.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT48O21, TM0211, complete sequence Length = 137303 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 tttttcttcacagactacaa 366 |||||||||||||||||||| Sbjct: 42463 tttttcttcacagactacaa 42444
>emb|AL929508.6| Zebrafish DNA sequence from clone CH211-158G13, complete sequence Length = 180029 Score = 40.1 bits (20), Expect = 6.3 Identities = 22/23 (95%) Strand = Plus / Plus Query: 100 taaataaattncctaatgaagtt 122 |||||||||| |||||||||||| Sbjct: 119398 taaataaattacctaatgaagtt 119420 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,674,170 Number of Sequences: 3902068 Number of extensions: 4674170 Number of successful extensions: 78603 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 18 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 78505 Number of HSP's gapped (non-prelim): 98 length of query: 468 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 446 effective length of database: 17,147,199,772 effective search space: 7647651098312 effective search space used: 7647651098312 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)