| Clone Name | rbags29o10 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK122040.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033113E02, full insert sequence Length = 3137 Score = 385 bits (194), Expect = e-103 Identities = 557/678 (82%), Gaps = 3/678 (0%) Strand = Plus / Minus Query: 87 agaagcagggtcctgtggtgcatcatctgtctccattgtagtagcatcctttggcacctc 146 |||||||||||| | ||||||||||||| |||||| ||||| |||||||| | ||| Sbjct: 1761 agaagcagggtcacctagtgcatcatctgtatccattttagtatcatcctttagtgtctc 1702 Query: 147 actcatagatgaaaccggaacttccacttcctcctcttccagcatcgttgctgattcaag 206 | | ||| || |||||||| |||||||||||||| ||||||| |||||||||||| Sbjct: 1701 atttgtagttgctaccggaacatccacttcctcctc---cagcatcattgctgattcaat 1645 Query: 207 agagactatcccatggatgttgaggcgaactttcactttcagtttagccttctcaccttt 266 |||||||||||||||||||||||| | ||||||| |||| ||| ||||||||| ||| Sbjct: 1644 agagactatcccatggatgttgagacatgctttcacattcacttttgccttctcaggttt 1585 Query: 267 gctagattggaaagggccgatcgtgtaagtgctaattttgtgtgttatttgcaaatcatc 326 ||| |||||||||||||| || || || | ||| ||||| | | |||||||||||||| Sbjct: 1584 gctggattggaaagggccaattgtataggagctgatttttttagccatttgcaaatcatc 1525 Query: 327 tgtgtcaacattcaaaacatccactgcaaatgtactggacctatagaaggtcagagcctt 386 || || ||| ||| ||| || |||||||||||| |||||||||||||||||| || || Sbjct: 1524 tgcatcgacactcacaacgtctactgcaaatgtattggacctatagaaggtcacagtttt 1465 Query: 387 gatgctaggcattggattccccttggggaatacaacagtttgttgggattcattgtcctg 446 | ||||| | |||| | || || ||||| || | ||| |||| ||||||| ||| || Sbjct: 1464 ggcactagggactggacttccttttgggaacacgatagtctgttcggattcagtgttctc 1405 Query: 447 agcatctggcttccatgataaagcaactgaaaaaggaaaaccttcattaacctgaaactc 506 || ||| || || ||||| ||||||| |||||| || || || ||||| |||| ||| || Sbjct: 1404 agaatccggtttgcatgacaaagcaattgaaaacgggaacccatcattgacctcaaattc 1345 Query: 507 ccgcactttaaatgtcgggctaagaatagcacactggagagcacatcccctggcaacaca 566 ||| ||||| || || |||||||||| ||||||||| ||||| ||||||| ||||||||| Sbjct: 1344 ccggactttgaaagtggggctaagaacagcacactgaagagcgcatccccgggcaacaca 1285 Query: 567 ttcacttgcattcatagttctccttggttcttttccaaagaattcagtaattatcttcat 626 |||||||||||||||||| ||||| ||||| |||||||| |||||||| |||||| | || Sbjct: 1284 ttcacttgcattcatagtcctcctcggttcctttccaaaaaattcagtgattatcctgat 1225 Query: 627 tactgcagggacacgagagcctgatccaacaacctcaacaaagtgcagactttctggcgt 686 || |||||| ||||||||||| ||||||||||||||||||||||||| | |||||| || Sbjct: 1224 tattgcaggaacacgagagcccgatccaacaacctcaacaaagtgcacattttctgttgt 1165 Query: 687 caagccagcttctgacaatgccttttncagcggccccttcacacgttctagtactggngc 746 ||||||||||| | ||| ||||||| || || |||||||||||| ||| ||||| | Sbjct: 1164 taagccagcttcagccaaggccttttccaatggagccttcacacgttgtagcactgggga 1105 Query: 747 actgatctgttcaaactc 764 |||||||||||| ||||| Sbjct: 1104 actgatctgttcgaactc 1087
>ref|NM_189556.2| Oryza sativa (japonica cultivar-group), mRNA Length = 3139 Score = 341 bits (172), Expect = 2e-90 Identities = 494/602 (82%) Strand = Plus / Minus Query: 163 ggaacttccacttcctcctcttccagcatcgttgctgattcaagagagactatcccatgg 222 |||||||||||||||||||| |||| ||| ||||||||||||| | ||| | ||||||| Sbjct: 1719 ggaacttccacttcctcctcctccaacattgttgctgattcaactgtgaccaccccatgg 1660 Query: 223 atgttgaggcgaactttcactttcagtttagccttctcacctttgctagattggaaaggg 282 ||||| ||||| ||||||||||||||||| || || |||||||||| | | |||||| Sbjct: 1659 atgttaaggcggactttcactttcagtttcgctttgtcacctttgccgggattgaaagga 1600 Query: 283 ccgatcgtgtaagtgctaattttgtgtgttatttgcaaatcatctgtgtcaacattcaaa 342 || | |||||||||||| || || ||| ||||||||||||| | || ||||||| | Sbjct: 1599 ccaaccgtgtaagtgctgatctttggtgatatttgcaaatcaccagtatcaacatacgtg 1540 Query: 343 acatccactgcaaatgtactggacctatagaaggtcagagccttgatgctaggcattgga 402 ||||| ||| ||||||| |||||||||||||||||| || || | ||| |||| ||| Sbjct: 1539 acatctacttgaaatgtattggacctatagaaggtcaatgctttaacgctgggcaatggg 1480 Query: 403 ttccccttggggaatacaacagtttgttgggattcattgtcctgagcatctggcttccat 462 || |||||||||||||||||||| |||||| ||| | ||||| ||||| |||||| Sbjct: 1479 ttacccttggggaatacaacagtctgttggttatcaccattctgagagtctggtttccat 1420 Query: 463 gataaagcaactgaaaaaggaaaaccttcattaacctgaaactcccgcactttaaatgtc 522 || | |||| ||| ||||| ||||| ||||||||||||||||| ||||||||||| || Sbjct: 1419 gacattgcaattgagaaagggaaaccatcattaacctgaaactctcgcactttaaaagtg 1360 Query: 523 gggctaagaatagcacactggagagcacatcccctggcaacacattcacttgcattcata 582 || ||||| |||||||||| || |||||||||||||||||||||||||| |||||||| Sbjct: 1359 ggactaaggatagcacactccagcgcacatcccctggcaacacattcactcgcattcatt 1300 Query: 583 gttctccttggttcttttccaaagaattcagtaattatcttcattactgcagggacacga 642 || |||||||||||||| |||||||| || || | |||||| |||| ||| ||||||||| Sbjct: 1299 gtcctccttggttctttcccaaagaaatctgtgagtatcttaattattgccgggacacga 1240 Query: 643 gagcctgatccaacaacctcaacaaagtgcagactttctggcgtcaagccagcttctgac 702 || ||||| |||||||| |||||||| || | | | |||| ||| || |||||||||| Sbjct: 1239 gaacctgaaccaacaacttcaacaaaatggacattctctgtcgttaaaccagcttctgct 1180 Query: 703 aatgccttttncagcggccccttcacacgttctagtactggngcactgatctgttcaaac 762 || ||||| | ||| |||||||| |||||||| |||| || ||||| |||| |||||| Sbjct: 1179 aaagccttctccagtggccccttaacacgttccagtattgatgcactaatcttctcaaac 1120 Query: 763 tc 764 || Sbjct: 1119 tc 1118
>dbj|AK100676.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023113C17, full insert sequence Length = 3139 Score = 333 bits (168), Expect = 5e-88 Identities = 493/602 (81%) Strand = Plus / Minus Query: 163 ggaacttccacttcctcctcttccagcatcgttgctgattcaagagagactatcccatgg 222 |||||||||||||||||||| |||| ||| ||||||||||||| | ||| | ||||||| Sbjct: 1719 ggaacttccacttcctcctcctccaacattgttgctgattcaactgtgaccaccccatgg 1660 Query: 223 atgttgaggcgaactttcactttcagtttagccttctcacctttgctagattggaaaggg 282 ||||| ||||| ||||||||||||||||| || || |||||||||| | | |||||| Sbjct: 1659 atgttaaggcggactttcactttcagtttcgctttgtcacctttgccgggattgaaagga 1600 Query: 283 ccgatcgtgtaagtgctaattttgtgtgttatttgcaaatcatctgtgtcaacattcaaa 342 || | |||||||||||| || || ||| ||||||||||||| | || ||||||| | Sbjct: 1599 ccaaccgtgtaagtgctgatctttggtgatatttgcaaatcaccagtatcaacatacgtg 1540 Query: 343 acatccactgcaaatgtactggacctatagaaggtcagagccttgatgctaggcattgga 402 ||||| ||| ||||||| |||||||||||||||||| || || | ||| |||| ||| Sbjct: 1539 acatctacttgaaatgtattggacctatagaaggtcaatgctttaacgctgggcaatggg 1480 Query: 403 ttccccttggggaatacaacagtttgttgggattcattgtcctgagcatctggcttccat 462 || |||||||||||||||||||| |||||| ||| | ||||| ||||| |||||| Sbjct: 1479 ttacccttggggaatacaacagtctgttggttatcaccattctgagagtctggtttccat 1420 Query: 463 gataaagcaactgaaaaaggaaaaccttcattaacctgaaactcccgcactttaaatgtc 522 || | |||| ||| ||||| ||||| ||||||||||||||||| ||||||||||| || Sbjct: 1419 gacattgcaattgagaaagggaaaccatcattaacctgaaactctcgcactttaaaagtg 1360 Query: 523 gggctaagaatagcacactggagagcacatcccctggcaacacattcacttgcattcata 582 || ||||| |||||||||| || |||||||||||||||||||||||||| |||||||| Sbjct: 1359 ggactaaggatagcacactccagcgcacatcccctggcaacacattcactcgcattcatt 1300 Query: 583 gttctccttggttcttttccaaagaattcagtaattatcttcattactgcagggacacga 642 || |||||||||||||| |||||||| || || | |||||| |||| ||| ||||||||| Sbjct: 1299 gtcctccttggttctttcccaaagaaatctgtgagtatcttaattattgccgggacacga 1240 Query: 643 gagcctgatccaacaacctcaacaaagtgcagactttctggcgtcaagccagcttctgac 702 || ||||| |||||| | |||||||| || | | | |||| ||| || |||||||||| Sbjct: 1239 gaacctgaaccaacatcttcaacaaaatggacattctctgtcgttaaaccagcttctgct 1180 Query: 703 aatgccttttncagcggccccttcacacgttctagtactggngcactgatctgttcaaac 762 || ||||| | ||| |||||||| |||||||| |||| || ||||| |||| |||||| Sbjct: 1179 aaagccttctccagtggccccttaacacgttccagtattgatgcactaatcttctcaaac 1120 Query: 763 tc 764 || Sbjct: 1119 tc 1118
>gb|BT018784.1| Zea mays clone EL01N0527D07.d mRNA sequence Length = 2082 Score = 264 bits (133), Expect = 4e-67 Identities = 473/587 (80%) Strand = Plus / Minus Query: 178 tcctcttccagcatcgttgctgattcaagagagactatcccatggatgttgaggcgaact 237 ||||| ||||||||| | ||||| |||| | ||| ||||| ||||||||||| || ||| Sbjct: 764 tcctcctccagcatcatagctgaatcaactgtgacaatcccgtggatgttgagacgcact 705 Query: 238 ttcactttcagtttagccttctcacctttgctagattggaaagggccgatcgtgtaagtg 297 || ||||||||||| ||| ||||||||||| | ||||||||| || || ||||||||| Sbjct: 704 ttaactttcagtttggccctctcacctttggagggttggaaaggtccaattgtgtaagtg 645 Query: 298 ctaattttgtgtgttatttgcaaatcatctgtgtcaacattcaaaacatccactgcaaat 357 || || || |||| |||||| | || |||||| |||| ||||||||| ||| ||||| Sbjct: 644 cttatcttctgtggaatttgcgagtcgcatgtgtccacatacaaaacatcaacttcaaat 585 Query: 358 gtactggacctatagaaggtcagagccttgatgctaggcattggattccccttggggaat 417 |||||||| |||||||||| ||||| || ||||| || ||| ||||||||| || ||| Sbjct: 584 gtactggatttatagaaggttagagctttaatgctgggaattacattcccctttggaaat 525 Query: 418 acaacagtttgttgggattcattgtcctgagcatctggcttccatgataaagcaactgaa 477 |||| || ||||||| | || ||| ||| | ||| | |||||||| || |||| ||| Sbjct: 524 acaagggtctgttggggtgcactgttctgcgagtcttgtttccatgacaatgcaattgag 465 Query: 478 aaaggaaaaccttcattaacctgaaactcccgcactttaaatgtcgggctaagaatagca 537 |||||||| || ||||||||||| || ||||||||||| || || ||||| ||||||||| Sbjct: 464 aaaggaaacccatcattaacctggaattcccgcactttgaaagtggggctgagaatagca 405 Query: 538 cactggagagcacatcccctggcaacacattcacttgcattcatagttctccttggttct 597 |||||||||||||| |||| |||||||| || ||||||||||| |||| || || || Sbjct: 404 cactggagagcacagccccgcgcaacacactcgcttgcattcatggttcgtctcggctcc 345 Query: 598 tttccaaagaattcagtaattatcttcattactgcagggacacgagagcctgatccaaca 657 || ||||| || ||||| |||||||| |||| || || |||||||| || ||||| ||| Sbjct: 344 ttcccaaaaaaatcagtgattatcttgattatggctggaacacgagaaccagatccgaca 285 Query: 658 acctcaacaaagtgcagactttctggcgtcaagccagcttctgacaatgccttttncagc 717 |||||||||||||||| | |||| | |||||||||||||| | ||| ||||| | || Sbjct: 284 acctcaacaaagtgcacattttcagttgtcaagccagcttcagccaaggccttctccaag 225 Query: 718 ggccccttcacacgttctagtactggngcactgatctgttcaaactc 764 || || || |||||| | || || || |||||||| ||||||||||| Sbjct: 224 ggtcctttgacacgtaccagcacaggtgcactgatgtgttcaaactc 178
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 236 bits (119), Expect = 9e-59 Identities = 231/269 (85%) Strand = Plus / Minus Query: 496 acctgaaactcccgcactttaaatgtcgggctaagaatagcacactggagagcacatccc 555 |||| ||| ||||| ||||| || || |||||||||| ||||||||| ||||| |||||| Sbjct: 4821257 acctcaaattcccggactttgaaagtggggctaagaacagcacactgaagagcgcatccc 4821198 Query: 556 ctggcaacacattcacttgcattcatagttctccttggttcttttccaaagaattcagta 615 | ||||||||||||||||||||||||||| ||||| ||||| |||||||| |||||||| Sbjct: 4821197 cgggcaacacattcacttgcattcatagtcctcctcggttcctttccaaaaaattcagtg 4821138 Query: 616 attatcttcattactgcagggacacgagagcctgatccaacaacctcaacaaagtgcaga 675 |||||| | |||| |||||| ||||||||||| ||||||||||||||||||||||||| | Sbjct: 4821137 attatcctgattattgcaggaacacgagagcccgatccaacaacctcaacaaagtgcaca 4821078 Query: 676 ctttctggcgtcaagccagcttctgacaatgccttttncagcggccccttcacacgttct 735 |||||| || ||||||||||| | ||| ||||||| || || |||||||||||| | Sbjct: 4821077 ttttctgttgttaagccagcttcagccaaggccttttccaatggagccttcacacgttgt 4821018 Query: 736 agtactggngcactgatctgttcaaactc 764 || ||||| | |||||||||||| ||||| Sbjct: 4821017 agcactggggaactgatctgttcgaactc 4820989 Score = 93.7 bits (47), Expect = 8e-16 Identities = 80/91 (87%) Strand = Plus / Minus Query: 194 ttgctgattcaagagagactatcccatggatgttgaggcgaactttcactttcagtttag 253 |||||||||||| |||||||||||||||||||||||| | ||||||| |||| ||| | Sbjct: 4822522 ttgctgattcaatagagactatcccatggatgttgagacatgctttcacattcacttttg 4822463 Query: 254 ccttctcacctttgctagattggaaagggcc 284 |||||||| |||||| |||||||||||||| Sbjct: 4822462 ccttctcaggtttgctggattggaaagggcc 4822432 Score = 69.9 bits (35), Expect = 1e-08 Identities = 59/67 (88%) Strand = Plus / Minus Query: 313 atttgcaaatcatctgtgtcaacattcaaaacatccactgcaaatgtactggacctatag 372 |||||||||||||||| || ||| ||| ||| || |||||||||||| ||||||||||| Sbjct: 4822296 atttgcaaatcatctgcatcgacactcacaacgtctactgcaaatgtattggacctatag 4822237 Query: 373 aaggtca 379 ||||||| Sbjct: 4822236 aaggtca 4822230 Score = 48.1 bits (24), Expect = 0.043 Identities = 45/52 (86%) Strand = Plus / Minus Query: 87 agaagcagggtcctgtggtgcatcatctgtctccattgtagtagcatccttt 138 |||||||||||| | ||||||||||||| |||||| ||||| |||||||| Sbjct: 4822711 agaagcagggtcacctagtgcatcatctgtatccattttagtatcatccttt 4822660
>gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0453H11, complete sequence Length = 187956 Score = 236 bits (119), Expect = 9e-59 Identities = 231/269 (85%) Strand = Plus / Minus Query: 496 acctgaaactcccgcactttaaatgtcgggctaagaatagcacactggagagcacatccc 555 |||| ||| ||||| ||||| || || |||||||||| ||||||||| ||||| |||||| Sbjct: 93665 acctcaaattcccggactttgaaagtggggctaagaacagcacactgaagagcgcatccc 93606 Query: 556 ctggcaacacattcacttgcattcatagttctccttggttcttttccaaagaattcagta 615 | ||||||||||||||||||||||||||| ||||| ||||| |||||||| |||||||| Sbjct: 93605 cgggcaacacattcacttgcattcatagtcctcctcggttcctttccaaaaaattcagtg 93546 Query: 616 attatcttcattactgcagggacacgagagcctgatccaacaacctcaacaaagtgcaga 675 |||||| | |||| |||||| ||||||||||| ||||||||||||||||||||||||| | Sbjct: 93545 attatcctgattattgcaggaacacgagagcccgatccaacaacctcaacaaagtgcaca 93486 Query: 676 ctttctggcgtcaagccagcttctgacaatgccttttncagcggccccttcacacgttct 735 |||||| || ||||||||||| | ||| ||||||| || || |||||||||||| | Sbjct: 93485 ttttctgttgttaagccagcttcagccaaggccttttccaatggagccttcacacgttgt 93426 Query: 736 agtactggngcactgatctgttcaaactc 764 || ||||| | |||||||||||| ||||| Sbjct: 93425 agcactggggaactgatctgttcgaactc 93397 Score = 93.7 bits (47), Expect = 8e-16 Identities = 80/91 (87%) Strand = Plus / Minus Query: 194 ttgctgattcaagagagactatcccatggatgttgaggcgaactttcactttcagtttag 253 |||||||||||| |||||||||||||||||||||||| | ||||||| |||| ||| | Sbjct: 94930 ttgctgattcaatagagactatcccatggatgttgagacatgctttcacattcacttttg 94871 Query: 254 ccttctcacctttgctagattggaaagggcc 284 |||||||| |||||| |||||||||||||| Sbjct: 94870 ccttctcaggtttgctggattggaaagggcc 94840 Score = 69.9 bits (35), Expect = 1e-08 Identities = 59/67 (88%) Strand = Plus / Minus Query: 313 atttgcaaatcatctgtgtcaacattcaaaacatccactgcaaatgtactggacctatag 372 |||||||||||||||| || ||| ||| ||| || |||||||||||| ||||||||||| Sbjct: 94704 atttgcaaatcatctgcatcgacactcacaacgtctactgcaaatgtattggacctatag 94645 Query: 373 aaggtca 379 ||||||| Sbjct: 94644 aaggtca 94638 Score = 48.1 bits (24), Expect = 0.043 Identities = 45/52 (86%) Strand = Plus / Minus Query: 87 agaagcagggtcctgtggtgcatcatctgtctccattgtagtagcatccttt 138 |||||||||||| | ||||||||||||| |||||| ||||| |||||||| Sbjct: 95119 agaagcagggtcacctagtgcatcatctgtatccattttagtatcatccttt 95068
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 188 bits (95), Expect = 2e-44 Identities = 225/269 (83%) Strand = Plus / Minus Query: 496 acctgaaactcccgcactttaaatgtcgggctaagaatagcacactggagagcacatccc 555 ||||||||||| ||||||||||| || || ||||| |||||||||| || ||||||||| Sbjct: 4254655 acctgaaactctcgcactttaaaagtgggactaaggatagcacactccagcgcacatccc 4254596 Query: 556 ctggcaacacattcacttgcattcatagttctccttggttcttttccaaagaattcagta 615 ||||||||||||||||| |||||||| || |||||||||||||| |||||||| || || Sbjct: 4254595 ctggcaacacattcactcgcattcattgtcctccttggttctttcccaaagaaatctgtg 4254536 Query: 616 attatcttcattactgcagggacacgagagcctgatccaacaacctcaacaaagtgcaga 675 | |||||| |||| ||| ||||||||||| ||||| |||||||| |||||||| || | | Sbjct: 4254535 agtatcttaattattgccgggacacgagaacctgaaccaacaacttcaacaaaatggaca 4254476 Query: 676 ctttctggcgtcaagccagcttctgacaatgccttttncagcggccccttcacacgttct 735 | |||| ||| || |||||||||| || ||||| | ||| |||||||| |||||||| Sbjct: 4254475 ttctctgtcgttaaaccagcttctgctaaagccttctccagtggccccttaacacgttcc 4254416 Query: 736 agtactggngcactgatctgttcaaactc 764 |||| || ||||| |||| |||||||| Sbjct: 4254415 agtattgatgcactaatcttctcaaactc 4254387 Score = 81.8 bits (41), Expect = 3e-12 Identities = 119/145 (82%) Strand = Plus / Minus Query: 288 cgtgtaagtgctaattttgtgtgttatttgcaaatcatctgtgtcaacattcaaaacatc 347 |||||||||||| || || ||| ||||||||||||| | || ||||||| | ||||| Sbjct: 4255735 cgtgtaagtgctgatctttggtgatatttgcaaatcaccagtatcaacatacgtgacatc 4255676 Query: 348 cactgcaaatgtactggacctatagaaggtcagagccttgatgctaggcattggattccc 407 ||| ||||||| |||||||||||||||||| || || | ||| |||| ||| || || Sbjct: 4255675 tacttgaaatgtattggacctatagaaggtcaatgctttaacgctgggcaatgggttacc 4255616 Query: 408 cttggggaatacaacagtttgttgg 432 |||||||||||||||||| |||||| Sbjct: 4255615 cttggggaatacaacagtctgttgg 4255591 Score = 71.9 bits (36), Expect = 3e-09 Identities = 66/76 (86%) Strand = Plus / Minus Query: 193 gttgctgattcaagagagactatcccatggatgttgaggcgaactttcactttcagttta 252 ||||||||||||| | ||| | |||||||||||| ||||| ||||||||||||||||| Sbjct: 4255936 gttgctgattcaactgtgaccaccccatggatgttaaggcggactttcactttcagtttc 4255877 Query: 253 gccttctcacctttgc 268 || || |||||||||| Sbjct: 4255876 gctttgtcacctttgc 4255861 Score = 44.1 bits (22), Expect = 0.67 Identities = 28/30 (93%) Strand = Plus / Minus Query: 163 ggaacttccacttcctcctcttccagcatc 192 |||||||||||||||||||| |||| |||| Sbjct: 4256062 ggaacttccacttcctcctcctccaacatc 4256033
>dbj|AP003118.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1174_D05 Length = 128525 Score = 188 bits (95), Expect = 2e-44 Identities = 225/269 (83%) Strand = Plus / Minus Query: 496 acctgaaactcccgcactttaaatgtcgggctaagaatagcacactggagagcacatccc 555 ||||||||||| ||||||||||| || || ||||| |||||||||| || ||||||||| Sbjct: 92622 acctgaaactctcgcactttaaaagtgggactaaggatagcacactccagcgcacatccc 92563 Query: 556 ctggcaacacattcacttgcattcatagttctccttggttcttttccaaagaattcagta 615 ||||||||||||||||| |||||||| || |||||||||||||| |||||||| || || Sbjct: 92562 ctggcaacacattcactcgcattcattgtcctccttggttctttcccaaagaaatctgtg 92503 Query: 616 attatcttcattactgcagggacacgagagcctgatccaacaacctcaacaaagtgcaga 675 | |||||| |||| ||| ||||||||||| ||||| |||||||| |||||||| || | | Sbjct: 92502 agtatcttaattattgccgggacacgagaacctgaaccaacaacttcaacaaaatggaca 92443 Query: 676 ctttctggcgtcaagccagcttctgacaatgccttttncagcggccccttcacacgttct 735 | |||| ||| || |||||||||| || ||||| | ||| |||||||| |||||||| Sbjct: 92442 ttctctgtcgttaaaccagcttctgctaaagccttctccagtggccccttaacacgttcc 92383 Query: 736 agtactggngcactgatctgttcaaactc 764 |||| || ||||| |||| |||||||| Sbjct: 92382 agtattgatgcactaatcttctcaaactc 92354 Score = 81.8 bits (41), Expect = 3e-12 Identities = 119/145 (82%) Strand = Plus / Minus Query: 288 cgtgtaagtgctaattttgtgtgttatttgcaaatcatctgtgtcaacattcaaaacatc 347 |||||||||||| || || ||| ||||||||||||| | || ||||||| | ||||| Sbjct: 93702 cgtgtaagtgctgatctttggtgatatttgcaaatcaccagtatcaacatacgtgacatc 93643 Query: 348 cactgcaaatgtactggacctatagaaggtcagagccttgatgctaggcattggattccc 407 ||| ||||||| |||||||||||||||||| || || | ||| |||| ||| || || Sbjct: 93642 tacttgaaatgtattggacctatagaaggtcaatgctttaacgctgggcaatgggttacc 93583 Query: 408 cttggggaatacaacagtttgttgg 432 |||||||||||||||||| |||||| Sbjct: 93582 cttggggaatacaacagtctgttgg 93558 Score = 71.9 bits (36), Expect = 3e-09 Identities = 66/76 (86%) Strand = Plus / Minus Query: 193 gttgctgattcaagagagactatcccatggatgttgaggcgaactttcactttcagttta 252 ||||||||||||| | ||| | |||||||||||| ||||| ||||||||||||||||| Sbjct: 93903 gttgctgattcaactgtgaccaccccatggatgttaaggcggactttcactttcagtttc 93844 Query: 253 gccttctcacctttgc 268 || || |||||||||| Sbjct: 93843 gctttgtcacctttgc 93828 Score = 44.1 bits (22), Expect = 0.67 Identities = 28/30 (93%) Strand = Plus / Minus Query: 163 ggaacttccacttcctcctcttccagcatc 192 |||||||||||||||||||| |||| |||| Sbjct: 94029 ggaacttccacttcctcctcctccaacatc 94000
>dbj|AP003047.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0666G04 Length = 141983 Score = 188 bits (95), Expect = 2e-44 Identities = 225/269 (83%) Strand = Plus / Minus Query: 496 acctgaaactcccgcactttaaatgtcgggctaagaatagcacactggagagcacatccc 555 ||||||||||| ||||||||||| || || ||||| |||||||||| || ||||||||| Sbjct: 34425 acctgaaactctcgcactttaaaagtgggactaaggatagcacactccagcgcacatccc 34366 Query: 556 ctggcaacacattcacttgcattcatagttctccttggttcttttccaaagaattcagta 615 ||||||||||||||||| |||||||| || |||||||||||||| |||||||| || || Sbjct: 34365 ctggcaacacattcactcgcattcattgtcctccttggttctttcccaaagaaatctgtg 34306 Query: 616 attatcttcattactgcagggacacgagagcctgatccaacaacctcaacaaagtgcaga 675 | |||||| |||| ||| ||||||||||| ||||| |||||||| |||||||| || | | Sbjct: 34305 agtatcttaattattgccgggacacgagaacctgaaccaacaacttcaacaaaatggaca 34246 Query: 676 ctttctggcgtcaagccagcttctgacaatgccttttncagcggccccttcacacgttct 735 | |||| ||| || |||||||||| || ||||| | ||| |||||||| |||||||| Sbjct: 34245 ttctctgtcgttaaaccagcttctgctaaagccttctccagtggccccttaacacgttcc 34186 Query: 736 agtactggngcactgatctgttcaaactc 764 |||| || ||||| |||| |||||||| Sbjct: 34185 agtattgatgcactaatcttctcaaactc 34157 Score = 81.8 bits (41), Expect = 3e-12 Identities = 119/145 (82%) Strand = Plus / Minus Query: 288 cgtgtaagtgctaattttgtgtgttatttgcaaatcatctgtgtcaacattcaaaacatc 347 |||||||||||| || || ||| ||||||||||||| | || ||||||| | ||||| Sbjct: 35505 cgtgtaagtgctgatctttggtgatatttgcaaatcaccagtatcaacatacgtgacatc 35446 Query: 348 cactgcaaatgtactggacctatagaaggtcagagccttgatgctaggcattggattccc 407 ||| ||||||| |||||||||||||||||| || || | ||| |||| ||| || || Sbjct: 35445 tacttgaaatgtattggacctatagaaggtcaatgctttaacgctgggcaatgggttacc 35386 Query: 408 cttggggaatacaacagtttgttgg 432 |||||||||||||||||| |||||| Sbjct: 35385 cttggggaatacaacagtctgttgg 35361 Score = 71.9 bits (36), Expect = 3e-09 Identities = 66/76 (86%) Strand = Plus / Minus Query: 193 gttgctgattcaagagagactatcccatggatgttgaggcgaactttcactttcagttta 252 ||||||||||||| | ||| | |||||||||||| ||||| ||||||||||||||||| Sbjct: 35706 gttgctgattcaactgtgaccaccccatggatgttaaggcggactttcactttcagtttc 35647 Query: 253 gccttctcacctttgc 268 || || |||||||||| Sbjct: 35646 gctttgtcacctttgc 35631 Score = 44.1 bits (22), Expect = 0.67 Identities = 28/30 (93%) Strand = Plus / Minus Query: 163 ggaacttccacttcctcctcttccagcatc 192 |||||||||||||||||||| |||| |||| Sbjct: 35832 ggaacttccacttcctcctcctccaacatc 35803
>gb|AY103680.1| Zea mays PCO080984 mRNA sequence Length = 1931 Score = 168 bits (85), Expect = 2e-38 Identities = 250/303 (82%), Gaps = 1/303 (0%) Strand = Plus / Minus Query: 457 ttccatgataaagcaactgaaaaaggaaaaccttcattaacctgaaactcccgcacttta 516 |||||||| || |||| ||| |||||||| || ||||||||||| || || |||||||| Sbjct: 318 ttccatgacaatgcaattgagaaaggaaacccatcattaacctggaattctcgcactttg 259 Query: 517 aatgtcgggctaagaatagcacactggagagcacatcccctggcaacacattcacttgca 576 || || ||||| |||||||||||||| ||||||||||| | |||||||| ||||||||| Sbjct: 258 aaagtggggctgagaatagcacactgaagagcacatcctcgcgcaacacactcacttgca 199 Query: 577 ttcatagttctccttggttcttttccaaagaattcagtaattatcttcattactgcaggg 636 ||||| |||| ||||| || || ||||| || ||||| |||||||| |||| || || Sbjct: 198 ttcatggttcgtcttggctccttcccaaaaaaatcagttattatcttgattatagccgga 139 Query: 637 acacgagagcctgatccaacaacctcaacaaagtgcagactttctggcgtcaagccagct 696 |||||||| || ||||||||||||||||||||||||| | |||| | ||||| |||||| Sbjct: 138 acacgagaaccagatccaacaacctcaacaaagtgcacattttcagtagtcaacccagct 79 Query: 697 tctgacaatgcctttt-ncagcggccccttcacacgttctagtactggngcactgatctg 755 || | ||| ||||||| |||| || || ||||| ||||| || || | ||||||||||| Sbjct: 78 tcagccaaggccttttcncagtggtcctttcacgcgttccagcaccgaggcactgatctg 19 Query: 756 ttc 758 ||| Sbjct: 18 ttc 16 Score = 133 bits (67), Expect = 9e-28 Identities = 181/219 (82%) Strand = Plus / Minus Query: 215 tcccatggatgttgaggcgaactttcactttcagtttagccttctcacctttgctagatt 274 |||||||||||||||| || ||||||||||||||||| |||||||| |||||| | || Sbjct: 557 tcccatggatgttgagacgcactttcactttcagtttggccttctctcctttggaggttt 498 Query: 275 ggaaagggccgatcgtgtaagtgctaattttgtgtgttatttgcaaatcatctgtgtcaa 334 |||||||||| || ||||| ||||| ||||| |||| ||||| || | | || ||| | Sbjct: 497 ggaaagggccaattgtgtatgtgcttattttttgtggaatttgtaagccgtttgggtcga 438 Query: 335 cattcaaaacatccactgcaaatgtactggacctatagaaggtcagagccttgatgctag 394 ||| ||||||||| ||| ||||||||||||| || ||||||| ||| | || |||||| Sbjct: 437 catacaaaacatcaacttcaaatgtactggatttaaagaaggtaagaactttagtgctag 378 Query: 395 gcattggattccccttggggaatacaacagtttgttggg 433 | |||| ||||||||| |||||||||| |||||||||| Sbjct: 377 gaattgcattcccctttgggaatacaagggtttgttggg 339
>emb|Z70314.1|ATHSP91 A.thaliana mRNA for heat-shock protein Length = 2923 Score = 79.8 bits (40), Expect = 1e-11 Identities = 142/176 (80%) Strand = Plus / Minus Query: 490 tcattaacctgaaactcccgcactttaaatgtcgggctaagaatagcacactggagagca 549 |||| ||||||||| || || |||||||| ||||| || ||||| |||||||| | ||| Sbjct: 1331 tcatgaacctgaaattcgcgaactttaaaggtcggactgagaatggcacactgcaaggca 1272 Query: 550 catcccctggcaacacattcacttgcattcatagttctccttggttcttttccaaagaat 609 |||||||| | ||||| |||||||||||||| || | ||| || || || ||||| || Sbjct: 1271 catccccttgacacacactcacttgcattcattgtacgcctgggctccttaccaaaaaac 1212 Query: 610 tcagtaattatcttcattactgcagggacacgagagcctgatccaacaacctcaac 665 ||||| | ||||| || | ||||||||||||||||| || |||| ||||||||| Sbjct: 1211 tcagttagaatcttgatcatagcagggacacgagagccagagccaataacctcaac 1156
>ref|NM_106642.3| Arabidopsis thaliana HSP91 AT1G79930 (HSP91) transcript variant AT1G79930.1 mRNA, complete cds Length = 2949 Score = 71.9 bits (36), Expect = 3e-09 Identities = 141/176 (80%) Strand = Plus / Minus Query: 490 tcattaacctgaaactcccgcactttaaatgtcgggctaagaatagcacactggagagca 549 |||| |||||| || || || |||||||| ||||| || ||||| |||||||| | ||| Sbjct: 1328 tcatgaacctggaattcgcgaactttaaaggtcggactgagaatggcacactgcaaggca 1269 Query: 550 catcccctggcaacacattcacttgcattcatagttctccttggttcttttccaaagaat 609 |||||||| | ||||| |||||||||||||| || | ||| || || || ||||| || Sbjct: 1268 catccccttgacacacactcacttgcattcattgtccgcctgggctccttaccaaaaaac 1209 Query: 610 tcagtaattatcttcattactgcagggacacgagagcctgatccaacaacctcaac 665 ||||| | ||||| || | ||||||||||||||||| || |||| ||||||||| Sbjct: 1208 tcagttagaatcttgatcatagcagggacacgagagccagagccaataacctcaac 1153
>ref|NM_001036228.1| Arabidopsis thaliana HSP91 AT1G79930 (HSP91) transcript variant AT1G79930.2 mRNA, complete cds Length = 3012 Score = 71.9 bits (36), Expect = 3e-09 Identities = 141/176 (80%) Strand = Plus / Minus Query: 490 tcattaacctgaaactcccgcactttaaatgtcgggctaagaatagcacactggagagca 549 |||| |||||| || || || |||||||| ||||| || ||||| |||||||| | ||| Sbjct: 1372 tcatgaacctggaattcgcgaactttaaaggtcggactgagaatggcacactgcaaggca 1313 Query: 550 catcccctggcaacacattcacttgcattcatagttctccttggttcttttccaaagaat 609 |||||||| | ||||| |||||||||||||| || | ||| || || || ||||| || Sbjct: 1312 catccccttgacacacactcacttgcattcattgtccgcctgggctccttaccaaaaaac 1253 Query: 610 tcagtaattatcttcattactgcagggacacgagagcctgatccaacaacctcaac 665 ||||| | ||||| || | ||||||||||||||||| || |||| ||||||||| Sbjct: 1252 tcagttagaatcttgatcatagcagggacacgagagccagagccaataacctcaac 1197
>gb|AY079015.1| Arabidopsis thaliana At1g79930/F19K16_11 mRNA, complete cds Length = 2798 Score = 71.9 bits (36), Expect = 3e-09 Identities = 141/176 (80%) Strand = Plus / Minus Query: 490 tcattaacctgaaactcccgcactttaaatgtcgggctaagaatagcacactggagagca 549 |||| |||||| || || || |||||||| ||||| || ||||| |||||||| | ||| Sbjct: 1328 tcatgaacctggaattcgcgaactttaaaggtcggactgagaatggcacactgcaaggca 1269 Query: 550 catcccctggcaacacattcacttgcattcatagttctccttggttcttttccaaagaat 609 |||||||| | ||||| |||||||||||||| || | ||| || || || ||||| || Sbjct: 1268 catccccttgacacacactcacttgcattcattgtccgcctgggctccttaccaaaaaac 1209 Query: 610 tcagtaattatcttcattactgcagggacacgagagcctgatccaacaacctcaac 665 ||||| | ||||| || | ||||||||||||||||| || |||| ||||||||| Sbjct: 1208 tcagttagaatcttgatcatagcagggacacgagagccagagccaataacctcaac 1153
>gb|BT002625.1| Arabidopsis thaliana At1g79930/F19K16_11 gene, complete cds Length = 2496 Score = 71.9 bits (36), Expect = 3e-09 Identities = 141/176 (80%) Strand = Plus / Minus Query: 490 tcattaacctgaaactcccgcactttaaatgtcgggctaagaatagcacactggagagca 549 |||| |||||| || || || |||||||| ||||| || ||||| |||||||| | ||| Sbjct: 1178 tcatgaacctggaattcgcgaactttaaaggtcggactgagaatggcacactgcaaggca 1119 Query: 550 catcccctggcaacacattcacttgcattcatagttctccttggttcttttccaaagaat 609 |||||||| | ||||| |||||||||||||| || | ||| || || || ||||| || Sbjct: 1118 catccccttgacacacactcacttgcattcattgtccgcctgggctccttaccaaaaaac 1059 Query: 610 tcagtaattatcttcattactgcagggacacgagagcctgatccaacaacctcaac 665 ||||| | ||||| || | ||||||||||||||||| || |||| ||||||||| Sbjct: 1058 tcagttagaatcttgatcatagcagggacacgagagccagagccaataacctcaac 1003
>gb|AC011717.6|AC011717 Arabidopsis thaliana chromosome 1 BAC F19K16 genomic sequence, complete sequence Length = 111301 Score = 69.9 bits (35), Expect = 1e-08 Identities = 125/155 (80%) Strand = Plus / Minus Query: 511 actttaaatgtcgggctaagaatagcacactggagagcacatcccctggcaacacattca 570 |||||||| ||||| || ||||| |||||||| | ||||||||||| | ||||| ||| Sbjct: 38269 actttaaaggtcggactgagaatggcacactgcaaggcacatccccttgacacacactca 38210 Query: 571 cttgcattcatagttctccttggttcttttccaaagaattcagtaattatcttcattact 630 ||||||||||| || | ||| || || || ||||| || ||||| | ||||| || | Sbjct: 38209 cttgcattcattgtccgcctgggctccttaccaaaaaactcagttagaatcttgatcata 38150 Query: 631 gcagggacacgagagcctgatccaacaacctcaac 665 ||||||||||||||||| || |||| ||||||||| Sbjct: 38149 gcagggacacgagagccagagccaataacctcaac 38115 Score = 63.9 bits (32), Expect = 7e-07 Identities = 122/152 (80%) Strand = Plus / Minus Query: 511 actttaaatgtcgggctaagaatagcacactggagagcacatcccctggcaacacattca 570 |||||||| ||||| || ||||| |||||||| | ||||||||||| | ||||| ||| Sbjct: 43112 actttaaaggtcggactgagaatggcacactgcaaggcacatcccctcgacacacactca 43053 Query: 571 cttgcattcatagttctccttggttcttttccaaagaattcagtaattatcttcattact 630 ||||||||||| || | ||| || || || ||||| || ||||| | ||||| || | Sbjct: 43052 cttgcattcattgtacgcctgggctccttaccaaaaaactcagttagaatcttgatcata 42993 Query: 631 gcagggacacgagagcctgatccaacaacctc 662 ||||||||||||||||| || || |||||||| Sbjct: 42992 gcagggacacgagagccagagccgacaacctc 42961 Score = 44.1 bits (22), Expect = 0.67 Identities = 61/74 (82%) Strand = Plus / Minus Query: 193 gttgctgattcaagagagactatcccatggatgttgaggcgaactttcactttcagttta 252 ||||||||||||| |||||| || ||||| | ||| | | ||||||||||||||| || Sbjct: 43650 gttgctgattcaacagagacaattccatgcaggttcaatctaactttcactttcagcttt 43591 Query: 253 gccttctcaccttt 266 ||| |||| ||||| Sbjct: 43590 gccctctcgccttt 43577
>gb|AC009322.1|AC009322 Arabidopsis thaliana chromosome I BAC F18B13 genomic sequence, complete sequence Length = 116905 Score = 69.9 bits (35), Expect = 1e-08 Identities = 125/155 (80%) Strand = Plus / Plus Query: 511 actttaaatgtcgggctaagaatagcacactggagagcacatcccctggcaacacattca 570 |||||||| ||||| || ||||| |||||||| | ||||||||||| | ||||| ||| Sbjct: 2675 actttaaaggtcggactgagaatggcacactgcaaggcacatccccttgacacacactca 2734 Query: 571 cttgcattcatagttctccttggttcttttccaaagaattcagtaattatcttcattact 630 ||||||||||| || | ||| || || || ||||| || ||||| | ||||| || | Sbjct: 2735 cttgcattcattgtccgcctgggctccttaccaaaaaactcagttagaatcttgatcata 2794 Query: 631 gcagggacacgagagcctgatccaacaacctcaac 665 ||||||||||||||||| || |||| ||||||||| Sbjct: 2795 gcagggacacgagagccagagccaataacctcaac 2829
>ref|NM_180653.1| Arabidopsis thaliana ATP binding AT1G79920 transcript variant AT1G79920.1 mRNA, complete cds Length = 2941 Score = 65.9 bits (33), Expect = 2e-07 Identities = 138/173 (79%) Strand = Plus / Minus Query: 490 tcattaacctgaaactcccgcactttaaatgtcgggctaagaatagcacactggagagca 549 |||| |||||| || || || |||||||| ||||| || ||||| |||||||| | ||| Sbjct: 1321 tcatgaacctggaattcgcgaactttaaaggtcggactgagaatggcacactgcaaggca 1262 Query: 550 catcccctggcaacacattcacttgcattcatagttctccttggttcttttccaaagaat 609 |||||||| | ||||| |||||||||||||| || | ||| || || || ||||| || Sbjct: 1261 catcccctcgacacacactcacttgcattcattgtacgcctgggctccttaccaaaaaac 1202 Query: 610 tcagtaattatcttcattactgcagggacacgagagcctgatccaacaacctc 662 ||||| | ||||| || | ||||||||||||||||| || || |||||||| Sbjct: 1201 tcagttagaatcttgatcatagcagggacacgagagccagagccgacaacctc 1149 Score = 50.1 bits (25), Expect = 0.011 Identities = 82/101 (81%) Strand = Plus / Minus Query: 166 acttccacttcctcctcttccagcatcgttgctgattcaagagagactatcccatggatg 225 ||||| ||||| |||||||||| | ||||||||||||| |||||| || ||||| | | Sbjct: 1663 acttcaacttcttcctcttccaaaagagttgctgattcaacagagacaattccatgcagg 1604 Query: 226 ttgaggcgaactttcactttcagtttagccttctcaccttt 266 || | | ||||||||||||||| || ||| |||| ||||| Sbjct: 1603 ttcaatctaactttcactttcagctttgccctctcgccttt 1563
>ref|NM_106641.3| Arabidopsis thaliana ATP binding AT1G79920 transcript variant AT1G79920.2 mRNA, complete cds Length = 2941 Score = 65.9 bits (33), Expect = 2e-07 Identities = 138/173 (79%) Strand = Plus / Minus Query: 490 tcattaacctgaaactcccgcactttaaatgtcgggctaagaatagcacactggagagca 549 |||| |||||| || || || |||||||| ||||| || ||||| |||||||| | ||| Sbjct: 1321 tcatgaacctggaattcgcgaactttaaaggtcggactgagaatggcacactgcaaggca 1262 Query: 550 catcccctggcaacacattcacttgcattcatagttctccttggttcttttccaaagaat 609 |||||||| | ||||| |||||||||||||| || | ||| || || || ||||| || Sbjct: 1261 catcccctcgacacacactcacttgcattcattgtacgcctgggctccttaccaaaaaac 1202 Query: 610 tcagtaattatcttcattactgcagggacacgagagcctgatccaacaacctc 662 ||||| | ||||| || | ||||||||||||||||| || || |||||||| Sbjct: 1201 tcagttagaatcttgatcatagcagggacacgagagccagagccgacaacctc 1149 Score = 50.1 bits (25), Expect = 0.011 Identities = 82/101 (81%) Strand = Plus / Minus Query: 166 acttccacttcctcctcttccagcatcgttgctgattcaagagagactatcccatggatg 225 ||||| ||||| |||||||||| | ||||||||||||| |||||| || ||||| | | Sbjct: 1663 acttcaacttcttcctcttccaaaagagttgctgattcaacagagacaattccatgcagg 1604 Query: 226 ttgaggcgaactttcactttcagtttagccttctcaccttt 266 || | | ||||||||||||||| || ||| |||| ||||| Sbjct: 1603 ttcaatctaactttcactttcagctttgccctctcgccttt 1563
>gb|BT000810.1| Arabidopsis thaliana At1g79920 mRNA sequence Length = 2952 Score = 65.9 bits (33), Expect = 2e-07 Identities = 138/173 (79%) Strand = Plus / Minus Query: 490 tcattaacctgaaactcccgcactttaaatgtcgggctaagaatagcacactggagagca 549 |||| |||||| || || || |||||||| ||||| || ||||| |||||||| | ||| Sbjct: 1314 tcatgaacctggaattcgcgaactttaaaggtcggactgagaatggcacactgcaaggca 1255 Query: 550 catcccctggcaacacattcacttgcattcatagttctccttggttcttttccaaagaat 609 |||||||| | ||||| |||||||||||||| || | ||| || || || ||||| || Sbjct: 1254 catcccctcgacacacactcacttgcattcattgtacgcctgggctccttaccaaaaaac 1195 Query: 610 tcagtaattatcttcattactgcagggacacgagagcctgatccaacaacctc 662 ||||| | ||||| || | ||||||||||||||||| || || |||||||| Sbjct: 1194 tcagttagaatcttgatcatagcagggacacgagagccagagccgacaacctc 1142 Score = 50.1 bits (25), Expect = 0.011 Identities = 82/101 (81%) Strand = Plus / Minus Query: 166 acttccacttcctcctcttccagcatcgttgctgattcaagagagactatcccatggatg 225 ||||| ||||| |||||||||| | ||||||||||||| |||||| || ||||| | | Sbjct: 1656 acttcaacttcttcctcttccaaaagagttgctgattcaacagagacaattccatgcagg 1597 Query: 226 ttgaggcgaactttcactttcagtttagccttctcaccttt 266 || | | ||||||||||||||| || ||| |||| ||||| Sbjct: 1596 ttcaatctaactttcactttcagctttgccctctcgccttt 1556
>gb|AY065177.1| Arabidopsis thaliana putative heat-shock protein (At1g79920; F19K16.12) mRNA, complete cds Length = 2850 Score = 65.9 bits (33), Expect = 2e-07 Identities = 138/173 (79%) Strand = Plus / Minus Query: 490 tcattaacctgaaactcccgcactttaaatgtcgggctaagaatagcacactggagagca 549 |||| |||||| || || || |||||||| ||||| || ||||| |||||||| | ||| Sbjct: 1321 tcatgaacctggaattcgcgaactttaaaggtcggactgagaatggcacactgcaaggca 1262 Query: 550 catcccctggcaacacattcacttgcattcatagttctccttggttcttttccaaagaat 609 |||||||| | ||||| |||||||||||||| || | ||| || || || ||||| || Sbjct: 1261 catcccctcgacacacactcacttgcattcattgtacgcctgggctccttaccaaaaaac 1202 Query: 610 tcagtaattatcttcattactgcagggacacgagagcctgatccaacaacctc 662 ||||| | ||||| || | ||||||||||||||||| || || |||||||| Sbjct: 1201 tcagttagaatcttgatcatagcagggacacgagagccagagccgacaacctc 1149 Score = 50.1 bits (25), Expect = 0.011 Identities = 82/101 (81%) Strand = Plus / Minus Query: 166 acttccacttcctcctcttccagcatcgttgctgattcaagagagactatcccatggatg 225 ||||| ||||| |||||||||| | ||||||||||||| |||||| || ||||| | | Sbjct: 1663 acttcaacttcttcctcttccaaaagagttgctgattcaacagagacaattccatgcagg 1604 Query: 226 ttgaggcgaactttcactttcagtttagccttctcaccttt 266 || | | ||||||||||||||| || ||| |||| ||||| Sbjct: 1603 ttcaatctaactttcactttcagctttgccctctcgccttt 1563
>gb|CP000024.1| Streptococcus thermophilus CNRZ1066, complete genome Length = 1796226 Score = 46.1 bits (23), Expect = 0.17 Identities = 23/23 (100%) Strand = Plus / Minus Query: 462 tgataaagcaactgaaaaaggaa 484 ||||||||||||||||||||||| Sbjct: 1355237 tgataaagcaactgaaaaaggaa 1355215
>gb|AC153571.14| Mus musculus 10 BAC RP23-309H16 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 184967 Score = 46.1 bits (23), Expect = 0.17 Identities = 23/23 (100%) Strand = Plus / Minus Query: 80 cagcactagaagcagggtcctgt 102 ||||||||||||||||||||||| Sbjct: 97753 cagcactagaagcagggtcctgt 97731
>gb|AC129557.10| Mus musculus chromosome 19, clone RP24-245F23, complete sequence Length = 174415 Score = 46.1 bits (23), Expect = 0.17 Identities = 26/27 (96%) Strand = Plus / Minus Query: 554 ccctggcaacacattcacttgcattca 580 |||||||||||||||||||| |||||| Sbjct: 28017 ccctggcaacacattcactttcattca 27991
>gb|CP000023.1| Streptococcus thermophilus LMG 18311, complete genome Length = 1796846 Score = 46.1 bits (23), Expect = 0.17 Identities = 23/23 (100%) Strand = Plus / Minus Query: 462 tgataaagcaactgaaaaaggaa 484 ||||||||||||||||||||||| Sbjct: 1347597 tgataaagcaactgaaaaaggaa 1347575
>gb|AC018489.7| Drosophila melanogaster clone BACR19G19, complete sequence Length = 179077 Score = 44.1 bits (22), Expect = 0.67 Identities = 22/22 (100%) Strand = Plus / Minus Query: 298 ctaattttgtgtgttatttgca 319 |||||||||||||||||||||| Sbjct: 65089 ctaattttgtgtgttatttgca 65068
>gb|BC065970.1| Danio rerio heat shock protein 4, mRNA (cDNA clone MGC:77413 IMAGE:6970126), complete cds Length = 3025 Score = 44.1 bits (22), Expect = 0.67 Identities = 25/26 (96%) Strand = Plus / Minus Query: 535 gcacactggagagcacatcccctggc 560 |||||||||||||||||||| ||||| Sbjct: 1287 gcacactggagagcacatcctctggc 1262
>ref|NM_199857.1| Danio rerio heat shock protein 4 (hspa4), mRNA Length = 2979 Score = 44.1 bits (22), Expect = 0.67 Identities = 25/26 (96%) Strand = Plus / Minus Query: 535 gcacactggagagcacatcccctggc 560 |||||||||||||||||||| ||||| Sbjct: 1258 gcacactggagagcacatcctctggc 1233
>gb|BC048063.1| Danio rerio heat shock protein 4, mRNA (cDNA clone MGC:55743 IMAGE:3816385), complete cds Length = 2979 Score = 44.1 bits (22), Expect = 0.67 Identities = 25/26 (96%) Strand = Plus / Minus Query: 535 gcacactggagagcacatcccctggc 560 |||||||||||||||||||| ||||| Sbjct: 1258 gcacactggagagcacatcctctggc 1233
>gb|AE003503.4| Drosophila melanogaster chromosome X, section 55 of 74 of the complete sequence Length = 300468 Score = 44.1 bits (22), Expect = 0.67 Identities = 22/22 (100%) Strand = Plus / Plus Query: 298 ctaattttgtgtgttatttgca 319 |||||||||||||||||||||| Sbjct: 266936 ctaattttgtgtgttatttgca 266957
>emb|CR626909.11| Zebrafish DNA sequence from clone DKEY-78D3 in linkage group 15, complete sequence Length = 96878 Score = 44.1 bits (22), Expect = 0.67 Identities = 22/22 (100%) Strand = Plus / Plus Query: 293 aagtgctaattttgtgtgttat 314 |||||||||||||||||||||| Sbjct: 30356 aagtgctaattttgtgtgttat 30377
>gb|AC131747.5| Mus musculus BAC clone RP23-36O24 from chromosome 14, complete sequence Length = 212930 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 172 acttcctcctcttccagcatc 192 ||||||||||||||||||||| Sbjct: 70215 acttcctcctcttccagcatc 70195
>ref|XM_513540.1| PREDICTED: Pan troglodytes similar to kynurenine aminotransferase III (LOC456999), mRNA Length = 4467 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 169 tccacttcctcctcttccagc 189 ||||||||||||||||||||| Sbjct: 1311 tccacttcctcctcttccagc 1291
>gb|AC164974.2| Pan troglodytes BAC clone CH251-565G22 from chromosome 4, complete sequence Length = 210224 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 303 tttgtgtgttatttgcaaatc 323 ||||||||||||||||||||| Sbjct: 133917 tttgtgtgttatttgcaaatc 133937
>ref|NM_019610.3| Homo sapiens RNA binding motif protein, X-linked-like 1 (RBMXL1), mRNA Length = 3877 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 169 tccacttcctcctcttccagc 189 ||||||||||||||||||||| Sbjct: 840 tccacttcctcctcttccagc 820
>gb|AF039043.1| Caenorhabditis elegans cosmid F39C12, complete sequence Length = 40233 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 167 cttccacttcctcctcttcca 187 ||||||||||||||||||||| Sbjct: 12164 cttccacttcctcctcttcca 12184
>emb|AL592309.24| Human DNA sequence from clone RP11-293F5 on chromosome 1 Contains a novel gene, a novel pseudogene, a novel gene similar to heparan sulfate 6-O-sulfotransferase 1 (HS6ST1), a pseudogene similar to part of a novel gene, the gene for a hypothetical protein AE2, a profilin 1 (PFN1) pseudogene, the 5' end of the ALPL gene for alkaline phosphatase, liver/bone/kidney and a CpG island, complete sequence Length = 206231 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 471 aactgaaaaaggaaaaccttc 491 ||||||||||||||||||||| Sbjct: 82973 aactgaaaaaggaaaaccttc 82953
>emb|AL139416.5| Human DNA sequence from clone RP4-531M19 on chromosome 1 Contains the 5' end of the gene for a novel protein (FLJ32614), the gene for a novel protein similar to X-linked RNA binding motif protein (RBMX) (DKFZp547N1117), the 3' end of the GBP3 gene for guanylate binding protein 3 and a CpG island, complete sequence Length = 34250 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 169 tccacttcctcctcttccagc 189 ||||||||||||||||||||| Sbjct: 6357 tccacttcctcctcttccagc 6377
>emb|AL136167.8| Human DNA sequence from clone RP1-299I16 on chromosome Xq26.1-27.3 Contains part of the GPR112 gene for G protein-coupled receptor 112, complete sequence Length = 63946 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 340 aaaacatccactgcaaatgta 360 ||||||||||||||||||||| Sbjct: 21046 aaaacatccactgcaaatgta 21026
>emb|AL832554.1|HSM803863 Homo sapiens mRNA; cDNA DKFZp547N1117 (from clone DKFZp547N1117) Length = 4857 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 169 tccacttcctcctcttccagc 189 ||||||||||||||||||||| Sbjct: 820 tccacttcctcctcttccagc 800
>emb|CR936801.1| Homo sapiens mRNA; cDNA DKFZp781E1948 (from clone DKFZp781E1948) Length = 8971 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 340 aaaacatccactgcaaatgta 360 ||||||||||||||||||||| Sbjct: 488 aaaacatccactgcaaatgta 468
>dbj|BA000037.2| Vibrio vulnificus YJ016 DNA, chromosome I, complete sequence Length = 3354505 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 687 caagccagcttctgacaatgc 707 ||||||||||||||||||||| Sbjct: 1378817 caagccagcttctgacaatgc 1378797
>ref|NM_076424.2| Caenorhabditis elegans F39C12.1 (F39C12.1) mRNA, complete cds Length = 15429 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 167 cttccacttcctcctcttcca 187 ||||||||||||||||||||| Sbjct: 4579 cttccacttcctcctcttcca 4559
>gb|BC012942.1| Homo sapiens RNA binding motif protein, X-linked-like 1, mRNA (cDNA clone MGC:9398 IMAGE:3875565), complete cds Length = 3678 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 169 tccacttcctcctcttccagc 189 ||||||||||||||||||||| Sbjct: 626 tccacttcctcctcttccagc 606
>gb|AC107068.3| Homo sapiens BAC clone RP11-121C2 from 4, complete sequence Length = 181804 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 303 tttgtgtgttatttgcaaatc 323 ||||||||||||||||||||| Sbjct: 48640 tttgtgtgttatttgcaaatc 48620
>ref|NM_153834.3| Homo sapiens G protein-coupled receptor 112 (GPR112), mRNA Length = 9931 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 340 aaaacatccactgcaaatgta 360 ||||||||||||||||||||| Sbjct: 1244 aaaacatccactgcaaatgta 1224
>gb|AY140954.1| Homo sapiens G-protein coupled receptor GPR112 (GPR112) mRNA, complete cds Length = 8400 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 340 aaaacatccactgcaaatgta 360 ||||||||||||||||||||| Sbjct: 761 aaaacatccactgcaaatgta 741
>gb|AY882585.1| Homo sapiens G protein-coupled receptor 112 (GPR112) mRNA, complete cds Length = 9931 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 340 aaaacatccactgcaaatgta 360 ||||||||||||||||||||| Sbjct: 1244 aaaacatccactgcaaatgta 1224
>gb|DQ120655.1| Cercopithecus sabaeus RBM1 gene, partial cds Length = 1155 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 169 tccacttcctcctcttccagc 189 ||||||||||||||||||||| Sbjct: 351 tccacttcctcctcttccagc 331
>gb|DQ120654.1| Hylobates lar RBM1 gene, partial cds Length = 1155 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 169 tccacttcctcctcttccagc 189 ||||||||||||||||||||| Sbjct: 351 tccacttcctcctcttccagc 331
>gb|DQ120653.1| Pongo pygmaeus RBM1 gene, partial cds Length = 1155 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 169 tccacttcctcctcttccagc 189 ||||||||||||||||||||| Sbjct: 351 tccacttcctcctcttccagc 331
>gb|DQ120652.1| Gorilla gorilla RBM1 gene, partial cds Length = 1155 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 169 tccacttcctcctcttccagc 189 ||||||||||||||||||||| Sbjct: 351 tccacttcctcctcttccagc 331
>gb|DQ120651.1| Pan troglodytes RBM1 gene, partial cds Length = 1155 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 169 tccacttcctcctcttccagc 189 ||||||||||||||||||||| Sbjct: 351 tccacttcctcctcttccagc 331
>gb|DQ120650.1| Homo sapiens RBM1 gene, partial cds Length = 1152 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 169 tccacttcctcctcttccagc 189 ||||||||||||||||||||| Sbjct: 351 tccacttcctcctcttccagc 331 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,579,285 Number of Sequences: 3902068 Number of extensions: 7579285 Number of successful extensions: 176305 Number of sequences better than 10.0: 54 Number of HSP's better than 10.0 without gapping: 54 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 175995 Number of HSP's gapped (non-prelim): 280 length of query: 764 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 741 effective length of database: 17,143,297,704 effective search space: 12703183598664 effective search space used: 12703183598664 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 21 (42.1 bits)