ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags29n21
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK062530.1| Oryza sativa (japonica cultivar-group) cDNA clon... 488 e-134
2gb|AY105849.1| Zea mays PCO098078 mRNA sequence 436 e-119
3dbj|AK062709.1| Oryza sativa (japonica cultivar-group) cDNA clon... 432 e-118
4ref|NM_192040.1| Oryza sativa (japonica cultivar-group), predic... 353 5e-94
5dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 190 4e-45
6dbj|AP003335.4| Oryza sativa (japonica cultivar-group) genomic D... 190 4e-45
7ref|XM_580814.2| PREDICTED: Bos taurus similar to developmentall... 46 0.14
8emb|CR626934.1| Triticum aestivum 44 0.57
9emb|CR626926.1| Aegilops tauschii 44 0.57
10gb|AY159805.1| Aegilops tauschii puroindoline a gene, complete cds 44 0.57
11ref|NM_106576.2| Arabidopsis thaliana unknown protein AT1G79260 ... 42 2.2
12gb|AC164111.4| Mus musculus BAC clone RP23-267E11 from chromosom... 42 2.2
13gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxyl... 42 2.2
14gb|AC137993.2| Oryza sativa (japonica cultivar-group) chromosome... 42 2.2
15gb|AC119671.4| Oryza sativa (japonica cultivar-group) chromosome... 42 2.2
16gb|AC124563.4| Mus musculus BAC clone RP23-206B15 from chromosom... 42 2.2
17emb|AL627110.21| Human DNA sequence from clone RP11-555C22 on ch... 42 2.2
18emb|AL441943.6| Human DNA sequence from clone RP11-69C17 on chro... 42 2.2
19emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome 42 2.2
20emb|BX908795.10| Zebrafish DNA sequence from clone DKEY-92J12 in... 42 2.2
21gb|AY048206.1| Arabidopsis thaliana At1g79260/YUP8H12R_40 mRNA, ... 42 2.2
22dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
23emb|BX817326.1|CNS0AB83 Arabidopsis thaliana Full-length cDNA Co... 42 2.2
24gb|BT002660.1| Arabidopsis thaliana At1g79260/YUP8H12R_40 gene, ... 42 2.2
25dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome 42 2.2
26dbj|AK111322.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.2
27gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 2.2
28gb|AC002986.1|YUP8H12R Arabidopsis thaliana chromosome 1 YAC YUP... 42 2.2
29gb|AC116825.23| Mus musculus chromosome 8, clone RP24-367H14, co... 40 8.9
30gb|AF469622.1| Mus musculus dual-specificity Rho- and Arf-GTPase... 40 8.9
31ref|NM_126013.1| Arabidopsis thaliana alpha-mannosidase AT5G6615... 40 8.9
32gb|AC116875.10| Mus musculus chromosome 8, clone RP24-426B21, co... 40 8.9
33gb|AC122484.3| Mus musculus BAC clone RP24-366J10 from chromosom... 40 8.9
34emb|CT009723.4| Mouse DNA sequence from clone RP23-12L5 on chrom... 40 8.9
35gb|AC129317.3| Mus musculus BAC clone RP23-443L14 from chromosom... 40 8.9
36gb|AC121886.2| Mus musculus BAC clone RP24-141K3 from 18, comple... 40 8.9
37ref|XM_541279.2| PREDICTED: Canis familiaris similar to transien... 40 8.9
38gb|AC131172.4| Rattus norvegicus 5 BAC CH230-12K15 (Children's H... 40 8.9
39emb|AL591416.4| Human DNA sequence from clone RP11-108N13 on chr... 40 8.9
40emb|AL121957.15|HSDJ67A8 Human DNA sequence from clone RP1-67A8 ... 40 8.9
41emb|AL035397.4|HS45P1 Human DNA sequence from clone RP6-45P1 on ... 40 8.9
42ref|NM_001031353.1| Gallus gallus similar to receptor kinase (LO... 40 8.9
43emb|BX957307.12| Zebrafish DNA sequence from clone CH211-117E20 ... 40 8.9
44emb|AJ720516.1| Gallus gallus mRNA for hypothetical protein, clo... 40 8.9
45gb|AE006464.1| Homo sapiens 16p13.3 sequence section 3 of 8 40 8.9
46gb|AY162970.1|AY162963S8 Homo sapiens uromodulin precursor (UMOD... 40 8.9
47gb|AC106796.3| Homo sapiens chromosome 16 clone RP11-429K17, com... 40 8.9
48gb|AC117376.3| Homo sapiens 12 BAC RP11-349K16 (Roswell Park Can... 40 8.9
49dbj|AB011474.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 8.9
50dbj|AP001745.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 8.9
51emb|Z97653.14|HS380A1 Human DNA sequence from clone LA16c-380A1 ... 40 8.9
52gb|U10242.1|PCU10242 Pseudomonas cepacia E37 mineral phosphate s... 40 8.9
53dbj|AP001619.1| Homo sapiens genomic DNA, chromosome 21, clone:K... 40 8.9
54emb|AL732553.11| Mouse DNA sequence from clone RP23-144L20 on ch... 40 8.9 
>dbj|AK062530.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-104-E02, full
           insert sequence
          Length = 780

 Score =  488 bits (246), Expect = e-134
 Identities = 402/454 (88%)
 Strand = Plus / Minus

                                                                       
Query: 168 tcttgagaagggctttcaaatggggctgaagactgtttgtgattgttgccatctgaacga 227
           |||| ||||||||||| | ||| ||||| |||||| |||||||||||||||||||||| |
Sbjct: 511 tcttcagaagggctttgagatgtggctgtagactggttgtgattgttgccatctgaacaa 452

                                                                       
Query: 228 tgtacgagagctccccgtccaccacctgaaaagcccttgtgatctgcttcacctttgatg 287
             || ||||||||||| || ||||  |||||||| ||||||||||| |||||||| ||||
Sbjct: 451 catatgagagctccccatctaccaattgaaaagctcttgtgatctgtttcaccttggatg 392

                                                                       
Query: 288 cattgccaataagttcgctttggagtgtcactgttttcttttcagtatcatatgagcctg 347
           | || || | ||||||||||||||| ||||||||||||||||||| |||| | || ||  
Sbjct: 391 cgttccccacaagttcgctttggagcgtcactgttttcttttcagcatcaaacgaaccct 332

                                                                       
Query: 348 tctggacctcggtgaggcctgtgctctgggcaatgaccacctcgacggagccgtcggggc 407
           |||| |||||||  || || |||||||| |  ||||| ||||||||||||||||||||||
Sbjct: 331 tctgaacctcggccagaccagtgctctgcgagatgacaacctcgacggagccgtcggggc 272

                                                                       
Query: 408 ggggccgccagtacccactctcggcgtgcatcgggtcgccggacgccgtcttccacgtcc 467
           |||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||||||
Sbjct: 271 ggggccgccagtacccactctcggcgtgcatcggctcgcctgacgccgccttccacgtcc 212

                                                                       
Query: 468 tctgcgtgtacgagatcaccggcttggaagggtggtgggagaagaggatctcctcgccgt 527
           |||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||
Sbjct: 211 tctgcgtgtacgagatcaccggcttggaggggtggtgggagaagaggagctcctcgccgt 152

                                                                       
Query: 528 agcggaacggggcgatggtggggaaggtcccctcgccctccccgcgccacttgcccagca 587
           ||||||| |||| ||||||||||||| |||||||||| |||||||||||||| |||||||
Sbjct: 151 agcggaagggggagatggtggggaagctcccctcgccttccccgcgccacttccccagca 92

                                             
Query: 588 ggaacgacagcggagccaccagtgggtgcggcgc 621
           |||||| |||||| ||||||   |||||||||||
Sbjct: 91  ggaacgccagcggcgccaccgccgggtgcggcgc 58
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>gb|AY105849.1| Zea mays PCO098078 mRNA sequence
          Length = 657

 Score =  436 bits (220), Expect = e-119
 Identities = 358/404 (88%)
 Strand = Plus / Minus

                                                                       
Query: 204 ttgtgattgttgccatctgaacgatgtacgagagctccccgtccaccacctgaaaagccc 263
           ||||||| |||||||||||||||| ||||||||||||||| ||  ||||||||||||  |
Sbjct: 537 ttgtgatcgttgccatctgaacgacgtacgagagctccccatctgccacctgaaaagttc 478

                                                                       
Query: 264 ttgtgatctgcttcacctttgatgcattgccaataagttcgctttggagtgtcactgttt 323
           | |||||||||||||||||||||||||| || |  |||||||||||||||||||||||||
Sbjct: 477 tcgtgatctgcttcacctttgatgcattccctacgagttcgctttggagtgtcactgttt 418

                                                                       
Query: 324 tcttttcagtatcatatgagcctgtctggacctcggtgaggcctgtgctctgggcaatga 383
           ||||||||| |||| |||| ||  |||||||||||| |||||| |||||||| || ||||
Sbjct: 417 tcttttcagcatcaaatgaacccttctggacctcggcgaggccagtgctctgagcgatga 358

                                                                       
Query: 384 ccacctcgacggagccgtcggggcggggccgccagtacccactctcggcgtgcatcgggt 443
           |||| |||||||||||||| |||||||||||||||||||| ||||||||||||||||| |
Sbjct: 357 ccacgtcgacggagccgtcagggcggggccgccagtacccgctctcggcgtgcatcggct 298

                                                                       
Query: 444 cgccggacgccgtcttccacgtcctctgcgtgtacgagatcaccggcttggaagggtggt 503
           |||| |||||||||||||||||| ||||||||||||||||||| |||||||| || || |
Sbjct: 297 cgccagacgccgtcttccacgtcttctgcgtgtacgagatcactggcttggagggatgat 238

                                                                       
Query: 504 gggagaagaggatctcctcgccgtagcggaacggggcgatggtggggaaggtcccctcgc 563
           | |||||||||| |||||||||||| ||||| | ||  |||||||||||| | |||||||
Sbjct: 237 gcgagaagaggagctcctcgccgtaccggaaggaggatatggtggggaagctgccctcgc 178

                                                       
Query: 564 cctccccgcgccacttgcccagcaggaacgacagcggagccacc 607
           | |||||||||||||| ||||| ||||| | |||||| ||||||
Sbjct: 177 cttccccgcgccacttccccagtaggaaggccagcggcgccacc 134
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>dbj|AK062709.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-106-B12, full
           insert sequence
          Length = 742

 Score =  432 bits (218), Expect = e-118
 Identities = 394/454 (86%), Gaps = 9/454 (1%)
 Strand = Plus / Minus

                                                                       
Query: 168 tcttgagaagggctttcaaatggggctgaagactgtttgtgattgttgccatctgaacga 227
           |||| ||||||||||| | ||| ||||| |||||| |||||||||||||||||||||| |
Sbjct: 531 tcttcagaagggctttgagatgtggctgtagactggttgtgattgttgccatctgaacaa 472

                                                                       
Query: 228 tgtacgagagctccccgtccaccacctgaaaagcccttgtgatctgcttcacctttgatg 287
             || ||||||||||| || ||||  |||||||| ||||||||         ||| ||||
Sbjct: 471 catatgagagctccccatctaccaattgaaaagctcttgtgat---------cttggatg 421

                                                                       
Query: 288 cattgccaataagttcgctttggagtgtcactgttttcttttcagtatcatatgagcctg 347
           | || || | ||||||||||||||| ||||||||||||||||||| |||| | || ||  
Sbjct: 420 cgttccccacaagttcgctttggagcgtcactgttttcttttcagcatcaaacgaaccct 361

                                                                       
Query: 348 tctggacctcggtgaggcctgtgctctgggcaatgaccacctcgacggagccgtcggggc 407
           |||| |||||||  || || |||||||| |  ||||| ||||||||||||||||||||||
Sbjct: 360 tctgaacctcggccagaccagtgctctgcgagatgacaacctcgacggagccgtcggggc 301

                                                                       
Query: 408 ggggccgccagtacccactctcggcgtgcatcgggtcgccggacgccgtcttccacgtcc 467
           |||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||||||
Sbjct: 300 ggggccgccagtacccactctcggcgtgcatcggctcgcctgacgccgccttccacgtcc 241

                                                                       
Query: 468 tctgcgtgtacgagatcaccggcttggaagggtggtgggagaagaggatctcctcgccgt 527
           |||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||
Sbjct: 240 tctgcgtgtacgagatcaccggcttggaggggtggtgggagaagaggagctcctcgccgt 181

                                                                       
Query: 528 agcggaacggggcgatggtggggaaggtcccctcgccctccccgcgccacttgcccagca 587
           ||||||| |||| ||||||||||||| |||||||||| |||||||||||||| |||||||
Sbjct: 180 agcggaagggggagatggtggggaagctcccctcgccttccccgcgccacttccccagca 121

                                             
Query: 588 ggaacgacagcggagccaccagtgggtgcggcgc 621
           |||||| |||||| ||||||   |||||||||||
Sbjct: 120 ggaacgccagcggcgccaccgccgggtgcggcgc 87
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>ref|NM_192040.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 579

 Score =  353 bits (178), Expect = 5e-94
 Identities = 226/242 (93%)
 Strand = Plus / Minus

                                                                       
Query: 380 atgaccacctcgacggagccgtcggggcggggccgccagtacccactctcggcgtgcatc 439
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 atgacaacctcgacggagccgtcggggcggggccgccagtacccactctcggcgtgcatc 213

                                                                       
Query: 440 gggtcgccggacgccgtcttccacgtcctctgcgtgtacgagatcaccggcttggaaggg 499
           || ||||| ||||||| ||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 212 ggctcgcctgacgccgccttccacgtcctctgcgtgtacgagatcaccggcttggagggg 153

                                                                       
Query: 500 tggtgggagaagaggatctcctcgccgtagcggaacggggcgatggtggggaaggtcccc 559
           |||||||||||||||| |||||||||||||||||| |||| ||||||||||||| |||||
Sbjct: 152 tggtgggagaagaggagctcctcgccgtagcggaagggggagatggtggggaagctcccc 93

                                                                       
Query: 560 tcgccctccccgcgccacttgcccagcaggaacgacagcggagccaccagtgggtgcggc 619
           ||||| |||||||||||||| ||||||||||||| |||||| ||||||   |||||||||
Sbjct: 92  tcgccttccccgcgccacttccccagcaggaacgccagcggcgccaccgccgggtgcggc 33

             
Query: 620 gc 621
           ||
Sbjct: 32  gc 31
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  190 bits (96), Expect = 4e-45
 Identities = 108/112 (96%)
 Strand = Plus / Minus

                                                                            
Query: 380      atgaccacctcgacggagccgtcggggcggggccgccagtacccactctcggcgtgcatc 439
                ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27955405 atgacaacctcgacggagccgtcggggcggggccgccagtacccactctcggcgtgcatc 27955346

                                                                    
Query: 440      gggtcgccggacgccgtcttccacgtcctctgcgtgtacgagatcaccggct 491
                || ||||| ||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 27955345 ggctcgcctgacgccgccttccacgtcctctgcgtgtacgagatcaccggct 27955294



 Score =  167 bits (84), Expect = 6e-38
 Identities = 120/132 (90%)
 Strand = Plus / Minus

                                                                            
Query: 490      cttggaagggtggtgggagaagaggatctcctcgccgtagcggaacggggcgatggtggg 549
                |||||| ||||||||||||||||||| |||||||||||||||||| |||| |||||||||
Sbjct: 27955214 cttggaggggtggtgggagaagaggagctcctcgccgtagcggaagggggagatggtggg 27955155

                                                                            
Query: 550      gaaggtcccctcgccctccccgcgccacttgcccagcaggaacgacagcggagccaccag 609
                |||| |||||||||| |||||||||||||| ||||||||||||| |||||| ||||||  
Sbjct: 27955154 gaagctcccctcgccttccccgcgccacttccccagcaggaacgccagcggcgccaccgc 27955095

                            
Query: 610      tgggtgcggcgc 621
                 |||||||||||
Sbjct: 27955094 cgggtgcggcgc 27955083



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 98/114 (85%)
 Strand = Plus / Minus

                                                                            
Query: 168      tcttgagaagggctttcaaatggggctgaagactgtttgtgattgttgccatctgaacga 227
                |||| ||||||||||| | ||| ||||| |||||| |||||||||||||||||||||| |
Sbjct: 27958425 tcttcagaagggctttgagatgtggctgtagactggttgtgattgttgccatctgaacaa 27958366

                                                                      
Query: 228      tgtacgagagctccccgtccaccacctgaaaagcccttgtgatctgcttcacct 281
                  || ||||||||||| || ||||  |||||||| ||||||||||| |||||||
Sbjct: 27958365 catatgagagctccccatctaccaattgaaaagctcttgtgatctgtttcacct 27958312



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                        
Query: 298      aagttcgctttggagtgtcactgttttcttttcagtatca 337
                ||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 27957972 aagttcgctttggagcgtcactgttttcttttcagcatca 27957933
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>dbj|AP003335.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1144G04
          Length = 194459

 Score =  190 bits (96), Expect = 4e-45
 Identities = 108/112 (96%)
 Strand = Plus / Minus

                                                                          
Query: 380    atgaccacctcgacggagccgtcggggcggggccgccagtacccactctcggcgtgcatc 439
              ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142086 atgacaacctcgacggagccgtcggggcggggccgccagtacccactctcggcgtgcatc 142027

                                                                  
Query: 440    gggtcgccggacgccgtcttccacgtcctctgcgtgtacgagatcaccggct 491
              || ||||| ||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 142026 ggctcgcctgacgccgccttccacgtcctctgcgtgtacgagatcaccggct 141975



 Score =  167 bits (84), Expect = 6e-38
 Identities = 120/132 (90%)
 Strand = Plus / Minus

                                                                          
Query: 490    cttggaagggtggtgggagaagaggatctcctcgccgtagcggaacggggcgatggtggg 549
              |||||| ||||||||||||||||||| |||||||||||||||||| |||| |||||||||
Sbjct: 141895 cttggaggggtggtgggagaagaggagctcctcgccgtagcggaagggggagatggtggg 141836

                                                                          
Query: 550    gaaggtcccctcgccctccccgcgccacttgcccagcaggaacgacagcggagccaccag 609
              |||| |||||||||| |||||||||||||| ||||||||||||| |||||| ||||||  
Sbjct: 141835 gaagctcccctcgccttccccgcgccacttccccagcaggaacgccagcggcgccaccgc 141776

                          
Query: 610    tgggtgcggcgc 621
               |||||||||||
Sbjct: 141775 cgggtgcggcgc 141764



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 98/114 (85%)
 Strand = Plus / Minus

                                                                          
Query: 168    tcttgagaagggctttcaaatggggctgaagactgtttgtgattgttgccatctgaacga 227
              |||| ||||||||||| | ||| ||||| |||||| |||||||||||||||||||||| |
Sbjct: 145106 tcttcagaagggctttgagatgtggctgtagactggttgtgattgttgccatctgaacaa 145047

                                                                    
Query: 228    tgtacgagagctccccgtccaccacctgaaaagcccttgtgatctgcttcacct 281
                || ||||||||||| || ||||  |||||||| ||||||||||| |||||||
Sbjct: 145046 catatgagagctccccatctaccaattgaaaagctcttgtgatctgtttcacct 144993



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                      
Query: 298    aagttcgctttggagtgtcactgttttcttttcagtatca 337
              ||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 144653 aagttcgctttggagcgtcactgttttcttttcagcatca 144614
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>ref|XM_580814.2| PREDICTED: Bos taurus similar to developmentally regulated protein
            TPO1 (LOC504658), partial mRNA
          Length = 1579

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 147  ccaaggagattgctcagatcctc 169
            |||||||||||||||||||||||
Sbjct: 1374 ccaaggagattgctcagatcctc 1352
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>emb|CR626934.1| Triticum aestivum
          Length = 94398

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                               
Query: 77    caaaaacgtcttgtatttcggtaccgagggagta 110
             |||||||||||| ||||||||||| |||| ||||
Sbjct: 26078 caaaaacgtcttatatttcggtacagaggtagta 26045
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>emb|CR626926.1| Aegilops tauschii
          Length = 94421

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                               
Query: 77    caaaaacgtcttgtatttcggtaccgagggagta 110
             |||||||||||| ||||||||||| |||| ||||
Sbjct: 24173 caaaaacgtcttatatttcggtacagaggtagta 24140
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>gb|AY159805.1| Aegilops tauschii puroindoline a gene, complete cds
          Length = 3573

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 77   caaaaacgtcttgtatttcggtaccgagggagta 110
            |||||||||||| ||||||||||| |||| ||||
Sbjct: 2446 caaaaacgtcttatatttcggtacagaggtagta 2413
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>ref|NM_106576.2| Arabidopsis thaliana unknown protein AT1G79260 mRNA, complete cds
          Length = 765

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 417 agtacccactctcggcgtgcatcgg 441
           |||| ||||||||||||||||||||
Sbjct: 265 agtaaccactctcggcgtgcatcgg 241
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>gb|AC164111.4| Mus musculus BAC clone RP23-267E11 from chromosome 6, complete sequence
          Length = 179265

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 109    tagaacttagatacagtatgttgca 133
              ||||||||| |||||||||||||||
Sbjct: 103521 tagaacttatatacagtatgttgca 103545
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>gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxylase, ZCCT2, ZCCT1, and
             SNF2P genes, complete cds; nucellin pseudogene, complete
             sequence; putative transposase, phosphatidylinositol
             phosphatidylcholine transfer protein sec14 cytosolic-like
             protein, and phytochrome P450-like protein genes, complete
             cds; and unknown genes
          Length = 438828

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 70    tgaacagcaaaaacgtcttgtattt 94
             ||||| |||||||||||||||||||
Sbjct: 14428 tgaactgcaaaaacgtcttgtattt 14452
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>gb|AC137993.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
           OSJNBb0122P24, complete sequence
          Length = 136104

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 385 cacctcgacggagccgtcggggcgg 409
           |||||||| ||||||||||||||||
Sbjct: 378 cacctcgaaggagccgtcggggcgg 354
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>gb|AC119671.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0084F23, complete sequence
          Length = 89829

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 385   cacctcgacggagccgtcggggcgg 409
             |||||||| ||||||||||||||||
Sbjct: 86421 cacctcgaaggagccgtcggggcgg 86397
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>gb|AC124563.4| Mus musculus BAC clone RP23-206B15 from chromosome 6, complete sequence
          Length = 210092

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 109   tagaacttagatacagtatgttgca 133
             ||||||||| |||||||||||||||
Sbjct: 21475 tagaacttatatacagtatgttgca 21499
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>emb|AL627110.21| Human DNA sequence from clone RP11-555C22 on chromosome 1 Contains part
             of a novel gene, complete sequence
          Length = 39004

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 30    taaattttaggtttcccaaat 50
             |||||||||||||||||||||
Sbjct: 29503 taaattttaggtttcccaaat 29483
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>emb|AL441943.6| Human DNA sequence from clone RP11-69C17 on chromosome 10 Contains four
             novel genes (FLJ40155) (FLJ31539), complete sequence
          Length = 203234

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 18    ttccttattagctaaatttta 38
             |||||||||||||||||||||
Sbjct: 19493 ttccttattagctaaatttta 19513
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>emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome
          Length = 5205140

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 319     tgttttcttttcagtatcata 339
               |||||||||||||||||||||
Sbjct: 1066498 tgttttcttttcagtatcata 1066518
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>emb|BX908795.10| Zebrafish DNA sequence from clone DKEY-92J12 in linkage group 1,
             complete sequence
          Length = 142468

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 29    ctaaattttaggtttcccaaa 49
             |||||||||||||||||||||
Sbjct: 72411 ctaaattttaggtttcccaaa 72431
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>gb|AY048206.1| Arabidopsis thaliana At1g79260/YUP8H12R_40 mRNA, complete cds
          Length = 748

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 417 agtacccactctcggcgtgcatcgg 441
           |||| ||||||||||||||||||||
Sbjct: 248 agtaaccactctcggcgtgcatcgg 224
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 385     cacctcgacggagccgtcggggcgg 409
               |||||||| ||||||||||||||||
Sbjct: 7470420 cacctcgaaggagccgtcggggcgg 7470444
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>emb|BX817326.1|CNS0AB83 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL15ZE10 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 714

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 417 agtacccactctcggcgtgcatcgg 441
           |||| ||||||||||||||||||||
Sbjct: 265 agtaaccactctcggcgtgcatcgg 241
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>gb|BT002660.1| Arabidopsis thaliana At1g79260/YUP8H12R_40 gene, complete cds
          Length = 501

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 417 agtacccactctcggcgtgcatcgg 441
           |||| ||||||||||||||||||||
Sbjct: 244 agtaaccactctcggcgtgcatcgg 220
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>dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome
          Length = 5277274

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 319     tgttttcttttcagtatcata 339
               |||||||||||||||||||||
Sbjct: 1127271 tgttttcttttcagtatcata 1127291
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>dbj|AK111322.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-181-D06, full
           insert sequence
          Length = 692

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 385 cacctcgacggagccgtcggggcgg 409
           |||||||| ||||||||||||||||
Sbjct: 234 cacctcgaaggagccgtcggggcgg 210
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 385     cacctcgacggagccgtcggggcgg 409
               |||||||| ||||||||||||||||
Sbjct: 7540506 cacctcgaaggagccgtcggggcgg 7540530
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>gb|AC002986.1|YUP8H12R Arabidopsis thaliana chromosome 1 YAC YUP8H12R sequence, complete
             sequence
          Length = 181925

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 417   agtacccactctcggcgtgcatcgg 441
             |||| ||||||||||||||||||||
Sbjct: 46000 agtaaccactctcggcgtgcatcgg 46024
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>gb|AC116825.23| Mus musculus chromosome 8, clone RP24-367H14, complete sequence
          Length = 182808

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 33   attttaggtttcccaaataa 52
            ||||||||||||||||||||
Sbjct: 9578 attttaggtttcccaaataa 9559
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>gb|AF469622.1| Mus musculus dual-specificity Rho- and Arf-GTPase activating
           protein 1 (Drag1) mRNA, partial cds, alternatively
           spliced
          Length = 5373

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 395 gagccgtcggggcggggccg 414
           ||||||||||||||||||||
Sbjct: 93  gagccgtcggggcggggccg 112
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>ref|NM_126013.1| Arabidopsis thaliana alpha-mannosidase AT5G66150 mRNA, complete cds
          Length = 3144

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 193  ctgaagactgtttgtgattgttgc 216
            ||||||| ||||||||||||||||
Sbjct: 1795 ctgaagagtgtttgtgattgttgc 1772
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>gb|AC116875.10| Mus musculus chromosome 8, clone RP24-426B21, complete sequence
          Length = 188938

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 33   attttaggtttcccaaataa 52
            ||||||||||||||||||||
Sbjct: 5693 attttaggtttcccaaataa 5712
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>gb|AC122484.3| Mus musculus BAC clone RP24-366J10 from chromosome 13, complete
             sequence
          Length = 182757

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 556   cccctcgccctccccgcgcc 575
             ||||||||||||||||||||
Sbjct: 66260 cccctcgccctccccgcgcc 66241
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>emb|CT009723.4| Mouse DNA sequence from clone RP23-12L5 on chromosome 9, complete
              sequence
          Length = 210030

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 365    cctgtgctctgggcaatgac 384
              ||||||||||||||||||||
Sbjct: 166030 cctgtgctctgggcaatgac 166011
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>gb|AC129317.3| Mus musculus BAC clone RP23-443L14 from chromosome 9, complete sequence
          Length = 210950

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 365   cctgtgctctgggcaatgac 384
             ||||||||||||||||||||
Sbjct: 66716 cctgtgctctgggcaatgac 66735
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>gb|AC121886.2| Mus musculus BAC clone RP24-141K3 from 18, complete sequence
          Length = 140819

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 395   gagccgtcggggcggggccg 414
             ||||||||||||||||||||
Sbjct: 43533 gagccgtcggggcggggccg 43514
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>ref|XM_541279.2| PREDICTED: Canis familiaris similar to transient receptor potential
            cation channel, subfamily M, member 6 (LOC484163), mRNA
          Length = 6096

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 156  ttgctcagatcctcttgaga 175
            ||||||||||||||||||||
Sbjct: 5036 ttgctcagatcctcttgaga 5017
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>gb|AC131172.4| Rattus norvegicus 5 BAC CH230-12K15 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 230561

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 309    ggagtgtcactgttttcttt 328
              ||||||||||||||||||||
Sbjct: 141572 ggagtgtcactgttttcttt 141553
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>emb|AL591416.4| Human DNA sequence from clone RP11-108N13 on chromosome 6 Contains a
             ribosomal protein L6 (RPL6) pseudogene and the 5' end of a
             novel gene, complete sequence
          Length = 157068

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 312   gtgtcactgttttcttttca 331
             ||||||||||||||||||||
Sbjct: 66740 gtgtcactgttttcttttca 66721
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>emb|AL121957.15|HSDJ67A8 Human DNA sequence from clone RP1-67A8 on chromosome 6q16.2-21 Contains
             the 5' end of a novel gene, a novel gene, the 5' end of
             the C6orf210 gene for chromosome 6 open reading frame 210
             and two CpG islands, complete sequence
          Length = 154918

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 491   ttggaagggtggtgggagaagagg 514
             |||||||||||||||| |||||||
Sbjct: 57127 ttggaagggtggtgggggaagagg 57150
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>emb|AL035397.4|HS45P1 Human DNA sequence from clone RP6-45P1 on chromosome 22q11.22-12.3,
             complete sequence
          Length = 77601

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 315   tcactgttttcttttcagta 334
             ||||||||||||||||||||
Sbjct: 47988 tcactgttttcttttcagta 47969
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>ref|NM_001031353.1| Gallus gallus similar to receptor kinase (LOC426000), mRNA
          Length = 2853

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 559  ctcgccctccccgcgccact 578
            ||||||||||||||||||||
Sbjct: 1813 ctcgccctccccgcgccact 1794
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>emb|BX957307.12| Zebrafish DNA sequence from clone CH211-117E20 in linkage group 6,
             complete sequence
          Length = 171645

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 313   tgtcactgttttcttttcag 332
             ||||||||||||||||||||
Sbjct: 87321 tgtcactgttttcttttcag 87340
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>emb|AJ720516.1| Gallus gallus mRNA for hypothetical protein, clone 19g20
          Length = 2853

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 559  ctcgccctccccgcgccact 578
            ||||||||||||||||||||
Sbjct: 1813 ctcgccctccccgcgccact 1794
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>gb|AE006464.1| Homo sapiens 16p13.3 sequence section 3 of 8
          Length = 256073

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 555    tcccctcgccctccccgcgc 574
              ||||||||||||||||||||
Sbjct: 178036 tcccctcgccctccccgcgc 178055
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>gb|AY162970.1|AY162963S8 Homo sapiens uromodulin precursor (UMOD) gene, exon 12 and complete
           cds
          Length = 733

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 313 tgtcactgttttcttttcag 332
           ||||||||||||||||||||
Sbjct: 234 tgtcactgttttcttttcag 253
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>gb|AC106796.3| Homo sapiens chromosome 16 clone RP11-429K17, complete sequence
          Length = 168892

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 313    tgtcactgttttcttttcag 332
              ||||||||||||||||||||
Sbjct: 100917 tgtcactgttttcttttcag 100898
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>gb|AC117376.3| Homo sapiens 12 BAC RP11-349K16 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 177041

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 314   gtcactgttttcttttcagt 333
             ||||||||||||||||||||
Sbjct: 10189 gtcactgttttcttttcagt 10170
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>dbj|AB011474.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K2A18
          Length = 79899

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 193   ctgaagactgtttgtgattgttgc 216
             ||||||| ||||||||||||||||
Sbjct: 57852 ctgaagagtgtttgtgattgttgc 57875
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>dbj|AP001745.1| Homo sapiens genomic DNA, chromosome 21q, section 89/105
          Length = 336578

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 356   tcggtgaggcctgtgctctgggca 379
             |||| |||||||||||||||||||
Sbjct: 28037 tcggagaggcctgtgctctgggca 28014



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 356   tcggtgaggcctgtgctctgggca 379
             |||| |||||||||||||||||||
Sbjct: 27996 tcggagaggcctgtgctctgggca 27973



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 356   tcggtgaggcctgtgctctgggca 379
             |||| |||||||||||||||||||
Sbjct: 27873 tcggagaggcctgtgctctgggca 27850
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>emb|Z97653.14|HS380A1 Human DNA sequence from clone LA16c-380A1 on chromosome 16, complete
             sequence
          Length = 25042

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 555   tcccctcgccctccccgcgc 574
             ||||||||||||||||||||
Sbjct: 12411 tcccctcgccctccccgcgc 12430
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>gb|U10242.1|PCU10242 Pseudomonas cepacia E37 mineral phosphate solubilizing (gabY) gene,
           complete cds
          Length = 691

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 580 gcccagcaggaacgacagcg 599
           ||||||||||||||||||||
Sbjct: 66  gcccagcaggaacgacagcg 47
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>dbj|AP001619.1| Homo sapiens genomic DNA, chromosome 21, clone:KB1016E7, MX1-D21S171
            region, complete sequence
          Length = 161226

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 356  tcggtgaggcctgtgctctgggca 379
            |||| |||||||||||||||||||
Sbjct: 3110 tcggagaggcctgtgctctgggca 3087



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 356  tcggtgaggcctgtgctctgggca 379
            |||| |||||||||||||||||||
Sbjct: 3069 tcggagaggcctgtgctctgggca 3046



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 356  tcggtgaggcctgtgctctgggca 379
            |||| |||||||||||||||||||
Sbjct: 2946 tcggagaggcctgtgctctgggca 2923
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>emb|AL732553.11| Mouse DNA sequence from clone RP23-144L20 on chromosome 4, complete
             sequence
          Length = 33734

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 172   gagaagggctttcaaatggg 191
             ||||||||||||||||||||
Sbjct: 16037 gagaagggctttcaaatggg 16056


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,742,159
Number of Sequences: 3902068
Number of extensions: 4742159
Number of successful extensions: 90484
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 90202
Number of HSP's gapped (non-prelim): 282
length of query: 651
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 628
effective length of database: 17,143,297,704
effective search space: 10765990958112
effective search space used: 10765990958112
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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