ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags29n17 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_190270.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 906 Score = 313 bits (158), Expect = 4e-82 Identities = 362/430 (84%) Strand = Plus / Minus Query: 176 tcctcgtcatcgtcggcggcaccagcagagttgttgagggcgttgagcctctcgacgagg 235 ||||||||||| || | |||||||||||| |||||| || || | || ||||| || Sbjct: 890 tcctcgtcatcatcatcagcaccagcagaggagttgagagcattcaatctttcgacaaga 831 Query: 236 ctggccttcctctcctcgtaggtgagcttcttggggttgtacctcttgtgagtcttggga 295 ||||||||||||| |||||||| ||||||||| ||||||| |||||||| ||| || Sbjct: 830 ctggccttcctctgttcgtaggttagcttcttgaggttgtatctcttgtgggtcgccggt 771 Query: 296 gctggcttggttgatttggccatgctaggatcagcgcggatggcagcgtgaaccttcttg 355 | ||||||||||||||||||| |||||||||| ||||||||||| || ||||||||| Sbjct: 770 tccttcttggttgatttggccatggtaggatcagcacggatggcagcatggaccttcttg 711 Query: 356 taaactgcttccatgtcatcagctgagattcccttcttgatgtactcactgaagtgagtt 415 || | |||||||||| ||||||| ||||||||||||| ||||||||||||||| | | Sbjct: 710 tacagtgcttccatgccatcagcatcaattcccttcttgaggtactcactgaagtgggct 651 Query: 416 tggtacttctcgggttcctcatctgctagcgacctcatgtagtcagcaacatgccctcca 475 ||| | ||||| |||||||| || || | ||||||||||||||||| || ||||| || Sbjct: 650 tggaatttctcaggttcctcctccgccatagacctcatgtagtcagccacgtgcccaccg 591 Query: 476 tagatgtacttgcggtgaatctcagcatccagagacttctcgtccttcttgaaaccagca 535 |||||||||||||||||||| |||| ||| || |||||||||||||||||| |||||| Sbjct: 590 tagatgtacttgcggtgaatatcagaatcaagctgcttctcgtccttcttgaacccagca 531 Query: 536 aatctcttgtcactgtggggaatgtccagaccaccgtccaaagctcccttaagtgcacca 595 || |||||||||||||| |||||||| |||||||| |||||||||||||| || |||||| Sbjct: 530 aacctcttgtcactgtgaggaatgtcaagaccaccatccaaagctcccttgagggcacca 471 Query: 596 aacacacggt 605 || ||||||| Sbjct: 470 aagacacggt 461
>dbj|AK104693.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-H05, full insert sequence Length = 1219 Score = 313 bits (158), Expect = 4e-82 Identities = 362/430 (84%) Strand = Plus / Minus Query: 176 tcctcgtcatcgtcggcggcaccagcagagttgttgagggcgttgagcctctcgacgagg 235 ||||||||||| || | |||||||||||| |||||| || || | || ||||| || Sbjct: 986 tcctcgtcatcatcatcagcaccagcagaggagttgagagcattcaatctttcgacaaga 927 Query: 236 ctggccttcctctcctcgtaggtgagcttcttggggttgtacctcttgtgagtcttggga 295 ||||||||||||| |||||||| ||||||||| ||||||| |||||||| ||| || Sbjct: 926 ctggccttcctctgttcgtaggttagcttcttgaggttgtatctcttgtgggtcgccggt 867 Query: 296 gctggcttggttgatttggccatgctaggatcagcgcggatggcagcgtgaaccttcttg 355 | ||||||||||||||||||| |||||||||| ||||||||||| || ||||||||| Sbjct: 866 tccttcttggttgatttggccatggtaggatcagcacggatggcagcatggaccttcttg 807 Query: 356 taaactgcttccatgtcatcagctgagattcccttcttgatgtactcactgaagtgagtt 415 || | |||||||||| ||||||| ||||||||||||| ||||||||||||||| | | Sbjct: 806 tacagtgcttccatgccatcagcatcaattcccttcttgaggtactcactgaagtgggct 747 Query: 416 tggtacttctcgggttcctcatctgctagcgacctcatgtagtcagcaacatgccctcca 475 ||| | ||||| |||||||| || || | ||||||||||||||||| || ||||| || Sbjct: 746 tggaatttctcaggttcctcctccgccatagacctcatgtagtcagccacgtgcccaccg 687 Query: 476 tagatgtacttgcggtgaatctcagcatccagagacttctcgtccttcttgaaaccagca 535 |||||||||||||||||||| |||| ||| || |||||||||||||||||| |||||| Sbjct: 686 tagatgtacttgcggtgaatatcagaatcaagctgcttctcgtccttcttgaacccagca 627 Query: 536 aatctcttgtcactgtggggaatgtccagaccaccgtccaaagctcccttaagtgcacca 595 || |||||||||||||| |||||||| |||||||| |||||||||||||| || |||||| Sbjct: 626 aacctcttgtcactgtgaggaatgtcaagaccaccatccaaagctcccttgagggcacca 567 Query: 596 aacacacggt 605 || ||||||| Sbjct: 566 aagacacggt 557
>emb|X64622.1|OS5SRRNMR O.sativa Rrl5 mRNA for 5S ribosomal RNA Length = 1114 Score = 299 bits (151), Expect = 6e-78 Identities = 362/431 (83%), Gaps = 1/431 (0%) Strand = Plus / Minus Query: 176 tcctcgtcatcgtcggcggcaccagcagagttgttgagggcgttgagcctctcgacgagg 235 ||||||||||| || | |||||||||||| |||||| || || | || ||||| || Sbjct: 900 tcctcgtcatcatcatcagcaccagcagaggagttgagagcattcaatctttcgacaaga 841 Query: 236 ctggccttcctctcctcgtaggtgagcttcttggggttgtacctcttgtgagtcttggga 295 ||||||||||||| |||||||| ||||||||| ||||||| |||||||| ||| || Sbjct: 840 ctggccttcctctgttcgtaggttagcttcttgaggttgtatctcttgtgggtcgccggt 781 Query: 296 gctggcttggttgatttggccatgctagg-atcagcgcggatggcagcgtgaaccttctt 354 | ||||||||||||||||||| |||| |||||| ||||||||||| || |||||||| Sbjct: 780 tccttcttggttgatttggccatggtagggatcagcacggatggcagcatggaccttctt 721 Query: 355 gtaaactgcttccatgtcatcagctgagattcccttcttgatgtactcactgaagtgagt 414 ||| | |||||||||| ||||||| ||||||||||||| ||||||||||||||| | Sbjct: 720 gtacagtgcttccatgccatcagcatcaattcccttcttgaggtactcactgaagtgggc 661 Query: 415 ttggtacttctcgggttcctcatctgctagcgacctcatgtagtcagcaacatgccctcc 474 |||| | ||||| |||||||| || || | ||||||||||||||||| || ||||| || Sbjct: 660 ttggaatttctcaggttcctcctccgccatagacctcatgtagtcagccacgtgcccacc 601 Query: 475 atagatgtacttgcggtgaatctcagcatccagagacttctcgtccttcttgaaaccagc 534 |||||||||||||||||||| |||| ||| || |||||||||||||||||| ||||| Sbjct: 600 gtagatgtacttgcggtgaatatcagaatcaagctgcttctcgtccttcttgaacccagc 541 Query: 535 aaatctcttgtcactgtggggaatgtccagaccaccgtccaaagctcccttaagtgcacc 594 ||| |||||||||||||| |||||||| |||||||| |||||||||||||| || ||||| Sbjct: 540 aaacctcttgtcactgtgaggaatgtcaagaccaccatccaaagctcccttgagggcacc 481 Query: 595 aaacacacggt 605 ||| ||||||| Sbjct: 480 aaagacacggt 470
>dbj|AK065268.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002K21, full insert sequence Length = 1219 Score = 297 bits (150), Expect = 2e-77 Identities = 361/430 (83%), Gaps = 1/430 (0%) Strand = Plus / Minus Query: 176 tcctcgtcatcgtcggcggcaccagcagagttgttgagggcgttgagcctctcgacgagg 235 ||||||||||| || | |||||||||||| |||||| || || | || ||||| || Sbjct: 986 tcctcgtcatcatcatcagcaccagcagaggagttgagagcattcaatctttcgac-aga 928 Query: 236 ctggccttcctctcctcgtaggtgagcttcttggggttgtacctcttgtgagtcttggga 295 ||||||||||||| |||||||| ||||||||| ||||||| |||||||| ||| || Sbjct: 927 ctggccttcctctgttcgtaggttagcttcttgaggttgtatctcttgtgggtcgccggt 868 Query: 296 gctggcttggttgatttggccatgctaggatcagcgcggatggcagcgtgaaccttcttg 355 | ||||||||||||||||||| |||||||||| ||||||||||| || ||||||||| Sbjct: 867 tccttcttggttgatttggccatggtaggatcagcacggatggcagcatggaccttcttg 808 Query: 356 taaactgcttccatgtcatcagctgagattcccttcttgatgtactcactgaagtgagtt 415 || | |||||||||| ||||||| ||||||||||||| ||||||||||||||| | | Sbjct: 807 tacagtgcttccatgccatcagcatcaattcccttcttgaggtactcactgaagtgggct 748 Query: 416 tggtacttctcgggttcctcatctgctagcgacctcatgtagtcagcaacatgccctcca 475 ||| | ||||| |||||||| || || | ||||||||||||||||| || ||||| || Sbjct: 747 tggaatttctcaggttcctcctccgccatagacctcatgtagtcagccacgtgcccaccg 688 Query: 476 tagatgtacttgcggtgaatctcagcatccagagacttctcgtccttcttgaaaccagca 535 |||||||||||||||||||| ||| ||| || |||||||||||||||||| |||||| Sbjct: 687 tagatgtacttgcggtgaataccagaatcaagctgcttctcgtccttcttgaacccagca 628 Query: 536 aatctcttgtcactgtggggaatgtccagaccaccgtccaaagctcccttaagtgcacca 595 || |||||||||||||| |||||||| |||||||| |||||||||||||| || |||||| Sbjct: 627 aacctcttgtcactgtgaggaatgtcaagaccaccatccaaagctcccttgagggcacca 568 Query: 596 aacacacggt 605 || ||||||| Sbjct: 567 aagacacggt 558
>ref|NM_190269.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 915 Score = 291 bits (147), Expect = 1e-75 Identities = 321/379 (84%) Strand = Plus / Minus Query: 227 tcgacgaggctggccttcctctcctcgtaggtgagcttcttggggttgtacctcttgtga 286 |||||||| ||||||||||||| ||||||||| ||||||||| ||||||| |||||||| Sbjct: 848 tcgacgagactggccttcctctgctcgtaggtcagcttcttgaggttgtatctcttgtgg 789 Query: 287 gtcttgggagctggcttggttgatttggccatgctaggatcagcgcggatggcagcgtga 346 || || | |||||| |||||||||||| ||||||| |||||||||||||| || Sbjct: 788 gtagccggttccttcttggtcgatttggccatggtaggatcggcgcggatggcagcatgg 729 Query: 347 accttcttgtaaactgcttccatgtcatcagctgagattcccttcttgatgtactcactg 406 ||||||||||| | || ||||||| ||||||| ||||||||||||| ||||||||| Sbjct: 728 accttcttgtacagtgattccatgccatcagcgtcaattcccttcttgaggtactcacta 669 Query: 407 aagtgagtttggtacttctcgggttcctcatctgctagcgacctcatgtagtcagcaaca 466 ||||| | |||| | ||||| |||||||| || || | ||||||||||||||||| || Sbjct: 668 aagtgggcttggaatttctcaggttcctcctcagccatagacctcatgtagtcagccacg 609 Query: 467 tgccctccatagatgtacttgcggtgaatctcagcatccagagacttctcgtccttcttg 526 ||||| || |||||||||||||||||||| |||| ||| || |||||||||||||||| Sbjct: 608 tgcccaccgtagatgtacttgcggtgaatatcagaatcaagctgcttctcgtccttcttg 549 Query: 527 aaaccagcaaatctcttgtcactgtggggaatgtccagaccaccgtccaaagctccctta 586 || |||||||| |||||||||||||| |||||||| |||||||| |||||||||||||| Sbjct: 548 aacccagcaaacctcttgtcactgtgaggaatgtcaagaccaccatccaaagctcccttg 489 Query: 587 agtgcaccaaacacacggt 605 || |||||||| ||||||| Sbjct: 488 agggcaccaaagacacggt 470
>gb|AY109375.1| Zea mays CL457_2 mRNA sequence Length = 1397 Score = 280 bits (141), Expect = 5e-72 Identities = 327/389 (84%) Strand = Plus / Minus Query: 217 gttgagcctctcgacgaggctggccttcctctcctcgtaggtgagcttcttggggttgta 276 ||||||||| || | ||||||||||||||||| ||| || || ||||||||||||||||| Sbjct: 933 gttgagcctttcaatgaggctggccttcctctgctcatatgtcagcttcttggggttgta 874 Query: 277 cctcttgtgagtcttgggagctggcttggttgatttggccatgctaggatcagcgcggat 336 |||||| || ||| || | |||||||||| ||| | ||| ||||||||| ||||| Sbjct: 873 cctcttatgctcctttggtggctgcttggttgacttgacaatggaaggatcagcacggat 814 Query: 337 ggcagcgtgaaccttcttgtaaactgcttccatgtcatcagctgagattcccttcttgat 396 |||||| || ||||||||||| | ||||||||||||||||| ||||||||||| || Sbjct: 813 ggcagcatggaccttcttgtacagagcttccatgtcatcagcctcaattcccttcttaat 754 Query: 397 gtactcactgaagtgagtttggtacttctcgggttcctcatctgctagcgacctcatgta 456 ||||||||||||||||| ||||||||||| || ||||| || || || ||||||||| Sbjct: 753 gtactcactgaagtgagactggtacttctctggctcctcttcagcgaggttcctcatgta 694 Query: 457 gtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatccagagacttctc 516 |||||||||||| || ||||||||||||||||| || || ||||||||||| ||| || Sbjct: 693 gtcagcaacatggccaccatagatgtacttgcgatggatatcagcatccagctgcttgtc 634 Query: 517 gtccttcttgaaaccagcaaatctcttgtcactgtggggaatgtccagaccaccgtccaa 576 |||||||||||||||||||| ||||| || ||||| ||||| ||||| ||||| ||||| Sbjct: 633 atccttcttgaaaccagcaaacctcttctcgctgtgaggaatatccaggccaccatccaa 574 Query: 577 agctcccttaagtgcaccaaacacacggt 605 ||||||||| || |||||||| ||||||| Sbjct: 573 agctcccttgagggcaccaaagacacggt 545
>gb|BT016492.1| Zea mays clone Contig325 mRNA sequence Length = 1365 Score = 264 bits (133), Expect = 3e-67 Identities = 325/389 (83%) Strand = Plus / Minus Query: 217 gttgagcctctcgacgaggctggccttcctctcctcgtaggtgagcttcttggggttgta 276 ||||||||| || | ||| ||||||||||||| |||||| || || |||||||||||||| Sbjct: 917 gttgagcctttcaatgagactggccttcctctgctcgtatgtcagtttcttggggttgta 858 Query: 277 cctcttgtgagtcttgggagctggcttggttgatttggccatgctaggatcagcgcggat 336 ||||||||| ||| || | |||||||||| ||| ||| ||||||||| ||||| Sbjct: 857 cctcttgtgctcctttggtggctgcttggttgacttgaccacagaaggatcagcacggat 798 Query: 337 ggcagcgtgaaccttcttgtaaactgcttccatgtcatcagctgagattcccttcttgat 396 |||||| || ||||||||||| | ||||||||||| ||||| ||||||||||| || Sbjct: 797 ggcagcatggaccttcttgtacagagcttccatgtcgtcagcctcaattcccttcttaat 738 Query: 397 gtactcactgaagtgagtttggtacttctcgggttcctcatctgctagcgacctcatgta 456 ||||||||||||||||| ||||||||||| || ||||| || || || ||||||||| Sbjct: 737 gtactcactgaagtgagactggtacttctctggctcctcttcagcgaggttcctcatgta 678 Query: 457 gtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatccagagacttctc 516 |||||||||||| || ||||||||||||||||| || || ||||||||||| ||| || Sbjct: 677 gtcagcaacatggccaccatagatgtacttgcgatggatatcagcatccagctgcttgtc 618 Query: 517 gtccttcttgaaaccagcaaatctcttgtcactgtggggaatgtccagaccaccgtccaa 576 |||||||||||||||||||| ||||| || ||||| ||||| ||||| ||||| ||||| Sbjct: 617 atccttcttgaaaccagcaaacctcttctcgctgtgaggaatatccaggccaccatccaa 558 Query: 577 agctcccttaagtgcaccaaacacacggt 605 ||||||||| || |||||||| ||||||| Sbjct: 557 agctcccttgagggcaccaaagacacggt 529
>gb|BT016417.1| Zea mays clone Contig250 mRNA sequence Length = 1212 Score = 176 bits (89), Expect = 5e-41 Identities = 314/389 (80%) Strand = Plus / Minus Query: 217 gttgagcctctcgacgaggctggccttcctctcctcgtaggtgagcttcttggggttgta 276 ||||||||| || | ||||||||||||||||| ||| || || ||||||||||||||||| Sbjct: 932 gttgagcctttcaatgaggctggccttcctctgctcatatgtcagcttcttggggttgta 873 Query: 277 cctcttgtgagtcttgggagctggcttggttgatttggccatgctaggatcagcgcggat 336 |||||| || ||| || | |||||||||| || | ||| |||||| || ||||| Sbjct: 872 cctcttatgctcctttggtggctgcttggttgacttaacaatggaaggatcggcacggat 813 Query: 337 ggcagcgtgaaccttcttgtaaactgcttccatgtcatcagctgagattcccttcttgat 396 |||||| || ||||||||||| | ||||| || |||||||| | ||||||||| || Sbjct: 812 ggcagcatggaccttcttgtacagcgcttctatttcatcagcctcaactcccttcttaat 753 Query: 397 gtactcactgaagtgagtttggtacttctcgggttcctcatctgctagcgacctcatgta 456 |||| |||||||||| | |||||||| || || ||||| || || || | ||||||| Sbjct: 752 gtacgcactgaagtggctctggtacttttctggctcctcttcagcaaggttcttcatgta 693 Query: 457 gtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatccagagacttctc 516 |||||||||||| || |||||||||||| ||||||| | |||||||||| ||| || Sbjct: 692 gtcagcaacatggccaccatagatgtacctgcggtgggtatcagcatccaactgcttgtc 633 Query: 517 gtccttcttgaaaccagcaaatctcttgtcactgtggggaatgtccagaccaccgtccaa 576 |||||||||||| |||||||| ||||| || ||||| ||||| ||||| || || ||||| Sbjct: 632 gtccttcttgaatccagcaaacctcttctcgctgtgaggaatatccaggcctccatccaa 573 Query: 577 agctcccttaagtgcaccaaacacacggt 605 |||||||| || |||||||| ||||||| Sbjct: 572 tgctcccttgagggcaccaaagacacggt 544
>gb|AY106024.1| Zea mays PCO063168 mRNA sequence Length = 620 Score = 159 bits (80), Expect = 1e-35 Identities = 185/220 (84%) Strand = Plus / Minus Query: 386 cccttcttgatgtactcactgaagtgagtttggtacttctcgggttcctcatctgctagc 445 ||||||||||||||||| |||||||||| |||||||||||||| |||||||| || || Sbjct: 587 cccttcttgatgtactcgctgaagtgagcctggtacttctcgggctcctcatcagccaga 528 Query: 446 gacctcatgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatcc 505 | |||| || ||||||||||| ||||||||||||||||| || || ||||||||| Sbjct: 527 ttcttcatatactcagcaacatggagaccatagatgtacttgcgatggatatcagcatcc 468 Query: 506 agagacttctcgtccttcttgaaaccagcaaatctcttgtcactgtggggaatgtccaga 565 || ||| || ||||||||||| |||||||| ||||| || ||||| ||||| || ||| Sbjct: 467 agctgcttatcatccttcttgaagccagcaaacctcttatcgctgtgaggaatatctaga 408 Query: 566 ccaccgtccaaagctcccttaagtgcaccaaacacacggt 605 ||||| |||||||||||||| || |||||||| ||||||| Sbjct: 407 ccaccatccaaagctcccttgagggcaccaaagacacggt 368
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 153 bits (77), Expect = 8e-34 Identities = 122/137 (89%) Strand = Plus / Minus Query: 448 cctcatgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatccag 507 ||||||||||||||| || ||||| || |||||||||||||||||||| |||| ||| || Sbjct: 38968845 cctcatgtagtcagccacgtgcccaccgtagatgtacttgcggtgaatatcagaatcaag 38968786 Query: 508 agacttctcgtccttcttgaaaccagcaaatctcttgtcactgtggggaatgtccagacc 567 |||||||||||||||||| |||||||| |||||||||||||| |||||||| ||||| Sbjct: 38968785 ctgcttctcgtccttcttgaacccagcaaacctcttgtcactgtgaggaatgtcaagacc 38968726 Query: 568 accgtccaaagctccct 584 ||| ||||||||||||| Sbjct: 38968725 accatccaaagctccct 38968709 Score = 153 bits (77), Expect = 8e-34 Identities = 122/137 (89%) Strand = Plus / Minus Query: 448 cctcatgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatccag 507 ||||||||||||||| || ||||| || |||||||||||||||||||| |||| ||| || Sbjct: 38963527 cctcatgtagtcagccacgtgcccaccgtagatgtacttgcggtgaatatcagaatcaag 38963468 Query: 508 agacttctcgtccttcttgaaaccagcaaatctcttgtcactgtggggaatgtccagacc 567 |||||||||||||||||| |||||||| |||||||||||||| |||||||| ||||| Sbjct: 38963467 ctgcttctcgtccttcttgaacccagcaaacctcttgtcactgtgaggaatgtcaagacc 38963408 Query: 568 accgtccaaagctccct 584 ||| ||||||||||||| Sbjct: 38963407 accatccaaagctccct 38963391 Score = 133 bits (67), Expect = 7e-28 Identities = 118/135 (87%) Strand = Plus / Minus Query: 301 cttggttgatttggccatgctaggatcagcgcggatggcagcgtgaaccttcttgtaaac 360 ||||||||||||||||||| |||||||||| ||||||||||| || ||||||||||| | Sbjct: 38969192 cttggttgatttggccatggtaggatcagcacggatggcagcatggaccttcttgtacag 38969133 Query: 361 tgcttccatgtcatcagctgagattcccttcttgatgtactcactgaagtgagtttggta 420 |||||||||| ||||||| ||||||||||||| ||||||||||||||| | |||| | Sbjct: 38969132 tgcttccatgccatcagcatcaattcccttcttgaggtactcactgaagtgggcttggaa 38969073 Query: 421 cttctcgggttcctc 435 ||||| |||||||| Sbjct: 38969072 tttctcaggttcctc 38969058 Score = 109 bits (55), Expect = 1e-20 Identities = 115/135 (85%) Strand = Plus / Minus Query: 301 cttggttgatttggccatgctaggatcagcgcggatggcagcgtgaaccttcttgtaaac 360 |||||| |||||||||||| ||||||| |||||||||||||| || ||||||||||| | Sbjct: 38963860 cttggtcgatttggccatggtaggatcggcgcggatggcagcatggaccttcttgtacag 38963801 Query: 361 tgcttccatgtcatcagctgagattcccttcttgatgtactcactgaagtgagtttggta 420 || ||||||| ||||||| ||||||||||||| ||||||||| ||||| | |||| | Sbjct: 38963800 tgattccatgccatcagcgtcaattcccttcttgaggtactcactaaagtgggcttggaa 38963741 Query: 421 cttctcgggttcctc 435 ||||| |||||||| Sbjct: 38963740 tttctcaggttcctc 38963726 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 227 tcgacgaggctggccttcctctcctcgtaggtgagcttcttggggttgta 276 |||||||| ||||||||||||| ||||||||| ||||||||| ||||||| Sbjct: 38964020 tcgacgagactggccttcctctgctcgtaggtcagcttcttgaggttgta 38963971 Score = 58.0 bits (29), Expect = 4e-05 Identities = 83/101 (82%) Strand = Plus / Minus Query: 176 tcctcgtcatcgtcggcggcaccagcagagttgttgagggcgttgagcctctcgacgagg 235 ||||||||||| || | |||||||||||| |||||| || || | || ||||| || Sbjct: 38969401 tcctcgtcatcatcatcagcaccagcagaggagttgagagcattcaatctttcgacaaga 38969342 Query: 236 ctggccttcctctcctcgtaggtgagcttcttggggttgta 276 ||||||||||||| |||||||| ||||||||| ||||||| Sbjct: 38969341 ctggccttcctctgttcgtaggttagcttcttgaggttgta 38969301
>dbj|AP003349.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0674H09 Length = 142955 Score = 153 bits (77), Expect = 8e-34 Identities = 122/137 (89%) Strand = Plus / Minus Query: 448 cctcatgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatccag 507 ||||||||||||||| || ||||| || |||||||||||||||||||| |||| ||| || Sbjct: 42478 cctcatgtagtcagccacgtgcccaccgtagatgtacttgcggtgaatatcagaatcaag 42419 Query: 508 agacttctcgtccttcttgaaaccagcaaatctcttgtcactgtggggaatgtccagacc 567 |||||||||||||||||| |||||||| |||||||||||||| |||||||| ||||| Sbjct: 42418 ctgcttctcgtccttcttgaacccagcaaacctcttgtcactgtgaggaatgtcaagacc 42359 Query: 568 accgtccaaagctccct 584 ||| ||||||||||||| Sbjct: 42358 accatccaaagctccct 42342 Score = 153 bits (77), Expect = 8e-34 Identities = 122/137 (89%) Strand = Plus / Minus Query: 448 cctcatgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatccag 507 ||||||||||||||| || ||||| || |||||||||||||||||||| |||| ||| || Sbjct: 37160 cctcatgtagtcagccacgtgcccaccgtagatgtacttgcggtgaatatcagaatcaag 37101 Query: 508 agacttctcgtccttcttgaaaccagcaaatctcttgtcactgtggggaatgtccagacc 567 |||||||||||||||||| |||||||| |||||||||||||| |||||||| ||||| Sbjct: 37100 ctgcttctcgtccttcttgaacccagcaaacctcttgtcactgtgaggaatgtcaagacc 37041 Query: 568 accgtccaaagctccct 584 ||| ||||||||||||| Sbjct: 37040 accatccaaagctccct 37024 Score = 133 bits (67), Expect = 7e-28 Identities = 118/135 (87%) Strand = Plus / Minus Query: 301 cttggttgatttggccatgctaggatcagcgcggatggcagcgtgaaccttcttgtaaac 360 ||||||||||||||||||| |||||||||| ||||||||||| || ||||||||||| | Sbjct: 42825 cttggttgatttggccatggtaggatcagcacggatggcagcatggaccttcttgtacag 42766 Query: 361 tgcttccatgtcatcagctgagattcccttcttgatgtactcactgaagtgagtttggta 420 |||||||||| ||||||| ||||||||||||| ||||||||||||||| | |||| | Sbjct: 42765 tgcttccatgccatcagcatcaattcccttcttgaggtactcactgaagtgggcttggaa 42706 Query: 421 cttctcgggttcctc 435 ||||| |||||||| Sbjct: 42705 tttctcaggttcctc 42691 Score = 109 bits (55), Expect = 1e-20 Identities = 115/135 (85%) Strand = Plus / Minus Query: 301 cttggttgatttggccatgctaggatcagcgcggatggcagcgtgaaccttcttgtaaac 360 |||||| |||||||||||| ||||||| |||||||||||||| || ||||||||||| | Sbjct: 37493 cttggtcgatttggccatggtaggatcggcgcggatggcagcatggaccttcttgtacag 37434 Query: 361 tgcttccatgtcatcagctgagattcccttcttgatgtactcactgaagtgagtttggta 420 || ||||||| ||||||| ||||||||||||| ||||||||| ||||| | |||| | Sbjct: 37433 tgattccatgccatcagcgtcaattcccttcttgaggtactcactaaagtgggcttggaa 37374 Query: 421 cttctcgggttcctc 435 ||||| |||||||| Sbjct: 37373 tttctcaggttcctc 37359 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 227 tcgacgaggctggccttcctctcctcgtaggtgagcttcttggggttgta 276 |||||||| ||||||||||||| ||||||||| ||||||||| ||||||| Sbjct: 37653 tcgacgagactggccttcctctgctcgtaggtcagcttcttgaggttgta 37604 Score = 58.0 bits (29), Expect = 4e-05 Identities = 83/101 (82%) Strand = Plus / Minus Query: 176 tcctcgtcatcgtcggcggcaccagcagagttgttgagggcgttgagcctctcgacgagg 235 ||||||||||| || | |||||||||||| |||||| || || | || ||||| || Sbjct: 43034 tcctcgtcatcatcatcagcaccagcagaggagttgagagcattcaatctttcgacaaga 42975 Query: 236 ctggccttcctctcctcgtaggtgagcttcttggggttgta 276 ||||||||||||| |||||||| ||||||||| ||||||| Sbjct: 42974 ctggccttcctctgttcgtaggttagcttcttgaggttgta 42934
>dbj|AP003316.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0696G06 Length = 142571 Score = 153 bits (77), Expect = 8e-34 Identities = 122/137 (89%) Strand = Plus / Minus Query: 448 cctcatgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatccag 507 ||||||||||||||| || ||||| || |||||||||||||||||||| |||| ||| || Sbjct: 133631 cctcatgtagtcagccacgtgcccaccgtagatgtacttgcggtgaatatcagaatcaag 133572 Query: 508 agacttctcgtccttcttgaaaccagcaaatctcttgtcactgtggggaatgtccagacc 567 |||||||||||||||||| |||||||| |||||||||||||| |||||||| ||||| Sbjct: 133571 ctgcttctcgtccttcttgaacccagcaaacctcttgtcactgtgaggaatgtcaagacc 133512 Query: 568 accgtccaaagctccct 584 ||| ||||||||||||| Sbjct: 133511 accatccaaagctccct 133495 Score = 153 bits (77), Expect = 8e-34 Identities = 122/137 (89%) Strand = Plus / Minus Query: 448 cctcatgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatccag 507 ||||||||||||||| || ||||| || |||||||||||||||||||| |||| ||| || Sbjct: 128313 cctcatgtagtcagccacgtgcccaccgtagatgtacttgcggtgaatatcagaatcaag 128254 Query: 508 agacttctcgtccttcttgaaaccagcaaatctcttgtcactgtggggaatgtccagacc 567 |||||||||||||||||| |||||||| |||||||||||||| |||||||| ||||| Sbjct: 128253 ctgcttctcgtccttcttgaacccagcaaacctcttgtcactgtgaggaatgtcaagacc 128194 Query: 568 accgtccaaagctccct 584 ||| ||||||||||||| Sbjct: 128193 accatccaaagctccct 128177 Score = 133 bits (67), Expect = 7e-28 Identities = 118/135 (87%) Strand = Plus / Minus Query: 301 cttggttgatttggccatgctaggatcagcgcggatggcagcgtgaaccttcttgtaaac 360 ||||||||||||||||||| |||||||||| ||||||||||| || ||||||||||| | Sbjct: 133978 cttggttgatttggccatggtaggatcagcacggatggcagcatggaccttcttgtacag 133919 Query: 361 tgcttccatgtcatcagctgagattcccttcttgatgtactcactgaagtgagtttggta 420 |||||||||| ||||||| ||||||||||||| ||||||||||||||| | |||| | Sbjct: 133918 tgcttccatgccatcagcatcaattcccttcttgaggtactcactgaagtgggcttggaa 133859 Query: 421 cttctcgggttcctc 435 ||||| |||||||| Sbjct: 133858 tttctcaggttcctc 133844 Score = 109 bits (55), Expect = 1e-20 Identities = 115/135 (85%) Strand = Plus / Minus Query: 301 cttggttgatttggccatgctaggatcagcgcggatggcagcgtgaaccttcttgtaaac 360 |||||| |||||||||||| ||||||| |||||||||||||| || ||||||||||| | Sbjct: 128646 cttggtcgatttggccatggtaggatcggcgcggatggcagcatggaccttcttgtacag 128587 Query: 361 tgcttccatgtcatcagctgagattcccttcttgatgtactcactgaagtgagtttggta 420 || ||||||| ||||||| ||||||||||||| ||||||||| ||||| | |||| | Sbjct: 128586 tgattccatgccatcagcgtcaattcccttcttgaggtactcactaaagtgggcttggaa 128527 Query: 421 cttctcgggttcctc 435 ||||| |||||||| Sbjct: 128526 tttctcaggttcctc 128512 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 227 tcgacgaggctggccttcctctcctcgtaggtgagcttcttggggttgta 276 |||||||| ||||||||||||| ||||||||| ||||||||| ||||||| Sbjct: 128806 tcgacgagactggccttcctctgctcgtaggtcagcttcttgaggttgta 128757 Score = 58.0 bits (29), Expect = 4e-05 Identities = 83/101 (82%) Strand = Plus / Minus Query: 176 tcctcgtcatcgtcggcggcaccagcagagttgttgagggcgttgagcctctcgacgagg 235 ||||||||||| || | |||||||||||| |||||| || || | || ||||| || Sbjct: 134187 tcctcgtcatcatcatcagcaccagcagaggagttgagagcattcaatctttcgacaaga 134128 Query: 236 ctggccttcctctcctcgtaggtgagcttcttggggttgta 276 ||||||||||||| |||||||| ||||||||| ||||||| Sbjct: 134127 ctggccttcctctgttcgtaggttagcttcttgaggttgta 134087
>ref|NM_123336.3| Arabidopsis thaliana 5S rRNA binding / structural constituent of ribosome AT5G39740 mRNA, complete cds Length = 1223 Score = 111 bits (56), Expect = 3e-21 Identities = 74/80 (92%) Strand = Plus / Minus Query: 526 gaaaccagcaaatctcttgtcactgtggggaatgtccagaccaccgtccaaagctccctt 585 ||||||||||||||||||||||||||| || || || ||||| ||||||||||||||||| Sbjct: 588 gaaaccagcaaatctcttgtcactgtgagggatatcaagacctccgtccaaagctccctt 529 Query: 586 aagtgcaccaaacacacggt 605 ||||||||||||||||||| Sbjct: 528 gagtgcaccaaacacacggt 509
>gb|BT008706.1| Arabidopsis thaliana At5g39740 gene, complete cds Length = 906 Score = 111 bits (56), Expect = 3e-21 Identities = 74/80 (92%) Strand = Plus / Minus Query: 526 gaaaccagcaaatctcttgtcactgtggggaatgtccagaccaccgtccaaagctccctt 585 ||||||||||||||||||||||||||| || || || ||||| ||||||||||||||||| Sbjct: 546 gaaaccagcaaatctcttgtcactgtgagggatatcaagacctccgtccaaagctccctt 487 Query: 586 aagtgcaccaaacacacggt 605 ||||||||||||||||||| Sbjct: 486 gagtgcaccaaacacacggt 467
>gb|AY093123.1| Arabidopsis thaliana ribosomal protein L5 - like (At5g39740) mRNA, complete cds Length = 1100 Score = 111 bits (56), Expect = 3e-21 Identities = 74/80 (92%) Strand = Plus / Minus Query: 526 gaaaccagcaaatctcttgtcactgtggggaatgtccagaccaccgtccaaagctccctt 585 ||||||||||||||||||||||||||| || || || ||||| ||||||||||||||||| Sbjct: 576 gaaaccagcaaatctcttgtcactgtgagggatatcaagacctccgtccaaagctccctt 517 Query: 586 aagtgcaccaaacacacggt 605 ||||||||||||||||||| Sbjct: 516 gagtgcaccaaacacacggt 497
>gb|AY079020.1| Arabidopsis thaliana AT5g39740/MKM21_30 mRNA, complete cds Length = 1128 Score = 111 bits (56), Expect = 3e-21 Identities = 74/80 (92%) Strand = Plus / Minus Query: 526 gaaaccagcaaatctcttgtcactgtggggaatgtccagaccaccgtccaaagctccctt 585 ||||||||||||||||||||||||||| || || || ||||| ||||||||||||||||| Sbjct: 588 gaaaccagcaaatctcttgtcactgtgagggatatcaagacctccgtccaaagctccctt 529 Query: 586 aagtgcaccaaacacacggt 605 ||||||||||||||||||| Sbjct: 528 gagtgcaccaaacacacggt 509
>emb|BX831866.1|CNS09ZT2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH35ZF09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1048 Score = 103 bits (52), Expect = 7e-19 Identities = 73/80 (91%) Strand = Plus / Minus Query: 526 gaaaccagcaaatctcttgtcactgtggggaatgtccagaccaccgtccaaagctccctt 585 ||||||||||||||||||||||||||| || || || ||||| ||||||||||||||||| Sbjct: 565 gaaaccagcaaatctcttgtcactgtgagggatatcaagacctccgtccaaagctccctt 506 Query: 586 aagtgcaccaaacacacggt 605 ||| ||||||||||||||| Sbjct: 505 gagttcaccaaacacacggt 486
>dbj|AB049724.1| Pisum sativum ssa-15 mRNA for putative senescence-associated protein, complete cds Length = 1100 Score = 93.7 bits (47), Expect = 6e-16 Identities = 71/79 (89%) Strand = Plus / Minus Query: 527 aaaccagcaaatctcttgtcactgtggggaatgtccagaccaccgtccaaagctccctta 586 ||||||||||| || ||||||||||| ||||| |||| ||| || |||||||||||||| Sbjct: 607 aaaccagcaaaccttttgtcactgtgaggaatatccaaacctccatccaaagctcccttg 548 Query: 587 agtgcaccaaacacacggt 605 ||||||||||||||||||| Sbjct: 547 agtgcaccaaacacacggt 529 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 257 gtgagcttcttggggttgtacctcttgtg 285 ||||||||||| |||||||||||||||| Sbjct: 877 gtgagcttcttcaggttgtacctcttgtg 849 Score = 40.1 bits (20), Expect = 8.2 Identities = 65/80 (81%) Strand = Plus / Minus Query: 338 gcagcgtgaaccttcttgtaaactgcttccatgtcatcagctgagattcccttcttgatg 397 ||||| |||||||||||||||| | | || || |||||||| || || |||||||| Sbjct: 796 gcagcatgaaccttcttgtaaagttcctcaattccatcagcttctatccctttcttgata 737 Query: 398 tactcactgaagtgagtttg 417 || | ||||||||||||||| Sbjct: 736 tattgactgaagtgagtttg 717
>emb|BX832617.1|CNS09YMN Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH85ZA07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1060 Score = 91.7 bits (46), Expect = 3e-15 Identities = 70/78 (89%) Strand = Plus / Minus Query: 526 gaaaccagcaaatctcttgtcactgtggggaatgtccagaccaccgtccaaagctccctt 585 |||||||||||||||||| ||||| || || || || ||||| ||||||||||||||||| Sbjct: 573 gaaaccagcaaatctcttttcactttgagggatatcaagacctccgtccaaagctccctt 514 Query: 586 aagtgcaccaaacacacg 603 ||||||||||||||||| Sbjct: 513 gagtgcaccaaacacacg 496
>ref|NM_113448.2| Arabidopsis thaliana ATL5 (A. THALIANA RIBOSOMAL PROTEIN L5); structural constituent of ribosome AT3G25520 (ATL5) mRNA, complete cds Length = 1254 Score = 89.7 bits (45), Expect = 1e-14 Identities = 174/217 (80%) Strand = Plus / Minus Query: 389 ttcttgatgtactcactgaagtgagtttggtacttctcgggttcctcatctgctagcgac 448 ||||||||||| |||||||||||||||| ||||||| || || || ||| | | | | Sbjct: 745 ttcttgatgtaagcactgaagtgagtttgtaacttctctggctcatcttctcccaacagc 686 Query: 449 ctcatgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatccaga 508 ||||||||| | ||||| || ||||||||||| || | ||| || |||||||| || Sbjct: 685 ttcatgtagtttgagacatggccaccatagatgtagttcctgtggatttcagcatcaagt 626 Query: 509 gacttctcgtccttcttgaaaccagcaaatctcttgtcactgtggggaatgtccagacca 568 ||| | ||||| | ||| ||||||||||||||||||||||| || || || |||||| Sbjct: 625 tgcttgttctccttgtggaacccagcaaatctcttgtcactgtgagggatatcaagacca 566 Query: 569 ccgtccaaagctcccttaagtgcaccaaacacacggt 605 || |||||||| |||||||| ||||| |||||||||| Sbjct: 565 ccatccaaagcacccttaagagcaccgaacacacggt 529 Score = 42.1 bits (21), Expect = 2.1 Identities = 39/45 (86%) Strand = Plus / Minus Query: 241 cttcctctcctcgtaggtgagcttcttggggttgtacctcttgtg 285 ||||||||||||||| || || ||||| ||||||||||||||| Sbjct: 893 cttcctctcctcgtaagtaagtttcttcaagttgtacctcttgtg 849
>gb|BT000411.1| Arabidopsis thaliana putative ribosomal protein (At3g25520) mRNA, complete cds Length = 969 Score = 89.7 bits (45), Expect = 1e-14 Identities = 174/217 (80%) Strand = Plus / Minus Query: 389 ttcttgatgtactcactgaagtgagtttggtacttctcgggttcctcatctgctagcgac 448 ||||||||||| |||||||||||||||| ||||||| || || || ||| | | | | Sbjct: 683 ttcttgatgtaagcactgaagtgagtttgtaacttctctggctcatcttctcccaacagc 624 Query: 449 ctcatgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatccaga 508 ||||||||| | ||||| || ||||||||||| || | ||| || |||||||| || Sbjct: 623 ttcatgtagtttgagacatggccaccatagatgtagttcctgtggatttcagcatcaagt 564 Query: 509 gacttctcgtccttcttgaaaccagcaaatctcttgtcactgtggggaatgtccagacca 568 ||| | ||||| | ||| ||||||||||||||||||||||| || || || |||||| Sbjct: 563 tgcttgttctccttgtggaacccagcaaatctcttgtcactgtgagggatatcaagacca 504 Query: 569 ccgtccaaagctcccttaagtgcaccaaacacacggt 605 || |||||||| |||||||| ||||| |||||||||| Sbjct: 503 ccatccaaagcacccttaagagcaccgaacacacggt 467 Score = 42.1 bits (21), Expect = 2.1 Identities = 39/45 (86%) Strand = Plus / Minus Query: 241 cttcctctcctcgtaggtgagcttcttggggttgtacctcttgtg 285 ||||||||||||||| || || ||||| ||||||||||||||| Sbjct: 831 cttcctctcctcgtaagtaagtttcttcaagttgtacctcttgtg 787
>gb|BT008705.1| Arabidopsis thaliana At3g25520 gene, complete cds Length = 906 Score = 89.7 bits (45), Expect = 1e-14 Identities = 174/217 (80%) Strand = Plus / Minus Query: 389 ttcttgatgtactcactgaagtgagtttggtacttctcgggttcctcatctgctagcgac 448 ||||||||||| |||||||||||||||| ||||||| || || || ||| | | | | Sbjct: 683 ttcttgatgtaagcactgaagtgagtttgtaacttctctggctcatcttctcccaacagc 624 Query: 449 ctcatgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatccaga 508 ||||||||| | ||||| || ||||||||||| || | ||| || |||||||| || Sbjct: 623 ttcatgtagtttgagacatggccaccatagatgtagttcctgtggatttcagcatcaagt 564 Query: 509 gacttctcgtccttcttgaaaccagcaaatctcttgtcactgtggggaatgtccagacca 568 ||| | ||||| | ||| ||||||||||||||||||||||| || || || |||||| Sbjct: 563 tgcttgttctccttgtggaacccagcaaatctcttgtcactgtgagggatatcaagacca 504 Query: 569 ccgtccaaagctcccttaagtgcaccaaacacacggt 605 || |||||||| |||||||| ||||| |||||||||| Sbjct: 503 ccatccaaagcacccttaagagcaccgaacacacggt 467 Score = 42.1 bits (21), Expect = 2.1 Identities = 39/45 (86%) Strand = Plus / Minus Query: 241 cttcctctcctcgtaggtgagcttcttggggttgtacctcttgtg 285 ||||||||||||||| || || ||||| ||||||||||||||| Sbjct: 831 cttcctctcctcgtaagtaagtttcttcaagttgtacctcttgtg 787
>gb|AY136319.1| Arabidopsis thaliana putative ribosomal protein (At3g25520) mRNA, complete cds Length = 1161 Score = 89.7 bits (45), Expect = 1e-14 Identities = 174/217 (80%) Strand = Plus / Minus Query: 389 ttcttgatgtactcactgaagtgagtttggtacttctcgggttcctcatctgctagcgac 448 ||||||||||| |||||||||||||||| ||||||| || || || ||| | | | | Sbjct: 742 ttcttgatgtaagcactgaagtgagtttgtaacttctctggctcatcttctcccaacagc 683 Query: 449 ctcatgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatccaga 508 ||||||||| | ||||| || ||||||||||| || | ||| || |||||||| || Sbjct: 682 ttcatgtagtttgagacatggccaccatagatgtagttcctgtggatttcagcatcaagt 623 Query: 509 gacttctcgtccttcttgaaaccagcaaatctcttgtcactgtggggaatgtccagacca 568 ||| | ||||| | ||| ||||||||||||||||||||||| || || || |||||| Sbjct: 622 tgcttgttctccttgtggaacccagcaaatctcttgtcactgtgagggatatcaagacca 563 Query: 569 ccgtccaaagctcccttaagtgcaccaaacacacggt 605 || |||||||| |||||||| ||||| |||||||||| Sbjct: 562 ccatccaaagcacccttaagagcaccgaacacacggt 526 Score = 42.1 bits (21), Expect = 2.1 Identities = 39/45 (86%) Strand = Plus / Minus Query: 241 cttcctctcctcgtaggtgagcttcttggggttgtacctcttgtg 285 ||||||||||||||| || || ||||| ||||||||||||||| Sbjct: 890 cttcctctcctcgtaagtaagtttcttcaagttgtacctcttgtg 846
>gb|AY065103.1| Arabidopsis thaliana 60S ribosomal protein L5 (At3g25550) mRNA, complete cds Length = 1151 Score = 89.7 bits (45), Expect = 1e-14 Identities = 174/217 (80%) Strand = Plus / Minus Query: 389 ttcttgatgtactcactgaagtgagtttggtacttctcgggttcctcatctgctagcgac 448 ||||||||||| |||||||||||||||| ||||||| || || || ||| | | | | Sbjct: 740 ttcttgatgtaagcactgaagtgagtttgtaacttctctggctcatcttctcccaacagc 681 Query: 449 ctcatgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatccaga 508 ||||||||| | ||||| || ||||||||||| || | ||| || |||||||| || Sbjct: 680 ttcatgtagtttgagacatggccaccatagatgtagttcctgtggatttcagcatcaagt 621 Query: 509 gacttctcgtccttcttgaaaccagcaaatctcttgtcactgtggggaatgtccagacca 568 ||| | ||||| | ||| ||||||||||||||||||||||| || || || |||||| Sbjct: 620 tgcttgttctccttgtggaacccagcaaatctcttgtcactgtgagggatatcaagacca 561 Query: 569 ccgtccaaagctcccttaagtgcaccaaacacacggt 605 || |||||||| |||||||| ||||| |||||||||| Sbjct: 560 ccatccaaagcacccttaagagcaccgaacacacggt 524 Score = 42.1 bits (21), Expect = 2.1 Identities = 39/45 (86%) Strand = Plus / Minus Query: 241 cttcctctcctcgtaggtgagcttcttggggttgtacctcttgtg 285 ||||||||||||||| || || ||||| ||||||||||||||| Sbjct: 888 cttcctctcctcgtaagtaagtttcttcaagttgtacctcttgtg 844
>gb|AY081701.1| Arabidopsis thaliana 60S ribosomal protein L5 (At3g25550) mRNA, complete cds Length = 925 Score = 89.7 bits (45), Expect = 1e-14 Identities = 174/217 (80%) Strand = Plus / Minus Query: 389 ttcttgatgtactcactgaagtgagtttggtacttctcgggttcctcatctgctagcgac 448 ||||||||||| |||||||||||||||| ||||||| || || || ||| | | | | Sbjct: 683 ttcttgatgtaagcactgaagtgagtttgtaacttctctggctcatcttctcccaacagc 624 Query: 449 ctcatgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatccaga 508 ||||||||| | ||||| || ||||||||||| || | ||| || |||||||| || Sbjct: 623 ttcatgtagtttgagacatggccaccatagatgtagttcctgtggatttcagcatcaagt 564 Query: 509 gacttctcgtccttcttgaaaccagcaaatctcttgtcactgtggggaatgtccagacca 568 ||| | ||||| | ||| ||||||||||||||||||||||| || || || |||||| Sbjct: 563 tgcttgttctccttgtggaacccagcaaatctcttgtcactgtgagggatatcaagacca 504 Query: 569 ccgtccaaagctcccttaagtgcaccaaacacacggt 605 || |||||||| |||||||| ||||| |||||||||| Sbjct: 503 ccatccaaagcacccttaagagcaccgaacacacggt 467 Score = 42.1 bits (21), Expect = 2.1 Identities = 39/45 (86%) Strand = Plus / Minus Query: 241 cttcctctcctcgtaggtgagcttcttggggttgtacctcttgtg 285 ||||||||||||||| || || ||||| ||||||||||||||| Sbjct: 831 cttcctctcctcgtaagtaagtttcttcaagttgtacctcttgtg 787
>gb|AY054161.1| Arabidopsis thaliana AT5g39740/MKM21_30 mRNA, complete cds Length = 1108 Score = 89.7 bits (45), Expect = 1e-14 Identities = 174/217 (80%) Strand = Plus / Minus Query: 389 ttcttgatgtactcactgaagtgagtttggtacttctcgggttcctcatctgctagcgac 448 ||||||||||| |||||||||||||||| ||||||| || || || ||| | | | | Sbjct: 730 ttcttgatgtaagcactgaagtgagtttgtaacttctctggctcatcttctcccaacagc 671 Query: 449 ctcatgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatccaga 508 ||||||||| | ||||| || ||||||||||| || | ||| || |||||||| || Sbjct: 670 ttcatgtagtttgagacatggccaccatagatgtagttcctgtggatttcagcatcaagt 611 Query: 509 gacttctcgtccttcttgaaaccagcaaatctcttgtcactgtggggaatgtccagacca 568 ||| | ||||| | ||| ||||||||||||||||||||||| || || || |||||| Sbjct: 610 tgcttgttctccttgtggaacccagcaaatctcttgtcactgtgagggatatcaagacca 551 Query: 569 ccgtccaaagctcccttaagtgcaccaaacacacggt 605 || |||||||| |||||||| ||||| |||||||||| Sbjct: 550 ccatccaaagcacccttaagagcaccgaacacacggt 514 Score = 42.1 bits (21), Expect = 2.1 Identities = 39/45 (86%) Strand = Plus / Minus Query: 241 cttcctctcctcgtaggtgagcttcttggggttgtacctcttgtg 285 ||||||||||||||| || || ||||| ||||||||||||||| Sbjct: 878 cttcctctcctcgtaagtaagtttcttcaagttgtacctcttgtg 834
>gb|AY186611.1| Arabidopsis thaliana ribosomal protein L5 mRNA, complete cds Length = 906 Score = 89.7 bits (45), Expect = 1e-14 Identities = 174/217 (80%) Strand = Plus / Minus Query: 389 ttcttgatgtactcactgaagtgagtttggtacttctcgggttcctcatctgctagcgac 448 ||||||||||| |||||||||||||||| ||||||| || || || ||| | | | | Sbjct: 683 ttcttgatgtaagcactgaagtgagtttgtaacttctctggctcatcttctcccaacagc 624 Query: 449 ctcatgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatccaga 508 ||||||||| | ||||| || ||||||||||| || | ||| || |||||||| || Sbjct: 623 ttcatgtagtttgagacatggccaccatagatgtagttcctgtggatttcagcatcaagt 564 Query: 509 gacttctcgtccttcttgaaaccagcaaatctcttgtcactgtggggaatgtccagacca 568 ||| | ||||| | ||| ||||||||||||||||||||||| || || || |||||| Sbjct: 563 tgcttgttctccttgtggaacccagcaaatctcttgtcactgtgagggatatcaagacca 504 Query: 569 ccgtccaaagctcccttaagtgcaccaaacacacggt 605 || |||||||| |||||||| ||||| |||||||||| Sbjct: 503 ccatccaaagcacccttaagagcaccgaacacacggt 467 Score = 42.1 bits (21), Expect = 2.1 Identities = 39/45 (86%) Strand = Plus / Minus Query: 241 cttcctctcctcgtaggtgagcttcttggggttgtacctcttgtg 285 ||||||||||||||| || || ||||| ||||||||||||||| Sbjct: 831 cttcctctcctcgtaagtaagtttcttcaagttgtacctcttgtg 787
>emb|BX823967.1|CNS0A6W1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH10ZG11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1076 Score = 89.7 bits (45), Expect = 1e-14 Identities = 174/217 (80%) Strand = Plus / Minus Query: 389 ttcttgatgtactcactgaagtgagtttggtacttctcgggttcctcatctgctagcgac 448 ||||||||||| |||||||||||||||| ||||||| || || || ||| | | | | Sbjct: 715 ttcttgatgtaagcactgaagtgagtttgtaacttctctggctcatcttctcccaacagc 656 Query: 449 ctcatgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatccaga 508 ||||||||| | ||||| || ||||||||||| || | ||| || |||||||| || Sbjct: 655 ttcatgtagtttgagacatggccaccatagatgtagttcctgtggatttcagcatcaagt 596 Query: 509 gacttctcgtccttcttgaaaccagcaaatctcttgtcactgtggggaatgtccagacca 568 ||| | ||||| | ||| ||||||||||||||||||||||| || || || |||||| Sbjct: 595 tgcttgttctccttgtggaacccagcaaatctcttgtcactgtgagggatatcaagacca 536 Query: 569 ccgtccaaagctcccttaagtgcaccaaacacacggt 605 || |||||||| |||||||| ||||| |||||||||| Sbjct: 535 ccatccaaagcacccttaagagcaccgaacacacggt 499 Score = 42.1 bits (21), Expect = 2.1 Identities = 39/45 (86%) Strand = Plus / Minus Query: 241 cttcctctcctcgtaggtgagcttcttggggttgtacctcttgtg 285 ||||||||||||||| || || ||||| ||||||||||||||| Sbjct: 863 cttcctctcctcgtaagtaagtttcttcaagttgtacctcttgtg 819
>gb|AY087197.1| Arabidopsis thaliana clone 32753 mRNA, complete sequence Length = 1248 Score = 89.7 bits (45), Expect = 1e-14 Identities = 174/217 (80%) Strand = Plus / Minus Query: 389 ttcttgatgtactcactgaagtgagtttggtacttctcgggttcctcatctgctagcgac 448 ||||||||||| |||||||||||||||| ||||||| || || || ||| | | | | Sbjct: 745 ttcttgatgtaagcactgaagtgagtttgtaacttctctggctcatcttctcccaacagc 686 Query: 449 ctcatgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatccaga 508 ||||||||| | ||||| || ||||||||||| || | ||| || |||||||| || Sbjct: 685 ttcatgtagtttgagacatggccaccatagatgtagttcctgtggatttcagcatcaagt 626 Query: 509 gacttctcgtccttcttgaaaccagcaaatctcttgtcactgtggggaatgtccagacca 568 ||| | ||||| | ||| ||||||||||||||||||||||| || || || |||||| Sbjct: 625 tgcttgttctccttgtggaacccagcaaatctcttgtcactgtgagggatatcaagacca 566 Query: 569 ccgtccaaagctcccttaagtgcaccaaacacacggt 605 || |||||||| |||||||| ||||| |||||||||| Sbjct: 565 ccatccaaagcacccttaagagcaccgaacacacggt 529 Score = 42.1 bits (21), Expect = 2.1 Identities = 39/45 (86%) Strand = Plus / Minus Query: 241 cttcctctcctcgtaggtgagcttcttggggttgtacctcttgtg 285 ||||||||||||||| || || ||||| ||||||||||||||| Sbjct: 893 cttcctctcctcgtaagtaagtttcttcaagttgtacctcttgtg 849
>gb|BT002427.1| Arabidopsis thaliana ribosomal protein, putative (At3g25520) mRNA, complete cds Length = 1117 Score = 89.7 bits (45), Expect = 1e-14 Identities = 174/217 (80%) Strand = Plus / Minus Query: 389 ttcttgatgtactcactgaagtgagtttggtacttctcgggttcctcatctgctagcgac 448 ||||||||||| |||||||||||||||| ||||||| || || || ||| | | | | Sbjct: 740 ttcttgatgtaagcactgaagtgagtttgtaacttctctggctcatcttctcccaacagc 681 Query: 449 ctcatgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatccaga 508 ||||||||| | ||||| || ||||||||||| || | ||| || |||||||| || Sbjct: 680 ttcatgtagtttgagacatggccaccatagatgtagttcctgtggatttcagcatcaagt 621 Query: 509 gacttctcgtccttcttgaaaccagcaaatctcttgtcactgtggggaatgtccagacca 568 ||| | ||||| | ||| ||||||||||||||||||||||| || || || |||||| Sbjct: 620 tgcttgttctccttgtggaacccagcaaatctcttgtcactgtgagggatatcaagacca 561 Query: 569 ccgtccaaagctcccttaagtgcaccaaacacacggt 605 || |||||||| |||||||| ||||| |||||||||| Sbjct: 560 ccatccaaagcacccttaagagcaccgaacacacggt 524 Score = 42.1 bits (21), Expect = 2.1 Identities = 39/45 (86%) Strand = Plus / Minus Query: 241 cttcctctcctcgtaggtgagcttcttggggttgtacctcttgtg 285 ||||||||||||||| || || ||||| ||||||||||||||| Sbjct: 888 cttcctctcctcgtaagtaagtttcttcaagttgtacctcttgtg 844
>gb|AY365248.1| Cucumis sativus 60S ribosomal protein L5 mRNA, complete cds Length = 1171 Score = 83.8 bits (42), Expect = 6e-13 Identities = 63/70 (90%) Strand = Plus / Minus Query: 528 aaccagcaaatctcttgtcactgtggggaatgtccagaccaccgtccaaagctcccttaa 587 |||||||||| |||||||||||||| |||||||||| ||||| |||||||||||||| | Sbjct: 565 aaccagcaaacctcttgtcactgtgaggaatgtccaatccaccatccaaagctcccttca 506 Query: 588 gtgcaccaaa 597 | |||||||| Sbjct: 505 gagcaccaaa 496 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 386 cccttcttgatgtactcactgaagtgagtttggtacttctcgggttc 432 ||||||||||||||||| |||||||||| ||| || ||||| ||||| Sbjct: 707 cccttcttgatgtactcgctgaagtgagattgatatttctcaggttc 661
>dbj|AB016876.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MKM21 Length = 44499 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Minus Query: 526 gaaaccagcaaatctcttgtcactgtggggaatgtccagaccaccgtccaaagctccct 584 ||||||||||||||||||||||||||| || || || ||||| |||||||||||||||| Sbjct: 8206 gaaaccagcaaatctcttgtcactgtgagggatatcaagacctccgtccaaagctccct 8148 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 582 ccttaagtgcaccaaacacacggt 605 |||| ||||||||||||||||||| Sbjct: 8034 ccttgagtgcaccaaacacacggt 8011
>emb|X95566.1|PS5SRNA P.sativum 5S rRNA gene Length = 1115 Score = 77.8 bits (39), Expect = 4e-11 Identities = 86/98 (87%), Gaps = 4/98 (4%) Strand = Plus / Minus Query: 511 cttctcgtccttcttg--aaaccagcaaatctcttgtcactgtggggaatgtccagacca 568 |||||||||||| ||| ||||||||||| |||||||||||||| ||||| |||| ||| Sbjct: 570 cttctcgtccttgttgcaaaaccagcaaacctcttgtcactgtgaggaatatccaaacct 511 Query: 569 ccgtccaaagc-tcccttaagtg-caccaaacacacgg 604 || |||||||| |||||| |||| |||||||||||||| Sbjct: 510 ccatccaaagcttcccttgagtgtcaccaaacacacgg 473
>dbj|AB025639.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MWL2 Length = 84896 Score = 63.9 bits (32), Expect = 6e-07 Identities = 155/196 (79%) Strand = Plus / Plus Query: 389 ttcttgatgtactcactgaagtgagtttggtacttctcgggttcctcatctgctagcgac 448 ||||||||||| |||||||||||||||| ||||||| || || || ||| | | | | Sbjct: 56653 ttcttgatgtaagcactgaagtgagtttgtaacttctctggctcatcttctcccaacagc 56712 Query: 449 ctcatgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatccaga 508 ||||||||| | ||||| || ||||||||||| || | ||| || |||||||| || Sbjct: 56713 ttcatgtagtttgagacatggccaccatagatgtagttcctgtggatttcagcatcaagt 56772 Query: 509 gacttctcgtccttcttgaaaccagcaaatctcttgtcactgtggggaatgtccagacca 568 ||| | ||||| | ||| ||||||||||||||||||||||| || || || |||||| Sbjct: 56773 tgcttgttctccttgtggaacccagcaaatctcttgtcactgtgagggatatcaagacca 56832 Query: 569 ccgtccaaagctccct 584 || |||||||| |||| Sbjct: 56833 ccatccaaagcaccct 56848
>dbj|AB001583.1| Solanum melongena mRNA for ribosomal protein L5, partial cds Length = 399 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 242 ttcctctcctcgtaggtgagcttcttggggttgtacctcttgtgagtcttggg 294 |||||||| || ||||| |||||||| |||||||||||||||| |||||||| Sbjct: 288 ttcctctcttcataggtcagcttcttaaggttgtacctcttgtgtgtcttggg 236 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Minus Query: 450 tcatgtagtcagcaacatgccctccatagatgtacttgcggtgaa 494 ||||||| |||||||||| || |||||||| ||||||||||||| Sbjct: 80 tcatgtatgcagcaacatggccaccatagatatacttgcggtgaa 36 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 335 atggcagcgtgaaccttcttgta 357 ||||||||||||||||||||||| Sbjct: 195 atggcagcgtgaaccttcttgta 173
>gb|DQ228334.1| Solanum tuberosum clone 145F02 unknown mRNA Length = 1114 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 242 ttcctctcctcgtaggtgagcttcttggggttgtacctcttgtgagtcttgggag 296 |||||||| || || || |||||||| |||||||||||||||| |||||||||| Sbjct: 864 ttcctctcttcataagtcagcttcttaaggttgtacctcttgtgtgtcttgggag 810 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 329 gcgcggatggcagcgtgaaccttcttgta 357 ||||| |||||||| |||||||||||||| Sbjct: 777 gcgcgtatggcagcatgaaccttcttgta 749
>gb|BT012733.1| Lycopersicon esculentum clone 113662F, mRNA sequence Length = 1161 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 242 ttcctctcctcgtaggtgagcttcttggggttgtacctcttgtgagtcttgggag 296 |||||||| || || || |||||||| |||||||||||||||| |||||||||| Sbjct: 887 ttcctctcttcataagtcagcttcttaaggttgtacctcttgtgtgtcttgggag 833 Score = 40.1 bits (20), Expect = 8.2 Identities = 32/36 (88%) Strand = Plus / Minus Query: 459 cagcaacatgccctccatagatgtacttgcggtgaa 494 ||||||| || || |||||||| ||||||||||||| Sbjct: 670 cagcaacgtggccaccatagatatacttgcggtgaa 635 Score = 40.1 bits (20), Expect = 8.2 Identities = 35/40 (87%) Strand = Plus / Minus Query: 566 ccaccgtccaaagctcccttaagtgcaccaaacacacggt 605 ||||| ||||| || ||||| || |||||||||||||||| Sbjct: 563 ccaccatccaatgcacccttgagagcaccaaacacacggt 524
>dbj|AP004484.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT06I17, TM0017, complete sequence Length = 121127 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 530 ccagcaaatctcttgtcactgtggggaatgtccagaccaccgtccaaagctccct 584 ||||||||||| || |||||||| ||||| |||||||| || ||||| ||||||| Sbjct: 46724 ccagcaaatcttttatcactgtgaggaatatccagacccccatccaaggctccct 46778 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 239 gccttcctctcctcgtaggtgagcttctt 267 |||||||||||||| |||||||||||||| Sbjct: 46107 gccttcctctcctcataggtgagcttctt 46135
>gb|BT014015.1| Lycopersicon esculentum clone 133077F, mRNA sequence Length = 1274 Score = 48.1 bits (24), Expect = 0.034 Identities = 39/44 (88%) Strand = Plus / Minus Query: 461 gcaacatgccctccatagatgtacttgcggtgaatctcagcatc 504 |||||||| || ||||| || ||||||||||||| ||||||||| Sbjct: 722 gcaacatggccaccatatatatacttgcggtgaacctcagcatc 679 Score = 46.1 bits (23), Expect = 0.13 Identities = 65/79 (82%) Strand = Plus / Minus Query: 525 tgaaaccagcaaatctcttgtcactgtggggaatgtccagaccaccgtccaaagctccct 584 |||| |||||||| ||||| |||| || ||||| || || ||||| ||||| || |||| Sbjct: 658 tgaatccagcaaacctcttctcaccatgaggaatatcaagtccaccatccaatgcaccct 599 Query: 585 taagtgcaccaaacacacg 603 | || |||||||||||||| Sbjct: 598 tgagagcaccaaacacacg 580
>emb|Z99296.2|SPAC3H5 S.pombe chromosome I cosmid c3H5 Length = 34284 Score = 48.1 bits (24), Expect = 0.034 Identities = 48/56 (85%) Strand = Plus / Minus Query: 451 catgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatcca 506 |||||| ||||||||||| || |||||||| || |||||| || ||||| |||||| Sbjct: 1285 catgtattcagcaacatggccaccatagatatatttgcggagagtctcatcatcca 1230
>ref|XM_780232.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein LOC580159 (LOC580159), mRNA Length = 1902 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Minus Query: 169 ctcgtcatcctcgtcatcgtcggc 192 |||||||||||||||||||||||| Sbjct: 1131 ctcgtcatcctcgtcatcgtcggc 1108 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 tcatcctcgtcatcgtcggc 192 |||||||||||||||||||| Sbjct: 1187 tcatcctcgtcatcgtcggc 1168
>emb|AL031528.1|SPBC11C11 S.pombe chromosome II cosmid c11C11 Length = 22500 Score = 48.1 bits (24), Expect = 0.034 Identities = 48/56 (85%) Strand = Plus / Plus Query: 451 catgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatcca 506 |||||| ||||||||||| || |||||||| ||||| ||| || ||||| |||||| Sbjct: 20215 catgtattcagcaacatgaccaccatagatatacttacggagagtctcatcatcca 20270
>ref|NM_001022319.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPBC11C11.09c), partial mRNA Length = 885 Score = 48.1 bits (24), Expect = 0.034 Identities = 48/56 (85%) Strand = Plus / Minus Query: 451 catgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatcca 506 |||||| ||||||||||| || |||||||| ||||| ||| || ||||| |||||| Sbjct: 624 catgtattcagcaacatgaccaccatagatatacttacggagagtctcatcatcca 569
>ref|NM_001019604.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC3H5.12c), partial mRNA Length = 885 Score = 48.1 bits (24), Expect = 0.034 Identities = 48/56 (85%) Strand = Plus / Minus Query: 451 catgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatcca 506 |||||| ||||||||||| || |||||||| || |||||| || ||||| |||||| Sbjct: 624 catgtattcagcaacatggccaccatagatatatttgcggagagtctcatcatcca 569
>gb|U48270.1|SPU48270 Schizosaccharomyces pombe ribosomal protein L5 gene, complete cds Length = 1238 Score = 48.1 bits (24), Expect = 0.034 Identities = 48/56 (85%) Strand = Plus / Minus Query: 451 catgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatcca 506 |||||| ||||||||||| || |||||||| || |||||| || ||||| |||||| Sbjct: 660 catgtattcagcaacatggccaccatagatatatttgcggagagtctcatcatcca 605
>dbj|AB016045.1| Schizosaccharomyces pombe mRNA for ribosomal protein L5 homolog, partial cds Length = 779 Score = 48.1 bits (24), Expect = 0.034 Identities = 48/56 (85%) Strand = Plus / Minus Query: 451 catgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatcca 506 |||||| ||||||||||| || |||||||| ||||| ||| || ||||| |||||| Sbjct: 486 catgtattcagcaacatgaccaccatagatatacttacggagagtctcatcatcca 431
>ref|XM_500389.1| Yarrowia lipolytica CLIB122, YALI0B01540g predicted mRNA Length = 210 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 168 actcgtcatcctcgtcatcgtcg 190 ||||||||||||||||||||||| Sbjct: 208 actcgtcatcctcgtcatcgtcg 186
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica Length = 3066374 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 168 actcgtcatcctcgtcatcgtcg 190 ||||||||||||||||||||||| Sbjct: 245151 actcgtcatcctcgtcatcgtcg 245173
>ref|XM_366233.1| Magnaporthe grisea 70-15 predicted protein (MG10452.4) partial mRNA Length = 738 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Minus Query: 173 tcatcctcgtcatcgtcggcggcaccagca 202 ||||| |||||||||||||||||| ||||| Sbjct: 452 tcatcgtcgtcatcgtcggcggcagcagca 423 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Minus Query: 173 tcatcctcgtcatcgtcggcggcaccagca 202 ||||| |||||||||||||||||| ||||| Sbjct: 383 tcatcgtcgtcatcgtcggcggcagcagca 354 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 179 tcgtcatcgtcggcggcaccagca 202 |||||||||||||||||| ||||| Sbjct: 653 tcgtcatcgtcggcggcagcagca 630
>dbj|AK221847.1| Arabidopsis thaliana mRNA for ribosomal protein, complete cds, clone: RAFL22-05-O03 Length = 517 Score = 44.1 bits (22), Expect = 0.53 Identities = 34/38 (89%) Strand = Plus / Minus Query: 389 ttcttgatgtactcactgaagtgagtttggtacttctc 426 ||||||||||| |||||||||||||||| ||||||| Sbjct: 114 ttcttgatgtaagcactgaagtgagtttgtaacttctc 77 Score = 42.1 bits (21), Expect = 2.1 Identities = 39/45 (86%) Strand = Plus / Minus Query: 241 cttcctctcctcgtaggtgagcttcttggggttgtacctcttgtg 285 ||||||||||||||| || || ||||| ||||||||||||||| Sbjct: 262 cttcctctcctcgtaagtaagtttcttcaagttgtacctcttgtg 218
>ref|XM_363564.1| Magnaporthe grisea 70-15 hypothetical protein (MG01490.4) partial mRNA Length = 873 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 174 catcctcgtcatcgtcggcgg 194 ||||||||||||||||||||| Sbjct: 261 catcctcgtcatcgtcggcgg 281
>gb|AC125291.3| Drosophila melanogaster X BAC CH221-17A11 (CHORI Sheared BAC Drosophila melanogaster library) complete sequence Length = 166613 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 170 tcgtcatcctcgtcatcgtcg 190 ||||||||||||||||||||| Sbjct: 150462 tcgtcatcctcgtcatcgtcg 150442
>emb|AJ296686.1|PAB296686 Picea abies ATC microsatellite DNA, clone EATC1A02 Length = 421 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 170 tcgtcatcctcgtcatcgtcg 190 ||||||||||||||||||||| Sbjct: 191 tcgtcatcctcgtcatcgtcg 211
>gb|AC146108.3| Pan troglodytes BAC clone RP43-22F10 from 7, complete sequence Length = 230349 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 232 gaggctggccttcctctcctc 252 ||||||||||||||||||||| Sbjct: 69373 gaggctggccttcctctcctc 69393
>gb|AC146056.2| Pan troglodytes BAC clone RP43-89N11 from 7, complete sequence Length = 154447 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 232 gaggctggccttcctctcctc 252 ||||||||||||||||||||| Sbjct: 112651 gaggctggccttcctctcctc 112671
>gb|AF513502.1| Homo sapiens STRA8 (STRA8) mRNA, complete cds Length = 993 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 232 gaggctggccttcctctcctc 252 ||||||||||||||||||||| Sbjct: 588 gaggctggccttcctctcctc 568
>emb|AJ890137.1| Murid Herpesvirus 2 r138 gene (partial), r139 gene, r140 gene, r141 gene and r142 gene (partial) Length = 7462 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 170 tcgtcatcctcgtcatcgtcg 190 ||||||||||||||||||||| Sbjct: 3340 tcgtcatcctcgtcatcgtcg 3360
>ref|NM_182489.1| Homo sapiens STRA8 (LOC346673), mRNA Length = 993 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 232 gaggctggccttcctctcctc 252 ||||||||||||||||||||| Sbjct: 588 gaggctggccttcctctcctc 568
>gb|AC023723.4| Drosophila melanogaster X BAC RP98-48E6 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179363 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 170 tcgtcatcctcgtcatcgtcg 190 ||||||||||||||||||||| Sbjct: 13719 tcgtcatcctcgtcatcgtcg 13699
>gb|AC023709.4| Drosophila melanogaster X BAC RP98-10I17 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 163710 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 170 tcgtcatcctcgtcatcgtcg 190 ||||||||||||||||||||| Sbjct: 111766 tcgtcatcctcgtcatcgtcg 111746
>gb|AF232689.2| Rat cytomegalovirus Maastricht, complete genome Length = 230138 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 170 tcgtcatcctcgtcatcgtcg 190 ||||||||||||||||||||| Sbjct: 190797 tcgtcatcctcgtcatcgtcg 190817
>ref|NM_132413.1| Drosophila melanogaster CG15295-RA (CG15295), mRNA Length = 2288 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 170 tcgtcatcctcgtcatcgtcg 190 ||||||||||||||||||||| Sbjct: 962 tcgtcatcctcgtcatcgtcg 942
>gb|AC009542.2|AC009542 Homo sapiens clone RP11-260N14 from 7q31, complete sequence Length = 160367 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 232 gaggctggccttcctctcctc 252 ||||||||||||||||||||| Sbjct: 92688 gaggctggccttcctctcctc 92668
>gb|AC009330.5|AC009330 Homo sapiens clone RP11-83M17 from 7q31, complete sequence Length = 174768 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 232 gaggctggccttcctctcctc 252 ||||||||||||||||||||| Sbjct: 89870 gaggctggccttcctctcctc 89850
>gb|AE003451.5| Drosophila melanogaster chromosome X, section 35 of 74 of the complete sequence Length = 285729 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 170 tcgtcatcctcgtcatcgtcg 190 ||||||||||||||||||||| Sbjct: 130980 tcgtcatcctcgtcatcgtcg 131000
>gb|AY664418.1| Zea mays cultivar Mo17 locus 9008, complete sequence Length = 282600 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 170 tcgtcatcctcgtcatcgtcg 190 ||||||||||||||||||||| Sbjct: 115897 tcgtcatcctcgtcatcgtcg 115917
>gb|AY664414.1| Zea mays cultivar B73 locus 9008, complete sequence Length = 339089 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 170 tcgtcatcctcgtcatcgtcg 190 ||||||||||||||||||||| Sbjct: 129620 tcgtcatcctcgtcatcgtcg 129640
>dbj|AK115905.1| Ciona intestinalis cDNA, clone:cilv039f09, full insert sequence Length = 1057 Score = 42.1 bits (21), Expect = 2.1 Identities = 39/45 (86%) Strand = Plus / Minus Query: 550 gtggggaatgtccagaccaccgtccaaagctcccttaagtgcacc 594 |||||||||||| ||||||||||| ||||||||| | |||||| Sbjct: 576 gtggggaatgtcgagaccaccgtcagcagctcccttcattgcacc 532
>gb|M60100.1|HRSMHDRA E.caballus MHC class II DR alpha chain (A2 haplotype) gene, 3' end Length = 2006 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 ttcccttcttgatgtactcac 404 ||||||||||||||||||||| Sbjct: 906 ttcccttcttgatgtactcac 926
>ref|NM_180473.1| Arabidopsis thaliana unknown protein AT5G10710 transcript variant AT5G10710.2 mRNA, complete cds Length = 1170 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 gacagaaaggaacaggtccg 92 |||||||||||||||||||| Sbjct: 677 gacagaaaggaacaggtccg 696
>ref|NM_121109.2| Arabidopsis thaliana unknown protein AT5G10710 transcript variant AT5G10710.1 mRNA, complete cds Length = 1270 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 gacagaaaggaacaggtccg 92 |||||||||||||||||||| Sbjct: 777 gacagaaaggaacaggtccg 796
>ref|XM_467072.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1424 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 363 cttccatgtcatcagctgag 382 |||||||||||||||||||| Sbjct: 386 cttccatgtcatcagctgag 367
>gb|AC113006.9| Mus musculus chromosome 16, clone RP23-332O12, complete sequence Length = 195941 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 371 tcatcagctgagattccctt 390 |||||||||||||||||||| Sbjct: 107257 tcatcagctgagattccctt 107276
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 cctcgtcatcgtcggcggca 196 |||||||||||||||||||| Sbjct: 302688 cctcgtcatcgtcggcggca 302669
>ref|XM_754221.1| Ustilago maydis 521 hypothetical protein (UM03167.1) partial mRNA Length = 2610 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 tcgtcatcctcgtcatcgtc 189 |||||||||||||||||||| Sbjct: 1748 tcgtcatcctcgtcatcgtc 1729
>ref|XM_754531.1| Ustilago maydis 521 hypothetical protein (UM03477.1) partial mRNA Length = 3900 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 tcgtcatcctcgtcatcgtc 189 |||||||||||||||||||| Sbjct: 1019 tcgtcatcctcgtcatcgtc 1000
>ref|XM_380961.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG00785.1) partial mRNA Length = 600 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 tcgtcatcctcgtcatcgtc 189 |||||||||||||||||||| Sbjct: 593 tcgtcatcctcgtcatcgtc 574
>gb|AF315713.1| Malus x domestica 3-hydroxy-3-methylglutaryl coenzyme A reductase mRNA, partial cds Length = 1767 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 tcctcgtcatcgtcggcggc 195 |||||||||||||||||||| Sbjct: 323 tcctcgtcatcgtcggcggc 304
>emb|Z49967.1|CEF54C9 Caenorhabditis elegans Cosmid F54C9, complete sequence Length = 34842 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 450 tcatgtagtcagcaacatgc 469 |||||||||||||||||||| Sbjct: 16526 tcatgtagtcagcaacatgc 16507
>gb|AC161114.4| Mus musculus BAC clone RP24-338A5 from chromosome 12, complete sequence Length = 220746 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 gttgagggcgttgagcctct 227 |||||||||||||||||||| Sbjct: 125822 gttgagggcgttgagcctct 125841
>gb|AF360281.1| Arabidopsis thaliana unknown protein (At5g10710) mRNA, complete cds Length = 1285 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 gacagaaaggaacaggtccg 92 |||||||||||||||||||| Sbjct: 776 gacagaaaggaacaggtccg 795
>gb|AC164004.3| Mus musculus chromosome 5, clone RP23-58C20, complete sequence Length = 198872 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 aagacagaaaggaacaggtc 90 |||||||||||||||||||| Sbjct: 112990 aagacagaaaggaacaggtc 112971
>gb|BC037840.2| Homo sapiens potassium inwardly-rectifying channel, subfamily J, member 10, mRNA (cDNA clone IMAGE:4814643) Length = 1531 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 303 tggttgatttggccatgcta 322 |||||||||||||||||||| Sbjct: 447 tggttgatttggccatgcta 466
>gb|AY043490.1| Malus x domestica 3-hydroxy-3-methylglutaryl coenzyme A reductase (hmg1) mRNA, complete cds Length = 1827 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 tcctcgtcatcgtcggcggc 195 |||||||||||||||||||| Sbjct: 383 tcctcgtcatcgtcggcggc 364
>gb|BC047625.1| Homo sapiens cDNA clone IMAGE:4795909 Length = 2187 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 340 agcgtgaaccttcttgtaaactgc 363 |||||||||||| ||||||||||| Sbjct: 1284 agcgtgaaccttattgtaaactgc 1307
>gb|BC036587.2| Homo sapiens cDNA clone IMAGE:4799072 Length = 2187 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 340 agcgtgaaccttcttgtaaactgc 363 |||||||||||| ||||||||||| Sbjct: 1284 agcgtgaaccttattgtaaactgc 1307
>gb|BC034036.1| Homo sapiens potassium inwardly-rectifying channel, subfamily J, member 10, mRNA (cDNA clone IMAGE:4811633), partial cds Length = 4424 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 303 tggttgatttggccatgcta 322 |||||||||||||||||||| Sbjct: 3333 tggttgatttggccatgcta 3352
>gb|AC100771.2| Homo sapiens chromosome 11, clone RP11-159H22, complete sequence Length = 177819 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 340 agcgtgaaccttcttgtaaactgc 363 ||||||||||||||||| |||||| Sbjct: 96341 agcgtgaaccttcttgtgaactgc 96318
>dbj|AB035927.1| Oryza sativa (japonica cultivar-group) GDH3 mRNA for glutamate dehydrogenase 3, complete cds Length = 1452 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 363 cttccatgtcatcagctgag 382 |||||||||||||||||||| Sbjct: 412 cttccatgtcatcagctgag 393
>gb|AC026427.4| Homo sapiens chromosome 5 clone CTD-2193P3, complete sequence Length = 175838 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 caagatacccaagacagaaa 80 |||||||||||||||||||| Sbjct: 53284 caagatacccaagacagaaa 53303
>gb|AY039230.1| Malus x domestica 3-hydroxy-3-methylglutaryl coenzyme A reductase (hmgr) mRNA, complete cds Length = 2301 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 tcctcgtcatcgtcggcggc 195 |||||||||||||||||||| Sbjct: 536 tcctcgtcatcgtcggcggc 517
>gb|AC020901.8|AC020901 Homo sapiens chromosome 5 clone CTC-527N11, complete sequence Length = 180636 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 caagatacccaagacagaaa 80 |||||||||||||||||||| Sbjct: 161539 caagatacccaagacagaaa 161558
>ref|NM_063410.2| Caenorhabditis elegans Ribosomal Protein, Large subunit family member (rpl-5) (rpl-5) mRNA, complete cds Length = 969 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 450 tcatgtagtcagcaacatgc 469 |||||||||||||||||||| Sbjct: 630 tcatgtagtcagcaacatgc 611
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 168 actcgtcatcctcgtcatcgtcggcggc 195 ||||||| |||||||| ||||||||||| Sbjct: 24219624 actcgtcctcctcgtcgtcgtcggcggc 24219597
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 363 cttccatgtcatcagctgag 382 |||||||||||||||||||| Sbjct: 26259382 cttccatgtcatcagctgag 26259363
>gb|DQ022844.1| Oryza sativa (japonica cultivar-group) cytochrome P450 mRNA, complete cds Length = 1719 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 168 actcgtcatcctcgtcatcgtcggcggc 195 ||||||| |||||||| ||||||||||| Sbjct: 549 actcgtcctcctcgtcgtcgtcggcggc 576
>emb|BX830763.1|CNS09ZHR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS20ZF05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1195 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 gacagaaaggaacaggtccg 92 |||||||||||||||||||| Sbjct: 734 gacagaaaggaacaggtccg 753
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 169 ctcgtcatcctcgtcatcgtcggcggca 196 |||||| || |||||||||||||||||| Sbjct: 2243576 ctcgtcttcatcgtcatcgtcggcggca 2243603
>gb|BT002314.1| Arabidopsis thaliana clone C104667 unknown protein (At5g10710) mRNA, complete cds Length = 970 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 gacagaaaggaacaggtccg 92 |||||||||||||||||||| Sbjct: 577 gacagaaaggaacaggtccg 596
>dbj|BA000002.2| Aeropyrum pernix K1 DNA, complete genome Length = 1669695 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 gagggcgttgagcctctcga 230 |||||||||||||||||||| Sbjct: 433386 gagggcgttgagcctctcga 433367
>dbj|AP007203.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0012J10 Length = 132375 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 363 cttccatgtcatcagctgag 382 |||||||||||||||||||| Sbjct: 82223 cttccatgtcatcagctgag 82204
>gb|AE005004.1| Halobacterium sp. NRC-1 section 35 of 170 of the complete genome Length = 11030 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 tcctcgtcatcgtcggcggc 195 |||||||||||||||||||| Sbjct: 5096 tcctcgtcatcgtcggcggc 5077
>dbj|AB125365.1| Corvus macrorhynchos DRD4 gene for dopamine receptor D4, exon 1, partial cds Length = 182 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 173 tcatcctcgtcatcgtcggcggca 196 |||||||| ||||||||||||||| Sbjct: 61 tcatcctcctcatcgtcggcggca 84
>dbj|AK121238.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023096A02, full insert sequence Length = 1698 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 168 actcgtcatcctcgtcatcgtcggcggc 195 ||||||| |||||||| ||||||||||| Sbjct: 543 actcgtcctcctcgtcgtcgtcggcggc 570
>dbj|AK103028.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033117C02, full insert sequence Length = 1424 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 363 cttccatgtcatcagctgag 382 |||||||||||||||||||| Sbjct: 386 cttccatgtcatcagctgag 367
>gb|AC102476.14| Mus musculus chromosome 5, clone RP24-396L12, complete sequence Length = 181047 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 aagacagaaaggaacaggtc 90 |||||||||||||||||||| Sbjct: 168314 aagacagaaaggaacaggtc 168333
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 168 actcgtcatcctcgtcatcgtcggcggc 195 ||||||| |||||||| ||||||||||| Sbjct: 24147830 actcgtcctcctcgtcgtcgtcggcggc 24147803
>emb|AL772426.5|CNS08CA4 Oryza sativa chromosome 12, . BAC OJ1310_C03 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132733 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 168 actcgtcatcctcgtcatcgtcggcggc 195 ||||||| |||||||| ||||||||||| Sbjct: 104315 actcgtcctcctcgtcgtcgtcggcggc 104288
>emb|AL139194.7|CNS01DXB Human chromosome 14 DNA sequence BAC C-2190G12 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 157120 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 340 agcgtgaaccttcttgtaaactgc 363 |||||||||||| ||||||||||| Sbjct: 41652 agcgtgaaccttattgtaaactgc 41675 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,695,720 Number of Sequences: 3902068 Number of extensions: 4695720 Number of successful extensions: 86114 Number of sequences better than 10.0: 109 Number of HSP's better than 10.0 without gapping: 109 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 85616 Number of HSP's gapped (non-prelim): 476 length of query: 605 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 582 effective length of database: 17,143,297,704 effective search space: 9977399263728 effective search space used: 9977399263728 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
