>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 72/85 (84%)
 Strand = Plus / Minus

                                                                            
Query: 546      ttcattcctcgataatgctgttcttcgcagcagctgatgcatttcgctgcacttgattct 605
                |||||||||| ||  |||| || || |||||||| ||||||||||||||||  ||| |||
Sbjct: 23101396 ttcattcctcaatgctgctattttttgcagcagcggatgcatttcgctgcatctgagtct 23101337

                                         
Query: 606      ggacagcgtacttcctttgcagctc 630
                |||||  ||||| ||||||||||||
Sbjct: 23101336 ggacattgtactgcctttgcagctc 23101312

>dbj|AK100149.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023015A14, full
           insert sequence
          Length = 1408

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 72/85 (84%)
 Strand = Plus / Minus

                                                                       
Query: 546 ttcattcctcgataatgctgttcttcgcagcagctgatgcatttcgctgcacttgattct 605
           |||||||||| ||  |||| || || |||||||| ||||||||||||||||  ||| |||
Sbjct: 728 ttcattcctcaatgctgctattttttgcagcagcggatgcatttcgctgcatctgagtct 669

                                    
Query: 606 ggacagcgtacttcctttgcagctc 630
           |||||  ||||| ||||||||||||
Sbjct: 668 ggacattgtactgcctttgcagctc 644

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 72/85 (84%)
 Strand = Plus / Minus

                                                                            
Query: 546      ttcattcctcgataatgctgttcttcgcagcagctgatgcatttcgctgcacttgattct 605
                |||||||||| ||  |||| || || |||||||| ||||||||||||||||  ||| |||
Sbjct: 23029587 ttcattcctcaatgctgctattttttgcagcagcggatgcatttcgctgcatctgagtct 23029528

                                         
Query: 606      ggacagcgtacttcctttgcagctc 630
                |||||  ||||| ||||||||||||
Sbjct: 23029527 ggacattgtactgcctttgcagctc 23029503

>emb|AL928753.3|CNS08CBQ Oryza sativa chromosome 12, . BAC OSJNBb0076G11 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 135323

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 72/85 (84%)
 Strand = Plus / Plus

                                                                         
Query: 546   ttcattcctcgataatgctgttcttcgcagcagctgatgcatttcgctgcacttgattct 605
             |||||||||| ||  |||| || || |||||||| ||||||||||||||||  ||| |||
Sbjct: 77001 ttcattcctcaatgctgctattttttgcagcagcggatgcatttcgctgcatctgagtct 77060

                                      
Query: 606   ggacagcgtacttcctttgcagctc 630
             |||||  ||||| ||||||||||||
Sbjct: 77061 ggacattgtactgcctttgcagctc 77085

>gb|DQ336395.1| Dictyostelium citrinum mitochondrion, complete genome
          Length = 58598

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 22    aaaagtaatagaagtagaagaagca 46
             ||||||||||| |||||||||||||
Sbjct: 42262 aaaagtaatagcagtagaagaagca 42238

>gb|AC110250.16| Mus musculus chromosome 1, clone RP23-260K6, complete sequence
          Length = 219359

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 178   gtttacaatttgtcatcagaacaatcta 205
             ||||||||||||||||  ||||||||||
Sbjct: 27793 gtttacaatttgtcatatgaacaatcta 27820

>gb|AC161537.7| Mus musculus chromosome 15, clone RP23-471J11, complete sequence
          Length = 188471

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 203   ctacacagaaacaccatcctcttc 226
             ||||||| ||||||||||||||||
Sbjct: 82556 ctacacacaaacaccatcctcttc 82579

>ref|XM_818111.1| Trypanosoma brucei TREU927 mitochondrial intermediate peptidase
            (Tb10.6k15.0490) partial mRNA; nuclear gene for
            mitochondrial product
          Length = 2028

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 347  tgcggttggaggaagtgcag 366
            ||||||||||||||||||||
Sbjct: 998  tgcggttggaggaagtgcag 1017

>emb|CT010515.8| M.truncatula DNA sequence from clone MTH2-146B21 on chromosome 3,
             complete sequence
          Length = 130617

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 151   acaaggttcttgatgatttggcca 174
             ||||| ||||||||||||||||||
Sbjct: 73739 acaagattcttgatgatttggcca 73762

>gb|AC099648.5| Homo sapiens BAC clone RP11-589K15 from 7, complete sequence
          Length = 69926

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 145   aatcttacaaggttcttgatgatttggc 172
             |||||| |||| ||||||||||||||||
Sbjct: 45195 aatctttcaagtttcttgatgatttggc 45168

>gb|AC120138.9| Mus musculus chromosome 1, clone RP23-283D3, complete sequence
          Length = 216381

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 178   gtttacaatttgtcatcagaacaatcta 205
             ||||||||||||||||  ||||||||||
Sbjct: 32137 gtttacaatttgtcatatgaacaatcta 32110

>gb|AC144725.16| Medicago truncatula clone mth2-7m17, complete sequence
          Length = 130213

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 151    acaaggttcttgatgatttggcca 174
              ||||| ||||||||||||||||||
Sbjct: 112157 acaagattcttgatgatttggcca 112180

>gb|AC151725.26| Medicago truncatula clone mth2-164l16, complete sequence
          Length = 115069

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 151  acaaggttcttgatgatttggcca 174
            ||||| ||||||||||||||||||
Sbjct: 5788 acaagattcttgatgatttggcca 5811

>gb|AC148177.13| Medicago truncatula clone mth2-4c9, complete sequence
          Length = 117329

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 151   acaaggttcttgatgatttggcca 174
             ||||| ||||||||||||||||||
Sbjct: 28492 acaagattcttgatgatttggcca 28469

>emb|AL590636.12| Human DNA sequence from clone RP11-50E19 on chromosome 10 Contains
            the 3' end of the ITGA8 gene for integrin alpha 8,
            complete sequence
          Length = 141790

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 31   agaagtagaagaagcacagt 50
            ||||||||||||||||||||
Sbjct: 9903 agaagtagaagaagcacagt 9922

>emb|AL356059.27| Human DNA sequence from clone RP11-192G4 on chromosome 1 Contains part
             of the COL24A1 gene for collagen type XXIV alpha 1,
             complete sequence
          Length = 76418

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 8     tttttcttactaataaaagtaata 31
             ||||||||| ||||||||||||||
Sbjct: 19754 tttttcttaataataaaagtaata 19731

>gb|AC091078.7| Homo sapiens, clone RP11-164C12, complete sequence
          Length = 182776

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 92     aaatatgaaaaatctgaaga 111
              ||||||||||||||||||||
Sbjct: 179809 aaatatgaaaaatctgaaga 179790

>gb|DQ334724.2| Brassica rapa subsp. chinensis los (los) mRNA, complete cds
          Length = 1666

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 217  catcctcttcgcgtcacaaa 236
            ||||||||||||||||||||
Sbjct: 1467 catcctcttcgcgtcacaaa 1448

>gb|AC135464.13| Medicago truncatula clone mth2-17k21, complete sequence
          Length = 105376

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 151 acaaggttcttgatgatttggcca 174
           ||||| ||||||||||||||||||
Sbjct: 580 acaagattcttgatgatttggcca 557

>gb|AC130802.36| Medicago truncatula clone mth2-28b21, complete sequence
          Length = 123626

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 151    acaaggttcttgatgatttggcca 174
              ||||| ||||||||||||||||||
Sbjct: 101915 acaagattcttgatgatttggcca 101938

>gb|AC139313.11| Medicago truncatula clone mth2-18l7, complete sequence
          Length = 91156

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 151   acaaggttcttgatgatttggcca 174
             ||||| ||||||||||||||||||
Sbjct: 68527 acaagattcttgatgatttggcca 68550

>gb|AC110023.3| Homo sapiens chromosome 15, clone RP11-739G5, complete sequence
          Length = 166975

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 92    aaatatgaaaaatctgaaga 111
             ||||||||||||||||||||
Sbjct: 21122 aaatatgaaaaatctgaaga 21103

>gb|AC080188.6| Homo sapiens BAC clone RP11-635L1 from 4, complete sequence
          Length = 186670

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 19    aataaaagtaatagaagtagaaga 42
             ||||||||||||||||| ||||||
Sbjct: 90962 aataaaagtaatagaaggagaaga 90985

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 16      actaataaaagtaatagaagtaga 39
               |||||||||||||||| |||||||
Sbjct: 3292858 actaataaaagtaataaaagtaga 3292881

>gb|AC153912.8| Mus musculus 10 BAC RP23-331E5 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 206168

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 92    aaatatgaaaaatctgaagagcggaaga 119
             |||||||||||||| ||| |||||||||
Sbjct: 91447 aaatatgaaaaatcagaaaagcggaaga 91420

>gb|AY307448.1| Brassica rapa enolase mRNA, complete cds
          Length = 1580

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 217  catcctcttcgcgtcacaaa 236
            ||||||||||||||||||||
Sbjct: 1408 catcctcttcgcgtcacaaa 1389

>gb|AC154252.1| Mus musculus BAC clone RP24-197M20 from chromosome 13, complete sequence
          Length = 176702

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 25     agtaatagaagtagaagaag 44
              ||||||||||||||||||||
Sbjct: 105066 agtaatagaagtagaagaag 105085

>emb|BX088579.5| Zebrafish DNA sequence from clone CH211-198C19 in linkage group 16,
             complete sequence
          Length = 214474

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 560   atgctgttcttcgcagcagctgat 583
             ||||||||||| ||||||||||||
Sbjct: 67561 atgctgttctttgcagcagctgat 67538

>emb|AL954130.8| Zebrafish DNA sequence from clone CH211-214D1 in linkage group 16,
             complete sequence
          Length = 235236

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 560   atgctgttcttcgcagcagctgat 583
             ||||||||||| ||||||||||||
Sbjct: 46500 atgctgttctttgcagcagctgat 46477

>dbj|AP003847.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1714_H10
          Length = 191580

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 16     actaataaaagtaatagaagtaga 39
              |||||||||||||||| |||||||
Sbjct: 102551 actaataaaagtaataaaagtaga 102574

>gb|AC007228.1|AC007228 Homo sapiens chromosome 19, BAC 37295 (CIT-B-21A4), complete sequence
          Length = 130067

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 353   tggaggaagtgcaggcatat 372
             ||||||||||||||||||||
Sbjct: 23959 tggaggaagtgcaggcatat 23978


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,426,258
Number of Sequences: 3902068
Number of extensions: 6426258
Number of successful extensions: 109004
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 108879
Number of HSP's gapped (non-prelim): 125
length of query: 633
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 610
effective length of database: 17,143,297,704
effective search space: 10457411599440
effective search space used: 10457411599440
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)