ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags29n03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.14
2dbj|AP005707.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.14
3gb|AC158676.12| Mus musculus 6 BAC RP23-146N13 (Roswell Park Can... 44 0.57
4gb|AC007942.16|AC007942 Mus musculus chromosome , clone CT7-56G4... 44 0.57
5gb|AY316747.1| Rhizobium sp. NGR234 megaplasmid 2 contig 1, comp... 42 2.2
6gb|AC024651.13| Homo sapiens chromosome 15, clone RP11-753A21, c... 42 2.2
7gb|AF121782.1| Homo sapiens chromosome 21q22.3 PAC 206A10, compl... 40 8.8
8gb|AC124981.25| Mus musculus chromosome 5, clone RP24-170P20, co... 40 8.8
9gb|AF030001.1|MMMHC29N7 Mus musculus major histocompatibility lo... 40 8.8
10gb|AC155846.18| Mus musculus 6 BAC RP24-218D17 (Roswell Park Can... 40 8.8
11gb|AC157218.13| Mus musculus 6 BAC RP24-200A9 (Roswell Park Canc... 40 8.8
12gb|AC009403.5| Homo sapiens PAC clone RP5-1015O24 from 7, comple... 40 8.8
13gb|AC147343.2| Pan troglodytes BAC clone CH251-14P15 from Y, com... 40 8.8
14gb|AC147148.2| Pan troglodytes BAC clone CH251-267E22 from Y, co... 40 8.8
15gb|AC147117.2| Pan troglodytes BAC clone CH251-532B3 from Y, com... 40 8.8
16gb|AC122374.4| Mus musculus BAC clone RP23-468F24 from chromosom... 40 8.8
17emb|AL163280.2|HS21C080 Homo sapiens chromosome 21 segment HS21C080 40 8.8
18emb|AL136097.10| Human DNA sequence from clone RP11-62C3 on chro... 40 8.8
19emb|AL121875.10|HSBA51C14 Human DNA sequence from clone RP11-51C... 40 8.8
20gb|AY145471.1| Rachiplusia ou multiple nucleopolyhedrovirus, com... 40 8.8
21emb|AL663107.13| Mouse DNA sequence from clone RP23-465K20 on ch... 40 8.8
22emb|AJ438610.1|AGA438610 Anopheles gambiae DNA from chromosome 2... 40 8.8
23gb|AC108485.2| Homo sapiens chromosome 3 clone RP11-809D17, comp... 40 8.8
24dbj|BS000667.1| Pan troglodytes chromosome Y clone:PTBY-009K22, ... 40 8.8
25gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence 40 8.8
26dbj|AB010266.1| Mus musculus Creb-rp, Tnx and Cyp21 genes for cA... 40 8.8
27gb|AC073607.19| Homo sapiens 12 BAC RP11-462G20 (Roswell Park Ca... 40 8.8
28emb|BX470097.9| Zebrafish DNA sequence from clone DKEYP-114E10 i... 40 8.8
29gb|AC061961.6| Homo sapiens chromosome 2, clone RP11-754B23, com... 40 8.8
30gb|AC022161.8| Homo sapiens chromosome 16 clone RP11-273P11, com... 40 8.8
31gb|AC004129.2| Homo sapiens BAC clone CTB-136N17 from 7, complet... 40 8.8
32gb|BC050878.1| Mus musculus, clone IMAGE:6512811, mRNA 40 8.8
33dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
34gb|AC009102.10| Homo sapiens chromosome 16 clone RP11-441F2, com... 40 8.8
35gb|AC104091.4| Homo sapiens BAC clone RP11-1173K8 from 2, comple... 40 8.8
36gb|AC079411.6| Homo sapiens chromosome 16 clone CTD-2050B12, com... 40 8.8
37gb|AC079602.15| Homo sapiens 12 BAC RP11-216P16 (Roswell Park Ca... 40 8.8
38gb|AC006369.3| Homo sapiens BAC clone RP11-278G12 from 2, comple... 40 8.8
39ref|XM_233365.3| PREDICTED: Rattus norvegicus similar to hypothe... 40 8.8
40dbj|AP002094.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
41dbj|BS000222.1| Pan troglodytes chromosome 22 clone:RP43-111J12,... 40 8.8
42dbj|AK073330.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.8
43emb|AJ239322.3|HS156L9 Homo sapiens sequence from PAC RPCI-1 156... 40 8.8
44dbj|AP001700.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 8.8
45gb|AC006289.1|AC006289 Mus musculus chromosome 17, clone 29_N_7,... 40 8.8
46dbj|AP001998.4| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 8.8
47gb|AC167333.3| Mus musculus BAC clone RP23-92L4 from chromosome ... 40 8.8
48emb|CT573030.2| Mouse DNA sequence from clone RP24-100B3 on chro... 40 8.8
49gb|U09822.1|HSU09822 Human cosmid clone 26h7 from Xq27.2-q27.3 40 8.8
50emb|AJ006996.1|HSG1150 Homo sapiens chromosome 21 PAC LLNLP704G1... 40 8.8 
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                       
Query: 516      caagcttagcattttcaccatca 538
                |||||||||||||||||||||||
Sbjct: 14395182 caagcttagcattttcaccatca 14395160
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>dbj|AP005707.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0465E03
          Length = 151206

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 516   caagcttagcattttcaccatca 538
             |||||||||||||||||||||||
Sbjct: 86985 caagcttagcattttcaccatca 86963
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>gb|AC158676.12| Mus musculus 6 BAC RP23-146N13 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 204560

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 74     ctctcctcttggtggcaaaatggctg 99
              |||| |||||||||||||||||||||
Sbjct: 105729 ctctgctcttggtggcaaaatggctg 105754
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>gb|AC007942.16|AC007942 Mus musculus chromosome , clone CT7-56G4, complete sequence
          Length = 122955

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 74    ctctcctcttggtggcaaaatggctg 99
             |||| |||||||||||||||||||||
Sbjct: 71100 ctctgctcttggtggcaaaatggctg 71125
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>gb|AY316747.1| Rhizobium sp. NGR234 megaplasmid 2 contig 1, complete sequence
          Length = 357655

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 66     gtttcattctctcctcttggt 86
              |||||||||||||||||||||
Sbjct: 198540 gtttcattctctcctcttggt 198520
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>gb|AC024651.13| Homo sapiens chromosome 15, clone RP11-753A21, complete sequence
          Length = 212185

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 511    ttctccaagcttagcattttc 531
              |||||||||||||||||||||
Sbjct: 162273 ttctccaagcttagcattttc 162253
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>gb|AF121782.1| Homo sapiens chromosome 21q22.3 PAC 206A10, complete sequence
          Length = 142742

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 41    atttgcataaagtctacagt 60
             ||||||||||||||||||||
Sbjct: 54590 atttgcataaagtctacagt 54571
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>gb|AC124981.25| Mus musculus chromosome 5, clone RP24-170P20, complete sequence
          Length = 153767

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 548   tcagtgctcagcacctctgg 567
             ||||||||||||||||||||
Sbjct: 68985 tcagtgctcagcacctctgg 69004
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>gb|AF030001.1|MMMHC29N7 Mus musculus major histocompatibility locus class III
              region:butyrophilin-like protein gene, partial cds; Notch4,
              PBX2, RAGE, lysophatidic acid acyl transferase-alpha,
              palmitoyl-protein thioesterase 2 (PPT2), CREB-RP, and
              tenascin X (TNX) genes, complete cds; and CYP21OHB
              pseudogene, complete sequence
          Length = 201964

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 88     gcaaaatggctgatcccaac 107
              ||||||||||||||||||||
Sbjct: 161707 gcaaaatggctgatcccaac 161726
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>gb|AC155846.18| Mus musculus 6 BAC RP24-218D17 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 184853

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 66     gtttcattctctcctcttgg 85
              ||||||||||||||||||||
Sbjct: 145602 gtttcattctctcctcttgg 145621
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>gb|AC157218.13| Mus musculus 6 BAC RP24-200A9 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 173704

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 66    gtttcattctctcctcttgg 85
             ||||||||||||||||||||
Sbjct: 28299 gtttcattctctcctcttgg 28318
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>gb|AC009403.5| Homo sapiens PAC clone RP5-1015O24 from 7, complete sequence
          Length = 168418

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 586   agctgaggcatcagattctt 605
             ||||||||||||||||||||
Sbjct: 51009 agctgaggcatcagattctt 50990
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>gb|AC147343.2| Pan troglodytes BAC clone CH251-14P15 from Y, complete sequence
          Length = 277007

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 142   tctgcttccatttatgcaca 161
             ||||||||||||||||||||
Sbjct: 24947 tctgcttccatttatgcaca 24928
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>gb|AC147148.2| Pan troglodytes BAC clone CH251-267E22 from Y, complete sequence
          Length = 151370

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 142   tctgcttccatttatgcaca 161
             ||||||||||||||||||||
Sbjct: 57405 tctgcttccatttatgcaca 57424
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>gb|AC147117.2| Pan troglodytes BAC clone CH251-532B3 from Y, complete sequence
          Length = 207020

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 142    tctgcttccatttatgcaca 161
              ||||||||||||||||||||
Sbjct: 155793 tctgcttccatttatgcaca 155812
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>gb|AC122374.4| Mus musculus BAC clone RP23-468F24 from chromosome 6, complete sequence
          Length = 195113

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 46    cataaagtctacagtactta 65
             ||||||||||||||||||||
Sbjct: 49321 cataaagtctacagtactta 49302
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>emb|AL163280.2|HS21C080 Homo sapiens chromosome 21 segment HS21C080
          Length = 340000

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 41     atttgcataaagtctacagt 60
              ||||||||||||||||||||
Sbjct: 278770 atttgcataaagtctacagt 278751
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>emb|AL136097.10| Human DNA sequence from clone RP11-62C3 on chromosome 9q22.1-22.33
              Contains a novel pseudogene, a novel gene, the IARS gene
              for isoleucine-tRNA synthetase, the  gene for a novel
              protein (FLJ20736), the 5' end of a novel gene, a UPF0183
              protein pseudogene, the NOL8 gene for nucleolar protein 8
              and three CpG islands, complete sequence
          Length = 193488

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 63     ttagtttcattctctcctct 82
              ||||||||||||||||||||
Sbjct: 137950 ttagtttcattctctcctct 137931
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>emb|AL121875.10|HSBA51C14 Human DNA sequence from clone RP11-51C14 on chromosome Xq26.2-27.3
             Contains an embryonic ectoderm development (EED)
             pseudogene, a ribosomal protein S17 (RPS17) pseudogene,
             the SOX3 gene for SRY (sex determining region Y)-box 3 and
             three CpG islands, complete sequence
          Length = 148598

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 311   tcaggagcagcttcagtgtt 330
             ||||||||||||||||||||
Sbjct: 49641 tcaggagcagcttcagtgtt 49660
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>gb|AY145471.1| Rachiplusia ou multiple nucleopolyhedrovirus, complete genome
          Length = 131526

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 160   cactaactactttccatcat 179
             ||||||||||||||||||||
Sbjct: 91969 cactaactactttccatcat 91988
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>emb|AL663107.13| Mouse DNA sequence from clone RP23-465K20 on chromosome 11 Contains a
              novel gene (2210415F13Rik), an NADH dehydrogenase
              (ubiquinone) Fe-S protein 3 (Ndufs3) pseudogene, a novel
              pseudogene, a novel gene (1810065E05Rik), a novel gene
              similar to rat solute carrier family 11 member 1 (Slc11a1),
              a novel gene, the  Olfr30 gene for olfactory receptor 30,
              an olfactory receptor (MOR284-1P) pseudogene, the gene for
              olfactory receptor MOR284-2 (LOC216774),  a novel gene
              similar to MOR275 (LOC193140), a ribosomal protein L24
              (Rpl24) pseudogene, the gene for olfactory receptor
              MOR275-1, a DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 (Ddx5)
              pseudogene, an olfactory receptor (MOR275-3) pseudogene and
              a CpG island, complete sequence
          Length = 191700

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 576    tagcagcagcagctgaggca 595
              ||||||||||||||||||||
Sbjct: 122428 tagcagcagcagctgaggca 122409
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>emb|AJ438610.1|AGA438610 Anopheles gambiae DNA from chromosome 2R, BAC clone 4F11
          Length = 129642

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 601   ttcttctggttctatggtca 620
             ||||||||||||||||||||
Sbjct: 10115 ttcttctggttctatggtca 10096
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>gb|AC108485.2| Homo sapiens chromosome 3 clone RP11-809D17, complete sequence
          Length = 166284

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 36     acaacatttgcataaagtctacag 59
              |||||||||| |||||||||||||
Sbjct: 128087 acaacatttgtataaagtctacag 128064
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>dbj|BS000667.1| Pan troglodytes chromosome Y clone:PTBY-009K22, complete sequences
          Length = 118085

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 142   tctgcttccatttatgcaca 161
             ||||||||||||||||||||
Sbjct: 50279 tctgcttccatttatgcaca 50298
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>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 142   tctgcttccatttatgcaca 161
             ||||||||||||||||||||
Sbjct: 93966 tctgcttccatttatgcaca 93947
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>dbj|AB010266.1| Mus musculus Creb-rp, Tnx and Cyp21 genes for cAMP response element
             binding protein-related protein, tenascin-X and steroid
             21-hydroxylase, partial cds and complete sequences
          Length = 67977

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 88    gcaaaatggctgatcccaac 107
             ||||||||||||||||||||
Sbjct: 30791 gcaaaatggctgatcccaac 30810
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>gb|AC073607.19| Homo sapiens 12 BAC RP11-462G20 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 165085

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 53    tctacagtacttagtttcat 72
             ||||||||||||||||||||
Sbjct: 90559 tctacagtacttagtttcat 90578
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>emb|BX470097.9| Zebrafish DNA sequence from clone DKEYP-114E10 in linkage group 5,
            complete sequence
          Length = 96967

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 158  cacactaactactttccatc 177
            ||||||||||||||||||||
Sbjct: 2025 cacactaactactttccatc 2006
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>gb|AC061961.6| Homo sapiens chromosome 2, clone RP11-754B23, complete sequence
          Length = 91734

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 532   accatcaggtgctggttcag 551
             ||||||||||||||||||||
Sbjct: 50008 accatcaggtgctggttcag 50027
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>gb|AC022161.8| Homo sapiens chromosome 16 clone RP11-273P11, complete sequence
          Length = 181541

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 587   gctgaggcatcagattcttctggttcta 614
             |||||||||||| ||||||| |||||||
Sbjct: 44086 gctgaggcatcacattcttcaggttcta 44113
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>gb|AC004129.2| Homo sapiens BAC clone CTB-136N17 from 7, complete sequence
          Length = 162701

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 69     tcattctctcctcttggtgg 88
              ||||||||||||||||||||
Sbjct: 124979 tcattctctcctcttggtgg 124998
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>gb|BC050878.1| Mus musculus, clone IMAGE:6512811, mRNA
          Length = 1845

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 577 agcagcagcagctgaggcatcaga 600
           |||||||||||| |||||||||||
Sbjct: 361 agcagcagcagcagaggcatcaga 384
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 593     gcatcagattcttctggttc 612
               ||||||||||||||||||||
Sbjct: 6643058 gcatcagattcttctggttc 6643077
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>gb|AC009102.10| Homo sapiens chromosome 16 clone RP11-441F2, complete sequence
          Length = 183394

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 587    gctgaggcatcagattcttctggttcta 614
              |||||||||||| ||||||| |||||||
Sbjct: 157912 gctgaggcatcacattcttcaggttcta 157885
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>gb|AC104091.4| Homo sapiens BAC clone RP11-1173K8 from 2, complete sequence
          Length = 67702

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 580   agcagcagctgaggcatcag 599
             ||||||||||||||||||||
Sbjct: 67624 agcagcagctgaggcatcag 67643
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>gb|AC079411.6| Homo sapiens chromosome 16 clone CTD-2050B12, complete sequence
          Length = 114356

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 587   gctgaggcatcagattcttctggttcta 614
             |||||||||||| ||||||| |||||||
Sbjct: 26780 gctgaggcatcacattcttcaggttcta 26753
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>gb|AC079602.15| Homo sapiens 12 BAC RP11-216P16 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 172008

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 78     cctcttggtggcaaaatggc 97
              ||||||||||||||||||||
Sbjct: 110426 cctcttggtggcaaaatggc 110445
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>gb|AC006369.3| Homo sapiens BAC clone RP11-278G12 from 2, complete sequence
          Length = 188359

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 580    agcagcagctgaggcatcag 599
              ||||||||||||||||||||
Sbjct: 186452 agcagcagctgaggcatcag 186433
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>ref|XM_233365.3| PREDICTED: Rattus norvegicus similar to hypothetical protein
           A430070M19 (LOC313485), mRNA
          Length = 2685

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 311 tcaggagcagcttcagtgtt 330
           ||||||||||||||||||||
Sbjct: 50  tcaggagcagcttcagtgtt 31
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>dbj|AP002094.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0483F08
          Length = 148985

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 593    gcatcagattcttctggttc 612
              ||||||||||||||||||||
Sbjct: 123229 gcatcagattcttctggttc 123248
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>dbj|BS000222.1| Pan troglodytes chromosome 22 clone:RP43-111J12, map 22, complete
             sequences
          Length = 189474

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 142   tctgcttccatttatgcaca 161
             ||||||||||||||||||||
Sbjct: 69083 tctgcttccatttatgcaca 69064
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>dbj|AK073330.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024A12, full
            insert sequence
          Length = 1869

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 593  gcatcagattcttctggttc 612
            ||||||||||||||||||||
Sbjct: 1103 gcatcagattcttctggttc 1084
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>emb|AJ239322.3|HS156L9 Homo sapiens sequence from PAC RPCI-1 156L9, complete sequence
          Length = 111293

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 142   tctgcttccatttatgcaca 161
             ||||||||||||||||||||
Sbjct: 81423 tctgcttccatttatgcaca 81442
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>dbj|AP001700.1| Homo sapiens genomic DNA, chromosome 21q, section 44/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 142    tctgcttccatttatgcaca 161
              ||||||||||||||||||||
Sbjct: 261241 tctgcttccatttatgcaca 261222
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>gb|AC006289.1|AC006289 Mus musculus chromosome 17, clone 29_N_7, complete sequence
          Length = 201986

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 88     gcaaaatggctgatcccaac 107
              ||||||||||||||||||||
Sbjct: 161728 gcaaaatggctgatcccaac 161747
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>dbj|AP001998.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-367C21, complete
             sequence
          Length = 161529

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 16    ttcataattatgttctacatacaa 39
             |||| |||||||||||||||||||
Sbjct: 53487 ttcaaaattatgttctacatacaa 53464
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>gb|AC167333.3| Mus musculus BAC clone RP23-92L4 from chromosome 5, complete sequence
          Length = 236596

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 548    tcagtgctcagcacctctgg 567
              ||||||||||||||||||||
Sbjct: 208112 tcagtgctcagcacctctgg 208131
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>emb|CT573030.2| Mouse DNA sequence from clone RP24-100B3 on chromosome 17, complete
             sequence
          Length = 111957

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 88    gcaaaatggctgatcccaac 107
             ||||||||||||||||||||
Sbjct: 23317 gcaaaatggctgatcccaac 23336
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>gb|U09822.1|HSU09822 Human cosmid clone 26h7 from Xq27.2-q27.3
          Length = 34683

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 311   tcaggagcagcttcagtgtt 330
             ||||||||||||||||||||
Sbjct: 22780 tcaggagcagcttcagtgtt 22799
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>emb|AJ006996.1|HSG1150 Homo sapiens chromosome 21 PAC LLNLP704G1150Q13, complete sequence
          Length = 178660

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 142   tctgcttccatttatgcaca 161
             ||||||||||||||||||||
Sbjct: 76179 tctgcttccatttatgcaca 76160


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,247,860
Number of Sequences: 3902068
Number of extensions: 6247860
Number of successful extensions: 118611
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 118427
Number of HSP's gapped (non-prelim): 184
length of query: 647
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 624
effective length of database: 17,143,297,704
effective search space: 10697417767296
effective search space used: 10697417767296
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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