ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags29n01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY534122.1|SEG_AY534122S1 Aegilops tauschii transposon XJ, co... 66 1e-07
2ref|XM_549977.1| Oryza sativa (japonica cultivar-group), mRNA 54 5e-04
3emb|AJ277468.1|OSA277468 Oryza sativa rbbi3-1 gene for putative ... 54 5e-04
4dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 54 5e-04
5dbj|AP003233.3| Oryza sativa (japonica cultivar-group) genomic D... 54 5e-04
6dbj|AP003046.2| Oryza sativa (japonica cultivar-group) genomic D... 54 5e-04
7dbj|AK062394.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 5e-04
8ref|XM_549982.1| Oryza sativa (japonica cultivar-group), mRNA 52 0.002
9emb|AJ277472.1|OSA277472 Oryza sativa rbbi2-5 gene for putative ... 52 0.002
10dbj|AP002909.2| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
11ref|NM_184202.2| Oryza sativa (japonica cultivar-group), mRNA 50 0.009
12dbj|AP002860.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.009
13dbj|AK105455.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.009
14dbj|AK102138.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.009
15ref|XM_549980.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.13
16ref|XM_549983.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.13
17ref|XM_549978.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.13
18ref|NM_184178.2| Oryza sativa (japonica cultivar-group), mRNA 46 0.13
19emb|AJ277470.1|OSA277470 Oryza sativa rbbi2-3 gene for putative ... 46 0.13
20emb|AJ277469.1|OSA277469 Oryza sativa rbbi3-3 gene for rice Bowm... 46 0.13
21dbj|AK108197.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.13
22dbj|AK104367.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.13
23dbj|AK104110.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.13
24dbj|AK099279.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.13
25dbj|AK067257.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.13
26dbj|AK064050.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.13
27gb|AY103562.1| Zea mays PCO085487 mRNA sequence 46 0.13
28gb|AY104323.1| Zea mays PCO085485 mRNA sequence 46 0.13
29dbj|AB098712.1| Oryza sativa (japonica cultivar-group) ti mRNA f... 46 0.13
30ref|XM_549975.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.53
31ref|XM_549976.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.53
32gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome 44 0.53
33dbj|AK104671.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.53
34dbj|AK104410.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.53
35dbj|AK070467.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.53
36dbj|AK065846.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.53
37dbj|AK060800.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.53
38gb|U57640.1|OSU57640 Oryza sativa Bowman-Birk type trypsin inhib... 44 0.53
39emb|AL935300.10| Zebrafish DNA sequence from clone CH211-241E1, ... 44 0.53
40gb|U76004.1|OSU76004 Oryza sativa Bowman-Birk proteinase inhibit... 44 0.53
41gb|AY534123.1|SEG_AY534122S2 Aegilops tauschii transposons Caspa... 42 2.1
42emb|AL929354.1|PFA929354 Plasmodium falciparum strain 3D7, chrom... 42 2.1
43gb|AC069078.5| Homo sapiens chromosome 10 clone RP11-492B17, com... 42 2.1
44gb|AC135891.3| Homo sapiens 12 BAC RP11-764E9 (Roswell Park Canc... 42 2.1
45ref|NM_001012364.1| Mus musculus TNNI3 interacting kinase (Tnni3... 40 8.2
46ref|NM_177066.3| Mus musculus TNNI3 interacting kinase (Tnni3k),... 40 8.2
47ref|XM_478001.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.2
48gb|AC123646.8| Mus musculus chromosome 19, clone RP23-104P24, co... 40 8.2
49ref|XM_430383.1| PREDICTED: Gallus gallus LOC426339 (LOC426339),... 40 8.2
50ref|XM_418373.1| PREDICTED: Gallus gallus similar to collagen tr... 40 8.2
51gb|AY657178.1| Synthetic construct Peudomonas aeruginosa clone F... 40 8.2
52gb|AC163092.4| Mus musculus chromosome 3, clone RP24-212F17, com... 40 8.2
53ref|XM_925029.2| PREDICTED: Mus musculus TNNI3 interacting kinas... 40 8.2
54ref|XM_917588.2| PREDICTED: Mus musculus TNNI3 interacting kinas... 40 8.2
55ref|XM_925036.2| PREDICTED: Mus musculus TNNI3 interacting kinas... 40 8.2
56gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complet... 40 8.2
57emb|CR626872.8| Zebrafish DNA sequence from clone DKEY-38L22 in ... 40 8.2
58emb|AL732579.5| Human DNA sequence from clone RP11-274K13 on chr... 40 8.2
59emb|AL162419.34| Human DNA sequence from clone RP11-358M14 on ch... 40 8.2
60emb|AJ277471.1|OSA277471 Oryza sativa rbbi2-4 gene for putative ... 40 8.2
61gb|AC110794.3| Homo sapiens BAC clone RP11-598O12 from 4, comple... 40 8.2
62gb|AE012542.1| Xanthomonas campestris pv. campestris str. ATCC 3... 40 8.2
63ref|NM_141957.2| Drosophila melanogaster CG6359-RA, transcript v... 40 8.2
64gb|AY071431.1| Drosophila melanogaster RE52028 full length cDNA 40 8.2
65emb|BX935556.2| Gallus gallus finished cDNA, clone ChEST82g13 40 8.2
66gb|AC007668.7| Drosophila melanogaster, chromosome 3R, region 87... 40 8.2
67gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 40 8.2
68ref|NM_001017819.1| Danio rerio zgc:110210 (zgc:110210), mRNA 40 8.2
69gb|BC092798.1| Danio rerio zgc:110210, mRNA (cDNA clone MGC:1102... 40 8.2
70dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.2
71gb|AC007752.6|AC007752 Drosophila melanogaster, chromosome 3R, r... 40 8.2
72gb|AE004526.1| Pseudomonas aeruginosa PAO1, section 87 of 529 of... 40 8.2
73dbj|AP003916.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.2
74emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 40 8.2
75emb|AM055942.1| Toxoplasma gondii, strain RH, genomic DNA chromo... 40 8.2
76gb|AE003696.3| Drosophila melanogaster chromosome 3R, section 34... 40 8.2
77dbj|AP000936.7| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 8.2
78gb|AY526096.1| Mus musculus cardiac ankyrin repeat kinase isofor... 40 8.2
79gb|AY526095.1| Mus musculus cardiac ankyrin repeat kinase isofor... 40 8.2
80emb|AL844560.5| Mouse DNA sequence from clone RP23-334M9 on chro... 40 8.2
81gb|AC157662.2| Gallus gallus BAC clone CH261-183P12 from chromos... 40 8.2 
>gb|AY534122.1|SEG_AY534122S1 Aegilops tauschii transposon XJ, complete sequence; putative Bowman
            Birk trypsin inhibitor gene, complete cds; Stowaway MITE,
            complete sequence; and insertion sequences xl_tt1a and
            xl_tt1b putative ripening related protein genes, complete
            cds
          Length = 26073

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 57/65 (87%)
 Strand = Plus / Minus

                                                                        
Query: 295  caggcaggtcttgcacgtcggagcacactttttgacctcgtcgacgcagcggcacgtcgg 354
            ||||||||||||||| ||||| || ||||  | |||||||||| ||||| ||||||||||
Sbjct: 8899 caggcaggtcttgcaggtcggggcgcactgctcgacctcgtcggcgcagtggcacgtcgg 8840

                 
Query: 355  cgggt 359
            |||||
Sbjct: 8839 cgggt 8835



 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 556  ctggtcgcagcacttccacggc 577
            ||||||||||||||||||||||
Sbjct: 8632 ctggtcgcagcacttccacggc 8611



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 465  tggacggcccgcaggacttgcaggt 489
            |||||||| ||||||||||||||||
Sbjct: 8723 tggacggcacgcaggacttgcaggt 8699
to top
>ref|XM_549977.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 930

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                      
Query: 559 gtcgcagcacttccacggcctcttctt 585
           |||||||||||||||||||||||||||
Sbjct: 414 gtcgcagcacttccacggcctcttctt 388
to top
>emb|AJ277468.1|OSA277468 Oryza sativa rbbi3-1 gene for putative Bowman Birk trypsin inhibitor
          Length = 17385

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                       
Query: 559  gtcgcagcacttccacggcctcttctt 585
            |||||||||||||||||||||||||||
Sbjct: 6582 gtcgcagcacttccacggcctcttctt 6556



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 59/71 (83%)
 Strand = Plus / Minus

                                                                        
Query: 320  cactttttgacctcgtcgacgcagcggcacgtcggcgggttggacctggtgcagatagcc 379
            ||||| || |||||||| | ||||||||| |||||||||||   | || ||||||  |||
Sbjct: 4169 cacttgttcacctcgtccatgcagcggcaggtcggcgggttcatcttgttgcagaaggcc 4110

                       
Query: 380  ttgtcgcagca 390
            |||||||||||
Sbjct: 4109 ttgtcgcagca 4099



 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 559   gtcgcagcacttccacggcctc 580
             ||||||||||||||||||||||
Sbjct: 13282 gtcgcagcacttccacggcctc 13261



 Score = 44.1 bits (22), Expect = 0.53
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                         
Query: 329   acctcgtcgacgcagcggcacgtcggcgggttggacctggtgcagatagccttgtcgcag 388
             ||||||||| ||||| ||||  |||| |||   |||||||||||||  ||||||||||||
Sbjct: 10480 acctcgtcggcgcagtggcagatcggtgggagagacctggtgcagaaggccttgtcgcag 10421

               
Query: 389   ca 390
             ||
Sbjct: 10420 ca 10419



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 563  cagcacttccacggcctcttc 583
            |||||||||||||||||||||
Sbjct: 3899 cagcacttccacggcctcttc 3879



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 380   ttgtcgcagcactcccacgg 399
             ||||||||||||||||||||
Sbjct: 10222 ttgtcgcagcactcccacgg 10203
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                          
Query: 559     gtcgcagcacttccacggcctcttctt 585
               |||||||||||||||||||||||||||
Sbjct: 1344634 gtcgcagcacttccacggcctcttctt 1344660



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                         
Query: 559     gtcgcagcacttccacggcctcttct 584
               ||||||||||||||||||||||||||
Sbjct: 1363103 gtcgcagcacttccacggcctcttct 1363128



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                    
Query: 528     tcggcgggatggacctggtgcacaccgcctggtcgcagcacttccacggcctc 580
               ||||||| || ||||| |||||||| || | ||||||||| ||||||||||||
Sbjct: 1515274 tcggcggcatcgaccttgtgcacacggcgtcgtcgcagcatttccacggcctc 1515222



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                          
Query: 559     gtcgcagcacttccacggcctcttctt 585
               ||||||||||||||||||| |||||||
Sbjct: 1365240 gtcgcagcacttccacggcttcttctt 1365266



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                          
Query: 523     gcagatcggcgggatggacctggtgca 549
               ||||||||||||||| |||||||||||
Sbjct: 1365000 gcagatcggcgggatcgacctggtgca 1365026



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 559     gtcgcagcacttccacggcctct 581
               |||||||||||||||||||||||
Sbjct: 1353366 gtcgcagcacttccacggcctct 1353388



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 59/71 (83%)
 Strand = Plus / Plus

                                                                           
Query: 320     cactttttgacctcgtcgacgcagcggcacgtcggcgggttggacctggtgcagatagcc 379
               ||||| || |||||||| | ||||||||| |||||||||||   | || ||||||  |||
Sbjct: 1347060 cacttgttcacctcgtccatgcagcggcaggtcggcgggttcatcttgttgcagaaggcc 1347119

                          
Query: 380     ttgtcgcagca 390
               |||||||||||
Sbjct: 1347120 ttgtcgcagca 1347130



 Score = 44.1 bits (22), Expect = 0.53
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                           
Query: 329     acctcgtcgacgcagcggcacgtcggcgggttggacctggtgcagatagccttgtcgcag 388
               |||||||| | ||||||||| |||||||||||   | || ||||||  ||||||||||||
Sbjct: 1353109 acctcgtccatgcagcggcaggtcggcgggttcatcttgttgcagaaggccttgtcgcag 1353168

                 
Query: 389     ca 390
               ||
Sbjct: 1353169 ca 1353170



 Score = 44.1 bits (22), Expect = 0.53
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                           
Query: 329     acctcgtcgacgcagcggcacgtcggcgggttggacctggtgcagatagccttgtcgcag 388
               ||||||||| ||||| ||||  |||| |||   |||||||||||||  ||||||||||||
Sbjct: 1340736 acctcgtcggcgcagtggcagatcggtgggagagacctggtgcagaaggccttgtcgcag 1340795

                 
Query: 389     ca 390
               ||
Sbjct: 1340796 ca 1340797



 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 559     gtcgcagcacttccacggcctc 580
               ||||||||||||||||||||||
Sbjct: 1337896 gtcgcagcacttccacggcctc 1337917



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 563     cagcacttccacggcctcttc 583
               |||||||||||||||||||||
Sbjct: 1347330 cagcacttccacggcctcttc 1347350



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 380     ttgtcgcagcactcccacgg 399
               ||||||||||||||||||||
Sbjct: 1340994 ttgtcgcagcactcccacgg 1341013
to top
>dbj|AP003233.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0037C04
          Length = 137879

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                        
Query: 559   gtcgcagcacttccacggcctcttctt 585
             |||||||||||||||||||||||||||
Sbjct: 42685 gtcgcagcacttccacggcctcttctt 42711



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                       
Query: 559   gtcgcagcacttccacggcctcttct 584
             ||||||||||||||||||||||||||
Sbjct: 61154 gtcgcagcacttccacggcctcttct 61179



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 559   gtcgcagcacttccacggcctcttctt 585
             ||||||||||||||||||| |||||||
Sbjct: 63291 gtcgcagcacttccacggcttcttctt 63317



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 523   gcagatcggcgggatggacctggtgca 549
             ||||||||||||||| |||||||||||
Sbjct: 63051 gcagatcggcgggatcgacctggtgca 63077



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 559   gtcgcagcacttccacggcctct 581
             |||||||||||||||||||||||
Sbjct: 51417 gtcgcagcacttccacggcctct 51439



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 59/71 (83%)
 Strand = Plus / Plus

                                                                         
Query: 320   cactttttgacctcgtcgacgcagcggcacgtcggcgggttggacctggtgcagatagcc 379
             ||||| || |||||||| | ||||||||| |||||||||||   | || ||||||  |||
Sbjct: 45111 cacttgttcacctcgtccatgcagcggcaggtcggcgggttcatcttgttgcagaaggcc 45170

                        
Query: 380   ttgtcgcagca 390
             |||||||||||
Sbjct: 45171 ttgtcgcagca 45181



 Score = 44.1 bits (22), Expect = 0.53
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                         
Query: 329   acctcgtcgacgcagcggcacgtcggcgggttggacctggtgcagatagccttgtcgcag 388
             |||||||| | ||||||||| |||||||||||   | || ||||||  ||||||||||||
Sbjct: 51160 acctcgtccatgcagcggcaggtcggcgggttcatcttgttgcagaaggccttgtcgcag 51219

               
Query: 389   ca 390
             ||
Sbjct: 51220 ca 51221



 Score = 44.1 bits (22), Expect = 0.53
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                         
Query: 329   acctcgtcgacgcagcggcacgtcggcgggttggacctggtgcagatagccttgtcgcag 388
             ||||||||| ||||| ||||  |||| |||   |||||||||||||  ||||||||||||
Sbjct: 38787 acctcgtcggcgcagtggcagatcggtgggagagacctggtgcagaaggccttgtcgcag 38846

               
Query: 389   ca 390
             ||
Sbjct: 38847 ca 38848



 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 559   gtcgcagcacttccacggcctc 580
             ||||||||||||||||||||||
Sbjct: 35947 gtcgcagcacttccacggcctc 35968



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 563   cagcacttccacggcctcttc 583
             |||||||||||||||||||||
Sbjct: 45381 cagcacttccacggcctcttc 45401



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 380   ttgtcgcagcactcccacgg 399
             ||||||||||||||||||||
Sbjct: 39045 ttgtcgcagcactcccacgg 39064
to top
>dbj|AP003046.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0445D12
          Length = 140952

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                         
Query: 559    gtcgcagcacttccacggcctcttctt 585
              |||||||||||||||||||||||||||
Sbjct: 138288 gtcgcagcacttccacggcctcttctt 138314



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 59/71 (83%)
 Strand = Plus / Plus

                                                                          
Query: 320    cactttttgacctcgtcgacgcagcggcacgtcggcgggttggacctggtgcagatagcc 379
              ||||| || |||||||| | ||||||||| |||||||||||   | || ||||||  |||
Sbjct: 140714 cacttgttcacctcgtccatgcagcggcaggtcggcgggttcatcttgttgcagaaggcc 140773

                         
Query: 380    ttgtcgcagca 390
              |||||||||||
Sbjct: 140774 ttgtcgcagca 140784



 Score = 44.1 bits (22), Expect = 0.53
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                          
Query: 329    acctcgtcgacgcagcggcacgtcggcgggttggacctggtgcagatagccttgtcgcag 388
              ||||||||| ||||| ||||  |||| |||   |||||||||||||  ||||||||||||
Sbjct: 134390 acctcgtcggcgcagtggcagatcggtgggagagacctggtgcagaaggccttgtcgcag 134449

                
Query: 389    ca 390
              ||
Sbjct: 134450 ca 134451



 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 559    gtcgcagcacttccacggcctc 580
              ||||||||||||||||||||||
Sbjct: 131550 gtcgcagcacttccacggcctc 131571



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 380    ttgtcgcagcactcccacgg 399
              ||||||||||||||||||||
Sbjct: 134648 ttgtcgcagcactcccacgg 134667
to top
>dbj|AK062394.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-102-D05, full
           insert sequence
          Length = 930

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                      
Query: 559 gtcgcagcacttccacggcctcttctt 585
           |||||||||||||||||||||||||||
Sbjct: 414 gtcgcagcacttccacggcctcttctt 388
to top
>ref|XM_549982.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 429

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                     
Query: 559 gtcgcagcacttccacggcctcttct 584
           ||||||||||||||||||||||||||
Sbjct: 36  gtcgcagcacttccacggcctcttct 11
to top
>emb|AJ277472.1|OSA277472 Oryza sativa rbbi2-5 gene for putative Bowman Birk tryspin inhibitor
          Length = 2378

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                      
Query: 559  gtcgcagcacttccacggcctcttct 584
            ||||||||||||||||||||||||||
Sbjct: 1402 gtcgcagcacttccacggcctcttct 1377
to top
>dbj|AP002909.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0044F08
          Length = 141528

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                       
Query: 559   gtcgcagcacttccacggcctcttct 584
             ||||||||||||||||||||||||||
Sbjct: 12724 gtcgcagcacttccacggcctcttct 12749



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 559   gtcgcagcacttccacggcctcttctt 585
             ||||||||||||||||||| |||||||
Sbjct: 14861 gtcgcagcacttccacggcttcttctt 14887



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 523   gcagatcggcgggatggacctggtgca 549
             ||||||||||||||| |||||||||||
Sbjct: 14621 gcagatcggcgggatcgacctggtgca 14647



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 559  gtcgcagcacttccacggcctct 581
            |||||||||||||||||||||||
Sbjct: 2987 gtcgcagcacttccacggcctct 3009



 Score = 44.1 bits (22), Expect = 0.53
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                        
Query: 329  acctcgtcgacgcagcggcacgtcggcgggttggacctggtgcagatagccttgtcgcag 388
            |||||||| | ||||||||| |||||||||||   | || ||||||  ||||||||||||
Sbjct: 2730 acctcgtccatgcagcggcaggtcggcgggttcatcttgttgcagaaggccttgtcgcag 2789

              
Query: 389  ca 390
            ||
Sbjct: 2790 ca 2791
to top
>ref|NM_184202.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 876

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                
Query: 528 tcggcgggatggacctggtgcacaccgcctggtcgcagcacttccacggcctc 580
           ||||||| || ||||| |||||||| || | ||||||||| ||||||||||||
Sbjct: 436 tcggcggcatcgaccttgtgcacacggcgtcgtcgcagcatttccacggcctc 384
to top
>dbj|AP002860.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0409B08
          Length = 134673

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                  
Query: 528   tcggcgggatggacctggtgcacaccgcctggtcgcagcacttccacggcctc 580
             ||||||| || ||||| |||||||| || | ||||||||| ||||||||||||
Sbjct: 80922 tcggcggcatcgaccttgtgcacacggcgtcgtcgcagcatttccacggcctc 80870
to top
>dbj|AK105455.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-125-D07, full
           insert sequence
          Length = 876

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                
Query: 528 tcggcgggatggacctggtgcacaccgcctggtcgcagcacttccacggcctc 580
           ||||||| || ||||| |||||||| || | ||||||||| ||||||||||||
Sbjct: 436 tcggcggcatcgaccttgtgcacacggcgtcgtcgcagcatttccacggcctc 384
to top
>dbj|AK102138.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033085I16, full
           insert sequence
          Length = 879

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                
Query: 528 tcggcgggatggacctggtgcacaccgcctggtcgcagcacttccacggcctc 580
           ||||||| || ||||| |||||||| || | ||||||||| ||||||||||||
Sbjct: 439 tcggcggcatcgaccttgtgcacacggcgtcgtcgcagcatttccacggcctc 387
to top
>ref|XM_549980.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 411

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 559 gtcgcagcacttccacggcctct 581
           |||||||||||||||||||||||
Sbjct: 27  gtcgcagcacttccacggcctct 5



 Score = 44.1 bits (22), Expect = 0.53
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                       
Query: 329 acctcgtcgacgcagcggcacgtcggcgggttggacctggtgcagatagccttgtcgcag 388
           |||||||| | ||||||||| |||||||||||   | || ||||||  ||||||||||||
Sbjct: 284 acctcgtccatgcagcggcaggtcggcgggttcatcttgttgcagaaggccttgtcgcag 225

             
Query: 389 ca 390
           ||
Sbjct: 224 ca 223
to top
>ref|XM_549983.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 803

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 559 gtcgcagcacttccacggcctcttctt 585
           ||||||||||||||||||| |||||||
Sbjct: 541 gtcgcagcacttccacggcttcttctt 567



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 523 gcagatcggcgggatggacctggtgca 549
           ||||||||||||||| |||||||||||
Sbjct: 301 gcagatcggcgggatcgacctggtgca 327
to top
>ref|XM_549978.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1047

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 59/71 (83%)
 Strand = Plus / Minus

                                                                       
Query: 320 cactttttgacctcgtcgacgcagcggcacgtcggcgggttggacctggtgcagatagcc 379
           ||||| || |||||||| | ||||||||| |||||||||||   | || ||||||  |||
Sbjct: 664 cacttgttcacctcgtccatgcagcggcaggtcggcgggttcatcttgttgcagaaggcc 605

                      
Query: 380 ttgtcgcagca 390
           |||||||||||
Sbjct: 604 ttgtcgcagca 594



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 563 cagcacttccacggcctcttc 583
           |||||||||||||||||||||
Sbjct: 394 cagcacttccacggcctcttc 374
to top
>ref|NM_184178.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 830

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 523 gcagatcggcgggatggacctggtgca 549
           ||||||||||||||| |||||||||||
Sbjct: 434 gcagatcggcgggatcgacctggtgca 408



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 559 gtcgcagcacttccacggcctcttctt 585
           ||||||||||||||||||| |||||||
Sbjct: 194 gtcgcagcacttccacggcttcttctt 168
to top
>emb|AJ277470.1|OSA277470 Oryza sativa rbbi2-3 gene for putative Bowman Birk trypsin inhibitor
          Length = 2336

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 523  gcagatcggcgggatggacctggtgca 549
            ||||||||||||||| |||||||||||
Sbjct: 1041 gcagatcggcgggatcgacctggtgca 1015



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 559 gtcgcagcacttccacggcctcttctt 585
           ||||||||||||||||||| |||||||
Sbjct: 801 gtcgcagcacttccacggcttcttctt 775
to top
>emb|AJ277469.1|OSA277469 Oryza sativa rbbi3-3 gene for rice Bowman Birk trypsin inhibitor
          Length = 4624

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 559  gtcgcagcacttccacggcctct 581
            |||||||||||||||||||||||
Sbjct: 3063 gtcgcagcacttccacggcctct 3041



 Score = 44.1 bits (22), Expect = 0.53
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                        
Query: 329  acctcgtcgacgcagcggcacgtcggcgggttggacctggtgcagatagccttgtcgcag 388
            |||||||| | ||||||||| |||||||||||   | || ||||||  ||||||||||||
Sbjct: 3320 acctcgtccatgcagcggcaggtcggcgggttcatcttgttgcagaaggccttgtcgcag 3261

              
Query: 389  ca 390
            ||
Sbjct: 3260 ca 3259
to top
>dbj|AK108197.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-140-C08, full
           insert sequence
          Length = 802

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 559 gtcgcagcacttccacggcctcttctt 585
           ||||||||||||||||||| |||||||
Sbjct: 540 gtcgcagcacttccacggcttcttctt 566



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 523 gcagatcggcgggatggacctggtgca 549
           ||||||||||||||| |||||||||||
Sbjct: 300 gcagatcggcgggatcgacctggtgca 326
to top
>dbj|AK104367.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-D09, full
           insert sequence
          Length = 1059

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 59/71 (83%)
 Strand = Plus / Minus

                                                                       
Query: 320 cactttttgacctcgtcgacgcagcggcacgtcggcgggttggacctggtgcagatagcc 379
           ||||| || |||||||| | ||||||||| |||||||||||   | || ||||||  |||
Sbjct: 664 cacttgttcacctcgtccatgcagcggcaggtcggcgggttcatcttgttgcagaaggcc 605

                      
Query: 380 ttgtcgcagca 390
           |||||||||||
Sbjct: 604 ttgtcgcagca 594



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 563 cagcacttccacggcctcttc 583
           |||||||||||||||||||||
Sbjct: 394 cagcacttccacggcctcttc 374
to top
>dbj|AK104110.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-G03, full
           insert sequence
          Length = 1047

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 59/71 (83%)
 Strand = Plus / Minus

                                                                       
Query: 320 cactttttgacctcgtcgacgcagcggcacgtcggcgggttggacctggtgcagatagcc 379
           ||||| || |||||||| | ||||||||| |||||||||||   | || ||||||  |||
Sbjct: 664 cacttgttcacctcgtccatgcagcggcaggtcggcgggttcatcttgttgcagaaggcc 605

                      
Query: 380 ttgtcgcagca 390
           |||||||||||
Sbjct: 604 ttgtcgcagca 594



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 563 cagcacttccacggcctcttc 583
           |||||||||||||||||||||
Sbjct: 394 cagcacttccacggcctcttc 374
to top
>dbj|AK099279.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023130E04, full
           insert sequence
          Length = 830

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 523 gcagatcggcgggatggacctggtgca 549
           ||||||||||||||| |||||||||||
Sbjct: 434 gcagatcggcgggatcgacctggtgca 408



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 559 gtcgcagcacttccacggcctcttctt 585
           ||||||||||||||||||| |||||||
Sbjct: 194 gtcgcagcacttccacggcttcttctt 168
to top
>dbj|AK067257.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096H09, full
           insert sequence
          Length = 1072

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 59/71 (83%)
 Strand = Plus / Minus

                                                                       
Query: 320 cactttttgacctcgtcgacgcagcggcacgtcggcgggttggacctggtgcagatagcc 379
           ||||| || |||||||| | ||||||||| |||||||||||   | || ||||||  |||
Sbjct: 662 cacttgttcacctcgtccatgcagcggcaggtcggcgggttcatcttgttgcagaaggcc 603

                      
Query: 380 ttgtcgcagca 390
           |||||||||||
Sbjct: 602 ttgtcgcagca 592



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 563 cagcacttccacggcctcttc 583
           |||||||||||||||||||||
Sbjct: 392 cagcacttccacggcctcttc 372
to top
>dbj|AK064050.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-125-E08, full
           insert sequence
          Length = 847

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 523 gcagatcggcgggatggacctggtgca 549
           ||||||||||||||| |||||||||||
Sbjct: 433 gcagatcggcgggatcgacctggtgca 407



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 559 gtcgcagcacttccacggcctcttctt 585
           ||||||||||||||||||| |||||||
Sbjct: 193 gtcgcagcacttccacggcttcttctt 167
to top
>gb|AY103562.1| Zea mays PCO085487 mRNA sequence
          Length = 2258

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 559  gtcgcagcacttccacggcctcttctt 585
            ||||||||| |||||||||||||||||
Sbjct: 2199 gtcgcagcatttccacggcctcttctt 2173
to top
>gb|AY104323.1| Zea mays PCO085485 mRNA sequence
          Length = 1303

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 559 gtcgcagcacttccacggcctcttctt 585
           ||||||||| |||||||||||||||||
Sbjct: 579 gtcgcagcatttccacggcctcttctt 553
to top
>dbj|AB098712.1| Oryza sativa (japonica cultivar-group) ti mRNA for trypsin
           inhibitor, complete cds
          Length = 1061

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 559 gtcgcagcacttccacggcctct 581
           |||||||||||||||||||||||
Sbjct: 386 gtcgcagcacttccacggcctct 364



 Score = 44.1 bits (22), Expect = 0.53
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                       
Query: 329 acctcgtcgacgcagcggcacgtcggcgggttggacctggtgcagatagccttgtcgcag 388
           |||||||| | ||||||||| |||||||||||   | || ||||||  ||||||||||||
Sbjct: 643 acctcgtccatgcagcggcaggtcggcgggttcatcttgttgcagaaggccttgtcgcag 584

             
Query: 389 ca 390
           ||
Sbjct: 583 ca 582
to top
>ref|XM_549975.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 855

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 559 gtcgcagcacttccacggcctc 580
           ||||||||||||||||||||||
Sbjct: 198 gtcgcagcacttccacggcctc 177
to top
>ref|XM_549976.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 911

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                       
Query: 329 acctcgtcgacgcagcggcacgtcggcgggttggacctggtgcagatagccttgtcgcag 388
           ||||||||| ||||| ||||  |||| |||   |||||||||||||  ||||||||||||
Sbjct: 543 acctcgtcggcgcagtggcagatcggtgggagagacctggtgcagaaggccttgtcgcag 484

             
Query: 389 ca 390
           ||
Sbjct: 483 ca 482



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 380 ttgtcgcagcactcccacgg 399
           ||||||||||||||||||||
Sbjct: 285 ttgtcgcagcactcccacgg 266
to top
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome
          Length = 3814139

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 195     taccgccggtggcaacgtcctcccgg 220
               ||||||||||||||||| ||||||||
Sbjct: 1593049 taccgccggtggcaacgacctcccgg 1593024
to top
>dbj|AK104671.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-D04, full
           insert sequence
          Length = 855

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 559 gtcgcagcacttccacggcctc 580
           ||||||||||||||||||||||
Sbjct: 198 gtcgcagcacttccacggcctc 177
to top
>dbj|AK104410.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-G05, full
           insert sequence
          Length = 858

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 559 gtcgcagcacttccacggcctc 580
           ||||||||||||||||||||||
Sbjct: 203 gtcgcagcacttccacggcctc 182
to top
>dbj|AK070467.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023053A08, full
           insert sequence
          Length = 859

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 559 gtcgcagcacttccacggcctc 580
           ||||||||||||||||||||||
Sbjct: 204 gtcgcagcacttccacggcctc 183
to top
>dbj|AK065846.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013042O18, full
           insert sequence
          Length = 911

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                       
Query: 329 acctcgtcgacgcagcggcacgtcggcgggttggacctggtgcagatagccttgtcgcag 388
           ||||||||| ||||| ||||  |||| |||   |||||||||||||  ||||||||||||
Sbjct: 543 acctcgtcggcgcagtggcagatcggtgggagagacctggtgcagaaggccttgtcgcag 484

             
Query: 389 ca 390
           ||
Sbjct: 483 ca 482



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 380 ttgtcgcagcactcccacgg 399
           ||||||||||||||||||||
Sbjct: 285 ttgtcgcagcactcccacgg 266
to top
>dbj|AK060800.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-F04, full
            insert sequence
          Length = 1958

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                        
Query: 329  acctcgtcgacgcagcggcacgtcggcgggttggacctggtgcagatagccttgtcgcag 388
            ||||||||| ||||| ||||  |||| |||   |||||||||||||  ||||||||||||
Sbjct: 1582 acctcgtcggcgcagtggcagatcggtgggagagacctggtgcagaaggccttgtcgcag 1523

              
Query: 389  ca 390
            ||
Sbjct: 1522 ca 1521



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 380  ttgtcgcagcactcccacgg 399
            ||||||||||||||||||||
Sbjct: 1324 ttgtcgcagcactcccacgg 1305
to top
>gb|U57640.1|OSU57640 Oryza sativa Bowman-Birk type trypsin inhibitor mRNA, complete cds
          Length = 855

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                       
Query: 329 acctcgtcgacgcagcggcacgtcggcgggttggacctggtgcagatagccttgtcgcag 388
           |||||||| | ||||||||| |||||||||||   | || ||||||  ||||||||||||
Sbjct: 425 acctcgtccatgcagcggcaggtcggcgggttcatcttgttgcagaaggccttgtcgcag 366

             
Query: 389 ca 390
           ||
Sbjct: 365 ca 364
to top
>emb|AL935300.10| Zebrafish DNA sequence from clone CH211-241E1, complete sequence
          Length = 157088

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 84     atccattttattttattcttac 105
              ||||||||||||||||||||||
Sbjct: 102096 atccattttattttattcttac 102075
to top
>gb|U76004.1|OSU76004 Oryza sativa Bowman-Birk proteinase inhibitor mRNA, complete cds
          Length = 1050

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                       
Query: 329 acctcgtcgacgcagcggcacgtcggcgggttggacctggtgcagatagccttgtcgcag 388
           |||||||| | ||||||||| |||||||||||   | || ||||||  ||||||||||||
Sbjct: 620 acctcgtccatgcagcggcaggtcggcgggttcatcttgttgcagaaggccttgtcgcag 561

             
Query: 389 ca 390
           ||
Sbjct: 560 ca 559
to top
>gb|AY534123.1|SEG_AY534122S2 Aegilops tauschii transposons Caspar, XJ, Angela, and XJ, complete
             sequence; LRR protein WM1.7 (WM1.7) and LRR protein WM1.12
             (WM1.12) genes, complete cds; transposons Ophelia2,
             Angela3s, and XJ3, complete sequence; LRR protein WM1.3
             (WM1.3) gene, complete cds; Stowaway MITE, transposons
             XJ1, Jody, Angela, and XJ and Stowaway MITE, complete
             sequence; LRR protein WM1.2 (WM1.2) and LLR protein WM1.1
             (WM1.1) genes, complete cds; transposons XJ, XA, Angela,
             and Fred and WM1.11 gene, complete sequence; RPM1-like
             sequence and LRR protein WM1.10 (WM1.10) genes, complete
             cds; and transposon XJ, complete sequence
          Length = 198649

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 33    attaaacattgccatgatgtcttactcataatt 65
             |||||||||||||| | ||||||| ||||||||
Sbjct: 56533 attaaacattgccaagttgtcttattcataatt 56565
to top
>emb|AL929354.1|PFA929354 Plasmodium falciparum strain 3D7, chromosome 5, segment 4/4
          Length = 340552

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 84     atccattttattttattctta 104
              |||||||||||||||||||||
Sbjct: 223881 atccattttattttattctta 223861
to top
>gb|AC069078.5| Homo sapiens chromosome 10 clone RP11-492B17, complete sequence
          Length = 187669

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 116   tgctgcagcagggcaggagga 136
             |||||||||||||||||||||
Sbjct: 72310 tgctgcagcagggcaggagga 72330
to top
>gb|AC135891.3| Homo sapiens 12 BAC RP11-764E9 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 92128

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 116   tgctgcagcagggcaggagga 136
             |||||||||||||||||||||
Sbjct: 10746 tgctgcagcagggcaggagga 10726
to top
>ref|NM_001012364.1| Mus musculus TNNI3 interacting kinase (Tnni3k), transcript variant
           2, mRNA
          Length = 2752

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 562 gcagcacttccacggcctct 581
           ||||||||||||||||||||
Sbjct: 561 gcagcacttccacggcctct 542
to top
>ref|NM_177066.3| Mus musculus TNNI3 interacting kinase (Tnni3k), transcript variant
           1, mRNA
          Length = 3032

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 562 gcagcacttccacggcctct 581
           ||||||||||||||||||||
Sbjct: 561 gcagcacttccacggcctct 542
to top
>ref|XM_478001.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 537

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 562 gcagcacttccacggcctcttctt 585
           |||||||| |||||||||||||||
Sbjct: 102 gcagcactcccacggcctcttctt 79
to top
>gb|AC123646.8| Mus musculus chromosome 19, clone RP23-104P24, complete sequence
          Length = 189534

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 84     atccattttattttattctt 103
              ||||||||||||||||||||
Sbjct: 113317 atccattttattttattctt 113336
to top
>ref|XM_430383.1| PREDICTED: Gallus gallus LOC426339 (LOC426339), partial mRNA
          Length = 554

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 231 ggggcgggacgggcccaaag 250
           ||||||||||||||||||||
Sbjct: 405 ggggcgggacgggcccaaag 424
to top
>ref|XM_418373.1| PREDICTED: Gallus gallus similar to collagen triple helix repeat
           containing 1 (LOC420262), mRNA
          Length = 1008

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 231 ggggcgggacgggcccaaag 250
           ||||||||||||||||||||
Sbjct: 227 ggggcgggacgggcccaaag 246
to top
>gb|AY657178.1| Synthetic construct Peudomonas aeruginosa clone FLH032358.01F
           PA0922 gene, partial cds
          Length = 315

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 561 cgcagcacttccacggcctc 580
           ||||||||||||||||||||
Sbjct: 266 cgcagcacttccacggcctc 247
to top
>gb|AC163092.4| Mus musculus chromosome 3, clone RP24-212F17, complete sequence
          Length = 150636

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 85     tccattttattttattctta 104
              ||||||||||||||||||||
Sbjct: 114329 tccattttattttattctta 114348
to top
>ref|XM_925029.2| PREDICTED: Mus musculus TNNI3 interacting kinase, transcript
           variant 4 (Tnni3k), mRNA
          Length = 3033

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 562 gcagcacttccacggcctct 581
           ||||||||||||||||||||
Sbjct: 561 gcagcacttccacggcctct 542
to top
>ref|XM_917588.2| PREDICTED: Mus musculus TNNI3 interacting kinase, transcript
           variant 3 (Tnni3k), mRNA
          Length = 3030

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 562 gcagcacttccacggcctct 581
           ||||||||||||||||||||
Sbjct: 561 gcagcacttccacggcctct 542
to top
>ref|XM_925036.2| PREDICTED: Mus musculus TNNI3 interacting kinase, transcript
           variant 6 (Tnni3k), mRNA
          Length = 3030

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 562 gcagcacttccacggcctct 581
           ||||||||||||||||||||
Sbjct: 561 gcagcacttccacggcctct 542
to top
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence
          Length = 2580084

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 114    ggtgctgcagcagggcagga 133
              ||||||||||||||||||||
Sbjct: 688058 ggtgctgcagcagggcagga 688077
to top
>emb|CR626872.8| Zebrafish DNA sequence from clone DKEY-38L22 in linkage group 7, complete
              sequence
          Length = 126802

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 110    tgctggtgctgcagcagggcagga 133
              ||||| ||||||||||||||||||
Sbjct: 106447 tgctgctgctgcagcagggcagga 106470
to top
>emb|AL732579.5| Human DNA sequence from clone RP11-274K13 on chromosome X Contains the
              5'end of a novel gene (LOC93380), a novel gene, the SLC9A6
              gene for solute carrier family 9 (sodium/hydrogen
              exchanger, isoform 6), a glyceraldehyde-3-phosphate
              dehydrogenase (GAPD) pseudogene (LOC139543), an E2F
              transcription factor 6 (E2F6) pseudogene (LOC139542) and
              two CpG islands, complete sequence
          Length = 151432

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 118    ctgcagcagggcaggaggac 137
              ||||||||||||||||||||
Sbjct: 108575 ctgcagcagggcaggaggac 108556
to top
>emb|AL162419.34| Human DNA sequence from clone RP11-358M14 on chromosome 9 Contains the 5'
              end of a variant of a novel gene (FLJ90578) and a CpG
              island, complete sequence
          Length = 174535

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 25     ttataaagattaaacattgc 44
              ||||||||||||||||||||
Sbjct: 171270 ttataaagattaaacattgc 171289
to top
>emb|AJ277471.1|OSA277471 Oryza sativa rbbi2-4 gene for putative Bowman Bird trypsin inhibitor
          Length = 3036

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 562  gcagcacttccacggcctcttctt 585
            |||||||| |||||||||||||||
Sbjct: 2044 gcagcactcccacggcctcttctt 2021
to top
>gb|AC110794.3| Homo sapiens BAC clone RP11-598O12 from 4, complete sequence
          Length = 148841

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 84    atccattttattttattctt 103
             ||||||||||||||||||||
Sbjct: 87842 atccattttattttattctt 87823
to top
>gb|AE012542.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 450
            of 460 of the complete genome
          Length = 11491

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 276  aagggcgcgacctggacggc 295
            ||||||||||||||||||||
Sbjct: 7105 aagggcgcgacctggacggc 7086
to top
>ref|NM_141957.2| Drosophila melanogaster CG6359-RA, transcript variant A (CG6359),
           mRNA
          Length = 1423

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 580 cttcttgcccgccgccatgg 599
           ||||||||||||||||||||
Sbjct: 450 cttcttgcccgccgccatgg 431
to top
>gb|AY071431.1| Drosophila melanogaster RE52028 full length cDNA
          Length = 1438

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 580 cttcttgcccgccgccatgg 599
           ||||||||||||||||||||
Sbjct: 450 cttcttgcccgccgccatgg 431
to top
>emb|BX935556.2| Gallus gallus finished cDNA, clone ChEST82g13
          Length = 1009

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 231 ggggcgggacgggcccaaag 250
           ||||||||||||||||||||
Sbjct: 226 ggggcgggacgggcccaaag 245
to top
>gb|AC007668.7| Drosophila melanogaster, chromosome 3R, region 87C-87C, BAC clone
              BACR02G11, complete sequence
          Length = 167239

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 580    cttcttgcccgccgccatgg 599
              ||||||||||||||||||||
Sbjct: 163455 cttcttgcccgccgccatgg 163436
to top
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 276     aagggcgcgacctggacggc 295
               ||||||||||||||||||||
Sbjct: 5042786 aagggcgcgacctggacggc 5042767
to top
>ref|NM_001017819.1| Danio rerio zgc:110210 (zgc:110210), mRNA
          Length = 2540

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 110  tgctggtgctgcagcagggcagga 133
            ||||| ||||||||||||||||||
Sbjct: 1075 tgctgctgctgcagcagggcagga 1052
to top
>gb|BC092798.1| Danio rerio zgc:110210, mRNA (cDNA clone MGC:110210 IMAGE:7295255),
            complete cds
          Length = 2540

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 110  tgctggtgctgcagcagggcagga 133
            ||||| ||||||||||||||||||
Sbjct: 1075 tgctgctgctgcagcagggcagga 1052
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 562      gcagcacttccacggcctcttctt 585
                |||||||| |||||||||||||||
Sbjct: 16273308 gcagcactcccacggcctcttctt 16273331
to top
>gb|AC007752.6|AC007752 Drosophila melanogaster, chromosome 3R, region 87C-87D, BAC clone
             BACR07J06, complete sequence
          Length = 193248

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 580   cttcttgcccgccgccatgg 599
             ||||||||||||||||||||
Sbjct: 71007 cttcttgcccgccgccatgg 70988
to top
>gb|AE004526.1| Pseudomonas aeruginosa PAO1, section 87 of 529 of the complete genome
          Length = 11161

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 561  cgcagcacttccacggcctc 580
            ||||||||||||||||||||
Sbjct: 7424 cgcagcacttccacggcctc 7443
to top
>dbj|AP003916.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1634_H04
          Length = 151699

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 562   gcagcacttccacggcctcttctt 585
             |||||||| |||||||||||||||
Sbjct: 93746 gcagcactcccacggcctcttctt 93769
to top
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 525     agatcggcgggatggacctggtgc 548
               ||||||||| ||||||||||||||
Sbjct: 2511334 agatcggcgagatggacctggtgc 2511357
to top
>emb|AM055942.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ia
          Length = 1923819

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 263     cagacgcgacgggaagggcg 282
               ||||||||||||||||||||
Sbjct: 1215734 cagacgcgacgggaagggcg 1215753
to top
>gb|AE003696.3| Drosophila melanogaster chromosome 3R, section 34 of 118 of the complete
              sequence
          Length = 265467

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 580    cttcttgcccgccgccatgg 599
              ||||||||||||||||||||
Sbjct: 199055 cttcttgcccgccgccatgg 199036
to top
>dbj|AP000936.7| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-823O21, complete
             sequence
          Length = 219017

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 85    tccattttattttattctta 104
             ||||||||||||||||||||
Sbjct: 77224 tccattttattttattctta 77243
to top
>gb|AY526096.1| Mus musculus cardiac ankyrin repeat kinase isoform 2 mRNA, complete
           cds
          Length = 2752

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 562 gcagcacttccacggcctct 581
           ||||||||||||||||||||
Sbjct: 561 gcagcacttccacggcctct 542
to top
>gb|AY526095.1| Mus musculus cardiac ankyrin repeat kinase isoform 1 mRNA, complete
           cds
          Length = 3032

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 562 gcagcacttccacggcctct 581
           ||||||||||||||||||||
Sbjct: 561 gcagcacttccacggcctct 542
to top
>emb|AL844560.5| Mouse DNA sequence from clone RP23-334M9 on chromosome 2, complete
             sequence
          Length = 185066

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 85    tccattttattttattctta 104
             ||||||||||||||||||||
Sbjct: 23363 tccattttattttattctta 23344
to top
>gb|AC157662.2| Gallus gallus BAC clone CH261-183P12 from chromosome unknown, complete
              sequence
          Length = 205302

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 115    gtgctgcagcagggcaggaggaca 138
              ||||||||| ||||||||||||||
Sbjct: 151947 gtgctgcaggagggcaggaggaca 151970


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,797,035
Number of Sequences: 3902068
Number of extensions: 4797035
Number of successful extensions: 117857
Number of sequences better than 10.0: 81
Number of HSP's better than 10.0 without gapping: 81
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 117244
Number of HSP's gapped (non-prelim): 597
length of query: 603
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 580
effective length of database: 17,143,297,704
effective search space: 9943112668320
effective search space used: 9943112668320
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top