Clone Information

BLAST Search Result

Clone Name	rbags29m15
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	gb\|AY494984.1\| Triticum aestivum LON1 protease mRNA, complete cds	1049	0.0
2	gb\|DQ002905.1\| Oryza sativa (indica cultivar-group) lon protease...	317	3e-83
3	gb\|AY129070.1\| Oryza sativa (indica cultivar-group) Lon protease...	317	3e-83
4	dbj\|AK119169.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	317	3e-83
5	dbj\|AK061670.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	317	3e-83
6	gb\|AF385580.2\| Dichanthelium lanuginosum Lon protease (lon) mRNA...	264	3e-67
7	gb\|U85494.1\|ZMU85494 Zea mays LON1 protease (LON1) mRNA, complet...	242	1e-60
8	gb\|AY109454.1\| Zea mays CL1713_1 mRNA sequence	228	2e-56
9	dbj\|AP008215.1\| Oryza sativa (japonica cultivar-group) genomic D...	139	1e-29
10	dbj\|AP005092.3\| Oryza sativa (japonica cultivar-group) genomic D...	139	1e-29
11	dbj\|AP005314.2\| Oryza sativa (japonica cultivar-group) genomic D...	139	1e-29
12	dbj\|D85610.1\| Spinacia oleracea mRNA for ATP-dependent protease ...	84	7e-13
13	dbj\|AB026197.1\| Lithospermum erythrorhizon mitochondrial mRNA fo...	52	0.002
14	ref\|NM_124075.2\| Arabidopsis thaliana ATP binding / ATP-dependen...	50	0.010
15	gb\|BT010392.1\| Arabidopsis thaliana At5g47040 mRNA, complete cds	50	0.010
16	emb\|CR931737.1\| Medicago truncatula chromosome 5 clone mth2-65j2...	50	0.010
17	emb\|CR931736.1\| Medicago truncatula chromosome 5 clone mte1-84f2...	50	0.010
18	gb\|BT002374.1\| Arabidopsis thaliana Lon protease homolog 1 precu...	50	0.010
19	dbj\|AB013394.1\| Arabidopsis thaliana genomic DNA, chromosome 5, ...	50	0.010
20	gb\|AF033862.1\|AF033862 Arabidopsis thaliana Lon protease (LON) g...	50	0.010
21	gb\|CP000148.1\| Geobacter metallireducens GS-15, complete genome	42	2.4
22	gb\|AC140791.4\| Gallus gallus BAC clone TAM33-20G4 from chromosom...	42	2.4
23	dbj\|AP006700.1\| Lotus japonicus genomic DNA, chromosome 2, clone...	42	2.4
24	dbj\|AP004913.1\| Lotus japonicus genomic DNA, chromosome 5, clone...	42	2.4
25	gb\|AC125735.1\| Leishmania major strain Friedlin chromosome 3, co...	40	9.3
26	gb\|AE000665.1\|MMAE000665 Mus musculus TCR beta locus from bases ...	40	9.3
27	gb\|CP000010.1\| Burkholderia mallei ATCC 23344 chromosome 1, comp...	40	9.3
28	gb\|CP000124.1\| Burkholderia pseudomallei 1710b chromosome I, com...	40	9.3
29	gb\|AC117678.16\| Mus musculus chromosome 6, clone RP23-421M9, com...	40	9.3
30	emb\|CR962127.1\| Medicago truncatula chromosome 5 clone mth2-181n...	40	9.3
31	gb\|AC133571.47\| Medicago truncatula clone mth2-10h12, complete s...	40	9.3
32	emb\|AL354733.15\| Human DNA sequence from clone RP11-575L7 on chr...	40	9.3
33	gb\|AC175606.3\| Cavia porcellus clone CH234-500H3, complete sequence	40	9.3
34	emb\|BX571965.1\| Burkholderia pseudomallei strain K96243, chromos...	40	9.3
35	gb\|AF336378.1\| Mus musculus Kel blood group protein (Kel), epith...	40	9.3
36	dbj\|AP008208.1\| Oryza sativa (japonica cultivar-group) genomic D...	40	9.3
37	dbj\|AK176945.1\| Mus musculus cDNA, clone:Y0G0101B07, strand:minu...	40	9.3
38	dbj\|AP005630.3\| Oryza sativa (japonica cultivar-group) genomic D...	40	9.3
39	emb\|BX664628.5\| Zebrafish DNA sequence from clone CH211-147D7 in...	40	9.3
40	emb\|CT573053.1\| Medicago truncatula chromosome 5 clone mte1-8e5,...	40	9.3

>gb|AY494984.1| Triticum aestivum LON1 protease mRNA, complete cds
          Length = 3143

 Score = 1049 bits (529), Expect = 0.0
 Identities = 645/681 (94%), Gaps = 2/681 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    tggctgaaataggttacatatacacccaaaccgacaacaacaggtggatctccttgctac 60
            |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 3077 tggctgaaataggttacatatacacccaaaccgacaacaacaggtggacctccttgctac 3018

                                                                        
Query: 61   caataccaaaccgagcatagatagatgagcatccctctataaatacaagcacaaagaccg 120
            || || |||||||||||||||||||||||||||||||||||||||||| |||||||||| 
Sbjct: 3017 ca-tagcaaaccgagcatagatagatgagcatccctctataaatacaatcacaaagacca 2959

                                                                        
Query: 121  gagcagatctccctgccgcttttgtggatagcaagtacccatatacacattccgcatatt 180
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 2958 gagcagatctccctgccgcttttgtggatagcaagtatccatatacacattccgcatatt 2899

                                                                        
Query: 181  agcttaactgaattggacgagcgatgctggcgtcatgagatttcactccgatggagcaat 240
            ||||||||||| |||||||||| | ||||||||||||||||||| |||| | ||||||||
Sbjct: 2898 agcttaactgagttggacgagcaacgctggcgtcatgagatttcgctccaacggagcaat 2839

                                                                        
Query: 241  tgctcgcctacgctcagtcgctcgtttgtagatatctgggcagtgaatagcgacgaatct 300
            ||||||||||||||||  ||||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 2838 tgctcgcctacgctcaa-cgctcatttgtagatatctgggcggtgaatagcgacgaatct 2780

                                                                        
Query: 301  tcaaaacaggtacatggccaccgaggaaatactacatcaggcgccaattgggatttgtcc 360
            |||||||  ||| ||||||||||||||||| | |||||||||||||||||| ||||| ||
Sbjct: 2779 tcaaaacgagtaaatggccaccgaggaaatgccacatcaggcgccaattggtatttgccc 2720

                                                                        
Query: 361  gtgctatagactggagtgtagcctcaaagggaatccattctcaaaagcatggccaagtac 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2719 gtgctatagactggagtgtagcctcaaagggaatccattctcaaaagcatggccaagtac 2660

                                                                        
Query: 421  ttcctcgatgcgcttcacgagcagaatctcaatgccagcgaggatcggtgctggaatctc 480
            |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 2659 ttcctcaatgcgcttcacgagcagaatctcaatgccagcgaggatcggagctggaatctc 2600

                                                                        
Query: 481  agccaagtccttcaagtttctttctggtaatatcaccctcttgatgccatatcgatgtgc 540
            ||||||||||||||||||||||||||||||||| || |||||||||||||||||||| ||
Sbjct: 2599 agccaagtccttcaagtttctttctggtaatattactctcttgatgccatatcgatgcgc 2540

                                                                        
Query: 541  agcaagcaccttgtccttaacaccaccaactggcaacactaggcccctaagagtcatctc 600
            |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2539 agcaagcaccttatccttaacaccaccaactggcaacactaggcccctaagagtcatctc 2480

                                                                        
Query: 601  tccggtcattgcagtgtctgctctcacttttcggttactgaacaacgacaccagtgatgt 660
            ||| |||||||||||||||||||| ||||| |||||||| ||||| ||||| ||||||||
Sbjct: 2479 tcctgtcattgcagtgtctgctctgactttccggttactaaacaatgacactagtgatgt 2420

                                 
Query: 661  taccaatgtcactcctgcaga 681
            ||||||||| |||||||||||
Sbjct: 2419 taccaatgtgactcctgcaga 2399

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>gb|DQ002905.1| Oryza sativa (indica cultivar-group) lon protease lon1a (lon1) mRNA,
            complete sequence, alternatively spliced
          Length = 2986

 Score =  317 bits (160), Expect = 3e-83
 Identities = 280/320 (87%)
 Strand = Plus / Minus

                                                                        
Query: 362  tgctatagactggagtgtagcctcaaagggaatccattctcaaaagcatggccaagtact 421
            ||||||||  |||||||| | |||| |||| |||||   |||||||||||| ||||||||
Sbjct: 2848 tgctatagcttggagtgtggtctcagagggcatccaccttcaaaagcatggtcaagtact 2789

                                                                        
Query: 422  tcctcgatgcgcttcacgagcagaatctcaatgccagcgaggatcggtgctggaatctca 481
            ||||||||||||||||| ||||||||||| | ||||| ||| || |||||||||| ||||
Sbjct: 2788 tcctcgatgcgcttcacaagcagaatctccaagccagagagaatgggtgctggaacctca 2729

                                                                        
Query: 482  gccaagtccttcaagtttctttctggtaatatcaccctcttgatgccatatcgatgtgca 541
            ||||||||||||| |||||||||||| ||||| || |||||||||||||||| |||||| 
Sbjct: 2728 gccaagtccttcatgtttctttctggcaatattactctcttgatgccatatctatgtgct 2669

                                                                        
Query: 542  gcaagcaccttgtccttaacaccaccaactggcaacactaggcccctaagagtcatctct 601
            ||||| ||||| ||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 2668 gcaagtaccttatccttaacaccgccaactggcaacacaaggcccctaagagtcatctct 2609

                                                                        
Query: 602  ccggtcattgcagtgtctgctctcacttttcggttactgaacaacgacaccagtgatgtt 661
            || ||||| |||||||| ||||| ||||||||||  || || |  ||||| | |||||||
Sbjct: 2608 cccgtcatagcagtgtcagctctgacttttcggtggctaaatagtgacactaatgatgtt 2549

                                
Query: 662  accaatgtcactcctgcaga 681
            |||||||||||||| |||||
Sbjct: 2548 accaatgtcactccagcaga 2529

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>gb|AY129070.1| Oryza sativa (indica cultivar-group) Lon protease (Lon1) mRNA,
            complete cds
          Length = 2908

 Score =  317 bits (160), Expect = 3e-83
 Identities = 280/320 (87%)
 Strand = Plus / Minus

                                                                        
Query: 362  tgctatagactggagtgtagcctcaaagggaatccattctcaaaagcatggccaagtact 421
            ||||||||  |||||||| | |||| |||| |||||   |||||||||||| ||||||||
Sbjct: 2770 tgctatagcttggagtgtggtctcagagggcatccaccttcaaaagcatggtcaagtact 2711

                                                                        
Query: 422  tcctcgatgcgcttcacgagcagaatctcaatgccagcgaggatcggtgctggaatctca 481
            ||||||||||||||||| ||||||||||| | ||||| ||| || |||||||||| ||||
Sbjct: 2710 tcctcgatgcgcttcacaagcagaatctccaagccagagagaatgggtgctggaacctca 2651

                                                                        
Query: 482  gccaagtccttcaagtttctttctggtaatatcaccctcttgatgccatatcgatgtgca 541
            ||||||||||||| |||||||||||| ||||| || |||||||||||||||| |||||| 
Sbjct: 2650 gccaagtccttcatgtttctttctggcaatattactctcttgatgccatatctatgtgct 2591

                                                                        
Query: 542  gcaagcaccttgtccttaacaccaccaactggcaacactaggcccctaagagtcatctct 601
            ||||| ||||| ||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 2590 gcaagtaccttatccttaacaccgccaactggcaacacaaggcccctaagagtcatctct 2531

                                                                        
Query: 602  ccggtcattgcagtgtctgctctcacttttcggttactgaacaacgacaccagtgatgtt 661
            || ||||| |||||||| ||||| ||||||||||  || || |  ||||| | |||||||
Sbjct: 2530 cccgtcatagcagtgtcagctctgacttttcggtggctaaatagtgacactaatgatgtt 2471

                                
Query: 662  accaatgtcactcctgcaga 681
            |||||||||||||| |||||
Sbjct: 2470 accaatgtcactccagcaga 2451

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>dbj|AK119169.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-G01, full
           insert sequence
          Length = 1299

 Score =  317 bits (160), Expect = 3e-83
 Identities = 280/320 (87%)
 Strand = Plus / Minus

                                                                       
Query: 362 tgctatagactggagtgtagcctcaaagggaatccattctcaaaagcatggccaagtact 421
           ||||||||  |||||||| | |||| |||| |||||   |||||||||||| ||||||||
Sbjct: 900 tgctatagcttggagtgtggtctcagagggcatccaccttcaaaagcatggtcaagtact 841

                                                                       
Query: 422 tcctcgatgcgcttcacgagcagaatctcaatgccagcgaggatcggtgctggaatctca 481
           ||||||||||||||||| ||||||||||| | ||||| ||| || |||||||||| ||||
Sbjct: 840 tcctcgatgcgcttcacaagcagaatctccaagccagagagaatgggtgctggaacctca 781

                                                                       
Query: 482 gccaagtccttcaagtttctttctggtaatatcaccctcttgatgccatatcgatgtgca 541
           ||||||||||||| |||||||||||| ||||| || |||||||||||||||| |||||| 
Sbjct: 780 gccaagtccttcatgtttctttctggcaatattactctcttgatgccatatctatgtgct 721

                                                                       
Query: 542 gcaagcaccttgtccttaacaccaccaactggcaacactaggcccctaagagtcatctct 601
           ||||| ||||| ||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 720 gcaagtaccttatccttaacaccgccaactggcaacacaaggcccctaagagtcatctct 661

                                                                       
Query: 602 ccggtcattgcagtgtctgctctcacttttcggttactgaacaacgacaccagtgatgtt 661
           || ||||| |||||||| ||||| ||||||||||  || || |  ||||| | |||||||
Sbjct: 660 cccgtcatagcagtgtcagctctgacttttcggtggctaaatagtgacactaatgatgtt 601

                               
Query: 662 accaatgtcactcctgcaga 681
           |||||||||||||| |||||
Sbjct: 600 accaatgtcactccagcaga 581

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>dbj|AK061670.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-G02, full
           insert sequence
          Length = 1299

 Score =  317 bits (160), Expect = 3e-83
 Identities = 280/320 (87%)
 Strand = Plus / Minus

                                                                       
Query: 362 tgctatagactggagtgtagcctcaaagggaatccattctcaaaagcatggccaagtact 421
           ||||||||  |||||||| | |||| |||| |||||   |||||||||||| ||||||||
Sbjct: 900 tgctatagcttggagtgtggtctcagagggcatccaccttcaaaagcatggtcaagtact 841

                                                                       
Query: 422 tcctcgatgcgcttcacgagcagaatctcaatgccagcgaggatcggtgctggaatctca 481
           ||||||||||||||||| ||||||||||| | ||||| ||| || |||||||||| ||||
Sbjct: 840 tcctcgatgcgcttcacaagcagaatctccaagccagagagaatgggtgctggaacctca 781

                                                                       
Query: 482 gccaagtccttcaagtttctttctggtaatatcaccctcttgatgccatatcgatgtgca 541
           ||||||||||||| |||||||||||| ||||| || |||||||||||||||| |||||| 
Sbjct: 780 gccaagtccttcatgtttctttctggcaatattactctcttgatgccatatctatgtgct 721

                                                                       
Query: 542 gcaagcaccttgtccttaacaccaccaactggcaacactaggcccctaagagtcatctct 601
           ||||| ||||| ||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 720 gcaagtaccttatccttaacaccgccaactggcaacacaaggcccctaagagtcatctct 661

                                                                       
Query: 602 ccggtcattgcagtgtctgctctcacttttcggttactgaacaacgacaccagtgatgtt 661
           || ||||| |||||||| ||||| ||||||||||  || || |  ||||| | |||||||
Sbjct: 660 cccgtcatagcagtgtcagctctgacttttcggtggctaaatagtgacactaatgatgtt 601

                               
Query: 662 accaatgtcactcctgcaga 681
           |||||||||||||| |||||
Sbjct: 600 accaatgtcactccagcaga 581

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>gb|AF385580.2| Dichanthelium lanuginosum Lon protease (lon) mRNA, complete cds
          Length = 3207

 Score =  264 bits (133), Expect = 3e-67
 Identities = 244/281 (86%)
 Strand = Plus / Minus

                                                                        
Query: 401  tcaaaagcatggccaagtacttcctcgatgcgcttcacgagcagaatctcaatgccagcg 460
            |||||||| ||| |||||||||||||||||||||| || ||||||||||| ||||||| |
Sbjct: 2640 tcaaaagcgtggtcaagtacttcctcgatgcgcttaacaagcagaatctccatgccagag 2581

                                                                        
Query: 461  aggatcggtgctggaatctcagccaagtccttcaagtttctttctggtaatatcaccctc 520
            || || ||||  |||| ||||| ||||||||||||||| ||||| || || || || |||
Sbjct: 2580 agaatgggtgagggaacctcagtcaagtccttcaagttcctttcaggcaaaattactctc 2521

                                                                        
Query: 521  ttgatgccatatcgatgtgcagcaagcaccttgtccttaacaccaccaactggcaacact 580
            ||||| ||||| |||||||| ||||| ||||| || ||||||||||||||||||||||| 
Sbjct: 2520 ttgattccataacgatgtgccgcaagtaccttatctttaacaccaccaactggcaacaca 2461

                                                                        
Query: 581  aggcccctaagagtcatctctccggtcattgcagtgtctgctctcacttttcggttactg 640
            |||||||| |||||||||||||| ||||| ||||| |||||||| ||||||| |||||| 
Sbjct: 2460 aggccccttagagtcatctctcctgtcatagcagtatctgctctgacttttctgttacta 2401

                                                     
Query: 641  aacaacgacaccagtgatgttaccaatgtcactcctgcaga 681
            || |  || |||||||| |||||||||||||||||||||||
Sbjct: 2400 aaaagtgataccagtgacgttaccaatgtcactcctgcaga 2360

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>gb|U85494.1|ZMU85494 Zea mays LON1 protease (LON1) mRNA, complete cds
          Length = 3217

 Score =  242 bits (122), Expect = 1e-60
 Identities = 239/278 (85%)
 Strand = Plus / Minus

                                                                        
Query: 404  aaagcatggccaagtacttcctcgatgcgcttcacgagcagaatctcaatgccagcgagg 463
            ||||||||| | ||||||||||||||||||||||| ||||||||||| ||| | | ||| 
Sbjct: 2741 aaagcatggtcgagtacttcctcgatgcgcttcacaagcagaatctccatgtcggagaga 2682

                                                                        
Query: 464  atcggtgctggaatctcagccaagtccttcaagtttctttctggtaatatcaccctcttg 523
            || |||  ||||| ||| |  |||||||||||||| ||||| ||||| || || ||||||
Sbjct: 2681 attggtaatggaacctctgataagtccttcaagttcctttcaggtaaaattactctcttg 2622

                                                                        
Query: 524  atgccatatcgatgtgcagcaagcaccttgtccttaacaccaccaactggcaacactagg 583
            || ||||| |||||||| ||||| ||||||||||||||||||||||||||||| || |||
Sbjct: 2621 attccataacgatgtgccgcaagtaccttgtccttaacaccaccaactggcaatacaagg 2562

                                                                        
Query: 584  cccctaagagtcatctctccggtcattgcagtgtctgctctcacttttcggttactgaac 643
            ||||| ||||||||||| || ||||| ||||| |||||||| ||||||| |||||| || 
Sbjct: 2561 ccccttagagtcatctcgccagtcatagcagtatctgctctgacttttctgttactaaaa 2502

                                                  
Query: 644  aacgacaccagtgatgttaccaatgtcactcctgcaga 681
            | |||||||||||  |||||||||||||| ||||||||
Sbjct: 2501 agcgacaccagtgccgttaccaatgtcacacctgcaga 2464

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>gb|AY109454.1| Zea mays CL1713_1 mRNA sequence
          Length = 3184

 Score =  228 bits (115), Expect = 2e-56
 Identities = 236/278 (84%)
 Strand = Plus / Minus

                                                                        
Query: 404  aaagcatggccaagtacttcctcgatgcgcttcacgagcagaatctcaatgccagcgagg 463
            ||||||||| | ||||||||||||||||||||||| ||||||||||| ||| | | ||| 
Sbjct: 2741 aaagcatggtcgagtacttcctcgatgcgcttcacaagcagaatctccatgtcggagaga 2682

                                                                        
Query: 464  atcggtgctggaatctcagccaagtccttcaagtttctttctggtaatatcaccctcttg 523
            || |||  ||||| ||| |  |||||||||||||| ||||| ||||| || || ||||||
Sbjct: 2681 attggtaatggaacctctgataagtccttcaagttcctttcaggtaaaattactctcttg 2622

                                                                        
Query: 524  atgccatatcgatgtgcagcaagcaccttgtccttaacaccaccaactggcaacactagg 583
            || ||||| |||||||| ||||| ||||||||||||||||||||||||||||| || |||
Sbjct: 2621 attccataacgatgtgccgcaagtaccttgtccttaacaccaccaactggcaatacaagg 2562

                                                                        
Query: 584  cccctaagagtcatctctccggtcattgcagtgtctgctctcacttttcggttactgaac 643
            ||||| ||||||||||| || ||||| ||||| |||||||| ||||||| ||||||    
Sbjct: 2561 ccccttagagtcatctcgccagtcatagcagtatctgctctgacttttctgttactnnnn 2502

                                                  
Query: 644  aacgacaccagtgatgttaccaatgtcactcctgcaga 681
              |||||||||||  |||||||||||||| ||||||||
Sbjct: 2501 ngcgacaccagtgccgttaccaatgtcacacctgcaga 2464

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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  139 bits (70), Expect = 1e-29
 Identities = 118/134 (88%)
 Strand = Plus / Plus

                                                                            
Query: 548      accttgtccttaacaccaccaactggcaacactaggcccctaagagtcatctctccggtc 607
                ||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 20645581 accttatccttaacaccgccaactggcaacacaaggcccctaagagtcatctctcccgtc 20645640

                                                                            
Query: 608      attgcagtgtctgctctcacttttcggttactgaacaacgacaccagtgatgttaccaat 667
                || |||||||| ||||| ||||||||||  || || |  ||||| | |||||||||||||
Sbjct: 20645641 atagcagtgtcagctctgacttttcggtggctaaatagtgacactaatgatgttaccaat 20645700

                              
Query: 668      gtcactcctgcaga 681
                |||||||| |||||
Sbjct: 20645701 gtcactccagcaga 20645714



 Score =  107 bits (54), Expect = 5e-20
 Identities = 87/98 (88%)
 Strand = Plus / Plus

                                                                            
Query: 454      gccagcgaggatcggtgctggaatctcagccaagtccttcaagtttctttctggtaatat 513
                ||||| ||| || |||||||||| ||||||||||||||||| |||||||||||| |||||
Sbjct: 20645371 gccagagagaatgggtgctggaacctcagccaagtccttcatgtttctttctggcaatat 20645430

                                                      
Query: 514      caccctcttgatgccatatcgatgtgcagcaagcacct 551
                 || |||||||||||||||| |||||| ||||| ||||
Sbjct: 20645431 tactctcttgatgccatatctatgtgctgcaagtacct 20645468



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 77/88 (87%)
 Strand = Plus / Plus

                                                                            
Query: 362      tgctatagactggagtgtagcctcaaagggaatccattctcaaaagcatggccaagtact 421
                ||||||||  |||||||| | |||| |||| |||||   |||||||||||| ||||||||
Sbjct: 20645010 tgctatagcttggagtgtggtctcagagggcatccaccttcaaaagcatggtcaagtact 20645069

                                            
Query: 422      tcctcgatgcgcttcacgagcagaatct 449
                ||||||||||||||||| ||||||||||
Sbjct: 20645070 tcctcgatgcgcttcacaagcagaatct 20645097

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>dbj|AP005092.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1112_E07
          Length = 132055

 Score =  139 bits (70), Expect = 1e-29
 Identities = 118/134 (88%)
 Strand = Plus / Plus

                                                                         
Query: 548   accttgtccttaacaccaccaactggcaacactaggcccctaagagtcatctctccggtc 607
             ||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 39192 accttatccttaacaccgccaactggcaacacaaggcccctaagagtcatctctcccgtc 39251

                                                                         
Query: 608   attgcagtgtctgctctcacttttcggttactgaacaacgacaccagtgatgttaccaat 667
             || |||||||| ||||| ||||||||||  || || |  ||||| | |||||||||||||
Sbjct: 39252 atagcagtgtcagctctgacttttcggtggctaaatagtgacactaatgatgttaccaat 39311

                           
Query: 668   gtcactcctgcaga 681
             |||||||| |||||
Sbjct: 39312 gtcactccagcaga 39325



 Score =  107 bits (54), Expect = 5e-20
 Identities = 87/98 (88%)
 Strand = Plus / Plus

                                                                         
Query: 454   gccagcgaggatcggtgctggaatctcagccaagtccttcaagtttctttctggtaatat 513
             ||||| ||| || |||||||||| ||||||||||||||||| |||||||||||| |||||
Sbjct: 38982 gccagagagaatgggtgctggaacctcagccaagtccttcatgtttctttctggcaatat 39041

                                                   
Query: 514   caccctcttgatgccatatcgatgtgcagcaagcacct 551
              || |||||||||||||||| |||||| ||||| ||||
Sbjct: 39042 tactctcttgatgccatatctatgtgctgcaagtacct 39079



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 77/88 (87%)
 Strand = Plus / Plus

                                                                         
Query: 362   tgctatagactggagtgtagcctcaaagggaatccattctcaaaagcatggccaagtact 421
             ||||||||  |||||||| | |||| |||| |||||   |||||||||||| ||||||||
Sbjct: 38621 tgctatagcttggagtgtggtctcagagggcatccaccttcaaaagcatggtcaagtact 38680

                                         
Query: 422   tcctcgatgcgcttcacgagcagaatct 449
             ||||||||||||||||| ||||||||||
Sbjct: 38681 tcctcgatgcgcttcacaagcagaatct 38708

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>dbj|AP005314.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0515E01
          Length = 140063

 Score =  139 bits (70), Expect = 1e-29
 Identities = 118/134 (88%)
 Strand = Plus / Plus

                                                                          
Query: 548    accttgtccttaacaccaccaactggcaacactaggcccctaagagtcatctctccggtc 607
              ||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 111239 accttatccttaacaccgccaactggcaacacaaggcccctaagagtcatctctcccgtc 111298

                                                                          
Query: 608    attgcagtgtctgctctcacttttcggttactgaacaacgacaccagtgatgttaccaat 667
              || |||||||| ||||| ||||||||||  || || |  ||||| | |||||||||||||
Sbjct: 111299 atagcagtgtcagctctgacttttcggtggctaaatagtgacactaatgatgttaccaat 111358

                            
Query: 668    gtcactcctgcaga 681
              |||||||| |||||
Sbjct: 111359 gtcactccagcaga 111372



 Score =  107 bits (54), Expect = 5e-20
 Identities = 87/98 (88%)
 Strand = Plus / Plus

                                                                          
Query: 454    gccagcgaggatcggtgctggaatctcagccaagtccttcaagtttctttctggtaatat 513
              ||||| ||| || |||||||||| ||||||||||||||||| |||||||||||| |||||
Sbjct: 111029 gccagagagaatgggtgctggaacctcagccaagtccttcatgtttctttctggcaatat 111088

                                                    
Query: 514    caccctcttgatgccatatcgatgtgcagcaagcacct 551
               || |||||||||||||||| |||||| ||||| ||||
Sbjct: 111089 tactctcttgatgccatatctatgtgctgcaagtacct 111126



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 77/88 (87%)
 Strand = Plus / Plus

                                                                          
Query: 362    tgctatagactggagtgtagcctcaaagggaatccattctcaaaagcatggccaagtact 421
              ||||||||  |||||||| | |||| |||| |||||   |||||||||||| ||||||||
Sbjct: 110668 tgctatagcttggagtgtggtctcagagggcatccaccttcaaaagcatggtcaagtact 110727

                                          
Query: 422    tcctcgatgcgcttcacgagcagaatct 449
              ||||||||||||||||| ||||||||||
Sbjct: 110728 tcctcgatgcgcttcacaagcagaatct 110755

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>dbj|D85610.1| Spinacia oleracea mRNA for ATP-dependent protease Lon, complete cds
          Length = 3101

 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 99/118 (83%)
 Strand = Plus / Minus

                                                                        
Query: 509  aatatcaccctcttgatgccatatcgatgtgcagcaagcaccttgtccttaacaccacca 568
            ||||| || ||||| || ||||| |||||||| || |||||||| |||||||||||||||
Sbjct: 2635 aatatgactctctttataccataccgatgtgctgccagcaccttatccttaacaccacca 2576

                                                                      
Query: 569  actggcaacactaggcccctaagagtcatctctccggtcattgcagtgtctgctctca 626
            || |||| ||| |||||||| | ||||||||| || ||||| || || || |||||||
Sbjct: 2575 acaggcagcacaaggcccctcaaagtcatctccccagtcatagctgtatcagctctca 2518

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>dbj|AB026197.1| Lithospermum erythrorhizon mitochondrial mRNA for LON protease
           homologue, partial cds
          Length = 1002

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                     
Query: 482 gccaagtccttcaagtttctttctgg 507
           ||||||||||||||||||||||||||
Sbjct: 551 gccaagtccttcaagtttctttctgg 526

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>ref|NM_124075.2| Arabidopsis thaliana ATP binding / ATP-dependent peptidase/
            nucleoside-triphosphatase/ nucleotide binding /
            serine-type endopeptidase/ serine-type p> AT5G47040 mRNA,
            complete cds
          Length = 2704

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 73/89 (82%)
 Strand = Plus / Minus

                                                                        
Query: 593  gtcatctctccggtcattgcagtgtctgctctcacttttcggttactgaacaacgacacc 652
            ||||||||||||||||| || ||||||||||| |||  |   | |||||||||||| |||
Sbjct: 2472 gtcatctctccggtcatggctgtgtctgctctaactcgtttctgactgaacaacgaaacc 2413

                                         
Query: 653  agtgatgttaccaatgtcactcctgcaga 681
            |  | ||| ||||| |||||||| |||||
Sbjct: 2412 aaagctgtcaccaaagtcactcccgcaga 2384

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>gb|BT010392.1| Arabidopsis thaliana At5g47040 mRNA, complete cds
          Length = 1674

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 73/89 (82%)
 Strand = Plus / Minus

                                                                        
Query: 593  gtcatctctccggtcattgcagtgtctgctctcacttttcggttactgaacaacgacacc 652
            ||||||||||||||||| || ||||||||||| |||  |   | |||||||||||| |||
Sbjct: 1442 gtcatctctccggtcatggctgtgtctgctctaactcgtttctgactgaacaacgaaacc 1383

                                         
Query: 653  agtgatgttaccaatgtcactcctgcaga 681
            |  | ||| ||||| |||||||| |||||
Sbjct: 1382 aaagctgtcaccaaagtcactcccgcaga 1354

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>emb|CR931737.1| Medicago truncatula chromosome 5 clone mth2-65j24, COMPLETE SEQUENCE
          Length = 126498

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 52/61 (85%)
 Strand = Plus / Minus

                                                                         
Query: 483   ccaagtccttcaagtttctttctggtaatatcaccctcttgatgccatatcgatgtgcag 542
             |||||||||| ||||| ||||| ||||  || || ||||| || ||||||||||||||||
Sbjct: 27941 ccaagtcctttaagttcctttcaggtaggatgactctcttaataccatatcgatgtgcag 27882

              
Query: 543   c 543
             |
Sbjct: 27881 c 27881



 Score = 42.1 bits (21), Expect = 2.4
 Identities = 69/85 (81%)
 Strand = Plus / Minus

                                                                         
Query: 548   accttgtccttaacaccaccaactggcaacactaggcccctaagagtcatctctccggtc 607
             ||||| ||||| | ||||||||| || |  ||||| ||||| | |||||||||||| |||
Sbjct: 27128 accttatccttgataccaccaacaggtagtactagacccctcaaagtcatctctccagtc 27069

                                      
Query: 608   attgcagtgtctgctctcacttttc 632
             || || || || | |||||||||||
Sbjct: 27068 atagcggtatcagatctcacttttc 27044

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>emb|CR931736.1| Medicago truncatula chromosome 5 clone mte1-84f20, COMPLETE SEQUENCE
          Length = 149149

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 52/61 (85%)
 Strand = Plus / Minus

                                                                          
Query: 483    ccaagtccttcaagtttctttctggtaatatcaccctcttgatgccatatcgatgtgcag 542
              |||||||||| ||||| ||||| ||||  || || ||||| || ||||||||||||||||
Sbjct: 148230 ccaagtcctttaagttcctttcaggtaggatgactctcttaataccatatcgatgtgcag 148171

               
Query: 543    c 543
              |
Sbjct: 148170 c 148170



 Score = 42.1 bits (21), Expect = 2.4
 Identities = 69/85 (81%)
 Strand = Plus / Minus

                                                                          
Query: 548    accttgtccttaacaccaccaactggcaacactaggcccctaagagtcatctctccggtc 607
              ||||| ||||| | ||||||||| || |  ||||| ||||| | |||||||||||| |||
Sbjct: 147417 accttatccttgataccaccaacaggtagtactagacccctcaaagtcatctctccagtc 147358

                                       
Query: 608    attgcagtgtctgctctcacttttc 632
              || || || || | |||||||||||
Sbjct: 147357 atagcggtatcagatctcacttttc 147333

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>gb|BT002374.1| Arabidopsis thaliana Lon protease homolog 1 precursor (At5g47040)
            mRNA, complete cds
          Length = 1917

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 73/89 (82%)
 Strand = Plus / Minus

                                                                        
Query: 593  gtcatctctccggtcattgcagtgtctgctctcacttttcggttactgaacaacgacacc 652
            ||||||||||||||||| || ||||||||||| |||  |   | |||||||||||| |||
Sbjct: 1489 gtcatctctccggtcatggctgtgtctgctctaactcgtttctgactgaacaacgaaacc 1430

                                         
Query: 653  agtgatgttaccaatgtcactcctgcaga 681
            |  | ||| ||||| |||||||| |||||
Sbjct: 1429 aaagctgtcaccaaagtcactcccgcaga 1401

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>dbj|AB013394.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MQD22
          Length = 85661

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 73/89 (82%)
 Strand = Plus / Plus

                                                                         
Query: 593   gtcatctctccggtcattgcagtgtctgctctcacttttcggttactgaacaacgacacc 652
             ||||||||||||||||| || ||||||||||| |||  |   | |||||||||||| |||
Sbjct: 62423 gtcatctctccggtcatggctgtgtctgctctaactcgtttctgactgaacaacgaaacc 62482

                                          
Query: 653   agtgatgttaccaatgtcactcctgcaga 681
             |  | ||| ||||| |||||||| |||||
Sbjct: 62483 aaagctgtcaccaaagtcactcccgcaga 62511

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>gb|AF033862.1|AF033862 Arabidopsis thaliana Lon protease (LON) gene, complete cds
          Length = 6848

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 73/89 (82%)
 Strand = Plus / Minus

                                                                        
Query: 593  gtcatctctccggtcattgcagtgtctgctctcacttttcggttactgaacaacgacacc 652
            ||||||||||||||||| || ||||||||||| |||  |   | |||||||||||| |||
Sbjct: 5989 gtcatctctccggtcatggctgtgtctgctctaactcgtttctgactgaacaacgaaacc 5930

                                         
Query: 653  agtgatgttaccaatgtcactcctgcaga 681
            |  | ||| ||||| |||||||| |||||
Sbjct: 5929 aaagctgtcaccaaagtcactcccgcaga 5901

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>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 422    tcctcgatgcgcttcacgagc 442
              |||||||||||||||||||||
Sbjct: 694074 tcctcgatgcgcttcacgagc 694054

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>gb|AC140791.4| Gallus gallus BAC clone TAM33-20G4 from chromosome ul, complete
            sequence
          Length = 219854

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 77   atagatagatgagcatccctc 97
            |||||||||||||||||||||
Sbjct: 6522 atagatagatgagcatccctc 6502

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>dbj|AP006700.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT17H09, TM0550,
             complete sequence
          Length = 76403

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 51/61 (83%)
 Strand = Plus / Minus

                                                                         
Query: 483   ccaagtccttcaagtttctttctggtaatatcaccctcttgatgccatatcgatgtgcag 542
             |||||||||||||||| ||||| ||||  || || ||||| || ||| ||||||| ||||
Sbjct: 61590 ccaagtccttcaagttcctttcaggtatgatgactctcttaataccacatcgatgggcag 61531

              
Query: 543   c 543
             |
Sbjct: 61530 c 61530

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>dbj|AP004913.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT02A14, TM0072a,
            complete sequence
          Length = 100740

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 163  atacacattccgcatattagcttaa 187
            |||||||||||||||||||| ||||
Sbjct: 4022 atacacattccgcatattagattaa 4046

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>gb|AC125735.1| Leishmania major strain Friedlin chromosome 3, complete sequence
          Length = 384518

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 419   acttcctcgatgcgcttcac 438
             ||||||||||||||||||||
Sbjct: 53060 acttcctcgatgcgcttcac 53041

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>gb|AE000665.1|MMAE000665 Mus musculus TCR beta locus from bases 501860 to 700960 (section 3 of 3)
              of the complete sequence
          Length = 199101

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 138    gcttttgtggatagcaagta 157
              ||||||||||||||||||||
Sbjct: 194392 gcttttgtggatagcaagta 194373

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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 420     cttcctcgatgcgcttcacg 439
               ||||||||||||||||||||
Sbjct: 1894051 cttcctcgatgcgcttcacg 1894070

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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 420     cttcctcgatgcgcttcacg 439
               ||||||||||||||||||||
Sbjct: 1535845 cttcctcgatgcgcttcacg 1535826

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>gb|AC117678.16| Mus musculus chromosome 6, clone RP23-421M9, complete sequence
          Length = 204437

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 138   gcttttgtggatagcaagta 157
             ||||||||||||||||||||
Sbjct: 96556 gcttttgtggatagcaagta 96537

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>emb|CR962127.1| Medicago truncatula chromosome 5 clone mth2-181n9, COMPLETE SEQUENCE
          Length = 119528

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 94   cctctataaatacaagcaca 113
            ||||||||||||||||||||
Sbjct: 9634 cctctataaatacaagcaca 9615

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>gb|AC133571.47| Medicago truncatula clone mth2-10h12, complete sequence
          Length = 85905

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 94    cctctataaatacaagcaca 113
             ||||||||||||||||||||
Sbjct: 64740 cctctataaatacaagcaca 64759



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 94    cctctataaatacaagcaca 113
             ||||||||||||||||||||
Sbjct: 55200 cctctataaatacaagcaca 55219

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>emb|AL354733.15| Human DNA sequence from clone RP11-575L7 on chromosome 9 Contains the 5'
              end of the gene for protein kinase anchoring protein GKAP42
              (FKSG21), a novel gene (DKFZp43D0917), a novel gene
              (MGC10999), the HNRPK gene for heterogeneous nuclear
              ribonucleoprotein K (CSBP, TUNP, HNRNPK), three novel
              genes, the 5' UTR of a novel gene (FLJ12888) and six CpG
              islands, complete sequence
          Length = 189579

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 504    ctggtaatatcaccctcttg 523
              ||||||||||||||||||||
Sbjct: 160495 ctggtaatatcaccctcttg 160514

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>gb|AC175606.3| Cavia porcellus clone CH234-500H3, complete sequence
          Length = 94354

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 508   taatatcaccctcttgatgc 527
             ||||||||||||||||||||
Sbjct: 10824 taatatcaccctcttgatgc 10805

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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 420     cttcctcgatgcgcttcacg 439
               ||||||||||||||||||||
Sbjct: 1422933 cttcctcgatgcgcttcacg 1422914

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>gb|AF336378.1| Mus musculus Kel blood group protein (Kel), epithelial calcium channel 1
              (Ecac1), epithelial calcium channel 2 (Ecac2), and ephrin
              type A receptor (Mep) genes, complete cds; and T cell
              receptor beta chain (Tcr) gene, partial cds
          Length = 169781

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 138    gcttttgtggatagcaagta 157
              ||||||||||||||||||||
Sbjct: 142129 gcttttgtggatagcaagta 142148

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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 530      tatcgatgtgcagcaagcaccttg 553
                |||||||||||||||| |||||||
Sbjct: 17750186 tatcgatgtgcagcaatcaccttg 17750163

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>dbj|AK176945.1| Mus musculus cDNA, clone:Y0G0101B07, strand:minus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000031445, based on BLAT search
          Length = 213

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 422 tcctcgatgcgcttcacgag 441
           ||||||||||||||||||||
Sbjct: 72  tcctcgatgcgcttcacgag 53

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>dbj|AP005630.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBb0021C10
          Length = 119527

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 530    tatcgatgtgcagcaagcaccttg 553
              |||||||||||||||| |||||||
Sbjct: 106200 tatcgatgtgcagcaatcaccttg 106177

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>emb|BX664628.5| Zebrafish DNA sequence from clone CH211-147D7 in linkage group 20,
             complete sequence
          Length = 101135

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 491   ttcaagtttctttctggtaa 510
             ||||||||||||||||||||
Sbjct: 14185 ttcaagtttctttctggtaa 14204

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>emb|CT573053.1| Medicago truncatula chromosome 5 clone mte1-8e5, COMPLETE SEQUENCE
          Length = 106640

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 94     cctctataaatacaagcaca 113
              ||||||||||||||||||||
Sbjct: 105678 cctctataaatacaagcaca 105659



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 94    cctctataaatacaagcaca 113
             ||||||||||||||||||||
Sbjct: 96032 cctctataaatacaagcaca 96013


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,064,422
Number of Sequences: 3902068
Number of extensions: 5064422
Number of successful extensions: 81080
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 80911
Number of HSP's gapped (non-prelim): 157
length of query: 681
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 658
effective length of database: 17,143,297,704
effective search space: 11280289889232
effective search space used: 11280289889232
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

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full-length cDNA and EST

Clone Information

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