>WUN1_SOLTU (P20144) Wound-induced protein 1|
          Length = 105

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 13/21 (61%), Positives = 16/21 (76%)
 Frame = -2

Query: 300 VWQSRRPDRARNSLPGLVLAL 238
           VW+S  P+R   S+PGLVLAL
Sbjct: 85  VWESSLPNRVGKSVPGLVLAL 105

>CFAI_RAT (Q9WUW3) Complement factor I precursor (EC 3.4.21.45) (C3B/C4B|
           inactivator) [Contains: Complement factor I heavy chain;
           Complement factor I light chain]
          Length = 604

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 14/51 (27%), Positives = 19/51 (37%)
 Frame = -3

Query: 173 RCCLSFFLHQPSPALLCSPWPSCFLFACLVNVRSIAE*PPTNRPVMATRRR 21
           +C L  + H     + C PW  C    C   +    + P    PV AT  R
Sbjct: 35  KCLLKNYTHHSCDKVFCQPWQKCIEGTCACKLP--YQCPKAGTPVCATNGR 83

>TRH_HUMAN (P20396) Thyroliberin precursor [Contains: Prothyroliberin;|
           Thyroliberin (Thyrotropin-releasing hormone) (TRH)
           (Thyrotropin-releasing factor) (TRF) (TSH-releasing
           factor) (Protirelin)]
          Length = 242

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 22/70 (31%), Positives = 29/70 (41%), Gaps = 11/70 (15%)
 Frame = +2

Query: 116 RESRAEQGMVDEERKKDSSVSPCVRPSGGRR--RPAWLGLGG*RARTRPGRE-------- 265
           RE   E+G+ +EE ++  +V P  R   GRR    +W        R  PGR         
Sbjct: 89  REEEEEEGVEEEEEEEGGAVGPHKRQHPGRREDEASWSVDVTQHKRQHPGRRSPWLAYAV 148

Query: 266 -LRARSGRRL 292
             R   GRRL
Sbjct: 149 PKRQHPGRRL 158

>RBM6_HUMAN (P78332) RNA-binding protein 6 (RNA-binding motif protein 6)|
            (RNA-binding protein DEF-3) (Lung cancer antigen
            NY-LU-12) (Protein G16)
          Length = 1123

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 14/40 (35%), Positives = 24/40 (60%)
 Frame = +2

Query: 113  ARESRAEQGMVDEERKKDSSVSPCVRPSGGRRRPAWLGLG 232
            +RE+ +++ +VD+E    SS   CV+ + G R+   LG G
Sbjct: 1034 SRETDSDRKLVDKEDIDTSSKGGCVQQATGWRKGTGLGYG 1073

>YSH1_YEAST (Q06224) Protein YSH1 (Yeast 73 kDa homolog 1)|
          Length = 779

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 12/20 (60%), Positives = 16/20 (80%)
 Frame = +2

Query: 119 ESRAEQGMVDEERKKDSSVS 178
           +S+AE+G+VDEE  KD  VS
Sbjct: 516 DSQAEKGLVDEEEHKDIVVS 535

>SHAN3_RAT (Q9JLU4) SH3 and multiple ankyrin repeat domains 3 (Shank3)|
            (Proline-rich synapse associated protein 2) (ProSAP2)
            (SPANK-2)
          Length = 1815

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = +2

Query: 161  KDSSVSPCVRPSGGRRRPAWLGLGG*RARTRPGRELR 271
            +DS   P   P+   R PAW+ +   R   +P RE R
Sbjct: 1226 RDSERGPLASPAFSPRSPAWIPVPARREAEKPTREER 1262

>SODE_MOUSE (O09164) Extracellular superoxide dismutase [Cu-Zn] precursor (EC|
           1.15.1.1) (EC-SOD)
          Length = 251

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +1

Query: 22  RRRVAITGRLVGGYSAMLRTFTRHANKKQLGQG 120
           R RV +T  L G ++ + R+   HA +  LG+G
Sbjct: 172 RHRVGLTASLAGPHAILGRSVVVHAGEDDLGKG 204

>ARNC_PHOLL (Q7N3Q6) Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose|
           transferase (EC 2.7.8.-) (Undecaprenyl-phosphate Ara4FN
           transferase) (Ara4FN transferase) (Polymyxin resistance
           protein pmrF)
          Length = 325

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +1

Query: 40  TGRLVGGYSAMLRTFTRHANKKQLGQGEQS 129
           TGR +G Y  MLR + RH  +  L   E+S
Sbjct: 151 TGRSMGDYGCMLRAYRRHIVEAMLQCHERS 180


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,330,422
Number of Sequences: 219361
Number of extensions: 619701
Number of successful extensions: 1671
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1621
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1671
length of database: 80,573,946
effective HSP length: 81
effective length of database: 62,805,705
effective search space used: 1507336920
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)