>YMA2_YEAST (Q04263) Hypothetical 84.6 kDa protein in GLO1-YPT7 intergenic|
           region
          Length = 737

 Score = 30.0 bits (66), Expect = 1.7
 Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
 Frame = +1

Query: 25  LHRCPDCF--LVDLRRSPRNFATDVACMRXELEVQXSYESNGHDGKDGKRDESPTDV 189
           LH+  +CF  L+ L++ P N  TD A +   + +  S  +    GK+  +   P ++
Sbjct: 462 LHQLTNCFNVLLFLKKIPENLFTDEASILYWMRINTSKRNQKPSGKENPKTMEPEEI 518

>Y677_TREPA (O83683) Hypothetical protein TP0677|
          Length = 202

 Score = 28.5 bits (62), Expect = 4.9
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +1

Query: 22  KLHRCPDCFLVDLRRSPRNFATDV 93
           ++H C DC +  +RR+ R FA DV
Sbjct: 45  QVHACVDCGMRGIRRAVRRFAADV 68

>NU6M_DIDMA (P41315) NADH-ubiquinone oxidoreductase chain 6 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 6)
          Length = 168

 Score = 28.5 bits (62), Expect = 4.9
 Identities = 10/27 (37%), Positives = 19/27 (70%)
 Frame = -1

Query: 219 FVTISYLLLLXISWRFVSLAIFPVMAI 139
           F+ + ++LLL + W F+S  ++ +MAI
Sbjct: 90  FIMLLFVLLLQVGWYFMSKLVYIIMAI 116

>BACS2_NATPH (P42196) Sensory rhodopsin-2 (Sensory rhodopsin II) (SR-II)|
          Length = 239

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 12/34 (35%), Positives = 22/34 (64%)
 Frame = -1

Query: 162 AIFPVMAIAFIGALYFKLXPHTGDISRKVTGRSS 61
           A+F + A+AF+G +Y+ + P T   S++ +G  S
Sbjct: 125 ALFGMGAVAFLGLVYYLVGPMTESASQRSSGIKS 158


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,118,405
Number of Sequences: 219361
Number of extensions: 346809
Number of successful extensions: 1575
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1550
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1575
length of database: 80,573,946
effective HSP length: 50
effective length of database: 69,605,896
effective search space used: 1670541504
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)