>SFRS1_ARATH (O22315) Pre-mRNA-splicing factor SF2 (SR1 protein)|
          Length = 303

 Score = 33.5 bits (75), Expect = 0.48
 Identities = 25/82 (30%), Positives = 40/82 (48%)
 Frame = -3

Query: 417 REGHAAGAQSLAFSESMRRRRRDIVTTSSSCCAQHIIVVTESAGTPPRSRAVRREPAKLD 238
           R+   + ++  ++S+S  R R   V+ S S         + S    P++++ RR PAK  
Sbjct: 198 RKDSRSPSRGRSYSKSRSRSRGRSVSRSRSR--------SRSRSRSPKAKSSRRSPAKST 249

Query: 237 NRRPSPRDMCYRAPHASRS*SR 172
           +R P PR    R+P   RS SR
Sbjct: 250 SRSPGPRSKS-RSPSPRRSRSR 270

>K1H7_HUMAN (O76014) Keratin, type I cuticular Ha7 (Hair keratin, type I Ha7)|
          Length = 449

 Score = 32.7 bits (73), Expect = 0.81
 Identities = 18/41 (43%), Positives = 23/41 (56%)
 Frame = +1

Query: 136 SVVTTGQNPLAEAGLAS*CVGGSVAHISR*RAAVVQLGRLS 258
           S +  G  P+AEA  AS C+  +VAH +R R     LGR S
Sbjct: 26  SPIDVGCQPVAEANAASMCLLANVAHANRVRVGSTPLGRPS 66

>DMPK_MOUSE (P54265) Myotonin-protein kinase (EC 2.7.11.1) (Myotonic dystrophy|
           protein kinase) (MDPK) (DM-kinase) (DMK) (DMPK) (MT-PK)
          Length = 631

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 15/31 (48%), Positives = 20/31 (64%)
 Frame = -1

Query: 209 ATEPPTHQEANPASANGFCPVVTTEGGGRLH 117
           AT+PP+H +  PA A G CP+V   G G +H
Sbjct: 545 ATDPPSHLDGPPAVAVGQCPLV---GPGPMH 572

>DMPK_HUMAN (Q09013) Myotonin-protein kinase (EC 2.7.11.1) (Myotonic dystrophy|
           protein kinase) (MDPK) (DM-kinase) (DMK) (DMPK) (MT-PK)
          Length = 639

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 15/31 (48%), Positives = 20/31 (64%)
 Frame = -1

Query: 209 ATEPPTHQEANPASANGFCPVVTTEGGGRLH 117
           AT+PP+H +  PA A G CP+V   G G +H
Sbjct: 553 ATDPPSHLDGPPAVAVGQCPLV---GPGPMH 580

>Y093_MYCTU (Q10890) Hypothetical protein Rv0093c/MT0102|
          Length = 282

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 7/66 (10%)
 Frame = +3

Query: 321 RNSWTTWSRCLVACDACSQRTLGTAP-------LQHGLPSGATRFLPLLTATWSPAQPVM 479
           ++S  TW R  + C   +Q  LGT         L H  P+GA   L   + +WS A  V+
Sbjct: 121 QHSPMTWRRWALLCVGIAQIALGTVQGFGLDVGLTHQHPTGAGTHLLNESTSWSIALGVI 180

Query: 480 VRGASV 497
           + GA++
Sbjct: 181 MVGAAL 186

>M3KL4_HUMAN (Q5TCX8) Mitogen-activated protein kinase kinase kinase (EC|
           2.7.11.25) (Mixed lineage kinase 4)
          Length = 1036

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 29/95 (30%), Positives = 39/95 (41%), Gaps = 9/95 (9%)
 Frame = -3

Query: 450 QSVAARTSSPQREGHAAGAQSLAFSESMRRRRR--------DIVTTSSSCCAQ-HIIVVT 298
           Q VA + +    E  AA A     +ES+RR  R        +I+     C  Q H+ +V 
Sbjct: 146 QEVAVKAARQDPEQDAAAA-----AESVRREARLFAMLRHPNIIELRGVCLQQPHLCLVL 200

Query: 297 ESAGTPPRSRAVRREPAKLDNRRPSPRDMCYRAPH 193
           E A     +RA+    A  D R P PR      PH
Sbjct: 201 EFARGGALNRALAAANAAPDPRAPGPRRARRIPPH 235

>K1H8_HUMAN (O76015) Keratin, type I cuticular Ha8 (Hair keratin, type I Ha8)|
          Length = 456

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 17/41 (41%), Positives = 22/41 (53%)
 Frame = +1

Query: 136 SVVTTGQNPLAEAGLAS*CVGGSVAHISR*RAAVVQLGRLS 258
           S +  G  P AEA +A  C+  +VAH +R R     LGR S
Sbjct: 26  SPIDIGCQPGAEANIAPMCLLANVAHANRVRVGSTPLGRPS 66

>NAS35_CAEEL (P98060) Zinc metalloproteinase nas-35 precursor (EC 3.4.24.21)|
           (Nematode astacin 35) (Dumpy protein 31) (Tollish
           protein 2)
          Length = 592

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +3

Query: 324 NSWTTWSRCLVACDACSQR 380
           NSW+ W+ C   C AC  R
Sbjct: 494 NSWSPWTACSATCGACGSR 512

>VE2_HPV5B (P26545) Regulatory protein E2|
          Length = 514

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 24/67 (35%), Positives = 29/67 (43%)
 Frame = -3

Query: 528 CRISSIQGHHRRSRLAPSLAEPGTM*QSVAARTSSPQREGHAAGAQSLAFSESMRRRRRD 349
           CR    +   RRSR +PS     T  +S  AR  SP   G      S   S   R RRR 
Sbjct: 320 CRRGGGRSPRRRSR-SPSTYSSCTTQRSQRARAESPTTRGARGSRGSRGGSRGGRLRRRG 378

Query: 348 IVTTSSS 328
             ++SSS
Sbjct: 379 RSSSSSS 385

>RECG_MYCLE (O69460) ATP-dependent DNA helicase recG (EC 3.6.1.-)|
          Length = 743

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 32/102 (31%), Positives = 45/102 (44%), Gaps = 12/102 (11%)
 Frame = -3

Query: 414 EGHAAGAQSLAFSESMRRRRRDIVTTSSSCCAQHIIV------VTESA-GTPPRS----- 271
           E  A  A  LA SES RRR R+ +T   +   Q  +V      ++ES    PPRS     
Sbjct: 219 EDEALRAIHLAESESDRRRARERLTFDEAVGLQWALVTRRHGELSESGPSAPPRSDGLMA 278

Query: 270 RAVRREPAKLDNRRPSPRDMCYRAPHASRS*SRFCQRVLPGG 145
             +RR P +L   +   RD+      A+R  +R  Q  +  G
Sbjct: 279 ELMRRLPFELTEGQREVRDVLSDGLAATRPLNRLLQGEVGSG 320

>EIN2_ARATH (Q9S814) Ethylene-insensitive protein 2 (EIN-2) (AtEIN2) (Cytokinin|
            resistant protein AtCKR1)
          Length = 1294

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -1

Query: 212  CATEPPTHQEANPASANGFCPVVTTEGGGR 123
            C   P +HQ A+P SANG  P       G+
Sbjct: 1188 CLQIPASHQRASPTSANGMLPPAAKPAKGK 1217


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,029,027
Number of Sequences: 219361
Number of extensions: 1972476
Number of successful extensions: 5747
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 5259
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5723
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5196311029
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)