ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags29m07 |
|---|---|
| Clone Library Name | barley_pub |
>DNAJ_METTE (Q9UXR9) Chaperone protein dnaJ| Length = 387 Score = 33.5 bits (75), Expect = 0.25 Identities = 17/35 (48%), Positives = 18/35 (51%), Gaps = 6/35 (17%) Frame = -1 Query: 288 KHFSLSTTERCSNCSGAG------KVMCPTCLCTG 202 K + TERCSNCSG G CPTC TG Sbjct: 133 KDIDVPRTERCSNCSGTGARPGTSPKRCPTCGGTG 167 Score = 27.3 bits (59), Expect(2) = 0.30 Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 3/26 (11%) Frame = -1 Query: 270 TTERCSNCSGAGKVM---CPTCLCTG 202 +T CS C G G+V+ CP C TG Sbjct: 182 STTTCSTCRGKGQVIESPCPVCSGTG 207 Score = 24.6 bits (52), Expect(2) = 0.30 Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 6/42 (14%) Frame = -3 Query: 391 KNVRQQEKNRCTYCHGTGYLP------CARCSASKMLLGTKT 284 K++ RC+ C GTG P C C + + T+T Sbjct: 133 KDIDVPRTERCSNCSGTGARPGTSPKRCPTCGGTGQIRTTRT 174
>DNAJ_BACSH (O69269) Chaperone protein dnaJ| Length = 368 Score = 28.1 bits (61), Expect(2) = 0.50 Identities = 10/26 (38%), Positives = 14/26 (53%) Frame = -3 Query: 382 RQQEKNRCTYCHGTGYLPCARCSASK 305 R + CT CHGTG + +CS + Sbjct: 174 RMMNRRSCTTCHGTGKIIKEKCSTCR 199 Score = 23.1 bits (48), Expect(2) = 0.50 Identities = 8/12 (66%), Positives = 9/12 (75%) Frame = -1 Query: 264 ERCSNCSGAGKV 229 E+CS C G GKV Sbjct: 193 EKCSTCRGEGKV 204
>RNFC_HAEDU (Q7VNT4) Electron transport complex protein rnfC| Length = 702 Score = 32.3 bits (72), Expect = 0.55 Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 6/45 (13%) Frame = -1 Query: 327 APVALPAKCCWAPKHFSLSTTE------RCSNCSGAGKVMCPTCL 211 +PV A C AP HF + E RCSNCS A CP L Sbjct: 359 SPVTKTANCIIAPDHFEYAPPEPERNCIRCSNCSDA----CPVSL 399
>ITB2_HUMAN (P05107) Integrin beta-2 precursor (Cell surface adhesion| glycoproteins LFA-1/CR3/p150,95 beta-subunit) (Complement receptor C3 beta-subunit) (CD18 antigen) Length = 769 Score = 26.6 bits (57), Expect(2) = 0.61 Identities = 11/30 (36%), Positives = 16/30 (53%) Frame = -3 Query: 382 RQQEKNRCTYCHGTGYLPCARCSASKMLLG 293 R Q ++R + CHG G+L C C +G Sbjct: 450 RDQSRDR-SLCHGKGFLECGICRCDTGYIG 478 Score = 24.3 bits (51), Expect(2) = 0.61 Identities = 8/14 (57%), Positives = 9/14 (64%) Frame = -1 Query: 249 CSGAGKVMCPTCLC 208 CSG G +C CLC Sbjct: 506 CSGLGDCVCGQCLC 519
>DNAJ_PASHA (O52065) Chaperone protein dnaJ| Length = 379 Score = 31.6 bits (70), Expect = 0.93 Identities = 21/71 (29%), Positives = 28/71 (39%), Gaps = 11/71 (15%) Frame = -1 Query: 381 GSKKRTDAHIVMGQDTCHAPVALPAKCCWAPKHFSLSTTERCSNCSGAGKV--------- 229 G KK H + DTCH A S E CS+C G+G++ Sbjct: 136 GCKKDIRIHTLAECDTCHGTGAEAG-----------SKVETCSHCHGSGRIRRQQGFFVT 184 Query: 228 --MCPTCLCTG 202 +CP+C TG Sbjct: 185 DAVCPSCHGTG 195
>DNAJ_METAC (Q8TQR1) Chaperone protein dnaJ| Length = 382 Score = 31.6 bits (70), Expect = 0.93 Identities = 16/35 (45%), Positives = 17/35 (48%), Gaps = 6/35 (17%) Frame = -1 Query: 288 KHFSLSTTERCSNCSGAG------KVMCPTCLCTG 202 K + TERCS CSG G CPTC TG Sbjct: 134 KDIDIPRTERCSTCSGTGAKPGTSPKRCPTCGGTG 168 Score = 24.6 bits (52), Expect(2) = 4.8 Identities = 9/22 (40%), Positives = 13/22 (59%), Gaps = 3/22 (13%) Frame = -1 Query: 270 TTERCSNCSGAGKVM---CPTC 214 +T CS C G G+++ CP C Sbjct: 183 STTTCSTCHGRGQIIESPCPVC 204 Score = 23.1 bits (48), Expect(2) = 4.8 Identities = 10/30 (33%), Positives = 13/30 (43%) Frame = -3 Query: 364 RCTYCHGTGYLPCARCSASKMLLGTKTLFT 275 RC C GTG + R + + T T T Sbjct: 160 RCPTCGGTGQVRTTRSTLGMQFISTTTCST 189
>DNAJ_PICTO (Q6L0S6) Chaperone protein dnaJ| Length = 357 Score = 25.4 bits (54), Expect(2) = 1.1 Identities = 11/36 (30%), Positives = 17/36 (47%), Gaps = 1/36 (2%) Frame = -1 Query: 282 FSLSTTERCSNCSGAGKV-MCPTCLCTGMAMASEHD 178 F + T C C G GK+ P +C G S+++ Sbjct: 179 FRMVTVTECRTCHGRGKIPQKPCTVCHGTGTVSKNE 214 Score = 24.6 bits (52), Expect(2) = 1.1 Identities = 11/33 (33%), Positives = 15/33 (45%), Gaps = 5/33 (15%) Frame = -3 Query: 391 KNVRQQEKNRCTYCHGTG-----YLPCARCSAS 308 KNV+ + C +C GTG + C C S Sbjct: 135 KNVKYRRNAMCEHCSGTGAENKVLITCPTCHGS 167
>DNAJ_BURMA (Q62HD6) Chaperone protein dnaJ| Length = 376 Score = 31.2 bits (69), Expect = 1.2 Identities = 16/30 (53%), Positives = 18/30 (60%), Gaps = 3/30 (10%) Frame = -3 Query: 361 CTYCHGTG-YLP--CARCSASKMLLGTKTL 281 C CHGTG Y+P CA C S + TKTL Sbjct: 188 CPKCHGTGTYIPEPCAHCHGSGKVKETKTL 217
>DNAJ_BURCE (Q5NSW9) Chaperone protein dnaJ| Length = 376 Score = 31.2 bits (69), Expect = 1.2 Identities = 16/30 (53%), Positives = 18/30 (60%), Gaps = 3/30 (10%) Frame = -3 Query: 361 CTYCHGTG-YLP--CARCSASKMLLGTKTL 281 C CHGTG Y+P CA C S + TKTL Sbjct: 188 CPKCHGTGTYIPEPCAHCHGSGKVKETKTL 217
>USH2A_MOUSE (Q2QI47) Usherin precursor (Usher syndrome type-2A protein homolog)| (Usher syndrome type IIa protein homolog) Length = 5193 Score = 31.2 bits (69), Expect = 1.2 Identities = 22/86 (25%), Positives = 30/86 (34%), Gaps = 18/86 (20%) Frame = -1 Query: 363 DAHIVMGQDTCHAPVAL------PAKCCWAPKHFSLSTTERCSNCS------------GA 238 D IV G+ CH P +C +P F+ +C CS Sbjct: 507 DEIIVSGRCQCHGHAETCDRTRRPYRCLCSPHSFTEGP--QCDRCSPLYNDKPFRSGDNV 564 Query: 237 GKVMCPTCLCTGMAMASEHDPRIDPF 160 C C C G A + +D +DPF Sbjct: 565 NAFNCKPCQCHGHASSCHYDASVDPF 590
>DNAJ_BACTR (Q9KWS6) Chaperone protein dnaJ| Length = 380 Score = 26.9 bits (58), Expect(2) = 1.4 Identities = 9/30 (30%), Positives = 17/30 (56%) Frame = -3 Query: 373 EKNRCTYCHGTGYLPCARCSASKMLLGTKT 284 +K C+YCHGTG + + + ++ +T Sbjct: 161 KKETCSYCHGTGQISTEQSTPFGRIVNRRT 190 Score = 22.7 bits (47), Expect(2) = 1.4 Identities = 7/12 (58%), Positives = 9/12 (75%) Frame = -1 Query: 264 ERCSNCSGAGKV 229 ERC+ C G G+V Sbjct: 203 ERCTTCGGTGRV 214
>NAPSA_MOUSE (O09043) Napsin-A precursor (EC 3.4.23.-) (Kidney-derived aspartic| protease-like protein) (KDAP-1) (KAP) Length = 419 Score = 30.8 bits (68), Expect = 1.6 Identities = 23/69 (33%), Positives = 29/69 (42%), Gaps = 6/69 (8%) Frame = +1 Query: 175 WVMLTCHCHSRAQACWAHH------LSSS*TIGTSFSCRK*KVFWCPTTFCWQSNGRMAS 336 WV T CH + ACW HH SS GT F+ + GR++ Sbjct: 98 WVPST-RCHFFSLACWFHHRFNPKASSSFRPNGTKFAIQ-------------YGTGRLSG 143 Query: 337 ILSHDNMCI 363 ILS DN+ I Sbjct: 144 ILSQDNLTI 152
>DNAJ_METMA (P35515) Chaperone protein dnaJ| Length = 389 Score = 29.6 bits (65), Expect = 3.5 Identities = 15/35 (42%), Positives = 16/35 (45%), Gaps = 6/35 (17%) Frame = -1 Query: 288 KHFSLSTTERCSNCSGAG------KVMCPTCLCTG 202 K + TERCS CSG G CP C TG Sbjct: 134 KDIDIPRTERCSTCSGTGAKPGTSPKRCPNCGGTG 168 Score = 26.6 bits (57), Expect(2) = 1.8 Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 3/26 (11%) Frame = -1 Query: 270 TTERCSNCSGAGKVM---CPTCLCTG 202 +T CS C G G+V+ CPTC G Sbjct: 183 STTTCSACHGRGQVVESPCPTCSGAG 208 Score = 22.7 bits (47), Expect(2) = 1.8 Identities = 11/42 (26%), Positives = 18/42 (42%), Gaps = 6/42 (14%) Frame = -3 Query: 391 KNVRQQEKNRCTYCHGTGYLP------CARCSASKMLLGTKT 284 K++ RC+ C GTG P C C + + T++ Sbjct: 134 KDIDIPRTERCSTCSGTGAKPGTSPKRCPNCGGTGQVRTTRS 175
>DNJH_CUCSA (Q04960) DnaJ protein homolog (DNAJ-1)| Length = 413 Score = 30.4 bits (67), Expect = 2.1 Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 6/61 (9%) Frame = -1 Query: 345 GQDTCHA-PVALPAKCCWAPKHFSLSTTERCSNCSGAG-----KVMCPTCLCTGMAMASE 184 G+D H V+L K SLS CS C G G + CP C +GM ++ Sbjct: 116 GEDVIHPLKVSLEDLYNGTSKKLSLSRNVICSKCKGKGSKSGASMKCPGCQGSGMKVSIR 175 Query: 183 H 181 H Sbjct: 176 H 176
>DNAJ2_MYCPA (Q73T77) Chaperone protein dnaJ 2| Length = 392 Score = 25.4 bits (54), Expect(2) = 2.3 Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 6/36 (16%) Frame = -3 Query: 361 CTYCHGTGYLP------CARCSASKMLLGTKTLFTF 272 CT CHG+G P C C+ S ++ + F F Sbjct: 174 CTNCHGSGARPGTSPKVCPTCNGSGVISRNQGAFGF 209 Score = 23.5 bits (49), Expect(2) = 2.3 Identities = 9/26 (34%), Positives = 16/26 (61%), Gaps = 3/26 (11%) Frame = -1 Query: 267 TERCSNCSGAGKVM---CPTCLCTGM 199 +E C++C G+G ++ C C TG+ Sbjct: 210 SEPCTDCRGSGSIIEHPCDECKGTGV 235
>DNAJ1_MYCLE (Q02605) Chaperone protein dnaJ 1| Length = 388 Score = 25.8 bits (55), Expect(2) = 2.3 Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 6/36 (16%) Frame = -3 Query: 361 CTYCHGTGYLP------CARCSASKMLLGTKTLFTF 272 CT CHG+G P C+ C+ S ++ + F F Sbjct: 172 CTNCHGSGARPGISPKVCSTCNGSGVINRNQGAFGF 207 Score = 23.1 bits (48), Expect(2) = 2.3 Identities = 9/26 (34%), Positives = 15/26 (57%), Gaps = 3/26 (11%) Frame = -1 Query: 267 TERCSNCSGAGKVM---CPTCLCTGM 199 +E C+ C G+G ++ C C TG+ Sbjct: 208 SEPCTECRGSGSIIEHPCEECKGTGV 233
>DNJH_ATRNU (P43644) DnaJ protein homolog ANJ1| Length = 417 Score = 30.0 bits (66), Expect = 2.7 Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 6/61 (9%) Frame = -1 Query: 345 GQDTCHA-PVALPAKCCWAPKHFSLSTTERCSNCSGAG-----KVMCPTCLCTGMAMASE 184 G+D H V+L K SLS CS C+G G + C C TGM ++ Sbjct: 118 GEDVVHPLKVSLEDLFTGTTKKLSLSRNVICSKCTGKGSKSGASMKCSGCQGTGMKVSIR 177 Query: 183 H 181 H Sbjct: 178 H 178
>DNAJ1_MYCTU (P0A548) Chaperone protein dnaJ 1| Length = 395 Score = 25.0 bits (53), Expect(2) = 2.9 Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 6/36 (16%) Frame = -3 Query: 361 CTYCHGTGYLP------CARCSASKMLLGTKTLFTF 272 CT CHG+G P C C+ S ++ + F F Sbjct: 177 CTNCHGSGARPGTSPKVCPTCNGSGVINRNQGAFGF 212 Score = 23.5 bits (49), Expect(2) = 2.9 Identities = 9/26 (34%), Positives = 16/26 (61%), Gaps = 3/26 (11%) Frame = -1 Query: 267 TERCSNCSGAGKVM---CPTCLCTGM 199 +E C++C G+G ++ C C TG+ Sbjct: 213 SEPCTDCRGSGSIIEHPCEECKGTGV 238
>DNAJ1_MYCBO (P0A549) Chaperone protein dnaJ 1| Length = 395 Score = 25.0 bits (53), Expect(2) = 2.9 Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 6/36 (16%) Frame = -3 Query: 361 CTYCHGTGYLP------CARCSASKMLLGTKTLFTF 272 CT CHG+G P C C+ S ++ + F F Sbjct: 177 CTNCHGSGARPGTSPKVCPTCNGSGVINRNQGAFGF 212 Score = 23.5 bits (49), Expect(2) = 2.9 Identities = 9/26 (34%), Positives = 16/26 (61%), Gaps = 3/26 (11%) Frame = -1 Query: 267 TERCSNCSGAGKVM---CPTCLCTGM 199 +E C++C G+G ++ C C TG+ Sbjct: 213 SEPCTDCRGSGSIIEHPCEECKGTGV 238
>DNAJ_TREDE (Q73Q15) Chaperone protein dnaJ| Length = 379 Score = 29.6 bits (65), Expect = 3.5 Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 6/37 (16%) Frame = -1 Query: 279 SLSTTERCSNC------SGAGKVMCPTCLCTGMAMAS 187 S + E+CS C SG+ K MCP C TG S Sbjct: 153 SYTRNEKCSECHGTGSESGSSKRMCPDCKGTGQVRQS 189
>DNAJ_BURPS (Q63R47) Chaperone protein dnaJ| Length = 376 Score = 29.6 bits (65), Expect = 3.5 Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 3/30 (10%) Frame = -3 Query: 361 CTYCHGTG-YLP--CARCSASKMLLGTKTL 281 C CHGTG Y+P C C S + TKTL Sbjct: 188 CPKCHGTGTYIPEPCVHCHGSGKVKETKTL 217
>SUFS_YERPE (Q8D0M6) Cysteine desulfurase (EC 2.8.1.7) (Selenocysteine lyase)| (EC 4.4.1.16) (Selenocysteine reductase) (Selenocysteine beta-lyase) (SCL) Length = 406 Score = 29.6 bits (65), Expect = 3.5 Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 6/99 (6%) Frame = -2 Query: 413 SLNVG*SEKCEAARKEQ---MHILSWDRILAMRPLLCQQNVVGHQNTFHFLQLNDVPIVQ 243 SL+ +++ EA R + +H S + I+ +R N+V + HFL D I+ Sbjct: 60 SLSAEATQQMEAVRTQVADFIHAASAEEIIFVRGTTEAINLVANSYGRHFLAAGDSIIIT 119 Query: 242 ELER*CAQHACAREWQWQVSMTHV*I---PLTNVGQFDL 135 E+E HA WQ V I PLT G+ ++ Sbjct: 120 EME----HHANIVPWQMLAQDLGVEIRVWPLTATGELEI 154
>DNAJ_GEOSL (Q74H58) Chaperone protein dnaJ| Length = 373 Score = 29.6 bits (65), Expect = 3.5 Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 3/30 (10%) Frame = -3 Query: 361 CTYCHGTGYL---PCARCSASKMLLGTKTL 281 C +C+G G + PC C S M+ TKTL Sbjct: 188 CNHCNGEGRVVENPCTSCRGSGMIRDTKTL 217
>DNAJ_HAEDU (P48208) Chaperone protein dnaJ| Length = 377 Score = 29.6 bits (65), Expect = 3.5 Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 7/63 (11%) Frame = -1 Query: 381 GSKKRTDAHIVMGQDTCH-APVALPAKCCWAPKHFSLSTTERCSNCSGAG-----KV-MC 223 GS+++ H+V GQD + ++L K LST C NC G G KV C Sbjct: 108 GSRRQ---HVVRGQDLRYDIEISLEEAVKGCKKDIRLSTLAECDNCHGTGAEAGTKVENC 164 Query: 222 PTC 214 P C Sbjct: 165 PHC 167
>DNAJ_NITEU (O06431) Chaperone protein dnaJ| Length = 369 Score = 29.3 bits (64), Expect = 4.6 Identities = 17/53 (32%), Positives = 22/53 (41%), Gaps = 11/53 (20%) Frame = -1 Query: 339 DTCHA----PVALPAKCCWAPKHFSL-------STTERCSNCSGAGKVMCPTC 214 DTCH P P C H + S + CS+C G+GKV+ C Sbjct: 142 DTCHGSGAKPGTSPKTCPTCNGHGQIRMQQGFFSIQQTCSHCQGSGKVVSDPC 194
>DNAJ_CLOPE (Q8XIT1) Chaperone protein dnaJ| Length = 387 Score = 26.2 bits (56), Expect(2) = 4.8 Identities = 11/25 (44%), Positives = 13/25 (52%), Gaps = 3/25 (12%) Frame = -1 Query: 279 SLSTTERCSNCSGAGKVM---CPTC 214 S +T C C G GKV+ CP C Sbjct: 193 SFVSTTTCDQCGGTGKVIEDPCPDC 217 Score = 21.6 bits (44), Expect(2) = 4.8 Identities = 10/34 (29%), Positives = 13/34 (38%), Gaps = 6/34 (17%) Frame = -3 Query: 391 KNVRQQEKNRCTYCHGTGY------LPCARCSAS 308 K + C CHGTG C +C+ S Sbjct: 147 KEISITRTENCETCHGTGAKAGTSPKTCPKCNGS 180
>USH2A_RAT (Q8K3K1) Usherin precursor (Usher syndrome type-2A protein homolog)| (Usher syndrome type IIa protein homolog) Length = 1512 Score = 28.9 bits (63), Expect = 6.0 Identities = 22/86 (25%), Positives = 32/86 (37%), Gaps = 18/86 (20%) Frame = -1 Query: 363 DAHIVMGQDTCHAPVAL------PAKCCWAPKHFSLSTTERCSNCS---------GAGKV 229 D ++G+ CH P +C +P F+ +C CS KV Sbjct: 506 DEITIIGRCQCHGHAETCDRTRRPYRCLCSPHSFTEGP--QCGRCSPLYNDKPFRSGNKV 563 Query: 228 M---CPTCLCTGMAMASEHDPRIDPF 160 C C C G A + +D +DPF Sbjct: 564 HAFNCKPCQCHGHASSCHYDASMDPF 589
>DNAJ_METSS (Q9ZFC5) Chaperone protein dnaJ| Length = 371 Score = 28.5 bits (62), Expect = 7.9 Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 18/75 (24%) Frame = -1 Query: 372 KRTDAHI---VMGQ-DTCHA----PVALPAKCCWAPKHFSL-------STTERCSNCSGA 238 +RT+ I VM + +TCH P P C H + S + C C G+ Sbjct: 131 RRTETKIRIPVMSECETCHGSGARPGTQPVTCTTCGGHGQVRMQQGFFSVQQTCPKCHGS 190 Query: 237 GKVM---CPTCLCTG 202 GK++ CP+C G Sbjct: 191 GKMVKEPCPSCQGAG 205
>CARKL_MOUSE (Q9D5J6) Carbohydrate kinase-like protein (EC 2.7.1.-)| Length = 476 Score = 28.5 bits (62), Expect = 7.9 Identities = 22/79 (27%), Positives = 32/79 (40%), Gaps = 1/79 (1%) Frame = +3 Query: 111 GK*HNHQAQVKLPNISQRDLYVGHAHLPLPFPCTSMLGTS-PFQLLNNWNIVQL*KVKSV 287 G+ H + IS DL +GH L L + PFQ L W + ++ S Sbjct: 372 GERHLPDQLASVTRISSSDLSLGHVTRALCRGIVQNLHSMLPFQQLKEWGVARVVGSGSA 431 Query: 288 LVPNNILLAEQRAHGKYPV 344 L N +L E + +PV Sbjct: 432 LSRNEVLKQEVQRAFPFPV 450
>DNAJ_SHEON (Q8EHT6) Chaperone protein dnaJ| Length = 378 Score = 28.5 bits (62), Expect = 7.9 Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 3/30 (10%) Frame = -3 Query: 361 CTYCHGTGYL---PCARCSASKMLLGTKTL 281 C CHG G + PCA+C + TKTL Sbjct: 186 CPTCHGRGKIIKDPCAKCHGDGRVEKTKTL 215
>ITB4_RAT (Q64632) Integrin beta-4 precursor (GP150) (CD104 antigen)| Length = 1807 Score = 28.5 bits (62), Expect = 7.9 Identities = 16/46 (34%), Positives = 19/46 (41%), Gaps = 6/46 (13%) Frame = -1 Query: 279 SLSTTERCSN------CSGAGKVMCPTCLCTGMAMASEHDPRIDPF 160 SLS T+ C CSG G+ C C+C G H D F Sbjct: 497 SLSDTQPCLREGEDKPCSGHGECQCGRCVCYGEGRYEGHFCEYDNF 542
>T2R62_PANPA (Q5Y4Z0) Taste receptor type 2 member 62 (T2R62)| Length = 312 Score = 28.5 bits (62), Expect = 7.9 Identities = 12/28 (42%), Positives = 15/28 (53%), Gaps = 3/28 (10%) Frame = +1 Query: 148 PTLVKGIYTWVMLTCHCHSRAQA---CW 222 P L KG+ TW L C C + +Q CW Sbjct: 284 PKLKKGLKTWPQLQCPCDAGSQGFGRCW 311 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 63,159,253 Number of Sequences: 219361 Number of extensions: 1296111 Number of successful extensions: 4003 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 3620 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3987 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2677159704 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
