ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags29l13
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|BT009538.1| Triticum aestivum clone wr1.pk0144.b10:fis, full ... 878 0.0
2gb|AY105429.1| Zea mays PCO143975 mRNA sequence 301 2e-78
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 246 8e-62
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 246 8e-62
5gb|AC097280.8| Oryza sativa chromosome 3 BAC OSJNBb0111B07 genom... 246 8e-62
6dbj|AK072419.1| Oryza sativa (japonica cultivar-group) cDNA clon... 246 8e-62
7dbj|AK071474.1| Oryza sativa (japonica cultivar-group) cDNA clon... 246 8e-62
8ref|XM_463196.1| Oryza sativa (japonica cultivar-group), mRNA 244 3e-61
9gb|BT024046.1| Zea mays clone EL01N0431D03 mRNA sequence 242 1e-60
10emb|BX469888.5| Zebrafish DNA sequence from clone CH211-73C20 in... 46 0.15
11emb|AL928691.7| Zebrafish DNA sequence from clone CH211-51H20 in... 46 0.15
12emb|CR387921.7| Zebrafish DNA sequence from clone CH211-84M6 in ... 44 0.58
13gb|AC151481.4| Medicago truncatula clone mth2-3m11, complete seq... 42 2.3
14emb|AL603793.4| Mouse DNA sequence from clone RP23-131A14 on chr... 42 2.3
15dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
16dbj|AP004324.2| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
17emb|BX649455.14| Zebrafish DNA sequence from clone CH211-151J12 ... 42 2.3
18ref|NM_119323.1| Arabidopsis thaliana unknown protein AT4G31740 ... 40 9.0
19ref|XM_640445.1| Dictyostelium discoideum ATP-specific succinyl-... 40 9.0
20gb|AY735658.1| Arabidopsis thaliana hypothetical protein AT4G317... 40 9.0
21gb|AY935268.1| Antirrhinum majus farinelli (FAR) gene, complete ... 40 9.0
22emb|AL161728.25| Human DNA sequence from clone RP11-342C23 on ch... 40 9.0
23emb|AL160257.12| Human DNA sequence from clone RP11-77O2 on chro... 40 9.0
24emb|AL662812.12| Mouse DNA sequence from clone RP23-48A2 on chro... 40 9.0
25emb|AL161579.2|ATCHRIV75 Arabidopsis thaliana DNA chromosome 4, ... 40 9.0
26emb|AL031004.1|ATF28M20 Arabidopsis thaliana DNA chromosome 4, B... 40 9.0
27gb|AC114777.4| Homo sapiens BAC clone RP11-496D24 from 4, comple... 40 9.0
28gb|AC115594.2| Dictyostelium discoideum chromosome 2 map 4071862... 40 9.0
29dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome 40 9.0
30emb|BX293537.10| Mouse DNA sequence from clone RP23-240M8 on chr... 40 9.0
31emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 40 9.0
32gb|AF081854.1|AF081854 Nocomis biguttatus 12S ribosomal RNA gene... 40 9.0
33gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1... 40 9.0
34dbj|AP006644.1| Lotus japonicus genomic DNA, chromosome 3, clone... 40 9.0
35gb|AC165235.11| Mus musculus chromosome 8, clone RP23-332G19, co... 40 9.0

>gb|BT009538.1| Triticum aestivum clone wr1.pk0144.b10:fis, full insert mRNA
           sequence
          Length = 2748

 Score =  878 bits (443), Expect = 0.0
 Identities = 561/596 (94%), Gaps = 12/596 (2%)
 Strand = Plus / Minus

                                                                       
Query: 67  gaaacaacaataaacgagcatacatggacatttcaacatattggacttctagagcagttg 126
           ||||||| || ||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 776 gaaacaaaaagaaacgagcatacatggacatttcaacatattggacttctggaacagttg 717

                                                                       
Query: 127 aa-tctcgcaagaaatctttgtattgataactcattcaaagcagcgccataaatccgaca 185
           || ||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||||
Sbjct: 716 aactctggcaagaaatctttgtattgataattcattcaaagcagcgccataaacccgaca 657

                                                                       
Query: 186 acagagaaatttgataccattacacattagtctatgcagcctggatcactccttag---c 242
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||   |
Sbjct: 656 acagggaaatttgataccattacacattagtctatgcagcctggatcactccttagtagc 597

                                                                       
Query: 243 atcaagtgtcggcaagagactatttactgcaacctgtgaagcttcaa---tcccacctta 299
           |||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||
Sbjct: 596 atcaagtgtcggcaagagactatttactgcaacctgtgaagcttcaacaatcccacctta 537

                                                                       
Query: 300 gcatcaaaacatctggtaagagcatatttttactgttgtggtaggttgctgctgcc---a 356
           ||||||||||||||||||||||| |||||  ||||  |||||||||||||||||||   |
Sbjct: 536 gcatcaaaacatctggtaagagcgtattt--actgcggtggtaggttgctgctgccgcca 479

                                                                       
Query: 357 ccacccaatcccgctttctgtcccaattctgcgagttgctgaataaattccacaccattg 416
           ||||| ||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||
Sbjct: 478 ccacctaatcccgctttctgtcccagttctgcgagctgctgaataaattccaccccattg 419

                                                                       
Query: 417 agaatctctgttgctccatatatgacatgctttgaaggctgtgagcgttgccctagctca 476
           |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 418 agaatctccgttgctccatatatgacatgctttgaaggctgtgagcgctgccctagctca 359

                                                                       
Query: 477 actaagctcctatactcaatgtaatttccgccaccaatcatgaaaacaattgcttctctg 536
           ||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 358 actaagctcctatactcgatgtaatttccaccaccaatcatgaaaacaatggcttctctg 299

                                                                       
Query: 537 aagggtcctctaaactgcccaccagttcctgatctaggggcccgtgggtcgaacaatagg 596
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||
Sbjct: 298 aagggtcctctaaactgcccaccagttcctgatctaggggcccgtggatcgaacagtagg 239

                                                                   
Query: 597 tagttgtccacctctgggtttggtttcccttccatgagggcttcaacagtcctagt 652
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 238 tagttgtccacctctgggtttggtttcccttccatgagggcttcgacagtcctagt 183



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>gb|AY105429.1| Zea mays PCO143975 mRNA sequence
          Length = 776

 Score =  301 bits (152), Expect = 2e-78
 Identities = 281/324 (86%)
 Strand = Plus / Minus

                                                                       
Query: 337 gtggtaggttgctgctgccaccacccaatcccgctttctgtcccaattctgcgagttgct 396
           |||||| ||||||||||||||||||||| || |||||||| ||||||||||| ||||| |
Sbjct: 462 gtggtatgttgctgctgccaccacccaaccctgctttctgccccaattctgccagttggt 403

                                                                       
Query: 397 gaataaattccacaccattgagaatctctgttgctccatatatgacatgctttgaaggct 456
           ||||||| ||  | ||| | ||||| |||||||| |||||||| ||||| || |||||||
Sbjct: 402 gaataaactcggccccactaagaatttctgttgcaccatatataacatgtttggaaggct 343

                                                                       
Query: 457 gtgagcgttgccctagctcaactaagctcctatactcaatgtaatttccgccaccaatca 516
           |||||||||||  |||||| |  |||||| | ||||||||||||||||| ||||| ||||
Sbjct: 342 gtgagcgttgctttagctctatcaagctcttgtactcaatgtaatttccaccaccgatca 283

                                                                       
Query: 517 tgaaaacaattgcttctctgaagggtcctctaaactgcccaccagttcctgatctagggg 576
           |||||||||  |||||||||||||||||| |||||||||||| ||||||||| ||||| |
Sbjct: 282 tgaaaacaacggcttctctgaagggtcctttaaactgcccactagttcctgacctaggag 223

                                                                       
Query: 577 cccgtgggtcgaacaataggtagttgtccacctctgggtttggtttcccttccatgaggg 636
           ||||||| || ||||| |||||||  ||||||||||||||||||||||||||||| || |
Sbjct: 222 cccgtggatcaaacaaaaggtagtcatccacctctgggtttggtttcccttccataagag 163

                                   
Query: 637 cttcaacagtcctagtcagggcca 660
           ||||||| || || |||| |||||
Sbjct: 162 cttcaactgttcttgtcaaggcca 139



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  246 bits (124), Expect = 8e-62
 Identities = 259/304 (85%)
 Strand = Plus / Plus

                                                                            
Query: 328      tttactgttgtggtaggttgctgctgccaccacccaatcccgctttctgtcccaattctg 387
                |||||||  |||| ||| |||||||| |||||||||| || |||||||| |||| |||||
Sbjct: 23353153 tttactggggtggcaggctgctgctgacaccacccaaccctgctttctgccccagttctg 23353212

                                                                            
Query: 388      cgagttgctgaataaattccacaccattgagaatctctgttgctccatatatgacatgct 447
                 ||||||||||||||| ||||| ||||| ||||| || ||||||||||||||||| ||||
Sbjct: 23353213 agagttgctgaataaactccaccccattaagaatttcagttgctccatatatgacttgct 23353272

                                                                            
Query: 448      ttgaaggctgtgagcgttgccctagctcaactaagctcctatactcaatgtaatttccgc 507
                | | || |||||| ||||||  ||||||    |||||||| || |||||||||||||| |
Sbjct: 23353273 tggtagtctgtgaacgttgcgttagctctgtcaagctcctgtattcaatgtaatttccac 23353332

                                                                            
Query: 508      caccaatcatgaaaacaattgcttctctgaagggtcctctaaactgcccaccagttcctg 567
                ||||||||||||||||||| || ||||||||||||||||| ||||| ||| |||||||||
Sbjct: 23353333 caccaatcatgaaaacaatggcctctctgaagggtcctctgaactgtccagcagttcctg 23353392

                                                                            
Query: 568      atctaggggcccgtgggtcgaacaataggtagttgtccacctctgggtttggtttccctt 627
                || ||||||||||||| || || | || ||||||||| || || || ||||||||||| |
Sbjct: 23353393 atttaggggcccgtggatcaaatagtaagtagttgtcaacttcaggatttggtttcccct 23353452

                    
Query: 628      ccat 631
                ||||
Sbjct: 23353453 ccat 23353456



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  246 bits (124), Expect = 8e-62
 Identities = 259/304 (85%)
 Strand = Plus / Plus

                                                                            
Query: 328      tttactgttgtggtaggttgctgctgccaccacccaatcccgctttctgtcccaattctg 387
                |||||||  |||| ||| |||||||| |||||||||| || |||||||| |||| |||||
Sbjct: 23346181 tttactggggtggcaggctgctgctgacaccacccaaccctgctttctgccccagttctg 23346240

                                                                            
Query: 388      cgagttgctgaataaattccacaccattgagaatctctgttgctccatatatgacatgct 447
                 ||||||||||||||| ||||| ||||| ||||| || ||||||||||||||||| ||||
Sbjct: 23346241 agagttgctgaataaactccaccccattaagaatttcagttgctccatatatgacttgct 23346300

                                                                            
Query: 448      ttgaaggctgtgagcgttgccctagctcaactaagctcctatactcaatgtaatttccgc 507
                | | || |||||| ||||||  ||||||    |||||||| || |||||||||||||| |
Sbjct: 23346301 tggtagtctgtgaacgttgcgttagctctgtcaagctcctgtattcaatgtaatttccac 23346360

                                                                            
Query: 508      caccaatcatgaaaacaattgcttctctgaagggtcctctaaactgcccaccagttcctg 567
                ||||||||||||||||||| || ||||||||||||||||| ||||| ||| |||||||||
Sbjct: 23346361 caccaatcatgaaaacaatggcctctctgaagggtcctctgaactgtccagcagttcctg 23346420

                                                                            
Query: 568      atctaggggcccgtgggtcgaacaataggtagttgtccacctctgggtttggtttccctt 627
                || ||||||||||||| || || | || ||||||||| || || || ||||||||||| |
Sbjct: 23346421 atttaggggcccgtggatcaaatagtaagtagttgtcaacttcaggatttggtttcccct 23346480

                    
Query: 628      ccat 631
                ||||
Sbjct: 23346481 ccat 23346484



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>gb|AC097280.8| Oryza sativa chromosome 3 BAC OSJNBb0111B07 genomic sequence, complete
             sequence
          Length = 129647

 Score =  246 bits (124), Expect = 8e-62
 Identities = 259/304 (85%)
 Strand = Plus / Plus

                                                                         
Query: 328   tttactgttgtggtaggttgctgctgccaccacccaatcccgctttctgtcccaattctg 387
             |||||||  |||| ||| |||||||| |||||||||| || |||||||| |||| |||||
Sbjct: 35809 tttactggggtggcaggctgctgctgacaccacccaaccctgctttctgccccagttctg 35868

                                                                         
Query: 388   cgagttgctgaataaattccacaccattgagaatctctgttgctccatatatgacatgct 447
              ||||||||||||||| ||||| ||||| ||||| || ||||||||||||||||| ||||
Sbjct: 35869 agagttgctgaataaactccaccccattaagaatttcagttgctccatatatgacttgct 35928

                                                                         
Query: 448   ttgaaggctgtgagcgttgccctagctcaactaagctcctatactcaatgtaatttccgc 507
             | | || |||||| ||||||  ||||||    |||||||| || |||||||||||||| |
Sbjct: 35929 tggtagtctgtgaacgttgcgttagctctgtcaagctcctgtattcaatgtaatttccac 35988

                                                                         
Query: 508   caccaatcatgaaaacaattgcttctctgaagggtcctctaaactgcccaccagttcctg 567
             ||||||||||||||||||| || ||||||||||||||||| ||||| ||| |||||||||
Sbjct: 35989 caccaatcatgaaaacaatggcctctctgaagggtcctctgaactgtccagcagttcctg 36048

                                                                         
Query: 568   atctaggggcccgtgggtcgaacaataggtagttgtccacctctgggtttggtttccctt 627
             || ||||||||||||| || || | || ||||||||| || || || ||||||||||| |
Sbjct: 36049 atttaggggcccgtggatcaaatagtaagtagttgtcaacttcaggatttggtttcccct 36108

                 
Query: 628   ccat 631
             ||||
Sbjct: 36109 ccat 36112



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>dbj|AK072419.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023083A08, full
            insert sequence
          Length = 1588

 Score =  246 bits (124), Expect = 8e-62
 Identities = 259/304 (85%)
 Strand = Plus / Minus

                                                                        
Query: 328  tttactgttgtggtaggttgctgctgccaccacccaatcccgctttctgtcccaattctg 387
            |||||||  |||| ||| |||||||| |||||||||| || |||||||| |||| |||||
Sbjct: 1402 tttactggggtggcaggctgctgctgacaccacccaaccctgctttctgccccagttctg 1343

                                                                        
Query: 388  cgagttgctgaataaattccacaccattgagaatctctgttgctccatatatgacatgct 447
             ||||||||||||||| ||||| ||||| ||||| || ||||||||||||||||| ||||
Sbjct: 1342 agagttgctgaataaactccaccccattaagaatttcagttgctccatatatgacttgct 1283

                                                                        
Query: 448  ttgaaggctgtgagcgttgccctagctcaactaagctcctatactcaatgtaatttccgc 507
            | | || |||||| ||||||  ||||||    |||||||| || |||||||||||||| |
Sbjct: 1282 tggtagtctgtgaacgttgcgttagctctgtcaagctcctgtattcaatgtaatttccac 1223

                                                                        
Query: 508  caccaatcatgaaaacaattgcttctctgaagggtcctctaaactgcccaccagttcctg 567
            ||||||||||||||||||| || ||||||||||||||||| ||||| ||| |||||||||
Sbjct: 1222 caccaatcatgaaaacaatggcctctctgaagggtcctctgaactgtccagcagttcctg 1163

                                                                        
Query: 568  atctaggggcccgtgggtcgaacaataggtagttgtccacctctgggtttggtttccctt 627
            || ||||||||||||| || || | || ||||||||| || || || ||||||||||| |
Sbjct: 1162 atttaggggcccgtggatcaaatagtaagtagttgtcaacttcaggatttggtttcccct 1103

                
Query: 628  ccat 631
            ||||
Sbjct: 1102 ccat 1099



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>dbj|AK071474.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023097B21, full
            insert sequence
          Length = 2066

 Score =  246 bits (124), Expect = 8e-62
 Identities = 259/304 (85%)
 Strand = Plus / Minus

                                                                        
Query: 328  tttactgttgtggtaggttgctgctgccaccacccaatcccgctttctgtcccaattctg 387
            |||||||  |||| ||| |||||||| |||||||||| || |||||||| |||| |||||
Sbjct: 1942 tttactggggtggcaggctgctgctgacaccacccaaccctgctttctgccccagttctg 1883

                                                                        
Query: 388  cgagttgctgaataaattccacaccattgagaatctctgttgctccatatatgacatgct 447
             ||||||||||||||| ||||| ||||| ||||| || ||||||||||||||||| ||||
Sbjct: 1882 agagttgctgaataaactccaccccattaagaatttcagttgctccatatatgacttgct 1823

                                                                        
Query: 448  ttgaaggctgtgagcgttgccctagctcaactaagctcctatactcaatgtaatttccgc 507
            | | || |||||| ||||||  ||||||    |||||||| || |||||||||||||| |
Sbjct: 1822 tggtagtctgtgaacgttgcgttagctctgtcaagctcctgtattcaatgtaatttccac 1763

                                                                        
Query: 508  caccaatcatgaaaacaattgcttctctgaagggtcctctaaactgcccaccagttcctg 567
            ||||||||||||||||||| || ||||||||||||||||| ||||| ||| |||||||||
Sbjct: 1762 caccaatcatgaaaacaatggcctctctgaagggtcctctgaactgtccagcagttcctg 1703

                                                                        
Query: 568  atctaggggcccgtgggtcgaacaataggtagttgtccacctctgggtttggtttccctt 627
            || ||||||||||||| || || | || ||||||||| || || || ||||||||||| |
Sbjct: 1702 atttaggggcccgtggatcaaatagtaagtagttgtcaacttcaggatttggtttcccct 1643

                
Query: 628  ccat 631
            ||||
Sbjct: 1642 ccat 1639



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>ref|XM_463196.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1872

 Score =  244 bits (123), Expect = 3e-61
 Identities = 252/295 (85%)
 Strand = Plus / Minus

                                                                        
Query: 337  gtggtaggttgctgctgccaccacccaatcccgctttctgtcccaattctgcgagttgct 396
            |||| ||| |||||||| |||||||||| || |||||||| |||| ||||| ||||||||
Sbjct: 1864 gtggcaggctgctgctgacaccacccaaccctgctttctgccccagttctgagagttgct 1805

                                                                        
Query: 397  gaataaattccacaccattgagaatctctgttgctccatatatgacatgctttgaaggct 456
            ||||||| ||||| ||||| ||||| || ||||||||||||||||| ||||| | || ||
Sbjct: 1804 gaataaactccaccccattaagaatttcagttgctccatatatgacttgcttggtagtct 1745

                                                                        
Query: 457  gtgagcgttgccctagctcaactaagctcctatactcaatgtaatttccgccaccaatca 516
            |||| ||||||  ||||||    |||||||| || |||||||||||||| ||||||||||
Sbjct: 1744 gtgaacgttgcgttagctctgtcaagctcctgtattcaatgtaatttccaccaccaatca 1685

                                                                        
Query: 517  tgaaaacaattgcttctctgaagggtcctctaaactgcccaccagttcctgatctagggg 576
            |||||||||| || ||||||||||||||||| ||||| ||| ||||||||||| ||||||
Sbjct: 1684 tgaaaacaatggcctctctgaagggtcctctgaactgtccagcagttcctgatttagggg 1625

                                                                   
Query: 577  cccgtgggtcgaacaataggtagttgtccacctctgggtttggtttcccttccat 631
            ||||||| || || | || ||||||||| || || || ||||||||||| |||||
Sbjct: 1624 cccgtggatcaaatagtaagtagttgtcaacttcaggatttggtttcccctccat 1570



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>gb|BT024046.1| Zea mays clone EL01N0431D03 mRNA sequence
          Length = 2180

 Score =  242 bits (122), Expect = 1e-60
 Identities = 273/322 (84%), Gaps = 1/322 (0%)
 Strand = Plus / Minus

                                                                        
Query: 339  ggtaggttgctgctgccaccacccaatcccgctttctgtcccaattctgcgagttgctga 398
            |||| ||||||| ||||||||||||| || | |||||| ||||||||||| || ||  ||
Sbjct: 1802 ggtatgttgctggtgccaccacccaaccctggtttctgccccaattctgccaggtgggga 1743

                                                                        
Query: 399  ataaattccacaccattgagaatctctgttgctccatatatgacatgctttgaaggctgt 458
            ||||| ||  | ||| | ||||| |||| ||| |||||||| ||||| || ||||| |||
Sbjct: 1742 ataaactcggccccactaagaatttctggtgcaccatatataacatgtttggaagggtgt 1683

                                                                        
Query: 459  gagcgttgccctagctcaactaagctcctatactcaatgtaatttccgccaccaatcatg 518
            |||||||||  |||||| | | ||||| | ||||||||||||||||| ||||| ||||||
Sbjct: 1682 gagcgttgctttagctcta-tcagctcttgtactcaatgtaatttccaccaccgatcatg 1624

                                                                        
Query: 519  aaaacaattgcttctctgaagggtcctctaaactgcccaccagttcctgatctaggggcc 578
            |||||||  |||||||||||||||||| |||||||||||| ||||||||| ||||| |||
Sbjct: 1623 aaaacaacggcttctctgaagggtcctttaaactgcccactagttcctgacctaggagcc 1564

                                                                        
Query: 579  cgtgggtcgaacaataggtagttgtccacctctgggtttggtttcccttccatgagggct 638
            ||||| || ||||| |||||||  ||||||||||||||||||||||||||||| || |||
Sbjct: 1563 cgtggatcaaacaaaaggtagtcatccacctctgggtttggtttcccttccataagagct 1504

                                  
Query: 639  tcaacagtcctagtcagggcca 660
            ||||| || || |||| |||||
Sbjct: 1503 tcaactgttcttgtcaaggcca 1482



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>emb|BX469888.5| Zebrafish DNA sequence from clone CH211-73C20 in linkage group 14,
             complete sequence
          Length = 188432

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 480   aagctcctatactcaatgtaatt 502
             |||||||||||||||||||||||
Sbjct: 17998 aagctcctatactcaatgtaatt 18020



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>emb|AL928691.7| Zebrafish DNA sequence from clone CH211-51H20 in linkage group 14,
             complete sequence
          Length = 167320

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 480   aagctcctatactcaatgtaatt 502
             |||||||||||||||||||||||
Sbjct: 22407 aagctcctatactcaatgtaatt 22385



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>emb|CR387921.7| Zebrafish DNA sequence from clone CH211-84M6 in linkage group 17,
              complete sequence
          Length = 187568

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 83     agcatacatggacatttcaaca 104
              ||||||||||||||||||||||
Sbjct: 142762 agcatacatggacatttcaaca 142741



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>gb|AC151481.4| Medicago truncatula clone mth2-3m11, complete sequence
          Length = 99012

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 517   tgaaaacaattgcttctctga 537
             |||||||||||||||||||||
Sbjct: 53544 tgaaaacaattgcttctctga 53524



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>emb|AL603793.4| Mouse DNA sequence from clone RP23-131A14 on chromosome 11, complete
              sequence
          Length = 201815

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 289    atcccaccttagcatcaaaac 309
              |||||||||||||||||||||
Sbjct: 183832 atcccaccttagcatcaaaac 183852



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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 119      agcagttgaatctcgcaagaa 139
                |||||||||||||||||||||
Sbjct: 29207919 agcagttgaatctcgcaagaa 29207899



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>dbj|AP004324.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OJ1215_E11
          Length = 105301

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 119   agcagttgaatctcgcaagaa 139
             |||||||||||||||||||||
Sbjct: 75206 agcagttgaatctcgcaagaa 75186



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>emb|BX649455.14| Zebrafish DNA sequence from clone CH211-151J12 in linkage group 4,
             complete sequence
          Length = 116689

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 316   taagagcatatttttactgtt 336
             |||||||||||||||||||||
Sbjct: 53858 taagagcatatttttactgtt 53838



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>ref|NM_119323.1| Arabidopsis thaliana unknown protein AT4G31740 mRNA, complete cds
          Length = 516

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                           
Query: 486 ctatactcaatgtaatttccgccaccaatcatgaaaacaattgcttct 533
           ||||| |||||||| || || |||||||||||||| || || ||||||
Sbjct: 386 ctatattcaatgtagttacctccaccaatcatgaagactatggcttct 339



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>ref|XM_640445.1| Dictyostelium discoideum ATP-specific succinyl-CoA synthetase subunit
            beta (DDB0231357), partial mRNA
          Length = 1338

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 148  attgataactcattcaaagcagcg 171
            ||||||||||| ||||||||||||
Sbjct: 1145 attgataactccttcaaagcagcg 1122



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>gb|AY735658.1| Arabidopsis thaliana hypothetical protein AT4G31740 mRNA, complete
           cds
          Length = 765

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                           
Query: 486 ctatactcaatgtaatttccgccaccaatcatgaaaacaattgcttct 533
           ||||| |||||||| || || |||||||||||||| || || ||||||
Sbjct: 458 ctatattcaatgtagttacctccaccaatcatgaagactatggcttct 411



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>gb|AY935268.1| Antirrhinum majus farinelli (FAR) gene, complete sequence
          Length = 54307

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 407   cacaccattgagaatctctg 426
             ||||||||||||||||||||
Sbjct: 20771 cacaccattgagaatctctg 20752



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>emb|AL161728.25| Human DNA sequence from clone RP11-342C23 on chromosome 9 Contains the
             FBP1 gene for Fructose-1,6-bisphosphatase 1, a novel gene,
             the FBP2 gene for Fructose-1,6-bisphosphatase 2, a  gene
             for a putative novel protein and one CpG island, complete
             sequence
          Length = 170532

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 550   actgcccaccagttcctgatctag 573
             |||||||||||||||||| |||||
Sbjct: 37008 actgcccaccagttcctgctctag 37031



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>emb|AL160257.12| Human DNA sequence from clone RP11-77O2 on chromosome 13, complete
             sequence
          Length = 62107

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 308   acatctggtaagagcatatt 327
             ||||||||||||||||||||
Sbjct: 41068 acatctggtaagagcatatt 41087



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>emb|AL662812.12| Mouse DNA sequence from clone RP23-48A2 on chromosome 11 Contains the
              gene for a novel protein similar to smoothelin Smtn, three
              novel genes, the Mybbp1a gene for MYB binding protein
              (P160) 1a, a ribosomal protein 7a (Rpl7a) pseudogene, the
              5' end of the Ube2g1 gene for ubiquitin-conjugating enzyme
              E2G 1 (UBC7 homolog, C. elegans) and four CpG islands,
              complete sequence
          Length = 258521

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 344    gttgctgctgccaccaccca 363
              ||||||||||||||||||||
Sbjct: 251375 gttgctgctgccaccaccca 251356



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>emb|AL161579.2|ATCHRIV75 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 75
          Length = 196242

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                              
Query: 486    ctatactcaatgtaatttccgccaccaatcatgaaaacaattgcttct 533
              ||||| |||||||| || || |||||||||||||| || || ||||||
Sbjct: 130163 ctatattcaatgtagttacctccaccaatcatgaagactatggcttct 130116



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>emb|AL031004.1|ATF28M20 Arabidopsis thaliana DNA chromosome 4, BAC clone F28M20 (ESSAII
             project)
          Length = 90902

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                             
Query: 486   ctatactcaatgtaatttccgccaccaatcatgaaaacaattgcttct 533
             ||||| |||||||| || || |||||||||||||| || || ||||||
Sbjct: 23108 ctatattcaatgtagttacctccaccaatcatgaagactatggcttct 23155



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>gb|AC114777.4| Homo sapiens BAC clone RP11-496D24 from 4, complete sequence
          Length = 52417

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 345   ttgctgctgccaccacccaa 364
             ||||||||||||||||||||
Sbjct: 35194 ttgctgctgccaccacccaa 35175



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>gb|AC115594.2| Dictyostelium discoideum chromosome 2 map 4071862-4101005 strain AX4,
             complete sequence
          Length = 29143

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 148   attgataactcattcaaagcagcg 171
             ||||||||||| ||||||||||||
Sbjct: 19246 attgataactccttcaaagcagcg 19223



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>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome
          Length = 6413771

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 392     ttgctgaataaattccacac 411
               ||||||||||||||||||||
Sbjct: 4726152 ttgctgaataaattccacac 4726133



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>emb|BX293537.10| Mouse DNA sequence from clone RP23-240M8 on chromosome X, complete
              sequence
          Length = 163726

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 357    ccacccaatcccgctttctg 376
              ||||||||||||||||||||
Sbjct: 143792 ccacccaatcccgctttctg 143773



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>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 624     ccttccatgagggcttcaac 643
               ||||||||||||||||||||
Sbjct: 3429453 ccttccatgagggcttcaac 3429472



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>gb|AF081854.1|AF081854 Nocomis biguttatus 12S ribosomal RNA gene, partial sequence; tRNA-Val
            gene, complete sequence; and 16S ribosomal RNA gene,
            partial sequence, mitochondrial genes for mitochondrial
            RNAs
          Length = 1895

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 483  ctcctatactcaatgtaatt 502
            ||||||||||||||||||||
Sbjct: 1166 ctcctatactcaatgtaatt 1147



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>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome
          Length = 1751080

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 145    tgtattgataactcattcaa 164
              ||||||||||||||||||||
Sbjct: 241689 tgtattgataactcattcaa 241670



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>dbj|AP006644.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT06I23, TM0253,
             complete sequence
          Length = 85813

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 434   atatatgacatgctttgaag 453
             ||||||||||||||||||||
Sbjct: 80610 atatatgacatgctttgaag 80629



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>gb|AC165235.11| Mus musculus chromosome 8, clone RP23-332G19, complete sequence
          Length = 220008

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 138   aaatctttgtattgataactcatt 161
             ||||||||||||| ||||||||||
Sbjct: 62554 aaatctttgtatttataactcatt 62577


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,614,799
Number of Sequences: 3902068
Number of extensions: 5614799
Number of successful extensions: 103811
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 103585
Number of HSP's gapped (non-prelim): 213
length of query: 660
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 637
effective length of database: 17,143,297,704
effective search space: 10920280637448
effective search space used: 10920280637448
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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