>gb|AY485643.1| Hordeum vulgare subsp. vulgare BAC 615K1, complete sequence
          Length = 114996

 Score =  147 bits (74), Expect = 2e-32
 Identities = 116/130 (89%)
 Strand = Plus / Plus

                                                                         
Query: 118   agctccaaaaacacataataagctcaaattggcttaagaaccttggttagctcattaata 177
             ||||||||||   ||||||||||||||| |||| |||||||||||||||||||| |||||
Sbjct: 23758 agctccaaaataccataataagctcaaaatggcataagaaccttggttagctcagtaata 23817

                                                                         
Query: 178   ttatgtacttagcctgttttcctctaaaatgacataactagcccatttagctccaaatag 237
             |||| ||||||||  ||||||||||||||||  |||| ||||||||||||||| ||| ||
Sbjct: 23818 ttatatacttagctagttttcctctaaaatgggataattagcccatttagctcaaaaaag 23877

                       
Query: 238   acatacttag 247
             ||||||||||
Sbjct: 23878 acatacttag 23887



 Score =  133 bits (67), Expect = 3e-28
 Identities = 109/123 (88%)
 Strand = Plus / Plus

                                                                         
Query: 118   agctccaaaaacacataataagctcaaattggcttaagaaccttggttagctcattaata 177
             ||||||||||   ||||||||||||||| |||| ||||||||||||||| ||||||||||
Sbjct: 23374 agctccaaaataccataataagctcaaaatggcataagaaccttggttaactcattaata 23433

                                                                         
Query: 178   ttatgtacttagcctgttttcctctaaaatgacataactagcccatttagctccaaatag 237
             |||| |||||||| |||||| ||||||||||  |||| ||||||||||||||| ||| ||
Sbjct: 23434 ttatatacttagcttgtttttctctaaaatgggataattagcccatttagctcaaaaaag 23493

                
Query: 238   aca 240
             |||
Sbjct: 23494 aca 23496



 Score =  115 bits (58), Expect = 7e-23
 Identities = 86/94 (91%), Gaps = 1/94 (1%)
 Strand = Plus / Plus

                                                                         
Query: 154   agaaccttggttagctcattaatattatgtacttagcctgttttcctctaaaatgacata 213
             |||||||||||||||||||||||||||| |||||||| |||||||||||||||||  |||
Sbjct: 23014 agaaccttggttagctcattaatattatatacttagcttgttttcctctaaaatgggata 23073

                                               
Query: 214   actagcccatttagctccaaatagacatacttag 247
             | |||||||||||||| |||| ||||||| ||||
Sbjct: 23074 attagcccatttagct-caaaaagacataattag 23106



 Score =  113 bits (57), Expect = 3e-22
 Identities = 87/97 (89%)
 Strand = Plus / Plus

                                                                         
Query: 118   agctccaaaaacacataataagctcaaattggcttaagaaccttggttagctcattaata 177
             ||||||||||   |||||||| |||||| |||| ||||||||||||||||||||  ||||
Sbjct: 24155 agctccaaaatgccataataacctcaaaatggcataagaaccttggttagctcacgaata 24214

                                                  
Query: 178   ttatgtacttagcctgttttcctctaaaatgacataa 214
             |||| |||||||| |||||||||||||||||||||||
Sbjct: 24215 ttatatacttagcttgttttcctctaaaatgacataa 24251



 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                           
Query: 205   aatgacataactagcccatttagctccaaa 234
             |||||||||| |||||||||||||||||||
Sbjct: 24134 aatgacataattagcccatttagctccaaa 24163



 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                           
Query: 205   aatgacataactagcccatttagctccaaa 234
             |||||||||| |||||||||||||||||||
Sbjct: 23737 aatgacataattagcccatttagctccaaa 23766



 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                           
Query: 205   aatgacataactagcccatttagctccaaa 234
             |||||||||| |||||||||||||||||||
Sbjct: 23353 aatgacataattagcccatttagctccaaa 23382



 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                           
Query: 205   aatgacataactagcccatttagctccaaa 234
             |||||||||| |||||||||||||||||||
Sbjct: 14024 aatgacataattagcccatttagctccaaa 14053



 Score = 46.1 bits (23), Expect = 0.052
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 80    cataagaaccttggttagctcac 102
             |||||||||||||||||||||||
Sbjct: 24187 cataagaaccttggttagctcac 24209



 Score = 44.1 bits (22), Expect = 0.21
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 80    cataagaaccttggttagctca 101
             ||||||||||||||||||||||
Sbjct: 23790 cataagaaccttggttagctca 23811



 Score = 42.1 bits (21), Expect = 0.81
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                      
Query: 118   agctccaaaaacacataataagctcaaattggcttaagaac 158
             ||||||||||   ||||||||||||||| |||| |||||||
Sbjct: 14045 agctccaaaataccataataagctcaaaatggcataagaac 14085

>gb|AC104246.3| Homo sapiens chromosome 8, clone RP11-1073L1, complete sequence
          Length = 170284

 Score = 46.1 bits (23), Expect = 0.052
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 123    caaaaacacataataagctcaaa 145
              |||||||||||||||||||||||
Sbjct: 163138 caaaaacacataataagctcaaa 163160

>gb|AC046174.6| Homo sapiens chromosome 8, clone RP11-621B3, complete sequence
          Length = 161619

 Score = 46.1 bits (23), Expect = 0.052
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 123   caaaaacacataataagctcaaa 145
             |||||||||||||||||||||||
Sbjct: 51514 caaaaacacataataagctcaaa 51536

>emb|CR450771.10| Zebrafish DNA sequence from clone CH211-152D1 in linkage group 2,
            complete sequence
          Length = 152893

 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 189  gcctgttttcctctaaaatga 209
            |||||||||||||||||||||
Sbjct: 7813 gcctgttttcctctaaaatga 7833

>gb|AC114801.4| Homo sapiens BAC clone RP11-777B9 from 4, complete sequence
          Length = 69745

 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 127   aacacataataagctcaaatt 147
             |||||||||||||||||||||
Sbjct: 26559 aacacataataagctcaaatt 26579

>ref|XM_448744.1| Candida glabrata CBS138, CAGL0K12166g partial mRNA
          Length = 2295

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 86  aaccttggttagctcactaa 105
           ||||||||||||||||||||
Sbjct: 807 aaccttggttagctcactaa 788

>gb|AC099571.3| Homo sapiens chromosome 1 clone RP11-438H8, complete sequence
          Length = 167231

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 76    acatcataagaaccttggtt 95
             ||||||||||||||||||||
Sbjct: 59812 acatcataagaaccttggtt 59831

>emb|AL449105.22| Human DNA sequence from clone RP11-9H12 on chromosome 9q32-33.3,
             complete sequence
          Length = 107164

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 168   ctcattaatattatgtactt 187
             ||||||||||||||||||||
Sbjct: 60639 ctcattaatattatgtactt 60658

>emb|AL137018.9| Human DNA sequence from clone RP11-133M9 on chromosome 9q13-21.33
              Contains the 3' end of the RORB gene for RAR-related orphan
              receptor B protein (RZRB, ROR-BETA), complete sequence
          Length = 157168

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 167    gctcattaatattatgtact 186
              ||||||||||||||||||||
Sbjct: 149502 gctcattaatattatgtact 149483

>emb|CR380957.1| Candida glabrata strain CBS138 chromosome K complete sequence
          Length = 1302002

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 86      aaccttggttagctcactaa 105
               ||||||||||||||||||||
Sbjct: 1189920 aaccttggttagctcactaa 1189939

>emb|AL935261.1| Lactobacillus plantarum strain WCFS1 complete genome; segment 10/11
          Length = 298050

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 69     aggtaaaacatcataagaac 88
              ||||||||||||||||||||
Sbjct: 121982 aggtaaaacatcataagaac 122001

>emb|BX537748.1|HSM805831 Homo sapiens genomic DNA; cDNA DKFZp686B0788 (from clone
            DKFZp686B0788)
          Length = 9387

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 167  gctcattaatattatgtact 186
            ||||||||||||||||||||
Sbjct: 8226 gctcattaatattatgtact 8207

>gb|AC091904.2| Homo sapiens chromosome 5 clone RP11-18M19, complete sequence
          Length = 63891

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 2     gcttattttccccaacaaag 21
             ||||||||||||||||||||
Sbjct: 37492 gcttattttccccaacaaag 37511

>gb|AC114298.2| Homo sapiens chromosome 5 clone RP11-12C2, complete sequence
          Length = 88787

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 2     gcttattttccccaacaaag 21
             ||||||||||||||||||||
Sbjct: 53536 gcttattttccccaacaaag 53517

>gb|AC124409.5| Mus musculus BAC clone RP24-262P14 from 8, complete sequence
          Length = 178779

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 44    ccaaaataagataattagct 63
             ||||||||||||||||||||
Sbjct: 62689 ccaaaataagataattagct 62708

>emb|AL606756.17| Mouse DNA sequence from clone RP23-265O19 on chromosome 3, complete
              sequence
          Length = 193976

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 138    agctcaaattggcttaagaa 157
              ||||||||||||||||||||
Sbjct: 129961 agctcaaattggcttaagaa 129942


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,533,132
Number of Sequences: 3902068
Number of extensions: 2533132
Number of successful extensions: 54262
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 54216
Number of HSP's gapped (non-prelim): 46
length of query: 249
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 227
effective length of database: 17,147,199,772
effective search space: 3892414348244
effective search space used: 3892414348244
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)