ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal1k04 |
|---|---|
| Clone Library Name | barley_pub |
>KIN11_ARATH (P92958) SNF1-related protein kinase catalytic alpha subunit KIN11| (EC 2.7.11.1) (AKIN11) (AKIN alpha1) Length = 512 Score = 89.4 bits (220), Expect = 8e-18 Identities = 48/82 (58%), Positives = 56/82 (68%), Gaps = 3/82 (3%) Frame = -1 Query: 646 ALQELNVYXKKIGHYNMKCRWSPGF-PGQDNMNHTNYNFIAEP--IETDDVGDKLNLIKF 476 ALQELNV KKIGHYNMKCRW PG GQ+ M + +F E IE D +IKF Sbjct: 413 ALQELNVCWKKIGHYNMKCRWVPGLADGQNTMVNNQLHFRDESSIIEDDCAMTSPTVIKF 472 Query: 475 ELQLYKTKDEKYLLDLQRASGP 410 ELQLYK ++EKYLLD+QR +GP Sbjct: 473 ELQLYKAREEKYLLDIQRVNGP 494
>KIN10_ARATH (Q38997) SNF1-related protein kinase catalytic alpha subunit KIN10| (EC 2.7.11.1) (AKIN10) (AKIN alpha2) Length = 535 Score = 86.3 bits (212), Expect = 7e-17 Identities = 50/102 (49%), Positives = 57/102 (55%), Gaps = 5/102 (4%) Frame = -1 Query: 646 ALQELNVYXKKIGHYNMKCRWSPGFPGQ---DNMNHTNYNFIAEP--IETDDVGDKLNLI 482 ALQ+LNV KKIGHYNMKCRW P N H N F E IE + N++ Sbjct: 434 ALQDLNVCWKKIGHYNMKCRWVPNSSADGMLSNSMHDNNYFGDESSIIENEAAVKSPNVV 493 Query: 481 KFELQLYKTKDEKYLLDLQRASGPHXXXXXXXXXXXXXLRVL 356 KFE+QLYKT+D+KYLLDLQR GP LRVL Sbjct: 494 KFEIQLYKTRDDKYLLDLQRVQGPQFLFLDLCAAFLAQLRVL 535
>RKIN1_SECCE (Q02723) Carbon catabolite derepressing protein kinase (EC| 2.7.11.1) Length = 502 Score = 82.0 bits (201), Expect = 1e-15 Identities = 50/102 (49%), Positives = 62/102 (60%), Gaps = 5/102 (4%) Frame = -1 Query: 646 ALQELNVYXKKIGH-YNMKCRWSPGFPG-QDNMNHTNYNFIAEPIETD--DVGDKLN-LI 482 AL+ELNV KK G YNMKCRW PGFP D + N++F+ + D D +L +I Sbjct: 401 ALKELNVCWKKNGDCYNMKCRWCPGFPRVSDMLLDANHSFVDDCAIKDNGDANSRLPAVI 460 Query: 481 KFELQLYKTKDEKYLLDLQRASGPHXXXXXXXXXXXXXLRVL 356 KFE+QLYKTKD+KYLLD+QR +GP LRVL Sbjct: 461 KFEIQLYKTKDDKYLLDMQRVTGPQLLFLEFCAAFLTNLRVL 502
>BEV1L_BETVE (P43185) Major pollen allergen Bet v 1-L (Bet v I-L)| Length = 159 Score = 31.6 bits (70), Expect = 2.1 Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 6/55 (10%) Frame = -1 Query: 595 KCRWSPGFPGQ------DNMNHTNYNFIAEPIETDDVGDKLNLIKFELQLYKTKD 449 K + GFP + D ++HTN+ + IE VGD L I E+++ T D Sbjct: 55 KINFPEGFPFKYVKDRVDEVDHTNFKYNYSVIEGGPVGDTLEKISNEIKIVATPD 109
>BEV1G_BETVE (P43180) Major pollen allergen Bet v 1-G (Bet v I-G)| Length = 159 Score = 31.6 bits (70), Expect = 2.1 Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 6/55 (10%) Frame = -1 Query: 595 KCRWSPGFPGQ------DNMNHTNYNFIAEPIETDDVGDKLNLIKFELQLYKTKD 449 K + GFP + D ++HTN+ + IE VGD L I E+++ T D Sbjct: 55 KINFPEGFPFKYVKDRVDEVDHTNFKYNYSVIEGGPVGDTLEKISNEIKIVATPD 109
>BEV1D_BETVE (P43177) Major pollen allergen Bet v 1-D/H (Bet v I-D/H)| Length = 159 Score = 31.6 bits (70), Expect = 2.1 Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 6/55 (10%) Frame = -1 Query: 595 KCRWSPGFPGQ------DNMNHTNYNFIAEPIETDDVGDKLNLIKFELQLYKTKD 449 K + GFP + D ++HTN+ + IE VGD L I E+++ T D Sbjct: 55 KINFPEGFPFKYVKDRVDEVDHTNFKYNYSVIEGGPVGDTLEKISNEIKIVATPD 109
>BEV1A_BETVE (P15494) Major pollen allergen Bet v 1-A (Bet v I-A)| Length = 159 Score = 31.2 bits (69), Expect = 2.7 Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 6/62 (9%) Frame = -1 Query: 595 KCRWSPGFPGQ------DNMNHTNYNFIAEPIETDDVGDKLNLIKFELQLYKTKDEKYLL 434 K + GFP + D ++HTN+ + IE +GD L I E+++ T D +L Sbjct: 55 KISFPEGFPFKYVKDRVDEVDHTNFKYNYSVIEGGPIGDTLEKISNEIKIVATPDGGSIL 114 Query: 433 DL 428 + Sbjct: 115 KI 116
>BEV1J_BETVE (P43183) Major pollen allergen Bet v 1-J (Bet v I-J)| Length = 159 Score = 30.0 bits (66), Expect = 6.1 Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 6/62 (9%) Frame = -1 Query: 595 KCRWSPGFPGQ------DNMNHTNYNFIAEPIETDDVGDKLNLIKFELQLYKTKDEKYLL 434 K + GFP + D ++HTN+ + IE VGD L I E+++ T + +L Sbjct: 55 KISFPEGFPFKYVKDRVDEVDHTNFKYSYSVIEGGPVGDTLEKISNEIKIVATPNGGSIL 114 Query: 433 DL 428 + Sbjct: 115 KI 116
>BEV1F_BETVE (P43179) Major pollen allergen Bet v 1-F/I (Bet v I-F/I)| Length = 159 Score = 30.0 bits (66), Expect = 6.1 Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 6/62 (9%) Frame = -1 Query: 595 KCRWSPGFPGQ------DNMNHTNYNFIAEPIETDDVGDKLNLIKFELQLYKTKDEKYLL 434 K + GFP + D ++HTN+ + IE VGD L I E+++ T + +L Sbjct: 55 KISFPEGFPFKYVKDRVDEVDHTNFKYSYSVIEGGPVGDTLEKISNEIKIVATPNGGSIL 114 Query: 433 DL 428 + Sbjct: 115 KI 116
>Y835_RICCN (Q92HD6) Hypothetical UPF0192 protein RC0835 precursor| Length = 1892 Score = 29.6 bits (65), Expect = 8.0 Identities = 20/63 (31%), Positives = 29/63 (46%) Frame = -1 Query: 646 ALQELNVYXKKIGHYNMKCRWSPGFPGQDNMNHTNYNFIAEPIETDDVGDKLNLIKFELQ 467 A L + KKI + N S G NY++ + PIET+ DK+N+ E Sbjct: 917 AAPNLTLNLKKINYVNNLVADSNG----------NYSYSSVPIETNISSDKINITANESY 966 Query: 466 LYK 458 +YK Sbjct: 967 IYK 969
>MPAC2_CARBE (P38950) Major pollen allergen Car b 1 isoform 2 (Car b I)| Length = 159 Score = 29.6 bits (65), Expect = 8.0 Identities = 12/33 (36%), Positives = 21/33 (63%) Frame = -1 Query: 562 DNMNHTNYNFIAEPIETDDVGDKLNLIKFELQL 464 + ++HTN+ + IE D +GDKL + EL++ Sbjct: 72 EEIDHTNFKYNYTVIEGDVLGDKLEKVSHELKI 104 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 95,323,407 Number of Sequences: 219361 Number of extensions: 1992071 Number of successful extensions: 4912 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 4508 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4909 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6029593548 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
