ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags29k16 |
|---|---|
| Clone Library Name | barley_pub |
>RS3A_ORYSA (P49397) 40S ribosomal protein S3a (CYC07 protein)| Length = 261 Score = 336 bits (862), Expect = 3e-92 Identities = 171/191 (89%), Positives = 179/191 (93%), Gaps = 1/191 (0%) Frame = -1 Query: 659 LQNDEDQAYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDN 480 LQNDEDQAYRKIRLRAEDVQG NVLTNFWGM FTTDKLRSLV+KWQTLIEAHVDVKTTD Sbjct: 72 LQNDEDQAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVKKWQTLIEAHVDVKTTDG 131 Query: 479 YMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEV 300 YMLR+F IGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIM NQA+SCDLKELV+KFIPEV Sbjct: 132 YMLRLFCIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMANQASSCDLKELVSKFIPEV 191 Query: 299 IGKEIEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDY-KEDVGVKLDRPDGDEV 123 IGKEIEKATSSIFPLQNV+VRKVKILKAPKFDLGKLMEVHGDY KED+G KLDRP DE Sbjct: 192 IGKEIEKATSSIFPLQNVFVRKVKILKAPKFDLGKLMEVHGDYAKEDIGTKLDRPAEDEA 251 Query: 122 IPGAEEVAAAE 90 + G +EVAAAE Sbjct: 252 MAG-QEVAAAE 261
>RS3A_HELAN (P49198) 40S ribosomal protein S3a| Length = 259 Score = 311 bits (798), Expect = 8e-85 Identities = 155/189 (82%), Positives = 169/189 (89%) Frame = -1 Query: 659 LQNDEDQAYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDN 480 LQNDED +YRKIRLRAEDVQG NVLTNFWGMD TTDKLRSLV+KWQ+LIEAHVDVKTTDN Sbjct: 72 LQNDEDHSYRKIRLRAEDVQGKNVLTNFWGMDVTTDKLRSLVKKWQSLIEAHVDVKTTDN 131 Query: 479 YMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEV 300 + LRMF IGFTK+R NQVKRTCYAQ+SQI+QIRRKM EIMV QA +CDLKELV KFIPE Sbjct: 132 FTLRMFCIGFTKKRANQVKRTCYAQSSQIKQIRRKMREIMVTQAQTCDLKELVQKFIPES 191 Query: 299 IGKEIEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDYKEDVGVKLDRPDGDEVI 120 IG+EIEKATSSI+PLQNV++RKVKILKAPKFD+GKLMEVHGDY EDVGVKLDRP +E Sbjct: 192 IGREIEKATSSIYPLQNVFIRKVKILKAPKFDIGKLMEVHGDYSEDVGVKLDRP-AEEAA 250 Query: 119 PGAEEVAAA 93 P A EV A Sbjct: 251 PEATEVIGA 259
>RS3A_CATRO (P33444) 40S ribosomal protein S3a (CYC07 protein)| Length = 259 Score = 308 bits (789), Expect = 9e-84 Identities = 151/188 (80%), Positives = 166/188 (88%) Frame = -1 Query: 659 LQNDEDQAYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDN 480 LQ DED ++RKIRLRAED+QG NVLTNFWGMDFTTDKLRSLVRKWQ+LIEAHVDVKTTD+ Sbjct: 72 LQGDEDHSFRKIRLRAEDIQGKNVLTNFWGMDFTTDKLRSLVRKWQSLIEAHVDVKTTDS 131 Query: 479 YMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEV 300 Y LRMF IGFTK+R NQ KRTCYAQ+SQIRQIRRKM EIMVNQA SCDLK+LV KFIPE Sbjct: 132 YTLRMFCIGFTKKRANQQKRTCYAQSSQIRQIRRKMREIMVNQAQSCDLKDLVQKFIPES 191 Query: 299 IGKEIEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDYKEDVGVKLDRPDGDEVI 120 IG+EIEKATSSI+PLQNV++RKVKILKAPKFDLGKLMEVHGDY ED+G KLDRP + V Sbjct: 192 IGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYNEDIGTKLDRPAEEAVA 251 Query: 119 PGAEEVAA 96 E + A Sbjct: 252 EPTEVIGA 259
>RS3A_ARATH (Q42262) 40S ribosomal protein S3a| Length = 261 Score = 304 bits (779), Expect = 1e-82 Identities = 152/190 (80%), Positives = 165/190 (86%), Gaps = 1/190 (0%) Frame = -1 Query: 659 LQNDEDQAYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDN 480 LQNDED AYRKIRLRAEDVQG NVLT FWGMDFTTDKLRSLV+KWQTLIEAHVDVKTTD Sbjct: 72 LQNDEDNAYRKIRLRAEDVQGRNVLTQFWGMDFTTDKLRSLVKKWQTLIEAHVDVKTTDG 131 Query: 479 YMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEV 300 Y LRMF I FTKRR NQVKRTCYAQ+SQIRQIRRKM EIMV +A+SCDLKELV KFIPE Sbjct: 132 YTLRMFCIAFTKRRANQVKRTCYAQSSQIRQIRRKMSEIMVKEASSCDLKELVAKFIPEA 191 Query: 299 IGKEIEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDY-KEDVGVKLDRPDGDEV 123 IG+EIEKAT I+PLQNV++RKVKILKAPKFDLGKLMEVHGDY EDVGVK+DRP + + Sbjct: 192 IGREIEKATQGIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYTAEDVGVKVDRPADETM 251 Query: 122 IPGAEEVAAA 93 + E+ A Sbjct: 252 VEEPTEIIGA 261
>RS3A_BRARA (P49396) 40S ribosomal protein S3a (S phase-specific protein| BIS289) Length = 261 Score = 292 bits (747), Expect = 7e-79 Identities = 150/191 (78%), Positives = 164/191 (85%), Gaps = 2/191 (1%) Frame = -1 Query: 659 LQNDEDQAYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDN 480 L DEDQAYRKIRLRAEDVQG NVLT FWGMDFTTDKLRSLV+KWQTLIE+HVDVKTTDN Sbjct: 72 LNKDEDQAYRKIRLRAEDVQGRNVLTQFWGMDFTTDKLRSLVKKWQTLIESHVDVKTTDN 131 Query: 479 YMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMV-NQAASCDLKELVNKFIPE 303 Y LR+F I FTKRR NQVKRTCYAQ+SQIRQIR KM EIM+ +A+SCDLKELV KFIPE Sbjct: 132 YTLRLFCIAFTKRRANQVKRTCYAQSSQIRQIRSKMREIMIKEEASSCDLKELVAKFIPE 191 Query: 302 VIGKEIEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDY-KEDVGVKLDRPDGDE 126 IGK+IEKAT I+PLQNV++RKVKILKAPKFDL KLMEVHGDY EDVGVK+DRP DE Sbjct: 192 SIGKDIEKATQGIYPLQNVFIRKVKILKAPKFDLRKLMEVHGDYTAEDVGVKVDRP-ADE 250 Query: 125 VIPGAEEVAAA 93 V+ E+ A Sbjct: 251 VVEEPTEIIGA 261
>RS3A_TORRU (Q9XEG7) 40S ribosomal protein S3a| Length = 247 Score = 256 bits (655), Expect = 3e-68 Identities = 130/172 (75%), Positives = 149/172 (86%), Gaps = 1/172 (0%) Frame = -1 Query: 659 LQNDEDQAYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDN 480 LQNDEDQA+RKI+LRAEDVQG NVLTNFWGMDFTTDKLRSLVRKWQ+LI+AHVDVKTTDN Sbjct: 71 LQNDEDQAFRKIKLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQSLIQAHVDVKTTDN 130 Query: 479 YMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEV 300 Y +R+F I FTK+RPN R YAQ+SQI IRRKM EIMV +A +CDLKELV KFIPEV Sbjct: 131 YQIRIFCIAFTKKRPNHT-RNFYAQSSQI-AIRRKMREIMVKEAQTCDLKELVAKFIPEV 188 Query: 299 IGKEIEK-ATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDYKEDVGVKL 147 IGKEI++ + I+PLQ+ ++RKVKILKAPKFDL KLMEVHGDY E+VG K+ Sbjct: 189 IGKEIDEWRSQGIYPLQSTFIRKVKILKAPKFDLMKLMEVHGDYNEEVGAKI 240
>RS3A_TETNG (Q4T8S6) 40S ribosomal protein S3a| Length = 265 Score = 229 bits (585), Expect = 4e-60 Identities = 115/187 (61%), Positives = 144/187 (77%), Gaps = 9/187 (4%) Frame = -1 Query: 659 LQNDEDQAYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDN 480 LQNDE A+RK +L EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Sbjct: 73 LQNDE-VAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDG 131 Query: 479 YMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEV 300 Y+LR+F +GFTKRR NQ+++T YAQ Q+RQIR+KM+EIM + + DLKE+VNK IP+ Sbjct: 132 YLLRLFCVGFTKRRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDS 191 Query: 299 IGKEIEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD---------YKEDVGVKL 147 IGK+IEKA SI+PL +VYVRKVK+LK PKF+LGKLME+HG+ +D G K+ Sbjct: 192 IGKDIEKACQSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGAGTAAKATGDDTGAKV 251 Query: 146 DRPDGDE 126 +R DG E Sbjct: 252 ERADGYE 258
>RS3A_ORYLA (O73813) 40S ribosomal protein S3a (V-fos transformation effector| protein) Length = 265 Score = 228 bits (582), Expect = 9e-60 Identities = 114/187 (60%), Positives = 144/187 (77%), Gaps = 9/187 (4%) Frame = -1 Query: 659 LQNDEDQAYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDN 480 LQNDE A+RK +L EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Sbjct: 73 LQNDE-VAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDG 131 Query: 479 YMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEV 300 Y+LR+F +GFTK+R NQV++T YAQ Q+RQIR+KM+EIM + + DLKE+VNK IP+ Sbjct: 132 YLLRLFCVGFTKKRNNQVRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDS 191 Query: 299 IGKEIEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD---------YKEDVGVKL 147 +GK+IEKA SI+PL +VYVRKVK+LK PKF+LGKLME+HG+ +D G K+ Sbjct: 192 VGKDIEKACQSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGAGGAAKASGDDTGAKV 251 Query: 146 DRPDGDE 126 +R DG E Sbjct: 252 ERADGYE 258
>RS3A_XENTR (Q642T2) 40S ribosomal protein S3a| Length = 263 Score = 228 bits (580), Expect = 2e-59 Identities = 113/185 (61%), Positives = 144/185 (77%), Gaps = 7/185 (3%) Frame = -1 Query: 659 LQNDEDQAYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDN 480 LQNDE A+RK +L EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Sbjct: 73 LQNDE-VAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDG 131 Query: 479 YMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEV 300 Y+LR+F +GFTK+R NQ+++T YAQ Q+RQIR+KM+EIM + + DLKE+VNK IP+ Sbjct: 132 YLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDS 191 Query: 299 IGKEIEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD-------YKEDVGVKLDR 141 IGK+IEKA SI+PL +VYVRKVK+LK PKF+LGKLME+HG+ ++ G K++R Sbjct: 192 IGKDIEKACQSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGGAGKPAGDETGAKVER 251 Query: 140 PDGDE 126 DG E Sbjct: 252 ADGYE 256
>RS3A_BRARE (Q6PBY1) 40S ribosomal protein S3a| Length = 266 Score = 228 bits (580), Expect = 2e-59 Identities = 113/188 (60%), Positives = 144/188 (76%), Gaps = 10/188 (5%) Frame = -1 Query: 659 LQNDEDQAYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDN 480 LQNDE A+RK +L EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Sbjct: 73 LQNDE-VAFRKFKLVTEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDG 131 Query: 479 YMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEV 300 Y+LR+F +GFTK+R NQ+++T YAQ Q+RQIR+KM+EIM + + DLKE+VNK IP+ Sbjct: 132 YLLRLFCVGFTKKRTNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDS 191 Query: 299 IGKEIEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD----------YKEDVGVK 150 +GK+IEKA SI+PL +VYVRKVK+LK PKF+LGKLME+HG+ + D G K Sbjct: 192 VGKDIEKACQSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGSTSAAAKPAEGDTGAK 251 Query: 149 LDRPDGDE 126 ++R DG E Sbjct: 252 VERADGYE 259
>RS3A_XENLA (Q801S3) 40S ribosomal protein S3a| Length = 263 Score = 227 bits (578), Expect = 3e-59 Identities = 113/185 (61%), Positives = 143/185 (77%), Gaps = 7/185 (3%) Frame = -1 Query: 659 LQNDEDQAYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDN 480 LQNDE A+RK +L EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Sbjct: 73 LQNDE-VAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDG 131 Query: 479 YMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEV 300 Y+LR+F +GFTK+R NQ+++T YAQ Q+RQIR+KM EIM + + DLKE+VNK IP+ Sbjct: 132 YLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMFEIMTREVQTNDLKEVVNKLIPDS 191 Query: 299 IGKEIEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD-------YKEDVGVKLDR 141 IGK+IEKA SI+PL +VYVRKVK+LK PKF+LGKLME+HG+ ++ G K++R Sbjct: 192 IGKDIEKACQSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGGTGKPAGDETGAKVER 251 Query: 140 PDGDE 126 DG E Sbjct: 252 ADGYE 256
>RS3A_EIMTE (O43999) 40S ribosomal protein S3a (EtS3a)| Length = 263 Score = 227 bits (578), Expect = 3e-59 Identities = 113/185 (61%), Positives = 144/185 (77%), Gaps = 7/185 (3%) Frame = -1 Query: 659 LQNDEDQAYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDN 480 LQNDE A+RK +L EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Sbjct: 73 LQNDE-VAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMFSMVKKWQTMIEAHVDVKTTDG 131 Query: 479 YMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEV 300 Y+LR+F +GFTK+R NQ+++T YAQ Q+RQIR+KM+EIM + + DLKE+VNK IP+ Sbjct: 132 YLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTGEFQTNDLKEVVNKLIPDS 191 Query: 299 IGKEIEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD-------YKEDVGVKLDR 141 IGK+IEKA SI+PL +VYVRKVK+LK PKF+LGKLME+HG+ ++ G K++R Sbjct: 192 IGKDIEKACQSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGGAGKPSGDEAGAKVER 251 Query: 140 PDGDE 126 DG E Sbjct: 252 ADGYE 256
>RS3A_OPHHA (Q98TX2) 40S ribosomal protein S3a| Length = 263 Score = 226 bits (577), Expect = 4e-59 Identities = 112/185 (60%), Positives = 143/185 (77%), Gaps = 7/185 (3%) Frame = -1 Query: 659 LQNDEDQAYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDN 480 LQNDE A+RK +L EDVQG N L NF GMD T DK+ S+V+KWQT+IEAH+DVKTTD Sbjct: 73 LQNDE-VAFRKFKLITEDVQGKNCLINFHGMDLTRDKMCSMVKKWQTMIEAHIDVKTTDG 131 Query: 479 YMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEV 300 Y+LR+F +GFTK+R NQ+++T YAQ Q+RQIR+KMVEIM + + DLKE+VNK IP+ Sbjct: 132 YLLRLFCVGFTKKRTNQIRKTSYAQHQQVRQIRKKMVEIMTREVQTNDLKEVVNKLIPDS 191 Query: 299 IGKEIEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD-------YKEDVGVKLDR 141 IGK+IEKA SI+PL +VYVRKVK+LK PKF+LGKLME+HG+ ++ G K++R Sbjct: 192 IGKDIEKACQSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGGSGKPSGDETGAKVER 251 Query: 140 PDGDE 126 DG E Sbjct: 252 ADGYE 256
>RS3A_MACFA (Q4R4Z6) 40S ribosomal protein S3a| Length = 263 Score = 226 bits (577), Expect = 4e-59 Identities = 112/185 (60%), Positives = 144/185 (77%), Gaps = 7/185 (3%) Frame = -1 Query: 659 LQNDEDQAYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDN 480 LQNDE A+RK +L EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Sbjct: 73 LQNDE-VAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDG 131 Query: 479 YMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEV 300 Y+LR+F +GFTK+R NQ+++T YAQ Q+RQIR+KM+EIM + + DLKE+VNK IP+ Sbjct: 132 YLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDS 191 Query: 299 IGKEIEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDYK-------EDVGVKLDR 141 IGK+IEKA SI+PL +V+VRKVK+LK PKF+LGKLME+HG+ ++ G K++R Sbjct: 192 IGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVER 251 Query: 140 PDGDE 126 DG E Sbjct: 252 ADGYE 256
>RS3A_HUMAN (P61247) 40S ribosomal protein S3a| Length = 263 Score = 226 bits (577), Expect = 4e-59 Identities = 112/185 (60%), Positives = 144/185 (77%), Gaps = 7/185 (3%) Frame = -1 Query: 659 LQNDEDQAYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDN 480 LQNDE A+RK +L EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Sbjct: 73 LQNDE-VAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDG 131 Query: 479 YMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEV 300 Y+LR+F +GFTK+R NQ+++T YAQ Q+RQIR+KM+EIM + + DLKE+VNK IP+ Sbjct: 132 YLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDS 191 Query: 299 IGKEIEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDYK-------EDVGVKLDR 141 IGK+IEKA SI+PL +V+VRKVK+LK PKF+LGKLME+HG+ ++ G K++R Sbjct: 192 IGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVER 251 Query: 140 PDGDE 126 DG E Sbjct: 252 ADGYE 256
>RS3A_BOVIN (Q56JV9) 40S ribosomal protein S3a| Length = 263 Score = 226 bits (577), Expect = 4e-59 Identities = 112/185 (60%), Positives = 144/185 (77%), Gaps = 7/185 (3%) Frame = -1 Query: 659 LQNDEDQAYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDN 480 LQNDE A+RK +L EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Sbjct: 73 LQNDE-VAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDG 131 Query: 479 YMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEV 300 Y+LR+F +GFTK+R NQ+++T YAQ Q+RQIR+KM+EIM + + DLKE+VNK IP+ Sbjct: 132 YLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDS 191 Query: 299 IGKEIEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDYK-------EDVGVKLDR 141 IGK+IEKA SI+PL +V+VRKVK+LK PKF+LGKLME+HG+ ++ G K++R Sbjct: 192 IGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVER 251 Query: 140 PDGDE 126 DG E Sbjct: 252 ADGYE 256
>RS3A_FELCA (P61246) 40S ribosomal protein S3a (Fragment)| Length = 260 Score = 226 bits (577), Expect = 4e-59 Identities = 112/185 (60%), Positives = 144/185 (77%), Gaps = 7/185 (3%) Frame = -1 Query: 659 LQNDEDQAYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDN 480 LQNDE A+RK +L EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Sbjct: 70 LQNDE-VAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDG 128 Query: 479 YMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEV 300 Y+LR+F +GFTK+R NQ+++T YAQ Q+RQIR+KM+EIM + + DLKE+VNK IP+ Sbjct: 129 YLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDS 188 Query: 299 IGKEIEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDYK-------EDVGVKLDR 141 IGK+IEKA SI+PL +V+VRKVK+LK PKF+LGKLME+HG+ ++ G K++R Sbjct: 189 IGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVER 248 Query: 140 PDGDE 126 DG E Sbjct: 249 ADGYE 253
>RS3A_RAT (P49242) 40S ribosomal protein S3a (V-fos transformation effector| protein) [Contains: 40S ribosomal protein S3b] Length = 263 Score = 226 bits (576), Expect = 5e-59 Identities = 112/185 (60%), Positives = 144/185 (77%), Gaps = 7/185 (3%) Frame = -1 Query: 659 LQNDEDQAYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDN 480 LQNDE A+RK +L EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Sbjct: 73 LQNDE-VAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDG 131 Query: 479 YMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEV 300 Y+LR+F +GFTK+R NQ+++T YAQ Q+RQIR+KM+EIM + + DLKE+VNK IP+ Sbjct: 132 YLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDS 191 Query: 299 IGKEIEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD-------YKEDVGVKLDR 141 IGK+IEKA SI+PL +V+VRKVK+LK PKF+LGKLME+HG+ ++ G K++R Sbjct: 192 IGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGGSSGKTTGDETGAKVER 251 Query: 140 PDGDE 126 DG E Sbjct: 252 ADGYE 256
>RS3A_MOUSE (P97351) 40S ribosomal protein S3a| Length = 263 Score = 226 bits (576), Expect = 5e-59 Identities = 112/185 (60%), Positives = 144/185 (77%), Gaps = 7/185 (3%) Frame = -1 Query: 659 LQNDEDQAYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDN 480 LQNDE A+RK +L EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Sbjct: 73 LQNDE-VAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDG 131 Query: 479 YMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEV 300 Y+LR+F +GFTK+R NQ+++T YAQ Q+RQIR+KM+EIM + + DLKE+VNK IP+ Sbjct: 132 YLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDS 191 Query: 299 IGKEIEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD-------YKEDVGVKLDR 141 IGK+IEKA SI+PL +V+VRKVK+LK PKF+LGKLME+HG+ ++ G K++R Sbjct: 192 IGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGGSSGKAAGDETGAKVER 251 Query: 140 PDGDE 126 DG E Sbjct: 252 ADGYE 256
>RS3B_SCHPO (O94438) 40S ribosomal protein S3aE-B (S1-A)| Length = 251 Score = 226 bits (575), Expect = 6e-59 Identities = 110/171 (64%), Positives = 139/171 (81%) Frame = -1 Query: 659 LQNDEDQAYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDN 480 LQ DE+ A+RK++LR ED+QG + LT+F G+ T+DKLRSLVRKWQT IEA +KTTD Sbjct: 72 LQKDEEHAFRKVKLRVEDIQGKSCLTSFNGLSITSDKLRSLVRKWQTTIEADQTIKTTDG 131 Query: 479 YMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEV 300 Y+ R+F IGFT+RR NQVK+T YAQ+SQIR IR+KM +++ NQ +SC ++ELV K IPEV Sbjct: 132 YLCRVFVIGFTRRRANQVKKTTYAQSSQIRAIRQKMFQVIQNQTSSCSMRELVQKLIPEV 191 Query: 299 IGKEIEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDYKEDVGVKL 147 IG+EIE+AT SIFPLQNV VRKVKILKAPK D KL+E+HG+ +DVG K+ Sbjct: 192 IGREIERATGSIFPLQNVLVRKVKILKAPKHDAQKLLELHGE-SQDVGTKV 241
>RS3A_GECJA (Q6DV02) 40S ribosomal protein S3a| Length = 263 Score = 225 bits (574), Expect = 8e-59 Identities = 111/185 (60%), Positives = 144/185 (77%), Gaps = 7/185 (3%) Frame = -1 Query: 659 LQNDEDQAYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDN 480 LQNDE A+RK +L EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Sbjct: 73 LQNDE-VAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDG 131 Query: 479 YMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEV 300 Y+LR+F +GFTK+R NQ+++T YAQ Q+RQIR+KM+EIM + + DLKE+VNK IP+ Sbjct: 132 YLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDS 191 Query: 299 IGKEIEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDYK-------EDVGVKLDR 141 IGK++EKA SI+PL +V+VRKVK+LK PKF+LGKLME+HG+ ++ G K++R Sbjct: 192 IGKDMEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVER 251 Query: 140 PDGDE 126 DG E Sbjct: 252 ADGYE 256
>RS3A_CANAL (P40910) 40S ribosomal protein S3aE (S1)| Length = 255 Score = 225 bits (573), Expect = 1e-58 Identities = 107/181 (59%), Positives = 147/181 (81%), Gaps = 1/181 (0%) Frame = -1 Query: 659 LQNDEDQAYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDN 480 LQ ED +YRKI+LR ++VQG N+LTNF G+DFT+DKLRSLVRKWQ+L+EA+V VKT+D+ Sbjct: 72 LQGSEDHSYRKIKLRVDEVQGKNLLTNFHGLDFTSDKLRSLVRKWQSLVEANVTVKTSDD 131 Query: 479 YMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEV 300 Y+LR+FAI FTKR+PNQ+K T YAQ+S++R+ R+KM+EI+ + ++C L +L +K IPEV Sbjct: 132 YVLRVFAIAFTKRQPNQIKETTYAQSSKLREARKKMIEIIEREVSNCTLAQLTSKLIPEV 191 Query: 299 IGKEIEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD-YKEDVGVKLDRPDGDEV 123 IG+EIEK+T +IFPLQNV++RKVK+LK PKFD G L+ +HG+ E+ G K+ D V Sbjct: 192 IGREIEKSTQTIFPLQNVHIRKVKLLKQPKFDWGSLLALHGEGSTEEKGKKVSSGFKDVV 251 Query: 122 I 120 + Sbjct: 252 L 252
>RS3A_APLCA (P49395) 40S ribosomal protein S3a (Lysine-rich protein KRP-A)| Length = 264 Score = 220 bits (560), Expect = 3e-57 Identities = 112/186 (60%), Positives = 143/186 (76%), Gaps = 8/186 (4%) Frame = -1 Query: 659 LQNDEDQAYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDN 480 LQNDE +RK +L AE+VQG NVLTNF GM T DKL S+V+KWQTLIEA+VDVKTTD Sbjct: 73 LQNDE-VTFRKFKLIAEEVQGRNVLTNFSGMSLTRDKLCSMVKKWQTLIEANVDVKTTDG 131 Query: 479 YMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEV 300 Y+LR+FAIGFTK+R NQVK+TCYAQ +Q++ IR+KMVEI+ + +S D+KE+VNK IP+ Sbjct: 132 YLLRVFAIGFTKKRNNQVKKTCYAQHAQVKAIRKKMVEIVSREVSSNDMKEVVNKLIPDS 191 Query: 299 IGKEIEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD--------YKEDVGVKLD 144 IGK+IEK+ I+PL +V + KVK+LK PKFD+GKLME+HG+ + G K+D Sbjct: 192 IGKDIEKSCQGIYPLHDVLIHKVKVLKKPKFDVGKLMELHGEGSTTTSKGVTSEGGEKVD 251 Query: 143 RPDGDE 126 R DG E Sbjct: 252 RVDGYE 257
>RS3A_SCHPO (Q09781) 40S ribosomal protein S3aE-A (S1-A)| Length = 251 Score = 220 bits (560), Expect = 3e-57 Identities = 107/171 (62%), Positives = 138/171 (80%) Frame = -1 Query: 659 LQNDEDQAYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDN 480 LQ DE+ ++RK++LR ED+QG + LT+F G D T+DKLRSLVRKWQ+ IEA+ +KTTD Sbjct: 72 LQKDEEHSFRKVKLRVEDIQGKSCLTSFNGFDMTSDKLRSLVRKWQSTIEANQTIKTTDG 131 Query: 479 YMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEV 300 Y+ R+F IGFT RR NQVK+T YAQ+SQIR I +KM +++ NQA C +KELV K IPEV Sbjct: 132 YLCRIFVIGFTSRRVNQVKKTTYAQSSQIRAIHQKMFQVIQNQANGCSMKELVQKLIPEV 191 Query: 299 IGKEIEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDYKEDVGVKL 147 IG+ IEKAT++I+PLQNV+VRKVKILKAPK D KL+E+HG+ +DVG K+ Sbjct: 192 IGRAIEKATNNIYPLQNVFVRKVKILKAPKHDAQKLLELHGE-SQDVGSKV 241
>RS3B_YEAST (P23248) 40S ribosomal protein S1-B (RP10B)| Length = 254 Score = 211 bits (538), Expect = 1e-54 Identities = 101/162 (62%), Positives = 131/162 (80%) Frame = -1 Query: 659 LQNDEDQAYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDN 480 LQ ED ++RK++LR ++VQG N+LTNF GMDFTTDKLRS+VRKWQTLIEA+V VKT+D+ Sbjct: 72 LQGSEDHSFRKVKLRVDEVQGKNLLTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDD 131 Query: 479 YMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEV 300 Y+LR+FAI FT+++ NQVKR YAQ+S IR IR+ + EI+ + + L +L +K IPEV Sbjct: 132 YVLRIFAIAFTRKQANQVKRHSYAQSSHIRAIRKVISEILTREVQNSTLAQLTSKLIPEV 191 Query: 299 IGKEIEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD 174 I KEIE AT IFPLQN++VRKVK+LK PKFD+G LM +HG+ Sbjct: 192 INKEIENATKDIFPLQNIHVRKVKLLKQPKFDVGALMALHGE 233
>RS3A_YEAST (P33442) 40S ribosomal protein S1-A (RP10A)| Length = 254 Score = 211 bits (538), Expect = 1e-54 Identities = 102/162 (62%), Positives = 130/162 (80%) Frame = -1 Query: 659 LQNDEDQAYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDN 480 LQ ED ++RKI+LR ++VQG N+LTNF GMDFTTDKLRS+VRKWQTLIEA+V VKT+D+ Sbjct: 72 LQGSEDHSFRKIKLRVDEVQGKNLLTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDD 131 Query: 479 YMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEV 300 Y+LR+FAI FT+++ NQVKR YAQ+S IR IR+ + EI+ + L +L +K IPEV Sbjct: 132 YVLRIFAIAFTRKQANQVKRHSYAQSSHIRAIRKVISEILTKEVQGSTLAQLTSKLIPEV 191 Query: 299 IGKEIEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD 174 I KEIE AT IFPLQN++VRKVK+LK PKFD+G LM +HG+ Sbjct: 192 INKEIENATKDIFPLQNIHVRKVKLLKQPKFDVGALMALHGE 233
>RS3A_DROME (P55830) 40S ribosomal protein S3a (C3 protein)| Length = 267 Score = 197 bits (501), Expect = 2e-50 Identities = 96/183 (52%), Positives = 129/183 (70%), Gaps = 8/183 (4%) Frame = -1 Query: 650 DEDQAYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYML 471 D ++++RK RL AEDVQ NVL NF GMD TTDK RS+V+KWQTLIEA V+ KT D Y+L Sbjct: 78 DPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLL 137 Query: 470 RMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGK 291 R+F IGFT + ++TCYAQ SQ+R+IR +M +I+ N+ + DLK+LVNK + I K Sbjct: 138 RVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLVNKLALDSIAK 197 Query: 290 EIEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD--------YKEDVGVKLDRPD 135 +IEK+ I+PL +VY+RKVK+LK P+FD+ KL+E+HGD G +DRP+ Sbjct: 198 DIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELHGDGGGKSVEAVVSSEGAVIDRPE 257 Query: 134 GDE 126 G E Sbjct: 258 GYE 260
>RS3A_CAEEL (P48154) 40S ribosomal protein S3a| Length = 256 Score = 194 bits (493), Expect = 2e-49 Identities = 98/178 (55%), Positives = 127/178 (71%), Gaps = 2/178 (1%) Frame = -1 Query: 653 NDEDQAYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYM 474 N+ + +RK +L AEDVQG NVLTNF M T DKL S+V+KW TLIEA+ VKTTD Y Sbjct: 72 NNSEADFRKFKLIAEDVQGKNVLTNFHAMSMTHDKLCSIVKKWHTLIEANTAVKTTDGYT 131 Query: 473 LRMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIG 294 LR+F I FTK+ NQVK+T Y + S+IR+IR +M+ + + CDLKE+V+K IP+ IG Sbjct: 132 LRVFVIAFTKKSVNQVKKTSYTKTSKIRKIRSEMIGCIEKEVTGCDLKEVVSKLIPDSIG 191 Query: 293 KEIEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD--YKEDVGVKLDRPDGDE 126 K+IEK S ++PLQ VY+RKVKI+K PK DLG+L ++HGD G K+DRPD E Sbjct: 192 KDIEKTCSKLYPLQEVYIRKVKIIKRPKVDLGRLHDLHGDSITVGADGEKVDRPDDYE 249
>RS3A_ANOGA (P52813) 40S ribosomal protein S3a (C3 protein)| Length = 268 Score = 189 bits (479), Expect = 8e-48 Identities = 94/164 (57%), Positives = 120/164 (73%), Gaps = 2/164 (1%) Frame = -1 Query: 659 LQNDED--QAYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTT 486 LQN+ D +++RK +L AE V G +VLTNF GM TTDKLRS+V KWQTLIE VDVKTT Sbjct: 73 LQNEPDAERSFRKFKLVAESVNGRDVLTNFHGMALTTDKLRSMVNKWQTLIECSVDVKTT 132 Query: 485 DNYMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIP 306 D +MLR+F IGFT + ++TCYAQ SQI+ IR KM I+ + S DLK +V K +P Sbjct: 133 DGFMLRVFCIGFTIKDSMSQRKTCYAQHSQIKNIRAKMTAIIKREITSTDLKGVVEKLLP 192 Query: 305 EVIGKEIEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD 174 + I K+IEKA ++PL +VY+RKVK+LK P+FDL LME+HGD Sbjct: 193 DSIAKDIEKACQVVYPLHDVYIRKVKVLKKPRFDLSSLMELHGD 236
>RS3A_PYRFU (Q8TZE1) 30S ribosomal protein S3Ae| Length = 198 Score = 83.2 bits (204), Expect = 6e-16 Identities = 49/147 (33%), Positives = 76/147 (51%) Frame = -1 Query: 650 DEDQAYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYML 471 D +++ K+ + DV+G N T F GM +RSLVR+ T I+ ++ T D Y L Sbjct: 58 DFTKSHVKLYFQVYDVKGQNAYTKFKGMKLARSYIRSLVRRKTTRIDGIFNITTKDGYKL 117 Query: 470 RMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGK 291 R+ A+ RR Q SQ R IR+ M EI+ +A + K+ V + + I Sbjct: 118 RVMAMAIAMRR---------IQTSQERAIRKIMQEIIYKKAEELNFKDFVLESVNGKIAA 168 Query: 290 EIEKATSSIFPLQNVYVRKVKILKAPK 210 EI K I+PL+ +RK+K+L+ P+ Sbjct: 169 EIAKEAKKIYPLRKAEIRKIKVLEEPQ 195
>RS3A_METAC (Q8TKI9) 30S ribosomal protein S3Ae| Length = 203 Score = 81.6 bits (200), Expect = 2e-15 Identities = 50/149 (33%), Positives = 82/149 (55%) Frame = -1 Query: 659 LQNDEDQAYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDN 480 L ND + K+ LR +V G T+ G + TTD +RS+V++ + I+A+VDVKT D Sbjct: 55 LTNDMTKNNTKVILRINNVVGDIATTDLMGHELTTDYIRSIVKRQTSRIDANVDVKTKDG 114 Query: 479 YMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEV 300 Y++R+ FT +R A++SQ++ IR MVEI+ +AA D + + + I Sbjct: 115 YVIRVKPTCFTIKR---------ARSSQMQAIREMMVEIVKKRAAESDFETFMQEAILGR 165 Query: 299 IGKEIEKATSSIFPLQNVYVRKVKILKAP 213 + I + I+PL+ V +RK ++ P Sbjct: 166 LSAAIYRQAKFIYPLRRVEIRKTEVETIP 194
>RS3A_PYRHO (O57803) 30S ribosomal protein S3Ae| Length = 199 Score = 81.3 bits (199), Expect = 2e-15 Identities = 49/150 (32%), Positives = 75/150 (50%) Frame = -1 Query: 659 LQNDEDQAYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDN 480 + D + + K+ + DV+G N T F GM +RSLVR+ T I+ ++ T D Sbjct: 57 ITGDFTKGHVKLYFQVYDVKGQNAYTKFKGMKLARSYIRSLVRRRTTRIDGIFNITTKDG 116 Query: 479 YMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEV 300 Y LR+ A+ RR Q SQ R IR+ M EI+ +A + K+ V + + Sbjct: 117 YRLRVMAMAIAMRR---------IQTSQERAIRKIMQEIIYKKAEELNFKDFVLEAVNGK 167 Query: 299 IGKEIEKATSSIFPLQNVYVRKVKILKAPK 210 I EI K I+PL+ +RK+K+L P+ Sbjct: 168 IAAEIAKEGKKIYPLKKAEIRKIKVLGEPE 197
>RS3A_ARCFU (O27964) 30S ribosomal protein S3Ae| Length = 211 Score = 80.5 bits (197), Expect = 4e-15 Identities = 50/151 (33%), Positives = 78/151 (51%), Gaps = 2/151 (1%) Frame = -1 Query: 659 LQND--EDQAYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTT 486 L ND Y+K+ + V G N T FW + T + L SL R+ + IE VDV T Sbjct: 56 LTNDYSNQNTYKKLIFKVYRVAGDNAYTKFWRFELTREYLNSLTRRRTSKIEDIVDVTTA 115 Query: 485 DNYMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIP 306 D Y LR+ ++ FT RR + SQ R IR M +I+V +A+S + + + + + Sbjct: 116 DGYKLRVKSVVFTVRR---------CKTSQKRAIRAIMRQIVVEKASSLNFVQFLQECVL 166 Query: 305 EVIGKEIEKATSSIFPLQNVYVRKVKILKAP 213 + EI K I+P++ V +RK+++L P Sbjct: 167 GKVPAEIYKNAKKIYPIRRVEIRKIELLAEP 197
>RS3A_PYRAB (Q9V2K7) 30S ribosomal protein S3Ae| Length = 199 Score = 79.7 bits (195), Expect = 7e-15 Identities = 48/140 (34%), Positives = 71/140 (50%) Frame = -1 Query: 629 KIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGF 450 K+ + DV+G N T F GM +RSLVR+ T I+ ++ T D Y LR+ A+ Sbjct: 66 KLYFQVYDVKGQNAYTKFKGMKLARSYIRSLVRRRTTRIDGIFNITTKDGYKLRVMAMVI 125 Query: 449 TKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATS 270 RR Q SQ R IR+ M EI+ +A + K+ V + + I EI K Sbjct: 126 AARR---------IQTSQERAIRKIMQEIIYKKAEELNFKDFVLEAVNGKIAAEIAKEAK 176 Query: 269 SIFPLQNVYVRKVKILKAPK 210 I+PL+ +RK+K+L P+ Sbjct: 177 KIYPLKKAEIRKIKVLGEPE 196
>RS3A_METKA (Q8TVD1) 30S ribosomal protein S3Ae| Length = 211 Score = 79.0 bits (193), Expect = 1e-14 Identities = 46/151 (30%), Positives = 80/151 (52%), Gaps = 4/151 (2%) Frame = -1 Query: 653 NDEDQAYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYM 474 +D + + K+ R DV+G + F G D +RSLVR+ + I+ +DV T D Y Sbjct: 50 DDITKHHIKVFFRIYDVEGTTAYSKFEGHRLMRDYVRSLVRRGTSRIDGVIDVVTKDGYK 109 Query: 473 LRMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFI----P 306 +R+ + FT RR A+ SQ R IR++M +++ A CD E + + + Sbjct: 110 VRVAGLAFTTRR---------AKTSQQRAIRKEMFKVIEENAKECDFDEFIRRCLSISEE 160 Query: 305 EVIGKEIEKATSSIFPLQNVYVRKVKILKAP 213 E I ++I++A I+P++ +RK ++L+ P Sbjct: 161 ESIPEQIKEAGRKIYPIRQAEIRKTEVLEEP 191
>RS3A_PYRAE (Q8ZT21) 30S ribosomal protein S3Ae| Length = 221 Score = 78.6 bits (192), Expect = 2e-14 Identities = 40/139 (28%), Positives = 75/139 (53%) Frame = -1 Query: 629 KIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGF 450 K++ + V+G+ LT F G++ T D +RSLVRK + + A +VKT D ++R+ +G Sbjct: 74 KLKFQIHRVEGLKALTRFKGLELTRDYIRSLVRKGTSKVTAITEVKTKDGMVMRIAVLGI 133 Query: 449 TKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATS 270 T R +++ +R+KM+E +V +AA D + + + + + ++ Sbjct: 134 TTHRIGTAQKSA---------MRKKMIETLVKKAAELDSGQFLKEILEGTLAADLFIVAK 184 Query: 269 SIFPLQNVYVRKVKILKAP 213 I P++ V + K+K+LK P Sbjct: 185 KIAPMRKVEIAKIKVLKYP 203
>RS3A_METMA (Q8Q0F2) 30S ribosomal protein S3Ae| Length = 204 Score = 76.6 bits (187), Expect = 6e-14 Identities = 46/149 (30%), Positives = 82/149 (55%) Frame = -1 Query: 659 LQNDEDQAYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDN 480 L ND + K+ LR +V G T+ G + TTD +RS+V++ + I+A+VDV+T D Sbjct: 55 LTNDMTKNNTKVILRVNNVVGDIATTDLMGHELTTDYVRSIVKRQTSRIDANVDVRTKDG 114 Query: 479 YMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEV 300 +++R+ FT +R A++SQ++ IR MV+I+ +A+ D + + + I Sbjct: 115 FVIRVKPTCFTIKR---------ARSSQMQAIREMMVDIVKKRASETDFETFMQEAILGR 165 Query: 299 IGKEIEKATSSIFPLQNVYVRKVKILKAP 213 + I + I+PL+ V +RK ++ P Sbjct: 166 LSAAIYRQAKFIYPLRRVEIRKTQVEAMP 194
>RS3A_SULTO (Q975F8) 30S ribosomal protein S3Ae| Length = 193 Score = 74.3 bits (181), Expect = 3e-13 Identities = 48/149 (32%), Positives = 73/149 (48%) Frame = -1 Query: 659 LQNDEDQAYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDN 480 L D Y + R V+G +LT F G + + D +RSLVR+ + I+A DV T D Sbjct: 53 LTGDYSLVYVHLYFRVIGVEGDRLLTRFAGHELSRDYIRSLVRRKSSKIDAITDVTTKDG 112 Query: 479 YMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEV 300 Y+LR+ + T R A SQ +IR+ + I+ +A+ E V + Sbjct: 113 YVLRVKGLALTTYR---------AHRSQKTEIRKIIWNILSTRASETTFDEFVQDIVFGK 163 Query: 299 IGKEIEKATSSIFPLQNVYVRKVKILKAP 213 + +I + I+PL+ V V K K+LKAP Sbjct: 164 LSNDIFQQAKKIYPLRKVEVEKTKLLKAP 192
>RS3A_METTH (O27630) 30S ribosomal protein S3Ae| Length = 195 Score = 72.4 bits (176), Expect = 1e-12 Identities = 44/149 (29%), Positives = 76/149 (51%) Frame = -1 Query: 659 LQNDEDQAYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDN 480 L D + Y K++ + + V G T F G TTD +RS++R+ + ++A V V+T D Sbjct: 55 LTGDFSKQYVKLKFQIDSVAGSEATTRFIGHQVTTDYVRSMIRRGTSRVDAPVIVETKDG 114 Query: 479 YMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEV 300 Y L++ + T RR A++SQ + +R+ + E + A+ +ELV + Sbjct: 115 YKLKVHPLAITIRR---------AKSSQQKYMRQSIEEHLREIASEKTFEELVEGIVTGK 165 Query: 299 IGKEIEKATSSIFPLQNVYVRKVKILKAP 213 I EI I+PL+ V + K ++L+ P Sbjct: 166 IASEIYHQAKKIYPLKRVEIIKSRVLEEP 194
>RS3A_PYRKO (Q5JGM4) 30S ribosomal protein S3Ae| Length = 200 Score = 71.2 bits (173), Expect = 3e-12 Identities = 44/149 (29%), Positives = 71/149 (47%) Frame = -1 Query: 659 LQNDEDQAYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDN 480 L D + + K+ + DV+G N T F G +RSLVR+ T ++ ++ T D Sbjct: 59 LTGDFTKGHVKLYFQVYDVKGQNAYTKFKGHTLARSYIRSLVRRRTTRVDGIFNITTKDG 118 Query: 479 YMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEV 300 Y LR+ + RR Q SQ R IR+ + +I+ +A + + V + + Sbjct: 119 YKLRVMGMVIAYRR---------IQTSQERAIRKIIQDIIYKKAEELNFADFVLQSVNGQ 169 Query: 299 IGKEIEKATSSIFPLQNVYVRKVKILKAP 213 I EI K I+P++ VRK+K+L P Sbjct: 170 IASEIAKEARKIYPIKRAEVRKIKVLAEP 198
>RS3A_SULAC (Q4JB17) 30S ribosomal protein S3Ae| Length = 197 Score = 70.9 bits (172), Expect = 3e-12 Identities = 45/133 (33%), Positives = 68/133 (51%) Frame = -1 Query: 608 DVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQ 429 ++ G + T F+G + + D +RSLVR+ + I A VDV T D YMLR+ + T R Sbjct: 73 NISGDKLSTIFYGHELSRDYIRSLVRRKSSKINAVVDVTTKDGYMLRVKGLVLTTYR--- 129 Query: 428 VKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQN 249 A SQ IR+ + +I +A D + V I + +I + I+PL+ Sbjct: 130 ------AHISQKTAIRKVISDITRKKAEESDFDQFVQDVIFGKLSNDIFQEAKKIYPLRK 183 Query: 248 VYVRKVKILKAPK 210 V + K K+LKAPK Sbjct: 184 VEIEKTKLLKAPK 196
>RS3A_HALMA (Q5V296) 30S ribosomal protein S3Ae| Length = 213 Score = 70.1 bits (170), Expect = 6e-12 Identities = 47/177 (26%), Positives = 85/177 (48%) Frame = -1 Query: 659 LQNDEDQAYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDN 480 L ND + K+ + +V + T F + T D LRSLVR+ + +EA++ V TTD+ Sbjct: 52 LTNDASENNTKLTFKINEVASDSAYTEFIRHELTRDYLRSLVRRGSSKVEAYITVLTTDD 111 Query: 479 YMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEV 300 Y +++ + T ++ A ASQ + IRR M++++ A ++L++ + Sbjct: 112 YRVQIQPVAVTTKK---------ADASQEKAIRRTMIDLVRETAEDHTFEQLIDSVVEGR 162 Query: 299 IGKEIEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDYKEDVGVKLDRPDGD 129 + I I+PL+ V ++K + P+ EV + E+ V +D D D Sbjct: 163 LSSAIYGEAKDIYPLRRVEIKKTTLEARPE-------EVAAE--EETAVDVDEEDVD 210
>RS3A_SULSO (Q9UXD4) 30S ribosomal protein S3Ae| Length = 208 Score = 66.6 bits (161), Expect = 6e-11 Identities = 43/158 (27%), Positives = 79/158 (50%) Frame = -1 Query: 659 LQNDEDQAYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDN 480 L D Q Y + + +G ++T F G + + D LRSL+R+ + I + DV T D Sbjct: 54 LTGDFSQVYVHLYFKIIGNEGDRLITRFVGHELSRDYLRSLIRRKSSKINSIFDVTTKDG 113 Query: 479 YMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEV 300 Y++R+ + T + +Q ++T IR+ + E + +A+ + + + Sbjct: 114 YVVRVKGLVLTTYKCHQSQKTA---------IRKIINETVSKKASELSFDDFTQEVVFGR 164 Query: 299 IGKEIEKATSSIFPLQNVYVRKVKILKAPKFDLGKLME 186 + EI +A I+PL+ + K K+LK P+ +LGK +E Sbjct: 165 LANEIFEAAKKIYPLRKAEIEKTKVLKVPE-NLGKQVE 201
>RS3A_METJA (P54059) 30S ribosomal protein S3Ae| Length = 222 Score = 60.8 bits (146), Expect = 3e-09 Identities = 38/150 (25%), Positives = 73/150 (48%) Frame = -1 Query: 659 LQNDEDQAYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDN 480 L D + ++ + V G + ++G D T + ++S +R+ ++ I+A +DVKT D Sbjct: 62 LTGDPTKHMHRVYFKIFGVTGNKAIAQYYGHDTTREFMKSQIRRRRSRIDAILDVKTQDG 121 Query: 479 YMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEV 300 + +R A+ T R N +++ IR+KM EI+ A + V + Sbjct: 122 HKIRTKAMVLTAYRANTKQKS---------DIRKKMEEIIKAMAKEKTFPQYVQAMLFGE 172 Query: 299 IGKEIEKATSSIFPLQNVYVRKVKILKAPK 210 + ++I+ IFP++NV + K ++L K Sbjct: 173 MAEKIKNECKKIFPIKNVIIYKSEVLSLAK 202
>RS3A_HALSA (Q9HRA5) 30S ribosomal protein S3Ae| Length = 206 Score = 59.7 bits (143), Expect = 8e-09 Identities = 38/140 (27%), Positives = 67/140 (47%) Frame = -1 Query: 629 KIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGF 450 K+ + +DV + T F + T D RSLVR+ + + V V TTD+Y +R+ + + Sbjct: 61 KLTFQIDDVGSDSASTQFVQAELTRDYQRSLVRRGSSKVAVTVTVLTTDDYRVRIQPVAY 120 Query: 449 TKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATS 270 T ++ +Q SQ IRR M++++ + L+N I + I + Sbjct: 121 TTKQADQ---------SQQHAIRRTMIDLVEEAGEERTFEALLNSIIEGRLSSAIYDEAN 171 Query: 269 SIFPLQNVYVRKVKILKAPK 210 +I+PL+ V V K + P+ Sbjct: 172 TIYPLRRVEVEKATLEAHPE 191
>RS3A_AERPE (Q9YCV8) 30S ribosomal protein S3Ae| Length = 221 Score = 57.0 bits (136), Expect = 5e-08 Identities = 41/153 (26%), Positives = 70/153 (45%), Gaps = 4/153 (2%) Frame = -1 Query: 659 LQNDEDQAYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDN 480 + D + K+ + V+G T F G + D +R L R+ + + +V T D Sbjct: 59 ITGDYSYVHVKMYFQVVRVEGDTAYTRFKGHELLRDYIRGLTRRKSSKVTGIFNVWTKDG 118 Query: 479 YMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFI--- 309 Y LR+ A+ FT++R + SQ IR+ M EI+ +A L EL+ + Sbjct: 119 YGLRVTAMAFTRQR---------CKTSQKSAIRKVMQEIVEQKARESTLDELIQLMVFSD 169 Query: 308 -PEVIGKEIEKATSSIFPLQNVYVRKVKILKAP 213 + I+++ I+PL+ V + K K+L P Sbjct: 170 HEGSLAYLIDESARKIYPLRKVEIAKSKLLWVP 202
>RS3A_THEVO (Q978Z2) 30S ribosomal protein S3Ae| Length = 215 Score = 55.5 bits (132), Expect = 1e-07 Identities = 40/150 (26%), Positives = 70/150 (46%) Frame = -1 Query: 629 KIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGF 450 K R + +G T F G D +R LVR+ + I+ DVKT+DN ++ + + Sbjct: 66 KALFRITNCEGTKCKTIFIGHYIGDDYIRRLVRRRKERIDIIEDVKTSDNSIITVKIVVV 125 Query: 449 TKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATS 270 T + K+ QIR+ + + ++N+ S E V I + I ++ AT Sbjct: 126 TDGKVTNTKKF---------QIRKVLTDFILNKGLSLPYSEFVRYLIGDDIYNDMISATK 176 Query: 269 SIFPLQNVYVRKVKILKAPKFDLGKLMEVH 180 I+PL+ + VRK +++ L + E+H Sbjct: 177 DIYPLKKIEVRKSELV-----SLSGISEIH 201
>RS3A_THEAC (Q9HJ08) 30S ribosomal protein S3Ae| Length = 215 Score = 45.4 bits (106), Expect = 1e-04 Identities = 38/177 (21%), Positives = 75/177 (42%) Frame = -1 Query: 629 KIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGF 450 K R +G T F G D +R LVR+ + I+ DVKT+D ++ + + Sbjct: 66 KALFRITGCEGTKCKTIFIGHYIGDDYIRRLVRRRKERIDIIEDVKTSDGSIITVKIVVV 125 Query: 449 TKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATS 270 + + K++ +IR+ + +V++ + + V I + ++ +AT Sbjct: 126 SDGKLTNTKKS---------EIRKALTSFIVSKGSQLSYADFVRYLIGDDSYNDMVEATK 176 Query: 269 SIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDYKEDVGVKLDRPDGDEVIPGAEEVA 99 +I+PL+ + +RK +L+ + G + P +E PG E +A Sbjct: 177 NIYPLRKIEIRK-----------SELVSLSG---------MQEPQKNEPAPGGEAIA 213
>RS3A_PICTO (Q6KYU3) 30S ribosomal protein S3Ae| Length = 209 Score = 44.3 bits (103), Expect = 3e-04 Identities = 29/132 (21%), Positives = 59/132 (44%) Frame = -1 Query: 617 RAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRR 438 R ++ G T F G + D +R +VR+ + I+ + KT D Y L + + + + Sbjct: 69 RVKECTGKRCTTEFIGHKVSDDTIRRMVRRRKERIDIIMPSKTKDGYRLVIKIVLVSDSK 128 Query: 437 PNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFP 258 KR ++R K++ + + S L EL I + + +I ++P Sbjct: 129 LTANKRG---------EVRSKIIGFINERCGSMTLPELAQYIIGDNVYNDIVDTLKDVYP 179 Query: 257 LQNVYVRKVKIL 222 ++ + +RK ++L Sbjct: 180 IKKIEIRKSEVL 191
>RPOB_STRCO (Q9L0L0) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1161 Score = 29.6 bits (65), Expect = 8.3 Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Frame = -1 Query: 302 VIGKEIEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDYKEDVGVKL-DRPDGDE 126 ++GK K + + P + + +R + KA + L HG+ + +GV++ DR +GDE Sbjct: 788 LVGKVTPKGETELTPEERL-LRAIFGEKAREVRDTSLKVPHGEIGKVIGVRVFDREEGDE 846 Query: 125 VIPGAEEV 102 + PG ++ Sbjct: 847 LPPGVNQL 854
>RPOB_STRAW (Q82DQ5) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1181 Score = 29.6 bits (65), Expect = 8.3 Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Frame = -1 Query: 302 VIGKEIEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDYKEDVGVKL-DRPDGDE 126 ++GK K + + P + + +R + KA + L HG+ + +GV++ DR +GDE Sbjct: 808 LVGKVTPKGETELTPEERL-LRAIFGEKAREVRDTSLKVPHGEIGKVIGVRVFDREEGDE 866 Query: 125 VIPGAEEV 102 + PG ++ Sbjct: 867 LPPGVNQL 874
>PGK_MYCMS (P62415) Phosphoglycerate kinase (EC 2.7.2.3)| Length = 404 Score = 29.6 bits (65), Expect = 8.3 Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 3/93 (3%) Frame = -1 Query: 497 VKTTDNYMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVN 318 V T DN ++ F N K ++ S+I+ K+ + + A L+EL+N Sbjct: 33 VITDDNRIIAAFPT-INYLLENDAKIVLFSHLSRIKSKEDKLKKSLAPVAKR--LEELLN 89 Query: 317 K---FIPEVIGKEIEKATSSIFPLQNVYVRKVK 228 K FI + G+E+EKA SS+ + + V + Sbjct: 90 KQVKFINQTRGQELEKAISSLQSKEIILVENTR 122 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 85,990,274 Number of Sequences: 219361 Number of extensions: 1660543 Number of successful extensions: 4714 Number of sequences better than 10.0: 52 Number of HSP's better than 10.0 without gapping: 4562 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4692 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6314008338 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
