ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags29k15
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009302.1| Triticum aestivum clone wlm1.pk0014.e3:fis, full ... 571 e-160
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 72 2e-09
3gb|AC107315.1| Genomic sequence for Oryza sativa, Nipponbare str... 72 2e-09
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 72 2e-09
5dbj|AK119251.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 2e-09
6dbj|AK060769.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 2e-09
7gb|AY103776.1| Zea mays PCO077793 mRNA sequence 68 3e-08
8gb|AC150555.1| Drosophila melanogaster clone BACR26G12, complete... 42 1.7
9gb|AC100383.12| Mus musculus chromosome 6, clone RP23-132E3, com... 42 1.7
10emb|AL807373.1|NC21D9 Neurospora crassa DNA linkage group V cosm... 42 1.7
11gb|AC007299.18|AC007299 Drosophila melanogaster, chromosome 2L, ... 42 1.7
12gb|AC084652.1|CBRG45O11 Caenorhabditis briggsae cosmid G45O11, c... 42 1.7
13gb|AC007257.9|AC007257 Drosophila melanogaster, chromosome 2L, r... 42 1.7
14gb|AE003625.3| Drosophila melanogaster chromosome 2L, section 34... 42 1.7
15ref|XM_478238.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.7
16gb|AC149790.1| Pan troglodytes chromosome X clone PTB-089K20, co... 40 6.7
17ref|XM_452372.1| Kluyveromyces lactis NRRL Y-1140, KLLA0C03938g ... 40 6.7
18ref|XM_804221.1| Trypanosoma cruzi strain CL Brener protein kina... 40 6.7
19ref|XM_804530.1| Trypanosoma cruzi strain CL Brener protein kina... 40 6.7
20emb|AL583808.6| Human DNA sequence from clone RP11-262K1 on chro... 40 6.7
21emb|AL390037.16| Human DNA sequence from clone RP5-851M4 on chro... 40 6.7
22ref|XM_792977.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 6.7
23gb|AC116546.1| Homo sapiens 3 BAC RP11-312H1 (Roswell Park Cance... 40 6.7
24emb|CR382123.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso... 40 6.7
25emb|BX640408.8| Zebrafish DNA sequence from clone CH211-262L3 in... 40 6.7
26gb|AC013526.7| Homo sapiens, clone RP11-114I24, complete sequence 40 6.7
27gb|AC023344.4|AC023344 Homo sapiens BAC clone RP11-395G23 from 8... 40 6.7
28dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.7
29gb|AC022692.11| Homo sapiens chromosome 15, clone RP11-530L17, c... 40 6.7
30dbj|AP005177.4| Oryza sativa (japonica cultivar-group) genomic D... 40 6.7
31emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB1... 40 6.7
32emb|AL807248.7| Mouse DNA sequence from clone RP23-400M20 on chr... 40 6.7
33gb|AC012435.13| Homo sapiens chromosome 15, clone RP11-10O17, co... 40 6.7
34dbj|AP003353.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 6.7 
>gb|BT009302.1| Triticum aestivum clone wlm1.pk0014.e3:fis, full insert mRNA sequence
          Length = 1264

 Score =  571 bits (288), Expect = e-160
 Identities = 451/495 (91%), Gaps = 14/495 (2%)
 Strand = Plus / Minus

                                                                        
Query: 9    ttcctaatttcc-actgaaattggtcttaaaatgaatttc-caaacttctttctagactt 66
            |||||||||||| |||||||||| |||| |||| |||||| | | |||||  ||||||||
Sbjct: 1260 ttcctaatttcccactgaaattgatctttaaataaatttcaccagcttcta-ctagactt 1202

                                                                        
Query: 67   acgacaacagaatatggactacatcaaatacacaatcacatcctgaactgtatgacacca 126
            ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||
Sbjct: 1201 acgacaacagaatatggactacatcaaatacacaatcacatcctgaactgtatcacagca 1142

                                                                        
Query: 127  tgaacagaaaaa-gtggaaagtcatatataacactacaaaggcacgaaaaccgccggtat 185
            |||| ||||||| |||||||||||||||  | ||||||| |||||||||||| |||||||
Sbjct: 1141 tgaagagaaaaaagtggaaagtcatata--atactacaa-ggcacgaaaaccaccggtat 1085

                                                                        
Query: 186  ggatatcagcacaaggcctgaaagcgtttttgatgagaagt--aatatatgggtggcttc 243
            ||||  |||||||||||||||||||||||| ||||||||    |||||||||||||||||
Sbjct: 1084 ggat--cagcacaaggcctgaaagcgttttagatgagaaaataaatatatgggtggcttc 1027

                                                                        
Query: 244  agaccctttgaaatcattgggaaggcgagtcgccatactgccacgggttgaactcgatgg 303
            ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1026 agaccctttcaaatcattgggaaggcgagtcgccatactgccacgggttgaactcgatgg 967

                                                                        
Query: 304  agctgacgtccgtctcctcggcgacgaccacgctagagctgtctatcgcggcccggtgct 363
            |||||||||||||||||||||| |||    | ||||||||||||||||| ||||||||||
Sbjct: 966  agctgacgtccgtctcctcggcaacg---gcactagagctgtctatcgcagcccggtgct 910

                                                                        
Query: 364  cggtgtatctgccgttgtactcgtacacctccaggtcgccccacggggtaggggagatgt 423
            ||| ||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||
Sbjct: 909  cggcgtatctgccattgtactcatacacctccagatcgccccacggggtaggggagatgt 850

                                                                        
Query: 424  cttccgtcatcttgaaccattttggagtgaacttctcccccttggtgtcccggattttct 483
            |||| ||||| |||||||||||||| || |||| ||||||||||||||||||||||||||
Sbjct: 849  cttcggtcattttgaaccattttggtgtaaactgctcccccttggtgtcccggattttct 790

                           
Query: 484  tctcggctcgttgtt 498
            |||| |||| |||||
Sbjct: 789  tctcagctctttgtt 775
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 152/190 (80%), Gaps = 3/190 (1%)
 Strand = Plus / Minus

                                                                           
Query: 279     tactgccacgggttgaactcgatggagctgacgtccgtctcctcggcgacgaccacgcta 338
               ||||||||||||||||| ||||| ||  ||||||| || || ||| || |   ||| || 
Sbjct: 9196136 tactgccacgggttgaattcgatcgaagtgacgtctgtatcgtcgtcggc---cacactt 9196080

                                                                           
Query: 339     gagctgtctatcgcggcccggtgctcggtgtatctgccgttgtactcgtacacctccagg 398
               |||||||| || || || ||||||||||||||| | || ||||| || ||||| ||||| 
Sbjct: 9196079 gagctgtcaatggcagcgcggtgctcggtgtattttccattgtattcatacacttccagc 9196020

                                                                           
Query: 399     tcgccccacggggtaggggagatgtcttccgtcatcttgaaccattttggagtgaacttc 458
               |||||||| || ||||||| ||| || || ||| | || |||||| ||||||| || | |
Sbjct: 9196019 tcgccccagggtgtaggggcgatttcatcggtcctgttaaaccatcttggagtaaattgc 9195960

                         
Query: 459     tcccccttgg 468
               ||||||||||
Sbjct: 9195959 tcccccttgg 9195950



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                         
Query: 73      acagaatatggactacatcaaatacacaatcacatcctgaac 114
               |||| |||||||||||||| ||||||| ||||| ||||||||
Sbjct: 9196347 acagtatatggactacatcgaatacaccatcacttcctgaac 9196306



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 153     ataacactacaaaggcacgaaaac 176
               |||| |||||||||||||||||||
Sbjct: 9196271 ataatactacaaaggcacgaaaac 9196248
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>gb|AC107315.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0032O19, from chromosome 3, complete sequence
          Length = 142248

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 152/190 (80%), Gaps = 3/190 (1%)
 Strand = Plus / Plus

                                                                         
Query: 279   tactgccacgggttgaactcgatggagctgacgtccgtctcctcggcgacgaccacgcta 338
             ||||||||||||||||| ||||| ||  ||||||| || || ||| || |   ||| || 
Sbjct: 90255 tactgccacgggttgaattcgatcgaagtgacgtctgtatcgtcgtcggc---cacactt 90311

                                                                         
Query: 339   gagctgtctatcgcggcccggtgctcggtgtatctgccgttgtactcgtacacctccagg 398
             |||||||| || || || ||||||||||||||| | || ||||| || ||||| ||||| 
Sbjct: 90312 gagctgtcaatggcagcgcggtgctcggtgtattttccattgtattcatacacttccagc 90371

                                                                         
Query: 399   tcgccccacggggtaggggagatgtcttccgtcatcttgaaccattttggagtgaacttc 458
             |||||||| || ||||||| ||| || || ||| | || |||||| ||||||| || | |
Sbjct: 90372 tcgccccagggtgtaggggcgatttcatcggtcctgttaaaccatcttggagtaaattgc 90431

                       
Query: 459   tcccccttgg 468
             ||||||||||
Sbjct: 90432 tcccccttgg 90441



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                       
Query: 73    acagaatatggactacatcaaatacacaatcacatcctgaac 114
             |||| |||||||||||||| ||||||| ||||| ||||||||
Sbjct: 90044 acagtatatggactacatcgaatacaccatcacttcctgaac 90085



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 153   ataacactacaaaggcacgaaaac 176
             |||| |||||||||||||||||||
Sbjct: 90120 ataatactacaaaggcacgaaaac 90143
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 152/190 (80%), Gaps = 3/190 (1%)
 Strand = Plus / Minus

                                                                           
Query: 279     tactgccacgggttgaactcgatggagctgacgtccgtctcctcggcgacgaccacgcta 338
               ||||||||||||||||| ||||| ||  ||||||| || || ||| || |   ||| || 
Sbjct: 9193969 tactgccacgggttgaattcgatcgaagtgacgtctgtatcgtcgtcggc---cacactt 9193913

                                                                           
Query: 339     gagctgtctatcgcggcccggtgctcggtgtatctgccgttgtactcgtacacctccagg 398
               |||||||| || || || ||||||||||||||| | || ||||| || ||||| ||||| 
Sbjct: 9193912 gagctgtcaatggcagcgcggtgctcggtgtattttccattgtattcatacacttccagc 9193853

                                                                           
Query: 399     tcgccccacggggtaggggagatgtcttccgtcatcttgaaccattttggagtgaacttc 458
               |||||||| || ||||||| ||| || || ||| | || |||||| ||||||| || | |
Sbjct: 9193852 tcgccccagggtgtaggggcgatttcatcggtcctgttaaaccatcttggagtaaattgc 9193793

                         
Query: 459     tcccccttgg 468
               ||||||||||
Sbjct: 9193792 tcccccttgg 9193783



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                         
Query: 73      acagaatatggactacatcaaatacacaatcacatcctgaac 114
               |||| |||||||||||||| ||||||| ||||| ||||||||
Sbjct: 9194180 acagtatatggactacatcgaatacaccatcacttcctgaac 9194139



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 153     ataacactacaaaggcacgaaaac 176
               |||| |||||||||||||||||||
Sbjct: 9194104 ataatactacaaaggcacgaaaac 9194081
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>dbj|AK119251.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-122-D09, full
           insert sequence
          Length = 821

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 152/190 (80%), Gaps = 3/190 (1%)
 Strand = Plus / Minus

                                                                       
Query: 279 tactgccacgggttgaactcgatggagctgacgtccgtctcctcggcgacgaccacgcta 338
           ||||||||||||||||| ||||| ||  ||||||| || || ||| || |   ||| || 
Sbjct: 583 tactgccacgggttgaattcgatcgaagtgacgtctgtatcgtcgtcggc---cacactt 527

                                                                       
Query: 339 gagctgtctatcgcggcccggtgctcggtgtatctgccgttgtactcgtacacctccagg 398
           |||||||| || || || ||||||||||||||| | || ||||| || ||||| ||||| 
Sbjct: 526 gagctgtcaatggcagcgcggtgctcggtgtattttccattgtattcatacacttccagc 467

                                                                       
Query: 399 tcgccccacggggtaggggagatgtcttccgtcatcttgaaccattttggagtgaacttc 458
           |||||||| || ||||||| ||| || || ||| | || |||||| ||||||| || | |
Sbjct: 466 tcgccccagggtgtaggggcgatttcatcggtcctgttaaaccatcttggagtaaattgc 407

                     
Query: 459 tcccccttgg 468
           ||||||||||
Sbjct: 406 tcccccttgg 397



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                     
Query: 73  acagaatatggactacatcaaatacacaatcacatcctgaac 114
           |||| |||||||||||||| ||||||| ||||| ||||||||
Sbjct: 794 acagtatatggactacatcgaatacaccatcacttcctgaac 753



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 153 ataacactacaaaggcacgaaaac 176
           |||| |||||||||||||||||||
Sbjct: 718 ataatactacaaaggcacgaaaac 695
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>dbj|AK060769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-B01, full
            insert sequence
          Length = 1898

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 152/190 (80%), Gaps = 3/190 (1%)
 Strand = Plus / Minus

                                                                        
Query: 279  tactgccacgggttgaactcgatggagctgacgtccgtctcctcggcgacgaccacgcta 338
            ||||||||||||||||| ||||| ||  ||||||| || || ||| || |   ||| || 
Sbjct: 1660 tactgccacgggttgaattcgatcgaagtgacgtctgtatcgtcgtcggc---cacactt 1604

                                                                        
Query: 339  gagctgtctatcgcggcccggtgctcggtgtatctgccgttgtactcgtacacctccagg 398
            |||||||| || || || ||||||||||||||| | || ||||| || ||||| ||||| 
Sbjct: 1603 gagctgtcaatggcagcgcggtgctcggtgtattttccattgtattcatacacttccagc 1544

                                                                        
Query: 399  tcgccccacggggtaggggagatgtcttccgtcatcttgaaccattttggagtgaacttc 458
            |||||||| || ||||||| ||| || || ||| | || |||||| ||||||| || | |
Sbjct: 1543 tcgccccagggtgtaggggcgatttcatcggtcctgttaaaccatcttggagtaaattgc 1484

                      
Query: 459  tcccccttgg 468
            ||||||||||
Sbjct: 1483 tcccccttgg 1474



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                      
Query: 73   acagaatatggactacatcaaatacacaatcacatcctgaac 114
            |||| |||||||||||||| ||||||| ||||| ||||||||
Sbjct: 1871 acagtatatggactacatcgaatacaccatcacttcctgaac 1830



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 153  ataacactacaaaggcacgaaaac 176
            |||| |||||||||||||||||||
Sbjct: 1795 ataatactacaaaggcacgaaaac 1772
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>gb|AY103776.1| Zea mays PCO077793 mRNA sequence
          Length = 1843

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 70/82 (85%)
 Strand = Plus / Minus

                                                                        
Query: 339  gagctgtctatcgcggcccggtgctcggtgtatctgccgttgtactcgtacacctccagg 398
            |||| |||||| || ||||||||||| |||||| |||||||||| || || |  ||||||
Sbjct: 1493 gagcggtctatggcagcccggtgctctgtgtatttgccgttgtattcataaatttccagg 1434

                                  
Query: 399  tcgccccacggggtaggggaga 420
            || |||||||| ||||||||||
Sbjct: 1433 tcaccccacggtgtaggggaga 1412
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>gb|AC150555.1| Drosophila melanogaster clone BACR26G12, complete sequence
          Length = 164461

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 135   aaaagtggaaagtcatatata 155
             |||||||||||||||||||||
Sbjct: 28931 aaaagtggaaagtcatatata 28951
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>gb|AC100383.12| Mus musculus chromosome 6, clone RP23-132E3, complete sequence
          Length = 241050

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 1      taataatcttcctaatttcca 21
              |||||||||||||||||||||
Sbjct: 121583 taataatcttcctaatttcca 121603
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>emb|AL807373.1|NC21D9 Neurospora crassa DNA linkage group V cosmid contig 21D9
          Length = 55380

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 38    aatgaatttccaaacttcttt 58
             |||||||||||||||||||||
Sbjct: 27518 aatgaatttccaaacttcttt 27498
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>gb|AC007299.18|AC007299 Drosophila melanogaster, chromosome 2L, region 30B-, BAC clone BACR07D23,
              complete sequence
          Length = 176610

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 135    aaaagtggaaagtcatatata 155
              |||||||||||||||||||||
Sbjct: 147680 aaaagtggaaagtcatatata 147660
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>gb|AC084652.1|CBRG45O11 Caenorhabditis briggsae cosmid G45O11, complete sequence
          Length = 26703

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 478  ttttcttctcggctcgttgtt 498
            |||||||||||||||||||||
Sbjct: 9515 ttttcttctcggctcgttgtt 9535
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>gb|AC007257.9|AC007257 Drosophila melanogaster, chromosome 2L, region 30B-, BAC clone BACR24A22,
              complete sequence
          Length = 183007

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 135    aaaagtggaaagtcatatata 155
              |||||||||||||||||||||
Sbjct: 178824 aaaagtggaaagtcatatata 178844
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>gb|AE003625.3| Drosophila melanogaster chromosome 2L, section 34 of 83 of the complete
             sequence
          Length = 271507

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 135   aaaagtggaaagtcatatata 155
             |||||||||||||||||||||
Sbjct: 87881 aaaagtggaaagtcatatata 87861
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>ref|XM_478238.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 414

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 471 tcccggattttcttctcggc 490
           ||||||||||||||||||||
Sbjct: 287 tcccggattttcttctcggc 306
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>gb|AC149790.1| Pan troglodytes chromosome X clone PTB-089K20, complete sequence
          Length = 47909

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 42    aatttccaaacttctttcta 61
             ||||||||||||||||||||
Sbjct: 38586 aatttccaaacttctttcta 38567
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>ref|XM_452372.1| Kluyveromyces lactis NRRL Y-1140, KLLA0C03938g predicted mRNA
          Length = 1782

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 90  tcaaatacacaatcacatcc 109
           ||||||||||||||||||||
Sbjct: 421 tcaaatacacaatcacatcc 440
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>ref|XM_804221.1| Trypanosoma cruzi strain CL Brener protein kinase
           (Tc00.1047053507837.20) partial mRNA
          Length = 1434

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 391 cctccaggtcgccccacggg 410
           ||||||||||||||||||||
Sbjct: 364 cctccaggtcgccccacggg 345
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>ref|XM_804530.1| Trypanosoma cruzi strain CL Brener protein kinase
           (Tc00.1047053508405.70) partial mRNA
          Length = 1434

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 391 cctccaggtcgccccacggg 410
           ||||||||||||||||||||
Sbjct: 364 cctccaggtcgccccacggg 345
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>emb|AL583808.6| Human DNA sequence from clone RP11-262K1 on chromosome 1 Contains a novel
              gene, complete sequence
          Length = 174642

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 32     tcttaaaatgaatttccaaa 51
              ||||||||||||||||||||
Sbjct: 133704 tcttaaaatgaatttccaaa 133685
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>emb|AL390037.16| Human DNA sequence from clone RP5-851M4 on chromosome 20 Contains ESTs,
             STSs and GSSs, complete sequence
          Length = 79531

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 43    atttccaaacttctttctag 62
             ||||||||||||||||||||
Sbjct: 37700 atttccaaacttctttctag 37719
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>ref|XM_792977.1| PREDICTED: Strongylocentrotus purpuratus similar to Mitogen-activated
            protein kinase kinase kinase kinase 5 (MAPK/ERK kinase
            kinase kinase 5) (MEK kinase kinase 5) (MEKKK 5)
            (LOC593505), mRNA
          Length = 2643

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 240  cttcagaccctttgaaatcattgg 263
            |||||| |||||||||||||||||
Sbjct: 1240 cttcagcccctttgaaatcattgg 1217
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>gb|AC116546.1| Homo sapiens 3 BAC RP11-312H1 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 160421

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 27    attggtcttaaaatgaattt 46
             ||||||||||||||||||||
Sbjct: 80036 attggtcttaaaatgaattt 80017
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>emb|CR382123.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome C of strain NRRL
              Y-1140 of Kluyveromyces lactis
          Length = 1753957

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 90     tcaaatacacaatcacatcc 109
              ||||||||||||||||||||
Sbjct: 360212 tcaaatacacaatcacatcc 360193
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>emb|BX640408.8| Zebrafish DNA sequence from clone CH211-262L3 in linkage group 2,
             complete sequence
          Length = 123471

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 32    tcttaaaatgaatttccaaa 51
             ||||||||||||||||||||
Sbjct: 48088 tcttaaaatgaatttccaaa 48107
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>gb|AC013526.7| Homo sapiens, clone RP11-114I24, complete sequence
          Length = 156895

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 20    cactgaaattggtcttaaaa 39
             ||||||||||||||||||||
Sbjct: 27611 cactgaaattggtcttaaaa 27592
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>gb|AC023344.4|AC023344 Homo sapiens BAC clone RP11-395G23 from 8, complete sequence
          Length = 186751

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 42     aatttccaaacttctttcta 61
              ||||||||||||||||||||
Sbjct: 175148 aatttccaaacttctttcta 175129
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 471      tcccggattttcttctcggc 490
                ||||||||||||||||||||
Sbjct: 18757364 tcccggattttcttctcggc 18757383
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>gb|AC022692.11| Homo sapiens chromosome 15, clone RP11-530L17, complete sequence
          Length = 173604

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 20    cactgaaattggtcttaaaa 39
             ||||||||||||||||||||
Sbjct: 94008 cactgaaattggtcttaaaa 94027
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>dbj|AP005177.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBb0055I24
          Length = 155872

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 471   tcccggattttcttctcggc 490
             ||||||||||||||||||||
Sbjct: 89652 tcccggattttcttctcggc 89671
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>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica
          Length = 3633272

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 35     taaaatgaatttccaaactt 54
              ||||||||||||||||||||
Sbjct: 160193 taaaatgaatttccaaactt 160212
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>emb|AL807248.7| Mouse DNA sequence from clone RP23-400M20 on chromosome X, complete
              sequence
          Length = 190178

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 244    agaccctttgaaatcattgg 263
              ||||||||||||||||||||
Sbjct: 102734 agaccctttgaaatcattgg 102753
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>gb|AC012435.13| Homo sapiens chromosome 15, clone RP11-10O17, complete sequence
          Length = 132994

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 83    gactacatcaaatacacaat 102
             ||||||||||||||||||||
Sbjct: 46341 gactacatcaaatacacaat 46360
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>dbj|AP003353.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1491A8
          Length = 159490

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 42    aatttccaaacttctttcta 61
             ||||||||||||||||||||
Sbjct: 51883 aatttccaaacttctttcta 51864


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,102,092
Number of Sequences: 3902068
Number of extensions: 4102092
Number of successful extensions: 79768
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 79574
Number of HSP's gapped (non-prelim): 190
length of query: 498
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 476
effective length of database: 17,147,199,772
effective search space: 8162067091472
effective search space used: 8162067091472
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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