ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags29k13 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK119801.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-A08, full insert sequence Length = 537 Score = 373 bits (188), Expect = e-100 Identities = 266/292 (91%) Strand = Plus / Minus Query: 184 gtagtgcgatcaagcttcggtctgctccctcaaacggcggatggtgctcctgacggtgac 243 ||||||| |||| ||||| ||||||||||||| ||| ||||| ||||||||||| ||||| Sbjct: 365 gtagtgcaatcaggcttcagtctgctccctcagacgacggattgtgctcctgacagtgac 306 Query: 244 cgcactagccgtgttcatggtataggcaccaccagccttgaccttcccacagtccttgca 303 ||||||||| ||||||||||| || |||||||| ||||| |||||||||||||||||||| Sbjct: 305 cgcactagcagtgttcatggtgtaagcaccaccggccttcaccttcccacagtccttgca 246 Query: 304 tccccaaattccaacagctttcctcttcacagcaaacttcccgcagaattcacagaagta 363 |||||| |||||||| |||||||||||||| ||||||||||| ||||| ||||||||||| Sbjct: 245 tccccagattccaactgctttcctcttcacggcaaacttcccacagaactcacagaagta 186 Query: 364 cttggagtgctgagacacctccatcttcttgatctgcttacgcagactggcaccatacct 423 ||||||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||| Sbjct: 185 cttggagtgctgagaaacctccatcttcttgatttgcttacgcaaactggcaccatacct 126 Query: 424 ggttccatacttcccgacgattccagccttcttggtgcgcttcgtcatctcg 475 || ||||| || || || ||||||||||||||||||||||||||||||||| Sbjct: 125 agtaccatatttgccaacaattccagccttcttggtgcgcttcgtcatctcg 74
>dbj|AK119702.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-157-D09, full insert sequence Length = 564 Score = 365 bits (184), Expect = 1e-97 Identities = 265/292 (90%) Strand = Plus / Minus Query: 184 gtagtgcgatcaagcttcggtctgctccctcaaacggcggatggtgctcctgacggtgac 243 ||||||| |||| ||||| ||||||||||||| ||| ||||| ||||||||||| ||||| Sbjct: 365 gtagtgcaatcaggcttcagtctgctccctcagacgacggattgtgctcctgacagtgac 306 Query: 244 cgcactagccgtgttcatggtataggcaccaccagccttgaccttcccacagtccttgca 303 ||||||||| ||||||||||| || |||||||| ||||| |||||||||||||||||||| Sbjct: 305 cgcactagcagtgttcatggtgtaagcaccaccggccttcaccttcccacagtccttgca 246 Query: 304 tccccaaattccaacagctttcctcttcacagcaaacttcccgcagaattcacagaagta 363 |||||| |||||||| |||||||||||||| ||||||||||| ||||| ||||||||||| Sbjct: 245 tccccagattccaactgctttcctcttcacggcaaacttcccacagaactcacagaagta 186 Query: 364 cttggagtgctgagacacctccatcttcttgatctgcttacgcagactggcaccatacct 423 ||||||||||||||| ||||||||||||||||| |||||||||| |||||||||||||| Sbjct: 185 cttggagtgctgagaaacctccatcttcttgatttgcttacgcaaactggcaccataccc 126 Query: 424 ggttccatacttcccgacgattccagccttcttggtgcgcttcgtcatctcg 475 || ||||| || || || ||||||||||||||||||||||||||||||||| Sbjct: 125 agtaccatatttgccaacaattccagccttcttggtgcgcttcgtcatctcg 74
>gb|AY109323.1| Zea mays CL4004_3 mRNA sequence Length = 1730 Score = 363 bits (183), Expect = 4e-97 Identities = 261/287 (90%) Strand = Plus / Minus Query: 190 cgatcaagcttcggtctgctccctcaaacggcggatggtgctcctgacggtgaccgcact 249 |||||| ||||| |||||||||||||| || ||||| ||||||||||| ||||||||||| Sbjct: 1539 cgatcatgcttcagtctgctccctcaagcgacggatcgtgctcctgacagtgaccgcact 1480 Query: 250 agccgtgttcatggtataggcaccaccagccttgaccttcccacagtccttgcatcccca 309 ||| ||||||||||| || |||||||| |||||||||||||||||||||||||||||||| Sbjct: 1479 agcagtgttcatggtgtaagcaccaccggccttgaccttcccacagtccttgcatcccca 1420 Query: 310 aattccaacagctttcctcttcacagcaaacttcccgcagaattcacagaagtacttgga 369 ||| ||||| |||||||||||||||||||||||||| ||||| |||||||| |||||||| Sbjct: 1419 aatcccaaccgctttcctcttcacagcaaacttcccacagaactcacagaaatacttgga 1360 Query: 370 gtgctgagacacctccatcttcttgatctgcttacgcagactggcaccatacctggttcc 429 ||||||||| ||||||||||||||||| |||||||||| || ||||||||||||||||| Sbjct: 1359 gtgctgagatacctccatcttcttgatttgcttacgcaagctagcaccatacctggttcc 1300 Query: 430 atacttcccgacgattccagccttcttggtgcgcttcgtcatctcgg 476 ||| || || || ||||| ||||||||||| |||||||||||||||| Sbjct: 1299 atatttgccaacaattccggccttcttggttcgcttcgtcatctcgg 1253
>dbj|AK059395.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-A05, full insert sequence Length = 547 Score = 355 bits (179), Expect = 9e-95 Identities = 257/283 (90%) Strand = Plus / Minus Query: 191 gatcaagcttcggtctgctccctcaaacggcggatggtgctcctgacggtgaccgcacta 250 ||||| ||||| ||||||||||||| || ||||| ||||| ||||| ||||||||||| Sbjct: 362 gatcaggcttctgtctgctccctcaggcgacggattgtgcttctgaccgtgaccgcactg 303 Query: 251 gccgtgttcatggtataggcaccaccagccttgaccttcccacagtccttgcatccccaa 310 || ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 302 gcagtgttcatggtgtaggcaccaccagccttgaccttgccacagtccttgcatccccag 243 Query: 311 attccaacagctttcctcttcacagcaaacttcccgcagaattcacagaagtacttggag 370 |||||||| ||||||||||||||||||||||| || ||||| || ||||||||||||||| Sbjct: 242 attccaactgctttcctcttcacagcaaacttgccacagaactcgcagaagtacttggag 183 Query: 371 tgctgagacacctccatcttcttgatctgcttacgcagactggcaccatacctggttcca 430 ||||| || |||||||||||||||||||||||||||| |||||||||||||||||| ||| Sbjct: 182 tgctgggaaacctccatcttcttgatctgcttacgcaaactggcaccatacctggtacca 123 Query: 431 tacttcccgacgattccagccttcttggtgcgcttcgtcatct 473 || || || |||||||| ||||||||||||||||||||||||| Sbjct: 122 tatttgccaacgattcctgccttcttggtgcgcttcgtcatct 80
>ref|NM_192041.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 369 Score = 349 bits (176), Expect = 6e-93 Identities = 248/272 (91%) Strand = Plus / Minus Query: 197 gcttcggtctgctccctcaaacggcggatggtgctcctgacggtgaccgcactagccgtg 256 ||||| ||||||||||||| ||| ||||| ||||||||||| |||||||||||||| ||| Sbjct: 365 gcttcagtctgctccctcagacgacggattgtgctcctgacagtgaccgcactagcagtg 306 Query: 257 ttcatggtataggcaccaccagccttgaccttcccacagtccttgcatccccaaattcca 316 |||||||| || |||||||| ||||| |||||||||||||||||||||||||| |||||| Sbjct: 305 ttcatggtgtaagcaccaccggccttcaccttcccacagtccttgcatccccagattcca 246 Query: 317 acagctttcctcttcacagcaaacttcccgcagaattcacagaagtacttggagtgctga 376 || |||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||| Sbjct: 245 actgctttcctcttcacggcaaacttcccacagaactcacagaagtacttggagtgctga 186 Query: 377 gacacctccatcttcttgatctgcttacgcagactggcaccatacctggttccatacttc 436 || ||||||||||||||||| |||||||||| ||||||||||||||| || ||||| || Sbjct: 185 gaaacctccatcttcttgatttgcttacgcaaactggcaccatacctagtaccatatttg 126 Query: 437 ccgacgattccagccttcttggtgcgcttcgt 468 || || |||||||||||||||||||||||||| Sbjct: 125 ccaacaattccagccttcttggtgcgcttcgt 94
>ref|XM_475898.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 288 Score = 343 bits (173), Expect = 4e-91 Identities = 248/273 (90%) Strand = Plus / Minus Query: 197 gcttcggtctgctccctcaaacggcggatggtgctcctgacggtgaccgcactagccgtg 256 ||||| ||||||||||||| || ||||| ||||| ||||| ||||||||||| || ||| Sbjct: 284 gcttctgtctgctccctcaggcgacggattgtgcttctgaccgtgaccgcactggcagtg 225 Query: 257 ttcatggtataggcaccaccagccttgaccttcccacagtccttgcatccccaaattcca 316 |||||||| ||||||||||||||||||||||| |||||||||||||||||||| |||||| Sbjct: 224 ttcatggtgtaggcaccaccagccttgaccttgccacagtccttgcatccccagattcca 165 Query: 317 acagctttcctcttcacagcaaacttcccgcagaattcacagaagtacttggagtgctga 376 || ||||||||||||||||||||||| || ||||| || |||||||||||||||||||| Sbjct: 164 actgctttcctcttcacagcaaacttgccacagaactcgcagaagtacttggagtgctgg 105 Query: 377 gacacctccatcttcttgatctgcttacgcagactggcaccatacctggttccatacttc 436 || |||||||||||||||||||||||||||| |||||||||||||||||| ||||| || Sbjct: 104 gaaacctccatcttcttgatctgcttacgcaaactggcaccatacctggtaccatatttg 45 Query: 437 ccgacgattccagccttcttggtgcgcttcgtc 469 || |||||||| ||||||||||||||||||||| Sbjct: 44 ccaacgattcctgccttcttggtgcgcttcgtc 12
>gb|AY103695.1| Zea mays PCO065803 mRNA sequence Length = 774 Score = 339 bits (171), Expect = 6e-90 Identities = 258/287 (89%) Strand = Plus / Minus Query: 192 atcaagcttcggtctgctccctcaaacggcggatggtgctcctgacggtgaccgcactag 251 |||| ||||| |||||||| ||||| || || || ||||||||||| ||||| ||||||| Sbjct: 384 atcatgcttcagtctgctctctcaagcgacgaatcgtgctcctgacagtgactgcactag 325 Query: 252 ccgtgttcatggtataggcaccaccagccttgaccttcccacagtccttgcatccccaaa 311 | ||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 324 cagtgttcatggtgtaagcaccgccagccttgaccttcccacagtccttgcatccccaaa 265 Query: 312 ttccaacagctttcctcttcacagcaaacttcccgcagaattcacagaagtacttggagt 371 ||||||| |||||||||||||||||||||||||| || || || |||||||||||||||| Sbjct: 264 ttccaactgctttcctcttcacagcaaacttcccacaaaactcgcagaagtacttggagt 205 Query: 372 gctgagacacctccatcttcttgatctgcttacgcagactggcaccatacctggttccat 431 ||||||| ||||||||||||||||| |||||||||| || || |||||||||||||||| Sbjct: 204 gctgagatacctccatcttcttgatttgcttacgcaagctagcgccatacctggttccat 145 Query: 432 acttcccgacgattccagccttcttggtgcgcttcgtcatctcggcg 478 | || || || ||||||||||||||||||||||||||||| |||||| Sbjct: 144 atttgccaacaattccagccttcttggtgcgcttcgtcatttcggcg 98
>gb|AY111949.1| Zea mays CL4004_2 mRNA sequence Length = 536 Score = 293 bits (148), Expect = 3e-76 Identities = 250/284 (88%) Strand = Plus / Minus Query: 192 atcaagcttcggtctgctccctcaaacggcggatggtgctcctgacggtgaccgcactag 251 |||| |||||||||||||||| || || ||||| ||||| || || ||||||||||||| Sbjct: 353 atcatgcttcggtctgctcccgcaggcgccggattgtgcttctcacagtgaccgcactag 294 Query: 252 ccgtgttcatggtataggcaccaccagccttgaccttcccacagtccttgcatccccaaa 311 | |||||||| || ||||| ||||| ||||| |||||||||||||||||||||||||| | Sbjct: 293 cagtgttcattgtgtaggcgccaccggccttaaccttcccacagtccttgcatccccaga 234 Query: 312 ttccaacagctttcctcttcacagcaaacttcccgcagaattcacagaagtacttggagt 371 | ||||| |||||||||||||| |||||||| || ||||| ||||||||||| ||||||| Sbjct: 233 taccaactgctttcctcttcacggcaaacttgccacagaactcacagaagtatttggagt 174 Query: 372 gctgagacacctccatcttcttgatctgcttacgcagactggcaccatacctggttccat 431 |||| || |||||||||||||||||||| ||||| | |||||||||||||||||| |||| Sbjct: 173 gctgcgagacctccatcttcttgatctgtttacgtaaactggcaccatacctggtaccat 114 Query: 432 acttcccgacgattccagccttcttggtgcgcttcgtcatctcg 475 | || || |||||||| |||||||||||||| |||||||||||| Sbjct: 113 atttgccaacgattcctgccttcttggtgcgtttcgtcatctcg 70
>dbj|D29723.1|RICYK36 Oryza sativa mRNA, partial homologous to ribosomal protein L37a gene Length = 283 Score = 285 bits (144), Expect = 7e-74 Identities = 202/220 (91%), Gaps = 1/220 (0%) Strand = Plus / Minus Query: 254 gtgttcatggtataggcaccaccagccttgaccttcccacagtccttgcatccccaaatt 313 ||||||||| | ||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 281 gtgttcatgttgtaggcaccaccagccttgaccttgccacagtccttgcatccccagatt 222 Query: 314 ccaacagctttcctcttcacagcaaacttcccgcagaattcacagaagtacttggagtgc 373 ||||| ||||||||||||||||||||||| || ||||| || |||||||||||||||||| Sbjct: 221 ccaactgctttcctcttcacagcaaacttgccacagaactcgcagaagtacttggagtgc 162 Query: 374 tgagacacctccatcttcttgatctgcttacgcagactggcaccatacctggttccatac 433 || || ||||||||||||||||||| |||||||| |||||||||||||||||| ||||| Sbjct: 161 tgggaaacctccatcttcttgatct-cttacgcaaactggcaccatacctggtaccatat 103 Query: 434 ttcccgacgattccagccttcttggtgcgcttcgtcatct 473 || || |||||||| ||||||||||||||||||||||||| Sbjct: 102 ttgccaacgattcctgccttcttggtgcgcttcgtcatct 63
>gb|DQ083180.1| Oryza sativa (indica cultivar-group) clone 2S8C47 mRNA sequence Length = 308 Score = 228 bits (115), Expect = 1e-56 Identities = 163/179 (91%) Strand = Plus / Minus Query: 184 gtagtgcgatcaagcttcggtctgctccctcaaacggcggatggtgctcctgacggtgac 243 ||||||| |||| ||||| ||||||||||||| ||| ||||| ||||||||||||||||| Sbjct: 179 gtagtgcaatcaggcttcagtctgctccctcagacgacggattgtgctcctgacggtgac 120 Query: 244 cgcactagccgtgttcatggtataggcaccaccagccttgaccttcccacagtccttgca 303 ||||||||| ||||||||||| || |||||||| ||||| |||||||||||||||||||| Sbjct: 119 cgcactagcagtgttcatggtgtaagcaccaccggccttcaccttcccacagtccttgca 60 Query: 304 tccccaaattccaacagctttcctcttcacagcaaacttcccgcagaattcacagaagt 362 |||||| |||||||| |||||||||||||| ||||||||||| ||||| |||||||||| Sbjct: 59 tccccagattccaactgctttcctcttcacggcaaacttcccacagaactcacagaagt 1
>dbj|AK059643.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-B10, full insert sequence Length = 370 Score = 206 bits (104), Expect = 5e-50 Identities = 152/168 (90%) Strand = Plus / Minus Query: 184 gtagtgcgatcaagcttcggtctgctccctcaaacggcggatggtgctcctgacggtgac 243 ||||||| |||| ||||| ||||||||||||| ||| ||||| ||||||||||| ||||| Sbjct: 171 gtagtgcaatcaggcttcagtctgctccctcagacgacggattgtgctcctgacagtgac 112 Query: 244 cgcactagccgtgttcatggtataggcaccaccagccttgaccttcccacagtccttgca 303 ||||||||| ||||||||||| || |||||||| ||||| |||||||||||||||||||| Sbjct: 111 cgcactagcagtgttcatggtgtaagcaccaccggccttcaccttcccacagtccttgca 52 Query: 304 tccccaaattccaacagctttcctcttcacagcaaacttcccgcagaa 351 |||||| |||||||| |||||||||||||| ||||||||||| ||||| Sbjct: 51 tccccagattccaactgctttcctcttcacggcaaacttcccacagaa 4
>gb|AY491666.1| Capsicum annuum unknown mRNA Length = 504 Score = 159 bits (80), Expect = 1e-35 Identities = 209/252 (82%) Strand = Plus / Minus Query: 221 cggatggtgctcctgacggtgaccgcactagccgtgttcatggtataggcaccaccagcc 280 |||||||| ||||| || || || ||||| || ||||||| || || |||||||| || Sbjct: 277 cggatggtactcctaactgtaacagcacttgcagtgttcaatgtgtaagcaccaccggct 218 Query: 281 ttgaccttcccacagtccttgcatccccaaattccaacagctttcctcttcacagcaaac 340 |||||||| ||||| || ||||| ||||||||||| |||||||||||||| || ||| || Sbjct: 217 ttgaccttgccacaatctttgcaaccccaaattcctacagctttcctctttactgcatac 158 Query: 341 ttcccgcagaattcacagaagtacttggagtgctgagacacctccatcttcttgatctgc 400 || || || || || |||||||||||| ||||| |||||||| || || |||||| Sbjct: 157 tttccacaaaactcgcagaagtacttgctatgctggctgacctccatttttttaatctgc 98 Query: 401 ttacgcagactggcaccatacctggttccatacttcccgacgattccagccttcttggtg 460 |||||||||||||||||||| | ||| ||||||||||| |||||||||||||||||||| Sbjct: 97 ttacgcagactggcaccataacgggtaccatacttcccaacgattccagccttcttggtc 38 Query: 461 cgcttcgtcatc 472 | ||| |||||| Sbjct: 37 ctcttagtcatc 26
>emb|AJ879068.1| Capsicum chinense mRNA for 60S ribosomal protein L37a Length = 536 Score = 151 bits (76), Expect = 3e-33 Identities = 208/252 (82%) Strand = Plus / Minus Query: 221 cggatggtgctcctgacggtgaccgcactagccgtgttcatggtataggcaccaccagcc 280 |||||||| ||||| || || || ||||| || ||||||| || || |||||||| || Sbjct: 305 cggatggtactcctaactgtaacagcacttgcagtgttcaatgtgtaagcaccaccggct 246 Query: 281 ttgaccttcccacagtccttgcatccccaaattccaacagctttcctcttcacagcaaac 340 |||||||| ||||| || ||||| ||||||||||| |||||||||||||| || ||| || Sbjct: 245 ttgaccttgccacaatctttgcaaccccaaattcctacagctttcctctttactgcatac 186 Query: 341 ttcccgcagaattcacagaagtacttggagtgctgagacacctccatcttcttgatctgc 400 || || || || || |||||||||| | ||||| |||||||| || || |||||| Sbjct: 185 tttccacaaaactcgcagaagtactcgctatgctggctgacctccatttttttaatctgc 126 Query: 401 ttacgcagactggcaccatacctggttccatacttcccgacgattccagccttcttggtg 460 |||||||||||||||||||| | ||| ||||||||||| |||||||||||||||||||| Sbjct: 125 ttacgcagactggcaccataacgggtaccatacttcccaacgattccagccttcttggtc 66 Query: 461 cgcttcgtcatc 472 | ||| |||||| Sbjct: 65 ctcttagtcatc 54
>emb|Z24739.1|BRRBPL37A B.rapa ribosomal protein L37a mRNA, complete CDS Length = 461 Score = 151 bits (76), Expect = 3e-33 Identities = 187/224 (83%) Strand = Plus / Minus Query: 233 ctgacggtgaccgcactagccgtgttcatggtataggcaccaccagccttgaccttccca 292 ||||||||||| ||||| || ||||||||||| || |||||||||||||||||||| ||| Sbjct: 272 ctgacggtgacggcactggcggtgttcatggtgtatgcaccaccagccttgaccttgcca 213 Query: 293 cagtccttgcatccccaaattccaacagctttcctcttcacagcaaacttcccgcagaat 352 || |||||||||||||| || ||||| || || |||||||| | |||| |||||||| Sbjct: 212 caatccttgcatccccagataccaactgcctttctcttcactccgtacttgccgcagaac 153 Query: 353 tcacagaagtacttggagtgctgagacacctccatcttcttgatctgcttacgcagactg 412 ||||||||||||||| |||||| |||||||||||||| |||||||| | | ||| Sbjct: 152 tcacagaagtacttgctgtgctggctgacctccatcttcttaatctgcttcctgatactc 93 Query: 413 gcaccatacctggttccatacttcccgacgattccagccttctt 456 || ||||| | ||||| ||||| |||||||||||| ||||||| Sbjct: 92 gctccatatcgagttccgtacttgccgacgattccaaccttctt 49
>gb|L21897.1|BRRRPL37A Brassica rapa ribosomal protein L37A (RPL37A) mRNA, complete cds Length = 446 Score = 151 bits (76), Expect = 3e-33 Identities = 187/224 (83%) Strand = Plus / Minus Query: 233 ctgacggtgaccgcactagccgtgttcatggtataggcaccaccagccttgaccttccca 292 ||||||||||| ||||| || ||||||||||| || |||||||||||||||||||| ||| Sbjct: 272 ctgacggtgacggcactggcggtgttcatggtgtatgcaccaccagccttgaccttgcca 213 Query: 293 cagtccttgcatccccaaattccaacagctttcctcttcacagcaaacttcccgcagaat 352 || |||||||||||||| || ||||| || || |||||||| | |||| |||||||| Sbjct: 212 caatccttgcatccccagataccaactgcctttctcttcactccgtacttgccgcagaac 153 Query: 353 tcacagaagtacttggagtgctgagacacctccatcttcttgatctgcttacgcagactg 412 ||||||||||||||| |||||| |||||||||||||| |||||||| | | ||| Sbjct: 152 tcacagaagtacttgctgtgctggctgacctccatcttcttaatctgcttcctgatactc 93 Query: 413 gcaccatacctggttccatacttcccgacgattccagccttctt 456 || ||||| | ||||| ||||| |||||||||||| ||||||| Sbjct: 92 gctccatatcgagttccgtacttgccgacgattccaaccttctt 49
>emb|AJ131732.1|PME131732 Pseudotsuga menziesii mRNA for ribosomal protein L37A Length = 607 Score = 145 bits (73), Expect = 2e-31 Identities = 175/209 (83%) Strand = Plus / Minus Query: 263 gtataggcaccaccagccttgaccttcccacagtccttgcatccccaaattccaacagct 322 |||||||||||||| ||||| ||||||||||| ||||||||||||||||| ||||| ||| Sbjct: 375 gtataggcaccacctgccttcaccttcccacaatccttgcatccccaaatcccaactgct 316 Query: 323 ttcctcttcacagcaaacttcccgcagaattcacagaagtacttggagtgctgagacacc 382 || || ||||| |||||||| || ||||||||||| || ||||||| |||||| ||| Sbjct: 315 tttcttttcactgcaaacttgccacagaattcacaaaaaaacttggaatgctgactcact 256 Query: 383 tccatcttcttgatctgcttacgcagactggcaccatacctggttccatacttcccgacg 442 ||||| || || ||||| || | | |||||||||||||||||| ||||| || || || Sbjct: 255 tccatttttttaatctgttttcttaaactggcaccatacctggtaccatatttgccaaca 196 Query: 443 attccagccttcttggtgcgcttcgtcat 471 || ||||||||||| || ||||| ||||| Sbjct: 195 ataccagccttcttagtacgctttgtcat 167
>gb|AC104709.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1214_E03, complete sequence Length = 144601 Score = 137 bits (69), Expect = 4e-29 Identities = 81/85 (95%) Strand = Plus / Minus Query: 257 ttcatggtataggcaccaccagccttgaccttcccacagtccttgcatccccaaattcca 316 |||||||| ||||||||||||||||||||||| |||||||||||||||||||| |||||| Sbjct: 77277 ttcatggtgtaggcaccaccagccttgaccttgccacagtccttgcatccccagattcca 77218 Query: 317 acagctttcctcttcacagcaaact 341 || |||||||||||||||||||||| Sbjct: 77217 actgctttcctcttcacagcaaact 77193 Score = 119 bits (60), Expect = 1e-23 Identities = 75/80 (93%) Strand = Plus / Minus Query: 347 cagaattcacagaagtacttggagtgctgagacacctccatcttcttgatctgcttacgc 406 ||||| || |||||||||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 76688 cagaactcgcagaagtacttggagtgctgggaaacctccatcttcttgatctgcttacgc 76629 Query: 407 agactggcaccatacctggt 426 | |||||||||||||||||| Sbjct: 76628 aaactggcaccatacctggt 76609 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 191 gatcaagcttcggtctgctccctcaaacggcggatggtgctcctgacggtgaccgcact 249 ||||| ||||| ||||||||||||| || ||||| ||||| ||||| ||||||||||| Sbjct: 77414 gatcaggcttctgtctgctccctcaggcgacggattgtgcttctgaccgtgaccgcact 77356 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 440 acgattccagccttcttggtgcgcttcgtc 469 |||||||| ||||||||||||||||||||| Sbjct: 76497 acgattcctgccttcttggtgcgcttcgtc 76468
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 137 bits (69), Expect = 4e-29 Identities = 81/85 (95%) Strand = Plus / Minus Query: 257 ttcatggtataggcaccaccagccttgaccttcccacagtccttgcatccccaaattcca 316 |||||||| ||||||||||||||||||||||| |||||||||||||||||||| |||||| Sbjct: 27481147 ttcatggtgtaggcaccaccagccttgaccttgccacagtccttgcatccccagattcca 27481088 Query: 317 acagctttcctcttcacagcaaact 341 || |||||||||||||||||||||| Sbjct: 27481087 actgctttcctcttcacagcaaact 27481063 Score = 119 bits (60), Expect = 1e-23 Identities = 75/80 (93%) Strand = Plus / Minus Query: 347 cagaattcacagaagtacttggagtgctgagacacctccatcttcttgatctgcttacgc 406 ||||| || |||||||||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 27480558 cagaactcgcagaagtacttggagtgctgggaaacctccatcttcttgatctgcttacgc 27480499 Query: 407 agactggcaccatacctggt 426 | |||||||||||||||||| Sbjct: 27480498 aaactggcaccatacctggt 27480479 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 191 gatcaagcttcggtctgctccctcaaacggcggatggtgctcctgacggtgaccgcact 249 ||||| ||||| ||||||||||||| || ||||| ||||| ||||| ||||||||||| Sbjct: 27481284 gatcaggcttctgtctgctccctcaggcgacggattgtgcttctgaccgtgaccgcact 27481226 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 440 acgattccagccttcttggtgcgcttcgtc 469 |||||||| ||||||||||||||||||||| Sbjct: 27480367 acgattcctgccttcttggtgcgcttcgtc 27480338
>gb|AC004667.3| Arabidopsis thaliana chromosome 2 clone T4C15 map ve016, complete sequence Length = 91863 Score = 135 bits (68), Expect = 2e-28 Identities = 170/204 (83%) Strand = Plus / Minus Query: 223 gatggtgctcctgacggtgaccgcactagccgtgttcatggtataggcaccaccagcctt 282 |||||| ||||| || || || |||||||| || ||||| || |||||||| |||||||| Sbjct: 39659 gatggtactcctaacagttacagcactagcagtattcatcgtgtaggcacctccagcctt 39600 Query: 283 gaccttcccacagtccttgcatccccaaattccaacagctttcctcttcacagcaaactt 342 || |||||||||||||| |||||||||||||||||||| |||| || |||||| |||| Sbjct: 39599 aactttcccacagtccttacatccccaaattccaacagccttccgtttaacagcatactt 39540 Query: 343 cccgcagaattcacagaagtacttggagtgctgagacacctccatcttcttgatctgctt 402 || ||||| | |||||||| ||| ||||||| ||| |||||||||||||| ||||| Sbjct: 39539 gccacagaactagcagaagtatttgctgtgctgactcacttccatcttcttgatttgctt 39480 Query: 403 acgcagactggcaccatacctggt 426 | |||||||||||||| ||||| Sbjct: 39479 cctaagactggcaccatatctggt 39456
>ref|NM_111932.1| Arabidopsis thaliana structural constituent of ribosome AT3G10950 mRNA, complete cds Length = 279 Score = 129 bits (65), Expect = 1e-26 Identities = 209/257 (81%) Strand = Plus / Minus Query: 200 tcggtctgctccctcaaacggcggatggtgctcctgacggtgaccgcactagccgtgttc 259 ||||| ||||| ||||| || | |||||| ||||| || || || ||||||||||||||| Sbjct: 272 tcggtttgctctctcaaccgcctgatggtactcctaacagtcacagcactagccgtgttc 213 Query: 260 atggtataggcaccaccagccttgaccttcccacagtccttgcatccccaaattccaaca 319 || || || ||||| || || || || ||||| || || ||||| |||||||| |||||| Sbjct: 212 attgtgtatgcaccgcctgctttcactttcccgcaatctttgcacccccaaatgccaaca 153 Query: 320 gctttcctcttcacagcaaacttcccgcagaattcacagaagtacttggagtgctgagac 379 |||||||||| || | |||| |||||||| ||||||||||||||| ||| ||| | Sbjct: 152 actttcctcttaacggagtactttccgcagaactcacagaagtacttgttgtgttgactc 93 Query: 380 acctccatcttcttgatctgcttacgcagactggcaccatacctggttccatacttcccg 439 || |||||||||||||||||||| | |||||||||||||| | || ||||| || ||| Sbjct: 92 acttccatcttcttgatctgcttcctaagactggcaccatatcgtgtaccatattttccg 33 Query: 440 acgattccagccttctt 456 || |||| ||||||||| Sbjct: 32 acaattctagccttctt 16
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 127 bits (64), Expect = 4e-26 Identities = 79/84 (94%) Strand = Plus / Plus Query: 340 cttcccgcagaattcacagaagtacttggagtgctgagacacctccatcttcttgatctg 399 |||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 27960220 cttcccacagaactcacagaagtacttggagtgctgagaaacctccatcttcttgatttg 27960279 Query: 400 cttacgcagactggcaccatacct 423 |||||||| ||||||||||||||| Sbjct: 27960280 cttacgcaaactggcaccatacct 27960303 Score = 113 bits (57), Expect = 6e-22 Identities = 78/85 (91%) Strand = Plus / Plus Query: 257 ttcatggtataggcaccaccagccttgaccttcccacagtccttgcatccccaaattcca 316 |||||||| || |||||||| ||||| |||||||||||||||||||||||||| |||||| Sbjct: 27959342 ttcatggtgtaagcaccaccggccttcaccttcccacagtccttgcatccccagattcca 27959401 Query: 317 acagctttcctcttcacagcaaact 341 || |||||||||||||| ||||||| Sbjct: 27959402 actgctttcctcttcacggcaaact 27959426 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 184 gtagtgcgatcaagcttcggtctgctccctcaaacggcggatggtgctcctgacggtgac 243 ||||||| |||| ||||| ||||||||||||| ||| ||||| ||||||||||| ||||| Sbjct: 27959179 gtagtgcaatcaggcttcagtctgctccctcagacgacggattgtgctcctgacagtgac 27959238 Query: 244 cgcactagc 252 ||||||||| Sbjct: 27959239 cgcactagc 27959247 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 443 attccagccttcttggtgcgcttcgtc 469 ||||||||||||||||||||||||||| Sbjct: 27960402 attccagccttcttggtgcgcttcgtc 27960428
>dbj|AP003335.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1144G04 Length = 194459 Score = 127 bits (64), Expect = 4e-26 Identities = 79/84 (94%) Strand = Plus / Plus Query: 340 cttcccgcagaattcacagaagtacttggagtgctgagacacctccatcttcttgatctg 399 |||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 146901 cttcccacagaactcacagaagtacttggagtgctgagaaacctccatcttcttgatttg 146960 Query: 400 cttacgcagactggcaccatacct 423 |||||||| ||||||||||||||| Sbjct: 146961 cttacgcaaactggcaccatacct 146984 Score = 113 bits (57), Expect = 6e-22 Identities = 78/85 (91%) Strand = Plus / Plus Query: 257 ttcatggtataggcaccaccagccttgaccttcccacagtccttgcatccccaaattcca 316 |||||||| || |||||||| ||||| |||||||||||||||||||||||||| |||||| Sbjct: 146023 ttcatggtgtaagcaccaccggccttcaccttcccacagtccttgcatccccagattcca 146082 Query: 317 acagctttcctcttcacagcaaact 341 || |||||||||||||| ||||||| Sbjct: 146083 actgctttcctcttcacggcaaact 146107 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 184 gtagtgcgatcaagcttcggtctgctccctcaaacggcggatggtgctcctgacggtgac 243 ||||||| |||| ||||| ||||||||||||| ||| ||||| ||||||||||| ||||| Sbjct: 145860 gtagtgcaatcaggcttcagtctgctccctcagacgacggattgtgctcctgacagtgac 145919 Query: 244 cgcactagc 252 ||||||||| Sbjct: 145920 cgcactagc 145928 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 443 attccagccttcttggtgcgcttcgtc 469 ||||||||||||||||||||||||||| Sbjct: 147083 attccagccttcttggtgcgcttcgtc 147109
>ref|NM_115888.2| Arabidopsis thaliana structural constituent of ribosome AT3G60245 mRNA, complete cds Length = 592 Score = 121 bits (61), Expect = 2e-24 Identities = 205/253 (81%) Strand = Plus / Minus Query: 204 tctgctccctcaaacggcggatggtgctcctgacggtgaccgcactagccgtgttcatgg 263 ||||||||||||| | | ||| ||||| || || ||||||||||| || |||||||| | Sbjct: 325 tctgctccctcaaccttctgatcgtgcttctaacagtgaccgcactggcggtgttcattg 266 Query: 264 tataggcaccaccagccttgaccttcccacagtccttgcatccccaaattccaacagctt 323 | || |||||||| ||||||||||| ||||| |||||||| ||||| || |||||||| | Sbjct: 265 tgtaagcaccacctgccttgaccttgccacaatccttgcaaccccagataccaacagcct 206 Query: 324 tcctcttcacagcaaacttcccgcagaattcacagaagtacttggagtgctgagacacct 383 | | |||||| | |||| || ||||| ||||||||||||||| |||||| |||| Sbjct: 205 ttcgcttcactccgtacttgccacagaactcacagaagtacttgctgtgctggctgacct 146 Query: 384 ccatcttcttgatctgcttacgcagactggcaccatacctggttccatacttcccgacga 443 |||||||||| |||||||| | | ||| |||||||| | ||||| || || ||||||| Sbjct: 145 ccatcttcttaatctgcttcctgatactcgcaccataacgtgttccgtatttgccgacga 86 Query: 444 ttccagccttctt 456 ||||| ||||||| Sbjct: 85 ttccaaccttctt 73
>gb|AY117196.1| Arabidopsis thaliana unknown protein (At3g60245) mRNA, complete cds Length = 310 Score = 121 bits (61), Expect = 2e-24 Identities = 205/253 (81%) Strand = Plus / Minus Query: 204 tctgctccctcaaacggcggatggtgctcctgacggtgaccgcactagccgtgttcatgg 263 ||||||||||||| | | ||| ||||| || || ||||||||||| || |||||||| | Sbjct: 268 tctgctccctcaaccttctgatcgtgcttctaacagtgaccgcactggcggtgttcattg 209 Query: 264 tataggcaccaccagccttgaccttcccacagtccttgcatccccaaattccaacagctt 323 | || |||||||| ||||||||||| ||||| |||||||| ||||| || |||||||| | Sbjct: 208 tgtaagcaccacctgccttgaccttgccacaatccttgcaaccccagataccaacagcct 149 Query: 324 tcctcttcacagcaaacttcccgcagaattcacagaagtacttggagtgctgagacacct 383 | | |||||| | |||| || ||||| ||||||||||||||| |||||| |||| Sbjct: 148 ttcgcttcactccgtacttgccacagaactcacagaagtacttgctgtgctggctgacct 89 Query: 384 ccatcttcttgatctgcttacgcagactggcaccatacctggttccatacttcccgacga 443 |||||||||| |||||||| | | ||| |||||||| | ||||| || || ||||||| Sbjct: 88 ccatcttcttaatctgcttcctgatactcgcaccataacgtgttccgtatttgccgacga 29 Query: 444 ttccagccttctt 456 ||||| ||||||| Sbjct: 28 ttccaaccttctt 16
>gb|AY080669.1| Arabidopsis thaliana unknown protein (At3g60245) mRNA, complete cds Length = 462 Score = 121 bits (61), Expect = 2e-24 Identities = 205/253 (81%) Strand = Plus / Minus Query: 204 tctgctccctcaaacggcggatggtgctcctgacggtgaccgcactagccgtgttcatgg 263 ||||||||||||| | | ||| ||||| || || ||||||||||| || |||||||| | Sbjct: 317 tctgctccctcaaccttctgatcgtgcttctaacagtgaccgcactggcggtgttcattg 258 Query: 264 tataggcaccaccagccttgaccttcccacagtccttgcatccccaaattccaacagctt 323 | || |||||||| ||||||||||| ||||| |||||||| ||||| || |||||||| | Sbjct: 257 tgtaagcaccacctgccttgaccttgccacaatccttgcaaccccagataccaacagcct 198 Query: 324 tcctcttcacagcaaacttcccgcagaattcacagaagtacttggagtgctgagacacct 383 | | |||||| | |||| || ||||| ||||||||||||||| |||||| |||| Sbjct: 197 ttcgcttcactccgtacttgccacagaactcacagaagtacttgctgtgctggctgacct 138 Query: 384 ccatcttcttgatctgcttacgcagactggcaccatacctggttccatacttcccgacga 443 |||||||||| |||||||| | | ||| |||||||| | ||||| || || ||||||| Sbjct: 137 ccatcttcttaatctgcttcctgatactcgcaccataacgtgttccgtatttgccgacga 78 Query: 444 ttccagccttctt 456 ||||| ||||||| Sbjct: 77 ttccaaccttctt 65
>emb|BX825839.1|CNS0A7IO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL66ZG08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 451 Score = 121 bits (61), Expect = 2e-24 Identities = 205/253 (81%) Strand = Plus / Minus Query: 204 tctgctccctcaaacggcggatggtgctcctgacggtgaccgcactagccgtgttcatgg 263 ||||||||||||| | | ||| ||||| || || ||||||||||| || |||||||| | Sbjct: 313 tctgctccctcaaccttctgatcgtgcttctaacagtgaccgcactggcggtgttcattg 254 Query: 264 tataggcaccaccagccttgaccttcccacagtccttgcatccccaaattccaacagctt 323 | || |||||||| ||||||||||| ||||| |||||||| ||||| || |||||||| | Sbjct: 253 tgtaagcaccacctgccttgaccttgccacaatccttgcaaccccagataccaacagcct 194 Query: 324 tcctcttcacagcaaacttcccgcagaattcacagaagtacttggagtgctgagacacct 383 | | |||||| | |||| || ||||| ||||||||||||||| |||||| |||| Sbjct: 193 ttcgcttcactccgtacttgccacagaactcacagaagtacttgctgtgctggctgacct 134 Query: 384 ccatcttcttgatctgcttacgcagactggcaccatacctggttccatacttcccgacga 443 |||||||||| |||||||| | | ||| |||||||| | ||||| || || ||||||| Sbjct: 133 ccatcttcttaatctgcttcctgatactcgcaccataacgtgttccgtatttgccgacga 74 Query: 444 ttccagccttctt 456 ||||| ||||||| Sbjct: 73 ttccaaccttctt 61
>emb|BX825643.1|CNS0A7I6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL52ZF12 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 472 Score = 121 bits (61), Expect = 2e-24 Identities = 205/253 (81%) Strand = Plus / Minus Query: 204 tctgctccctcaaacggcggatggtgctcctgacggtgaccgcactagccgtgttcatgg 263 ||||||||||||| | | ||| ||||| || || ||||||||||| || |||||||| | Sbjct: 308 tctgctccctcaaccttctgatcgtgcttctaacagtgaccgcactggcggtgttcattg 249 Query: 264 tataggcaccaccagccttgaccttcccacagtccttgcatccccaaattccaacagctt 323 | || |||||||| ||||||||||| ||||| |||||||| ||||| || |||||||| | Sbjct: 248 tgtaagcaccacctgccttgaccttgccacaatccttgcaaccccagataccaacagcct 189 Query: 324 tcctcttcacagcaaacttcccgcagaattcacagaagtacttggagtgctgagacacct 383 | | |||||| | |||| || ||||| ||||||||||||||| |||||| |||| Sbjct: 188 ttcgcttcactccgtacttgccacagaactcacagaagtacttgctgtgctggctgacct 129 Query: 384 ccatcttcttgatctgcttacgcagactggcaccatacctggttccatacttcccgacga 443 |||||||||| |||||||| | | ||| |||||||| | ||||| || || ||||||| Sbjct: 128 ccatcttcttaatctgcttcctgatactcgcaccataacgtgttccgtatttgccgacga 69 Query: 444 ttccagccttctt 456 ||||| ||||||| Sbjct: 68 ttccaaccttctt 56
>gb|AY088178.1| Arabidopsis thaliana clone 42545 mRNA, complete sequence Length = 466 Score = 121 bits (61), Expect = 2e-24 Identities = 205/253 (81%) Strand = Plus / Minus Query: 204 tctgctccctcaaacggcggatggtgctcctgacggtgaccgcactagccgtgttcatgg 263 ||||||||||||| | | ||| ||||| || || ||||||||||| || |||||||| | Sbjct: 325 tctgctccctcaaccttctgatcgtgcttctaacagtgaccgcactggcggtgttcattg 266 Query: 264 tataggcaccaccagccttgaccttcccacagtccttgcatccccaaattccaacagctt 323 | || |||||||| ||||||||||| ||||| |||||||| ||||| || |||||||| | Sbjct: 265 tgtaagcaccacctgccttgaccttgccacaatccttgcaaccccagataccaacagcct 206 Query: 324 tcctcttcacagcaaacttcccgcagaattcacagaagtacttggagtgctgagacacct 383 | | |||||| | |||| || ||||| ||||||||||||||| |||||| |||| Sbjct: 205 ttcgcttcactccgtacttgccacagaactcacagaagtacttgctgtgctggctgacct 146 Query: 384 ccatcttcttgatctgcttacgcagactggcaccatacctggttccatacttcccgacga 443 |||||||||| |||||||| | | ||| |||||||| | ||||| || || ||||||| Sbjct: 145 ccatcttcttaatctgcttcctgatactcgcaccataacgtgttccgtatttgccgacga 86 Query: 444 ttccagccttctt 456 ||||| ||||||| Sbjct: 85 ttccaaccttctt 73
>emb|BX822513.1|CNS0A7MD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB44ZB04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 437 Score = 105 bits (53), Expect = 1e-19 Identities = 203/253 (80%) Strand = Plus / Minus Query: 204 tctgctccctcaaacggcggatggtgctcctgacggtgaccgcactagccgtgttcatgg 263 ||||||||||||| | | ||| ||||| || || ||||||||||| || |||||||| | Sbjct: 308 tctgctccctcaaccttctgatcgtgcttcttacagtgaccgcactggcggtgttcattg 249 Query: 264 tataggcaccaccagccttgaccttcccacagtccttgcatccccaaattccaacagctt 323 | || |||||||| ||||||||||| ||||| |||||||| ||||| || || ||||| | Sbjct: 248 tgtaagcaccacctgccttgaccttgccacaatccttgcaaccccagatacctacagcct 189 Query: 324 tcctcttcacagcaaacttcccgcagaattcacagaagtacttggagtgctgagacacct 383 | | |||||| | |||| || ||||| |||||||||| |||| |||||| |||| Sbjct: 188 ttcgcttcactccgtacttgccacagaactcacagaagttcttgctgtgctggctgacct 129 Query: 384 ccatcttcttgatctgcttacgcagactggcaccatacctggttccatacttcccgacga 443 |||||||||| |||||||| | | ||| |||||||| | ||||| || || ||||||| Sbjct: 128 ccatcttcttaatctgcttcctgatactcgcaccataacgtgttccgtatttgccgacga 69 Query: 444 ttccagccttctt 456 ||||| ||||||| Sbjct: 68 ttccaaccttctt 56
>dbj|AK062044.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-A08, full insert sequence Length = 1791 Score = 105 bits (53), Expect = 1e-19 Identities = 71/77 (92%) Strand = Plus / Minus Query: 397 ctgcttacgcagactggcaccatacctggttccatacttcccgacgattccagccttctt 456 ||||||||||| |||||||||||||||||| ||||| || || |||||||| |||||||| Sbjct: 159 ctgcttacgcaaactggcaccatacctggtaccatatttgccaacgattcctgccttctt 100 Query: 457 ggtgcgcttcgtcatct 473 ||||||||||||||||| Sbjct: 99 ggtgcgcttcgtcatct 83
>gb|AF127042.1|AF127042 Gossypium hirsutum 60S ribosomal protein L37a (RL37a) mRNA, complete cds Length = 619 Score = 101 bits (51), Expect = 2e-18 Identities = 165/203 (81%) Strand = Plus / Minus Query: 254 gtgttcatggtataggcaccaccagccttgaccttcccacagtccttgcatccccaaatt 313 ||||||| ||||| ||||||||||| || || ||||| || ||||||| ||||| ||| Sbjct: 252 gtgttcaaagtataagcaccaccagctttaactttcccgcaagccttgcagccccagatt 193 Query: 314 ccaacagctttcctcttcacagcaaacttcccgcagaattcacagaagtacttggagtgc 373 || ||||| || |||||||| ||| |||| || ||||| || |||||||||||| ||| Sbjct: 192 cctacagcctttctcttcactgcatactttccacagaactcgcagaagtacttgctgtgt 133 Query: 374 tgagacacctccatcttcttgatctgcttacgcagactggcaccatacctggttccatac 433 ||| ||||||||||||||| || ||||| | || |||||||||||| | ||| ||||| Sbjct: 132 tgactcacctccatcttcttaatttgcttcctcaaactggcaccataacgggtaccatat 73 Query: 434 ttcccgacgattccagccttctt 456 || || || ||||| |||||||| Sbjct: 72 tttccaacaattccggccttctt 50
>gb|AF363029.3|AF363029 Branchiostoma belcheri 60S ribosomal protein L37A mRNA, complete cds Length = 447 Score = 93.7 bits (47), Expect = 5e-16 Identities = 77/87 (88%) Strand = Plus / Minus Query: 361 gtacttggagtgctgagacacctccatcttcttgatctgcttacgcagactggcaccata 420 |||||||||||||||||||||||||||||||||||| |||||||||| ||| ||||| Sbjct: 122 gtacttggagtgctgagacacctccatcttcttgatggtcttacgcagagaggcgccata 63 Query: 421 cctggttccatacttcccgacgattcc 447 | ||| || ||||||||||||||||| Sbjct: 62 acgggtgccgtacttcccgacgattcc 36
>gb|AY168770.1| Branchiostoma belcheri tsingtaunese ribosomal protein L37A mRNA, complete cds Length = 477 Score = 93.7 bits (47), Expect = 5e-16 Identities = 77/87 (88%) Strand = Plus / Minus Query: 361 gtacttggagtgctgagacacctccatcttcttgatctgcttacgcagactggcaccata 420 |||||||||||||||||||||||||||||||||||| |||||||||| ||| ||||| Sbjct: 135 gtacttggagtgctgagacacctccatcttcttgatggtcttacgcagagaggcgccata 76 Query: 421 cctggttccatacttcccgacgattcc 447 | ||| || ||||||||||||||||| Sbjct: 75 acgggtgccgtacttcccgacgattcc 49
>gb|AY310764.1| Nicotiana benthamiana clone 6-280 unknown mRNA Length = 402 Score = 85.7 bits (43), Expect = 1e-13 Identities = 190/239 (79%) Strand = Plus / Minus Query: 221 cggatggtgctcctgacggtgaccgcactagccgtgttcatggtataggcaccaccagcc 280 ||||| |||||||| || || || ||||| || ||||||| ||||| ||||| || || Sbjct: 250 cggattgtgctcctaactgtcacagcacttgcagtgttcaatgtataagcaccgcctgct 191 Query: 281 ttgaccttcccacagtccttgcatccccaaattccaacagctttcctcttcacagcaaac 340 ||||| || || || || ||||| |||||||| || || ||||| |||||||| || || Sbjct: 190 ttgactttgccgcaatctttgcagccccaaatccccactgcttttctcttcactgcgtac 131 Query: 341 ttcccgcagaattcacagaagtacttggagtgctgagacacctccatcttcttgatctgc 400 || || || || ||||| || |||||| ||||| |||||||| ||||| |||||| Sbjct: 130 tttccacaaaactcacaaaaatacttgctatgctggctaacctccattttcttaatctgc 71 Query: 401 ttacgcagactggcaccatacctggttccatacttcccgacgattccagccttcttggt 459 || |||| |||||||||||| | ||| ||||| ||||| || ||||||||||||||||| Sbjct: 70 tttcgcaaactggcaccataacgggtaccatatttcccaactattccagccttcttggt 12
>emb|BX826117.1|CNS0A7I3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL85ZD12 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 435 Score = 77.8 bits (39), Expect = 3e-11 Identities = 171/215 (79%) Strand = Plus / Minus Query: 242 accgcactagccgtgttcatggtataggcaccaccagccttgaccttcccacagtccttg 301 |||||||| || |||||||| || || ||||| || ||||||||||| ||||| |||||| Sbjct: 278 accgcactggcggtgttcattgtgtaagcaccccctgccttgaccttgccacaatccttg 219 Query: 302 catccccaaattccaacagctttcctcttcacagcaaacttcccgcagaattcacagaag 361 || ||||| || |||||||| || | ||| || | |||| || ||||| | ||||||| Sbjct: 218 caaccccagataccaacagcctttcgctttactccgtacttgccacagaactaacagaag 159 Query: 362 tacttggagtgctgagacacctccatcttcttgatctgcttacgcagactggcaccatac 421 |||||| |||||| |||||||||||||| |||||||| | | ||| |||||| | Sbjct: 158 tacttgctgtgctggctgacctccatcttcttaatctgctttctgaaactcgcaccaaaa 99 Query: 422 ctggttccatacttcccgacgattccagccttctt 456 | ||||| || || |||||||||||| ||||||| Sbjct: 98 cgtgttccgtatttgccgacgattccaaccttctt 64
>gb|AC009991.5|ATAC009991 Arabidopsis thaliana chromosome III BAC F9F8 genomic sequence, complete sequence Length = 101284 Score = 73.8 bits (37), Expect = 5e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 344 ccgcagaattcacagaagtacttggagtgctgagacacctccatcttcttgatctgctta 403 |||||||| ||||||||||||||| ||| ||| ||| |||||||||||||||||||| Sbjct: 91815 ccgcagaactcacagaagtacttgttgtgttgactcacttccatcttcttgatctgcttc 91874 Query: 404 cgcagactggcaccata 420 | |||||||||||||| Sbjct: 91875 ctaagactggcaccata 91891 Score = 69.9 bits (35), Expect = 8e-09 Identities = 107/131 (81%) Strand = Plus / Plus Query: 200 tcggtctgctccctcaaacggcggatggtgctcctgacggtgaccgcactagccgtgttc 259 ||||| ||||| ||||| || | |||||| ||||| || || || ||||||||||||||| Sbjct: 91556 tcggtttgctctctcaaccgcctgatggtactcctaacagtcacagcactagccgtgttc 91615 Query: 260 atggtataggcaccaccagccttgaccttcccacagtccttgcatccccaaattccaaca 319 || || || ||||| || || || || ||||| || || ||||| |||||||| |||||| Sbjct: 91616 attgtgtatgcaccgcctgctttcactttcccgcaatctttgcacccccaaatgccaaca 91675 Query: 320 gctttcctctt 330 |||||||||| Sbjct: 91676 actttcctctt 91686
>gb|AY310766.1| Nicotiana benthamiana clone 7-083 unknown mRNA Length = 195 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 380 acctccatcttcttgatctgcttacgcagactggcaccatacctggttccatacttcccg 439 |||||||| ||||| |||||||| |||| |||||||||||| | ||| ||||| ||||| Sbjct: 118 acctccattttcttaatctgctttcgcaaactggcaccataacgggtaccatatttccca 59 Query: 440 acgattccagccttcttggt 459 || ||||||||||| ||||| Sbjct: 58 actattccagccttgttggt 39
>ref|NM_164628.1| Drosophila melanogaster Ribosomal protein L37A CG5827-RB, transcript variant B (RpL37A), mRNA Length = 696 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 383 tccatcttcttgatctgcttacgcagactggcaccatacctggttccatacttcccgacg 442 ||||||||||||| | ||||||||| ||||||||| | ||| ||||| || || ||| Sbjct: 206 tccatcttcttgaccatcttacgcagggaggcaccataacgggtaccatatttaccaacg 147 Query: 443 attccagccttcttggtgcgctt 465 |||||| |||||||||||||||| Sbjct: 146 attccaaccttcttggtgcgctt 124
>ref|NM_080042.2| Drosophila melanogaster Ribosomal protein L37A CG5827-RA, transcript variant A (RpL37A), mRNA Length = 659 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 383 tccatcttcttgatctgcttacgcagactggcaccatacctggttccatacttcccgacg 442 ||||||||||||| | ||||||||| ||||||||| | ||| ||||| || || ||| Sbjct: 169 tccatcttcttgaccatcttacgcagggaggcaccataacgggtaccatatttaccaacg 110 Query: 443 attccagccttcttggtgcgctt 465 |||||| |||||||||||||||| Sbjct: 109 attccaaccttcttggtgcgctt 87
>gb|AY071725.1| Drosophila melanogaster RH41593 full length cDNA Length = 524 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 383 tccatcttcttgatctgcttacgcagactggcaccatacctggttccatacttcccgacg 442 ||||||||||||| | ||||||||| ||||||||| | ||| ||||| || || ||| Sbjct: 169 tccatcttcttgaccatcttacgcagggaggcaccataacgggtaccatatttaccaacg 110 Query: 443 attccagccttcttggtgcgctt 465 |||||| |||||||||||||||| Sbjct: 109 attccaaccttcttggtgcgctt 87
>gb|AY071189.1| Drosophila melanogaster RE23595 full length cDNA Length = 519 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 383 tccatcttcttgatctgcttacgcagactggcaccatacctggttccatacttcccgacg 442 ||||||||||||| | ||||||||| ||||||||| | ||| ||||| || || ||| Sbjct: 168 tccatcttcttgaccatcttacgcagggaggcaccataacgggtaccatatttaccaacg 109 Query: 443 attccagccttcttggtgcgctt 465 |||||| |||||||||||||||| Sbjct: 108 attccaaccttcttggtgcgctt 86
>gb|AC008233.3|AC008233 Drosophila melanogaster, chromosome 2L, region 25C-25C, BAC clone BACR13M11, complete sequence Length = 162387 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 383 tccatcttcttgatctgcttacgcagactggcaccatacctggttccatacttcccgacg 442 ||||||||||||| | ||||||||| ||||||||| | ||| ||||| || || ||| Sbjct: 127615 tccatcttcttgaccatcttacgcagggaggcaccataacgggtaccatatttaccaacg 127556 Query: 443 attccagccttcttggtgcgctt 465 |||||| |||||||||||||||| Sbjct: 127555 attccaaccttcttggtgcgctt 127533
>gb|AE003608.5| Drosophila melanogaster chromosome 2L, section 17 of 83 of the complete sequence Length = 174887 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 383 tccatcttcttgatctgcttacgcagactggcaccatacctggttccatacttcccgacg 442 ||||||||||||| | ||||||||| ||||||||| | ||| ||||| || || ||| Sbjct: 129888 tccatcttcttgaccatcttacgcagggaggcaccataacgggtaccatatttaccaacg 129829 Query: 443 attccagccttcttggtgcgctt 465 |||||| |||||||||||||||| Sbjct: 129828 attccaaccttcttggtgcgctt 129806
>emb|AL163852.1|ATF27H5 Arabidopsis thaliana DNA chromosome 3, BAC clone F27H5 Length = 88548 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 269 gcaccaccagccttgaccttcccacagtccttgcatccccaaattccaacagc 321 |||||||| ||||||||||| ||||| |||||||| ||||| || |||||||| Sbjct: 44578 gcaccacctgccttgaccttgccacaatccttgcaaccccagataccaacagc 44526 Score = 48.1 bits (24), Expect = 0.029 Identities = 48/56 (85%) Strand = Plus / Minus Query: 347 cagaattcacagaagtacttggagtgctgagacacctccatcttcttgatctgctt 402 ||||| ||||||||||||||| |||||| |||||||||||||| |||||||| Sbjct: 44402 cagaactcacagaagtacttgctgtgctggctgacctccatcttcttaatctgctt 44347
>gb|AF263518.1|AF263518 Arabidopsis thaliana protein synthesis initiation factor 4G (EIF4G) gene, complete cds Length = 10989 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 269 gcaccaccagccttgaccttcccacagtccttgcatccccaaattccaacagc 321 |||||||| ||||||||||| ||||| |||||||| ||||| || |||||||| Sbjct: 7467 gcaccacctgccttgaccttgccacaatccttgcaaccccagataccaacagc 7415 Score = 48.1 bits (24), Expect = 0.029 Identities = 48/56 (85%) Strand = Plus / Minus Query: 347 cagaattcacagaagtacttggagtgctgagacacctccatcttcttgatctgctt 402 ||||| ||||||||||||||| |||||| |||||||||||||| |||||||| Sbjct: 7291 cagaactcacagaagtacttgctgtgctggctgacctccatcttcttaatctgctt 7236
>ref|XM_675471.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN7294.2), mRNA Length = 2133 Score = 52.0 bits (26), Expect = 0.002 Identities = 83/102 (81%) Strand = Plus / Minus Query: 370 gtgctgagacacctccatcttcttgatctgcttacgcagactggcaccatacctggttcc 429 |||||| ||||| ||||||||||| | |||||||||||| |||||| || ||||| || Sbjct: 102 gtgctgggacacttccatcttcttcacctgcttacgcagggaggcaccgtatctggtacc 43 Query: 430 atacttcccgacgattccagccttcttggtgcgcttcgtcat 471 ||| || ||| ||| || ||||||| |||||||| ||||| Sbjct: 42 atatttaccggtgataccgaccttcttagtgcgcttggtcat 1
>gb|DQ445521.1| Graphocephala atropunctata isolate WHGA0587 ribosomal protein L37Ae-like protein mRNA, complete cds Length = 279 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 413 gcaccatacctggttccatacttcccgacgattccagccttcttggtgcg 462 |||||||| | |||||||||||| ||| ||||||| ||||||||||||| Sbjct: 59 gcaccataacgggttccatactttccggtgattccaaccttcttggtgcg 10
>dbj|AB226168.1| Aspergillus oryzae cDNA, contig sequence: AoEST3026 Length = 520 Score = 48.1 bits (24), Expect = 0.029 Identities = 84/104 (80%) Strand = Plus / Minus Query: 370 gtgctgagacacctccatcttcttgatctgcttacgcagactggcaccatacctggttcc 429 |||||| ||||| ||||||||||| | |||||||||||| |||||| || ||||| || Sbjct: 167 gtgctgggacacttccatcttcttcacctgcttacgcagggaggcaccgtatctggtacc 108 Query: 430 atacttcccgacgattccagccttcttggtgcgcttcgtcatct 473 ||| || || ||| || ||||||| |||||||| ||||||| Sbjct: 107 atatttacccgtgataccgaccttcttagtgcgcttggtcatct 64
>ref|XM_675035.1| Plasmodium berghei strain ANKA hypothetical protein (PB001065.02.0) partial mRNA Length = 1821 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 69 cctaaaatcagaagacaaaatta 91 ||||||||||||||||||||||| Sbjct: 1479 cctaaaatcagaagacaaaatta 1501
>dbj|AP007162.1| Aspergillus oryzae RIB40 genomic DNA, SC102 Length = 1779707 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Minus Query: 370 gtgctgagacacctccatcttcttgatctgcttacgcag 408 |||||| ||||| ||||||||||| | |||||||||||| Sbjct: 334935 gtgctgggacacttccatcttcttcacctgcttacgcag 334897
>dbj|AK168182.1| Mus musculus CRL-1722 L5178Y-R cDNA, RIKEN full-length enriched library, clone:I730064F20 product:ribosomal protein L37a, full insert sequence Length = 362 Score = 46.1 bits (23), Expect = 0.12 Identities = 44/51 (86%) Strand = Plus / Minus Query: 412 ggcaccatacctggttccatacttcccgacgattccagccttcttggtgcg 462 ||||||||||| ||| || ||||| |||||||| || ||||||||||||| Sbjct: 92 ggcaccataccgggtcccgtacttgccgacgatgccgaccttcttggtgcg 42
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 474 cggcggcgagtagcaggaggcggctgc 500 |||||||||| |||||||||||||||| Sbjct: 1651578 cggcggcgaggagcaggaggcggctgc 1651604
>gb|AE001439.1| Helicobacter pylori J99, complete genome Length = 1643831 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 61 tcaaagatcctaaaatcagaaga 83 ||||||||||||||||||||||| Sbjct: 491552 tcaaagatcctaaaatcagaaga 491574
>dbj|AB084028.1| Helicobacter pylori gyrB gene for gyrase B, partial cds, strain:ATCC11638 Length = 1168 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 61 tcaaagatcctaaaatcagaaga 83 ||||||||||||||||||||||| Sbjct: 1061 tcaaagatcctaaaatcagaaga 1083
>ref|XM_977209.1| PREDICTED: Mus musculus similar to 60S ribosomal protein L37a (LOC669803), mRNA Length = 394 Score = 44.1 bits (22), Expect = 0.46 Identities = 43/50 (86%) Strand = Plus / Minus Query: 413 gcaccatacctggttccatacttcccgacgattccagccttcttggtgcg 462 |||||||| | |||||| ||||| |||||||| || ||||||||||||| Sbjct: 81 gcaccatagcgggttccgtacttgccgacgatgccgaccttcttggtgcg 32
>ref|XM_906777.2| PREDICTED: Mus musculus similar to 60S ribosomal protein L37a (LOC632599), mRNA Length = 393 Score = 44.1 bits (22), Expect = 0.46 Identities = 43/50 (86%) Strand = Plus / Minus Query: 413 gcaccatacctggttccatacttcccgacgattccagccttcttggtgcg 462 |||||||| | |||||| ||||| |||||||| || ||||||||||||| Sbjct: 81 gcaccatagcgggttccgtacttgccgacgatgccgaccttcttggtgcg 32
>ref|XM_001004924.1| PREDICTED: Mus musculus similar to 60S ribosomal protein L37a (LOC668941), mRNA Length = 393 Score = 44.1 bits (22), Expect = 0.46 Identities = 43/50 (86%) Strand = Plus / Minus Query: 413 gcaccatacctggttccatacttcccgacgattccagccttcttggtgcg 462 |||||||| | |||||| ||||| |||||||| || ||||||||||||| Sbjct: 81 gcaccatagcgggttccgtacttgccgacgatgccgaccttcttggtgcg 32
>gb|AC124194.3| Mus musculus BAC clone RP23-277L21 from 2, complete sequence Length = 181676 Score = 44.1 bits (22), Expect = 0.46 Identities = 43/50 (86%) Strand = Plus / Minus Query: 413 gcaccatacctggttccatacttcccgacgattccagccttcttggtgcg 462 |||||||| | |||||| ||||| |||||||| || ||||||||||||| Sbjct: 118095 gcaccatagcgggttccgtacttgccgacgatgccgaccttcttggtgcg 118046
>gb|DQ066199.1| Ixodes scapularis isolate ISUFL72 ribosomal protein L37A mRNA, complete cds Length = 279 Score = 44.1 bits (22), Expect = 0.46 Identities = 46/54 (85%) Strand = Plus / Minus Query: 412 ggcaccatacctggttccatacttcccgacgattccagccttcttggtgcgctt 465 ||||||||||||||| || |||||||| ||||| || ||||||| || ||||| Sbjct: 60 ggcaccatacctggtgccgtacttccccacgatcccgaccttcttcgtacgctt 7
>emb|AL928935.14| Mouse DNA sequence from clone RP24-114E18 on chromosome 2, complete sequence Length = 123074 Score = 44.1 bits (22), Expect = 0.46 Identities = 43/50 (86%) Strand = Plus / Plus Query: 413 gcaccatacctggttccatacttcccgacgattccagccttcttggtgcg 462 |||||||| | |||||| ||||| |||||||| || ||||||||||||| Sbjct: 66832 gcaccatagcgggttccgtacttgccgacgatgccgaccttcttggtgcg 66881
>ref|XM_817786.1| Trypanosoma brucei TREU927 60S ribosomal proteins L37 (Tb10.70.0465) partial mRNA Length = 282 Score = 42.1 bits (21), Expect = 1.8 Identities = 48/57 (84%) Strand = Plus / Minus Query: 338 aacttcccgcagaattcacagaagtacttggagtgctgagacacctccatcttcttg 394 |||||||||||||| |||||||| || | |||||||||||||||| ||||||| Sbjct: 134 aacttcccgcagaaggaacagaagtgtttcgcatgctgagacacctccagcttcttg 78
>ref|XM_720393.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY05085) partial mRNA Length = 5438 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 69 cctaaaatcagaagacaaaat 89 ||||||||||||||||||||| Sbjct: 3179 cctaaaatcagaagacaaaat 3199
>emb|BX908798.1| Parachlamydia-related symbiont UWE25, complete genome Length = 2414465 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 119 aaaatacagatatttgaagtctttaattccact 151 |||||||||| ||||||| ||||||||||||| Sbjct: 1371153 aaaatacagaaatttgaaccctttaattccact 1371185
>emb|BX571814.10| Zebrafish DNA sequence from clone XX-7A10 in linkage group 25, complete sequence Length = 87559 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 109 ctgaatagccaaaatacagat 129 ||||||||||||||||||||| Sbjct: 29992 ctgaatagccaaaatacagat 30012
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 371 tgctgagacacctccatcttcttga 395 ||||||||||||| ||||||||||| Sbjct: 29190642 tgctgagacaccttcatcttcttga 29190666
>dbj|AP004324.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1215_E11 Length = 105301 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 371 tgctgagacacctccatcttcttga 395 ||||||||||||| ||||||||||| Sbjct: 57929 tgctgagacaccttcatcttcttga 57953
>dbj|AK102136.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033085H14, full insert sequence Length = 2244 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 371 tgctgagacacctccatcttcttga 395 ||||||||||||| ||||||||||| Sbjct: 1061 tgctgagacaccttcatcttcttga 1037
>dbj|AK073179.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033004F21, full insert sequence Length = 2507 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 371 tgctgagacacctccatcttcttga 395 ||||||||||||| ||||||||||| Sbjct: 1392 tgctgagacaccttcatcttcttga 1368
>dbj|AK061641.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-B03, full insert sequence Length = 1571 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 371 tgctgagacacctccatcttcttga 395 ||||||||||||| ||||||||||| Sbjct: 458 tgctgagacaccttcatcttcttga 434
>gb|AC150530.4| Bos taurus BAC CH240-86O22 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 190177 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 363 acttggagtgctgagacacc 382 |||||||||||||||||||| Sbjct: 8177 acttggagtgctgagacacc 8158
>ref|XM_598735.2| PREDICTED: Bos taurus similar to zinc finger protein 333 (LOC520490), partial mRNA Length = 1119 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 285 ccttcccacagtccttgcat 304 |||||||||||||||||||| Sbjct: 472 ccttcccacagtccttgcat 453
>ref|XM_960237.1| Neurospora crassa OR74A hypothetical protein (NCU03230.1) partial mRNA Length = 1131 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 379 cacctccatcttcttgatct 398 |||||||||||||||||||| Sbjct: 975 cacctccatcttcttgatct 956
>ref|XM_330665.1| Neurospora crassa OR74A hypothetical protein (NCU03230.1) partial mRNA Length = 1131 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 379 cacctccatcttcttgatct 398 |||||||||||||||||||| Sbjct: 975 cacctccatcttcttgatct 956
>ref|XM_817189.1| Trypanosoma brucei TREU927 60S ribosomal protein L37a (Tb10.100.0110) partial mRNA Length = 282 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 371 tgctgagacacctccatcttcttg 394 |||||||||||||||| ||||||| Sbjct: 101 tgctgagacacctccagcttcttg 78
>gb|AC112406.5| Rattus norvegicus 11 BAC CH230-329D3 (Children's Hospital Oakland Research Institute) complete sequence Length = 182245 Score = 40.1 bits (20), Expect = 7.1 Identities = 41/48 (85%) Strand = Plus / Plus Query: 424 ggttccatacttcccgacgattccagccttcttggtgcgcttcgtcat 471 ||||||||| ||||||||||| || | ||||||||||| || ||||| Sbjct: 132455 ggttccatatttcccgacgatcccgactttcttggtgcgtttagtcat 132502
>emb|AL117373.14|HS1188A21 Human DNA sequence from clone RP5-1188A21 on chromosome 6q22.32-22.3, complete sequence Length = 78603 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 aaatacagatatttgaagtc 139 |||||||||||||||||||| Sbjct: 23378 aaatacagatatttgaagtc 23397
>gb|AC148582.14| Gasterosteus aculeatus clone ch213-241e10, complete sequence Length = 209278 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 cagatatttgaagtctttaa 144 |||||||||||||||||||| Sbjct: 98111 cagatatttgaagtctttaa 98092
>gb|AC090858.6| Homo sapiens chromosome 11, clone RP11-676E14, complete sequence Length = 168906 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 aaaatcagaagacaaaattactaa 95 ||||||||||||||||| |||||| Sbjct: 135917 aaaatcagaagacaaaagtactaa 135940
>dbj|AB232923.1| Oryzias latipes hox gene cluster, complete cds, contains hoxDa Length = 225033 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 cagatatttgaagtctttaa 144 |||||||||||||||||||| Sbjct: 162123 cagatatttgaagtctttaa 162104
>gb|AC021436.8| Homo sapiens chromosome , clone RP11-121C18, complete sequence Length = 180765 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 aaaatcagaagacaaaattactaa 95 ||||||||||||||||| |||||| Sbjct: 40656 aaaatcagaagacaaaagtactaa 40679
>gb|AC021735.8| Homo sapiens chromosome 18, clone RP11-107G7, complete sequence Length = 170510 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 71 taaaatcagaagacaaaattacta 94 ||||||||||| |||||||||||| Sbjct: 22900 taaaatcagaacacaaaattacta 22877
>gb|AC091903.2| Homo sapiens chromosome 5 clone RP11-182I21, complete sequence Length = 194860 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 taaaatcagaagacaaaatt 90 |||||||||||||||||||| Sbjct: 96526 taaaatcagaagacaaaatt 96507
>ref|NM_064556.3| Caenorhabditis elegans Ribosomal Protein, Large subunit family member (rpl-43) (rpl-43) mRNA, complete cds Length = 410 Score = 40.1 bits (20), Expect = 7.1 Identities = 38/44 (86%) Strand = Plus / Minus Query: 413 gcaccatacctggttccatacttcccgacgattccagccttctt 456 |||||||| | |||||| ||||| ||||||||||| ||||||| Sbjct: 77 gcaccataacgggttccgtactttccgacgattccgaccttctt 34
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 488 aggaggcggctgctgcggcg 507 |||||||||||||||||||| Sbjct: 16205922 aggaggcggctgctgcggcg 16205941
>gb|AC105388.3| Homo sapiens BAC clone RP11-173C9 from 4, complete sequence Length = 120662 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 actactgaattcctcaagat 176 |||||||||||||||||||| Sbjct: 118674 actactgaattcctcaagat 118655
>gb|AC158540.2| Pan troglodytes BAC clone CH251-315F23 from chromosome unknown, complete sequence Length = 200678 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 aaatacagatatttgaagtc 139 |||||||||||||||||||| Sbjct: 141128 aaatacagatatttgaagtc 141109
>gb|AC158117.2| Pan troglodytes BAC clone CH251-437A17 from chromosome unknown, complete sequence Length = 154069 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 aaatacagatatttgaagtc 139 |||||||||||||||||||| Sbjct: 17829 aaatacagatatttgaagtc 17848
>gb|AF155830.1|AF155830 Rhizobium leguminosarum bv. viciae putative uridylyltransferase/uridylyl-removing enzyme (glnD) gene, complete cds; and MviN (mviN) gene, partial cds Length = 4087 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 453 tcttggtgcgcttcgtcatc 472 |||||||||||||||||||| Sbjct: 3833 tcttggtgcgcttcgtcatc 3852
>ref|XM_577778.1| PREDICTED: Rattus norvegicus similar to zinc finger protein 545 (LOC502314), mRNA Length = 1581 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 285 ccttcccacagtccttgcat 304 |||||||||||||||||||| Sbjct: 1018 ccttcccacagtccttgcat 999
>dbj|AP005570.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1344_B01 Length = 170912 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 488 aggaggcggctgctgcggcg 507 |||||||||||||||||||| Sbjct: 22438 aggaggcggctgctgcggcg 22457
>dbj|AP005424.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0556H01 Length = 149800 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 488 aggaggcggctgctgcggcg 507 |||||||||||||||||||| Sbjct: 110523 aggaggcggctgctgcggcg 110542
>emb|AL110490.1|CEY48B6A Caenorhabditis elegans YAC Y48B6A, complete sequence Length = 101295 Score = 40.1 bits (20), Expect = 7.1 Identities = 38/44 (86%) Strand = Plus / Minus Query: 413 gcaccatacctggttccatacttcccgacgattccagccttctt 456 |||||||| | |||||| ||||| ||||||||||| ||||||| Sbjct: 5004 gcaccataacgggttccgtactttccgacgattccgaccttctt 4961 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,793,436 Number of Sequences: 3902068 Number of extensions: 4793436 Number of successful extensions: 97298 Number of sequences better than 10.0: 92 Number of HSP's better than 10.0 without gapping: 92 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 97014 Number of HSP's gapped (non-prelim): 265 length of query: 526 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 503 effective length of database: 17,143,297,704 effective search space: 8623078745112 effective search space used: 8623078745112 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
