ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags29j16 |
|---|---|
| Clone Library Name | barley_pub |
>MPV17_BRARE (Q5TZ51) Protein Mpv17| Length = 177 Score = 85.9 bits (211), Expect = 1e-16 Identities = 43/107 (40%), Positives = 64/107 (59%), Gaps = 1/107 (0%) Frame = -2 Query: 608 WYLYLSKLVTISGTSGVISRLLLDQFIFSPVFIGVFMSLLVTLEGKP-SLVVPKLKQEWF 432 WY L KLVT S + ++L+DQ F+P F+G F+ + TL G V KL++++ Sbjct: 70 WYKVLDKLVTGGTKSAALKKMLVDQVGFAPCFLGAFLGITGTLNGLTVEENVAKLQRDYT 129 Query: 431 SSLIANWQLWIPFQFLNFYFVPQKLQVLAANFVALAWNVILSYKAHK 291 +LI+N+ LW P Q NFYF+P ++ VA+ WN LS+KA+K Sbjct: 130 DALISNYYLWPPVQIANFYFIPLHHRLAVVQIVAVVWNSYLSWKANK 176
>MPV17_XENLA (Q66GV0) Protein Mpv17| Length = 177 Score = 83.2 bits (204), Expect = 7e-16 Identities = 40/107 (37%), Positives = 63/107 (58%), Gaps = 1/107 (0%) Frame = -2 Query: 608 WYLYLSKLVTISGTSGVISRLLLDQFIFSPVFIGVFMSLLVTLEG-KPSLVVPKLKQEWF 432 WY L +++ SG + ++LLDQ F+P F+G F+S+ L G + KLK+++ Sbjct: 70 WYKILDRIIPGSGKPVALKKMLLDQVAFAPCFLGCFLSIASALNGLSGEQIWGKLKRDYK 129 Query: 431 SSLIANWQLWIPFQFLNFYFVPQKLQVLAANFVALAWNVILSYKAHK 291 +LI N+ +W Q NFYF+P ++ FVA+ WN LS+KA+K Sbjct: 130 DALITNYYIWPAVQVANFYFIPLYHRLAVVQFVAIIWNSYLSWKANK 176
>SYM1_GIBZE (Q4IPX8) Protein SYM1| Length = 175 Score = 80.1 bits (196), Expect = 6e-15 Identities = 37/104 (35%), Positives = 64/104 (61%), Gaps = 2/104 (1%) Frame = -2 Query: 608 WYLYLSKLVTISGT--SGVISRLLLDQFIFSPVFIGVFMSLLVTLEGKPSLVVPKLKQEW 435 W+ +L++ V + + V++R+ DQ F+PV IGVF+S + T+EGK V ++ + W Sbjct: 70 WFAFLARRVNVRNNKKAEVLARVACDQLGFAPVMIGVFLSSMATMEGKS--VKERIDKTW 127 Query: 434 FSSLIANWQLWIPFQFLNFYFVPQKLQVLAANFVALAWNVILSY 303 + +L ANW +W Q +NF +P + ++ AN +A+ WN LS+ Sbjct: 128 WPALKANWMVWPAVQVINFSLIPLQYRLFFANIIAIGWNSYLSW 171
>PXMP2_MOUSE (P42925) Peroxisomal membrane protein 2 (22 kDa peroxisomal| membrane protein) Length = 193 Score = 76.3 bits (186), Expect = 9e-14 Identities = 38/104 (36%), Positives = 61/104 (58%), Gaps = 1/104 (0%) Frame = -2 Query: 614 HFWYLYLSKLVTISGTSGVISRLLLDQFIFSPVFIGVFMSLLVTLEGKP-SLVVPKLKQE 438 H+ YL++ V + RLLLD+ F+P F+ +F ++ LEGK S+ V K++ Sbjct: 86 HYLYLFMEYSVPPEVPWASVKRLLLDRLFFAPTFLLLFFFVMNLLEGKNVSVFVAKMRSG 145 Query: 437 WFSSLIANWQLWIPFQFLNFYFVPQKLQVLAANFVALAWNVILS 306 ++ +L NW++W P QF+N +VP + +VL AN AL W L+ Sbjct: 146 FWPALQMNWRMWTPLQFININYVPLQFRVLFANMAALFWYAYLA 189
>SYM1_NEUCR (Q7SCY7) Protein sym-1| Length = 190 Score = 76.3 bits (186), Expect = 9e-14 Identities = 36/104 (34%), Positives = 62/104 (59%), Gaps = 2/104 (1%) Frame = -2 Query: 608 WYLYLSKLVTISGTSG--VISRLLLDQFIFSPVFIGVFMSLLVTLEGKPSLVVPKLKQEW 435 W+ +L K V + G++ +++R+ DQ +F+P FIG+F+ + LEG V KL++ + Sbjct: 67 WFRFLQKRVVVPGSTNKTILARVAADQGLFAPTFIGIFLGSMAVLEGTD--VKEKLQKNY 124 Query: 434 FSSLIANWQLWIPFQFLNFYFVPQKLQVLAANFVALAWNVILSY 303 + +L NW +W Q +NF VP +VL N +++ WN LS+ Sbjct: 125 WEALSTNWMVWPFVQMVNFKVVPLDHRVLFVNVISIGWNCYLSW 168
>PXMP2_HUMAN (Q9NR77) Peroxisomal membrane protein 2 (22 kDa peroxisomal| membrane protein) Length = 194 Score = 76.3 bits (186), Expect = 9e-14 Identities = 37/104 (35%), Positives = 60/104 (57%), Gaps = 1/104 (0%) Frame = -2 Query: 614 HFWYLYLSKLVTISGTSGVISRLLLDQFIFSPVFIGVFMSLLVTLEGKP-SLVVPKLKQE 438 HF+Y ++ + + RLLLD+ +F+P F+ +F ++ LEGK S K++ Sbjct: 87 HFFYFFMEHWIPPEVPLAGLRRLLLDRLVFAPAFLMLFFLIMNFLEGKDASAFAAKMRGG 146 Query: 437 WFSSLIANWQLWIPFQFLNFYFVPQKLQVLAANFVALAWNVILS 306 ++ +L NW++W P QF+N +VP K +VL AN AL W L+ Sbjct: 147 FWPALRMNWRVWTPLQFININYVPLKFRVLFANLAALFWYAYLA 190
>PXMP2_RAT (Q07066) Peroxisomal membrane protein 2 (22 kDa peroxisomal| membrane protein) Length = 193 Score = 75.9 bits (185), Expect = 1e-13 Identities = 38/104 (36%), Positives = 61/104 (58%), Gaps = 1/104 (0%) Frame = -2 Query: 614 HFWYLYLSKLVTISGTSGVISRLLLDQFIFSPVFIGVFMSLLVTLEGKP-SLVVPKLKQE 438 H+ YL++ V + RLLLD+ F+P F+ +F ++ LEGK S+ V K++ Sbjct: 86 HYLYLFMEYWVPPEVPWARVKRLLLDRLFFAPTFLLLFFFVMNLLEGKNISVFVAKMRSG 145 Query: 437 WFSSLIANWQLWIPFQFLNFYFVPQKLQVLAANFVALAWNVILS 306 ++ +L NW++W P QF+N +VP + +VL AN AL W L+ Sbjct: 146 FWPALQMNWRMWTPLQFININYVPLQFRVLFANMAALFWYAYLA 189
>SYM1_YARLI (Q6CAW5) Protein SYM1| Length = 202 Score = 74.7 bits (182), Expect = 2e-13 Identities = 35/93 (37%), Positives = 55/93 (59%), Gaps = 1/93 (1%) Frame = -2 Query: 560 VISRLLLDQFIFSPVFIGVFMSLLVTLEGK-PSLVVPKLKQEWFSSLIANWQLWIPFQFL 384 VI+++ +DQ +F+P IG + S++ LEGK P + LK +++ +L W +W FQ Sbjct: 73 VIAKVAIDQAVFAPSSIGYYFSVMGLLEGKSPDTIWQSLKNQYWDTLKCGWMIWPAFQLF 132 Query: 383 NFYFVPQKLQVLAANFVALAWNVILSYKAHKKV 285 NF VP +VLA+N L WN L+Y+ K+ Sbjct: 133 NFGIVPPNFRVLASNCCGLVWNTFLAYQNANKM 165
>SYM1_YEAST (Q06563) Protein SYM1 (Stress-inducible yeast MPV17 protein 1)| Length = 197 Score = 73.9 bits (180), Expect = 4e-13 Identities = 37/112 (33%), Positives = 64/112 (57%), Gaps = 6/112 (5%) Frame = -2 Query: 608 WYLYLSKLVTISGT-----SGVISRLLLDQFIFSPVFIGVFMSLLVTLEGKPSLVVP-KL 447 WY L+ + + S ++ R+ +DQ F+P+ + + + + +EG+ V K+ Sbjct: 70 WYKILNNKIYMRNRPQYHWSNMVLRVAVDQLAFAPLGLPFYFTCMSIMEGRSFDVAKLKI 129 Query: 446 KQEWFSSLIANWQLWIPFQFLNFYFVPQKLQVLAANFVALAWNVILSYKAHK 291 K++W+ +L+ NW +W FQ +NF VP + ++LA N VA+ WN LSYK K Sbjct: 130 KEQWWPTLLTNWAVWPLFQAINFSVVPLQHRLLAVNVVAIFWNTYLSYKNSK 181
>MPV17_BOVIN (Q2KIN6) Protein Mpv17| Length = 176 Score = 73.6 bits (179), Expect = 6e-13 Identities = 39/107 (36%), Positives = 61/107 (57%), Gaps = 1/107 (0%) Frame = -2 Query: 608 WYLYLSKLVTISGTSGVISRLLLDQFIFSPVFIGVFMSLLVTLEGKPSLVV-PKLKQEWF 432 WY L +L+ + + ++LLDQ F+P F+G F+ L+ TL G + KL++++ Sbjct: 69 WYRVLDRLIPGTTKVDALKKMLLDQGGFAPCFLGCFLPLVGTLNGLSAQDNWAKLQRDFP 128 Query: 431 SSLIANWQLWIPFQFLNFYFVPQKLQVLAANFVALAWNVILSYKAHK 291 +LI N+ LW Q NFY VP ++ VA+ WN LS+KAH+ Sbjct: 129 DALITNYYLWPAVQLANFYLVPLHYRLAVVQCVAVIWNSYLSWKAHR 175
>MPV17_RAT (Q5BK62) Protein Mpv17| Length = 176 Score = 73.2 bits (178), Expect = 7e-13 Identities = 39/107 (36%), Positives = 59/107 (55%), Gaps = 1/107 (0%) Frame = -2 Query: 608 WYLYLSKLVTISGTSGVISRLLLDQFIFSPVFIGVFMSLLVTLEGKPSLVV-PKLKQEWF 432 WY L L+ + + ++LLDQ F+P F+G F+ L+ L G + KLK+++ Sbjct: 69 WYRVLDHLIPGTTKVNALKKMLLDQGGFAPCFLGCFLPLVGVLNGMSAQDNWAKLKRDYP 128 Query: 431 SSLIANWQLWIPFQFLNFYFVPQKLQVLAANFVALAWNVILSYKAHK 291 +LI N+ LW Q NFY VP ++ VA+ WN LS+KAH+ Sbjct: 129 DALITNYYLWPAVQLANFYLVPLHYRLAVVQCVAVVWNSYLSWKAHQ 175
>SYM1_CANAL (Q59Q43) Protein SYM1| Length = 195 Score = 73.2 bits (178), Expect = 7e-13 Identities = 37/121 (30%), Positives = 66/121 (54%), Gaps = 14/121 (11%) Frame = -2 Query: 608 WYLYLSKLVTISGTS---------GVISRLLLDQFIFSPVFIGV---FMSLLVTLEGKPS 465 WY +L+ V + + + R+++DQ +F+P FIG+ + S+ + +P Sbjct: 75 WYKFLNTKVVWTRNAQKPQYQRSMSTLLRVMVDQLVFAP-FIGIPLYYSSMTILENRQPF 133 Query: 464 L--VVPKLKQEWFSSLIANWQLWIPFQFLNFYFVPQKLQVLAANFVALAWNVILSYKAHK 291 L ++ K W+ +L +NW +W FQF NFY +P + ++LA N +++ WN LSY H Sbjct: 134 LDNIIDKFNTSWWITLKSNWLVWPLFQFFNFYLLPVQFRLLAVNIISIGWNTYLSYVMHS 193 Query: 290 K 288 + Sbjct: 194 Q 194
>MPV17_CAEBR (Q60SZ2) Mpv17-like protein| Length = 189 Score = 72.8 bits (177), Expect = 9e-13 Identities = 42/134 (31%), Positives = 65/134 (48%), Gaps = 1/134 (0%) Frame = -2 Query: 674 DLKRXXXXXXXXXXXXXXXLHFWYLYLSKLVTISGTSGVISRLLLDQFIFSPVFIGVFMS 495 D KR L+ W+ L ++ + + V SR+ +DQF+FSP F + + Sbjct: 44 DYKRTARFTCLAAVFIAPPLNVWFRVLERVRHSNRHAQVFSRMSIDQFMFSPFFNAIILV 103 Query: 494 LLVTLEGKP-SLVVPKLKQEWFSSLIANWQLWIPFQFLNFYFVPQKLQVLAANFVALAWN 318 L LEG S V K+K +W+ ++ +LW Q +NFYFVP +V+ VA WN Sbjct: 104 NLRLLEGFSFSKSVDKMKNDWYDVYTSSLRLWPAVQLINFYFVPLNYRVILIQVVAFFWN 163 Query: 317 VILSYKAHKKVIAE 276 LS+K + + Sbjct: 164 SWLSFKTQTPALED 177
>SYM1_CRYNE (Q5KND6) Protein SYM1| Length = 190 Score = 72.8 bits (177), Expect = 9e-13 Identities = 44/134 (32%), Positives = 66/134 (49%), Gaps = 1/134 (0%) Frame = -2 Query: 674 DLKRXXXXXXXXXXXXXXXLHFWYLYLSKLVTISGTSGVISRLLLDQFIFSPVFIGVFMS 495 DL R ++ W+ L ++ S +R+ LDQF F+PV + F + Sbjct: 47 DLPRTARIVTWGGILFAPTVNLWFRTLERIPIRSRWPATFARVGLDQFGFAPVILSGFFT 106 Query: 494 LLVTLEGKP-SLVVPKLKQEWFSSLIANWQLWIPFQFLNFYFVPQKLQVLAANFVALAWN 318 + +EGK + K + +F +L ANW L+IPFQ LN VP + ++LA N V + WN Sbjct: 107 AMTFMEGKDFNAAKVKWHESFFPTLQANWMLFIPFQILNMGLVPLQYRLLAVNAVNIPWN 166 Query: 317 VILSYKAHKKVIAE 276 LS + K AE Sbjct: 167 AFLSLQNAKGRKAE 180
>SYM1_KLULA (Q6CIY7) Protein SYM1| Length = 195 Score = 72.4 bits (176), Expect = 1e-12 Identities = 38/108 (35%), Positives = 63/108 (58%), Gaps = 5/108 (4%) Frame = -2 Query: 608 WYLYLSKLVTISGT---SGVISRLLLDQFIFSPVFIGVFMSLLVTLEGKPSLVVPKLKQE 438 WY +L++ V + + +R+ DQ +F+PV I ++ ++ LEGK SLV K K E Sbjct: 70 WYKFLNQKVIVKPGKHWTNTAARVGCDQLLFAPVGIPMYYGVMSILEGK-SLVDAKKKIE 128 Query: 437 --WFSSLIANWQLWIPFQFLNFYFVPQKLQVLAANFVALAWNVILSYK 300 W+ +L+ NW +W FQ +NF VP ++ + N +++ WN LS+K Sbjct: 129 DNWWPTLVTNWYVWPAFQLINFSLVPVHHRLFSVNIISIFWNAFLSFK 176
>MPV17_MOUSE (P19258) Protein Mpv17 (Mpv-17)| Length = 176 Score = 72.4 bits (176), Expect = 1e-12 Identities = 39/107 (36%), Positives = 59/107 (55%), Gaps = 1/107 (0%) Frame = -2 Query: 608 WYLYLSKLVTISGTSGVISRLLLDQFIFSPVFIGVFMSLLVTLEGKPSLVV-PKLKQEWF 432 WY L L+ + + ++LLDQ F+P F+G F+ L+ L G + KLK+++ Sbjct: 69 WYKVLDHLIPGTTKVHALKKMLLDQGGFAPCFLGCFLPLVGILNGMSAQDNWAKLKRDYP 128 Query: 431 SSLIANWQLWIPFQFLNFYFVPQKLQVLAANFVALAWNVILSYKAHK 291 +LI N+ LW Q NFY VP ++ VA+ WN LS+KAH+ Sbjct: 129 DALITNYYLWPAVQLANFYLVPLHYRLAVVQCVAIVWNSYLSWKAHQ 175
>SYM1_ASHGO (Q754F0) Protein SYM1| Length = 182 Score = 71.2 bits (173), Expect = 3e-12 Identities = 35/107 (32%), Positives = 64/107 (59%), Gaps = 5/107 (4%) Frame = -2 Query: 608 WYLYLSKL----VTISGTSGVISRLLLDQFIFSPVFIGVFMSLLVTLEGKPSLVVP-KLK 444 WY +LS + + + + V++R+ DQ IF+P+ + ++ + + +EG V +L Sbjct: 69 WYRFLSTVRLGRLPQAHWANVLARVACDQLIFAPIGVPLYYTAMALMEGGSLEDVRIRLS 128 Query: 443 QEWFSSLIANWQLWIPFQFLNFYFVPQKLQVLAANFVALAWNVILSY 303 ++W+S+L+ANW +W FQ NF VP + ++L N +++ WN LSY Sbjct: 129 EKWWSTLLANWIVWPAFQLCNFSLVPVQHRLLTVNVLSIFWNTYLSY 175
>SYM1_ASPFU (Q4WDZ0) Protein sym1| Length = 196 Score = 71.2 bits (173), Expect = 3e-12 Identities = 36/102 (35%), Positives = 58/102 (56%), Gaps = 1/102 (0%) Frame = -2 Query: 608 WYLYLSKLVTI-SGTSGVISRLLLDQFIFSPVFIGVFMSLLVTLEGKPSLVVPKLKQEWF 432 W+ L + + + S V+ R+ DQ +F+P IGVF+S + LEG + KL++ ++ Sbjct: 83 WFQVLQRRINLPSAQRTVVGRVAADQLLFAPTMIGVFLSSMSVLEG--GSLSEKLERSYW 140 Query: 431 SSLIANWQLWIPFQFLNFYFVPQKLQVLAANFVALAWNVILS 306 +L ANW +W Q +NF VP + +VL N + + WN LS Sbjct: 141 PALKANWTVWPFLQLVNFALVPLQFRVLTVNVLNIGWNCFLS 182
>MPV17_HUMAN (P39210) Protein Mpv17| Length = 176 Score = 70.5 bits (171), Expect = 5e-12 Identities = 37/107 (34%), Positives = 59/107 (55%), Gaps = 1/107 (0%) Frame = -2 Query: 608 WYLYLSKLVTISGTSGVISRLLLDQFIFSPVFIGVFMSLLVTLEGKPSLVV-PKLKQEWF 432 WY L + + + + ++LLDQ F+P F+G F+ L+ L G + KL++++ Sbjct: 69 WYKVLDRFIPGTTKVDALKKMLLDQGGFAPCFLGCFLPLVGALNGLSAQDNWAKLQRDYP 128 Query: 431 SSLIANWQLWIPFQFLNFYFVPQKLQVLAANFVALAWNVILSYKAHK 291 +LI N+ LW Q NFY VP ++ VA+ WN LS+KAH+ Sbjct: 129 DALITNYYLWPAVQLANFYLVPLHYRLAVVQCVAVIWNSYLSWKAHR 175
>SYM1_CANGA (Q6FXJ3) Protein SYM1| Length = 210 Score = 68.9 bits (167), Expect = 1e-11 Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 5/107 (4%) Frame = -2 Query: 608 WYLYLSKLVTISGT----SGVISRLLLDQFIFSPVFIGVFMSLLVTLEGKP-SLVVPKLK 444 WY +L+K+ + S ++ R+ +DQ F+P+ + + + LEG K+K Sbjct: 83 WYRFLTKVKFSNKPAKHWSNMVLRVCVDQLGFAPLGLPFYFGCMSLLEGHGLGAAREKIK 142 Query: 443 QEWFSSLIANWQLWIPFQFLNFYFVPQKLQVLAANFVALAWNVILSY 303 +W+ +L NW +W FQ +NF VP + ++LAAN VA+ WN LSY Sbjct: 143 LQWWDTLKTNWCVWPLFQMVNFSLVPLQHRLLAANVVAIFWNTFLSY 189
>SYM1_USTMA (Q4P9K6) Protein SYM1| Length = 199 Score = 66.6 bits (161), Expect = 7e-11 Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 1/94 (1%) Frame = -2 Query: 575 SGTSGVISRLLLDQFIFSPVFIGVFMSLLVTLEG-KPSLVVPKLKQEWFSSLIANWQLWI 399 S + + +++ LDQ I SP F+ +F +EG P K+ W+ +L W LWI Sbjct: 79 SKAANIATKVALDQAIASPAFVALFFGATTIMEGGSPDQAKNKIIHNWWPTLKTAWGLWI 138 Query: 398 PFQFLNFYFVPQKLQVLAANFVALAWNVILSYKA 297 P Q LN VP ++L N V++ WN LS K+ Sbjct: 139 PVQTLNMALVPPSQRLLFVNVVSIFWNTFLSIKS 172
>MPV17_DROME (Q9V492) Mpv17-like protein| Length = 168 Score = 66.2 bits (160), Expect = 9e-11 Identities = 42/105 (40%), Positives = 59/105 (56%), Gaps = 4/105 (3%) Frame = -2 Query: 608 WYLYLSKLV--TISGTSGVISRLLLDQFIFSPVFIGVFMSLLVTLE-GKP-SLVVPKLKQ 441 WY +L V T S ++++L+DQ +F+P F + MS LV L G+P + ++ Sbjct: 60 WYHFLESRVPKTYSPMRRGVTKMLVDQTLFAPPFT-MAMSFLVPLSNGEPIDRIRQRILD 118 Query: 440 EWFSSLIANWQLWIPFQFLNFYFVPQKLQVLAANFVALAWNVILS 306 + S L+ N+ LW Q LNF FVP QVL A F+AL WN LS Sbjct: 119 SYLSILVRNYMLWPAAQMLNFRFVPLGYQVLYAQFIALVWNCYLS 163
>SYM1_DEBHA (Q6BMY0) Protein SYM1| Length = 206 Score = 62.4 bits (150), Expect = 1e-09 Identities = 35/116 (30%), Positives = 57/116 (49%), Gaps = 15/116 (12%) Frame = -2 Query: 608 WYLYLSKL----------VTISGTSGVISRLLLDQFIFSPVFIGV-----FMSLLVTLEG 474 WY L K+ T+S ++++ +DQ +F+P FIG+ MS+L + Sbjct: 68 WYRLLHKINFPFPKTKVSPTVSKVLNTLTKVGVDQLVFAP-FIGIPLYYSVMSVLEFHDN 126 Query: 473 KPSLVVPKLKQEWFSSLIANWQLWIPFQFLNFYFVPQKLQVLAANFVALAWNVILS 306 + KL WF++L NW +W FQ NF +P + ++L N ++ WN LS Sbjct: 127 PLQVAREKLHAHWFNTLKTNWVVWPTFQLFNFALIPVQFRLLVVNIFSIGWNCYLS 182
>YD1E_SCHPO (Q10244) Hypothetical protein C4G9.14 in chromosome I| Length = 221 Score = 62.0 bits (149), Expect = 2e-09 Identities = 37/105 (35%), Positives = 58/105 (55%), Gaps = 2/105 (1%) Frame = -2 Query: 608 WYLYLSKLV-TISGTSGVISRLLLDQFIFSPVFIGVFMSLLVTLEGKP-SLVVPKLKQEW 435 W++ LS ++ T + ++ R+ LDQFIF+P+ I F + E K + ++ + Sbjct: 109 WFVALSNVIQTENPFIAIVLRVALDQFIFAPLGIVFFFLFMGITECKSYERLKSYFRKHY 168 Query: 434 FSSLIANWQLWIPFQFLNFYFVPQKLQVLAANFVALAWNVILSYK 300 + +L AN+ LW Q NF FVP LQV+ AN V++ W LS K Sbjct: 169 WPTLKANYILWPAVQLFNFTFVPLVLQVIFANAVSMVWTAYLSLK 213
>SYM1_ASPOR (Q2TXA2) Protein sym1| Length = 173 Score = 59.7 bits (143), Expect = 8e-09 Identities = 30/102 (29%), Positives = 55/102 (53%), Gaps = 1/102 (0%) Frame = -2 Query: 608 WYLYLSKLVTISGTSG-VISRLLLDQFIFSPVFIGVFMSLLVTLEGKPSLVVPKLKQEWF 432 W+ +L + V + + +++R+ DQ +F+P + F++ + +EG + K + + Sbjct: 67 WFGFLQRNVVLKNSKATIVARVAADQCLFTPTHLTCFLTSMAIMEGSDP--IEKWRNSFL 124 Query: 431 SSLIANWQLWIPFQFLNFYFVPQKLQVLAANFVALAWNVILS 306 S AN +W Q +NF VP + +VL N V+L WN +LS Sbjct: 125 PSYKANLTIWPLVQGVNFSIVPLEYRVLVVNLVSLGWNCLLS 166
>MPV17_CAEEL (Q7YWV6) Mpv17-like protein| Length = 181 Score = 53.1 bits (126), Expect = 8e-07 Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 1/109 (0%) Frame = -2 Query: 608 WYLYLSKLVTISGTSGVISRLLLDQFIFSPVF-IGVFMSLLVTLEGKPSLVVPKLKQEWF 432 W+ L K+ + + ++ +L +DQ FSP F + +L + LK++WF Sbjct: 66 WFRLLEKVKGNNKSLLLVKKLCIDQLCFSPCFNAAILFNLRLLQHQSAEKSWDLLKEDWF 125 Query: 431 SSLIANWQLWIPFQFLNFYFVPQKLQVLAANFVALAWNVILSYKAHKKV 285 + + ++W Q +N FVP +V+ VA WN LSY K + Sbjct: 126 NIYATSLKVWPFVQVVNLCFVPLNYRVILNQVVAFFWNCYLSYITQKPI 174
>PMP22_ARATH (Q9ZS51) Peroxisomal membrane protein PMP22 (22 kDa peroxisomal| membrane protein) Length = 190 Score = 47.0 bits (110), Expect = 6e-05 Identities = 32/139 (23%), Positives = 64/139 (46%), Gaps = 3/139 (2%) Frame = -2 Query: 686 VPELDLKRXXXXXXXXXXXXXXXLHFWYLYLSKLVT-ISGTSGVISRLLLDQFIFSPVFI 510 + ++ L+R HF++ YL K T V +++L+Q SP+ Sbjct: 47 IQKIQLRRVLLKVIFAGGFLGPAGHFFHTYLDKFFKGKKDTQTVAKKVILEQLTLSPLNH 106 Query: 509 GVFMSLL-VTLEGKP-SLVVPKLKQEWFSSLIANWQLWIPFQFLNFYFVPQKLQVLAANF 336 +FM V +E P +LV ++K+ + + + W + ++N+ +VP +V+ + Sbjct: 107 LLFMIYYGVVIERTPWTLVRERIKKTYPTVQLTAWTFFPVVGWINYKYVPLHFRVILHSL 166 Query: 335 VALAWNVILSYKAHKKVIA 279 VA W + L+ +A +A Sbjct: 167 VAFFWGIFLTLRARSMTLA 185
>ATP6_GADMO (P55778) ATP synthase a chain (EC 3.6.3.14) (ATPase protein 6)| Length = 227 Score = 35.8 bits (81), Expect = 0.13 Identities = 21/60 (35%), Positives = 31/60 (51%) Frame = -2 Query: 545 LLDQFIFSPVFIGVFMSLLVTLEGKPSLVVPKLKQEWFSSLIANWQLWIPFQFLNFYFVP 366 L DQF SP F+G+ M L+ P L++P W S+ + + Q W +F N F+P Sbjct: 5 LFDQFS-SPSFLGIPMILMAL--ALPWLLIPTPTSRWLSNRVVSLQGWFIARFTNQLFLP 61
>ALCA_BORPE (P65199) Alcaligin biosynthesis enzyme (EC 1.-.-.-)| Length = 461 Score = 31.6 bits (70), Expect = 2.4 Identities = 15/48 (31%), Positives = 26/48 (54%) Frame = +1 Query: 88 QAALNKKDGH*FTILSKCSIGRVIQTRR*DKLIIGLFFQPYISACCNR 231 Q L+ + H + + + ++ R KL++GL QPY+ ACC+R Sbjct: 121 QGVLHDPESHSYLVTGQHTMSGQRFMFRCRKLVLGLGSQPYLPACCDR 168
>ALCA_BORPA (P65200) Alcaligin biosynthesis enzyme (EC 1.-.-.-)| Length = 461 Score = 31.6 bits (70), Expect = 2.4 Identities = 15/48 (31%), Positives = 26/48 (54%) Frame = +1 Query: 88 QAALNKKDGH*FTILSKCSIGRVIQTRR*DKLIIGLFFQPYISACCNR 231 Q L+ + H + + + ++ R KL++GL QPY+ ACC+R Sbjct: 121 QGVLHDPESHSYLVTGQHTMSGQRFMFRCRKLVLGLGSQPYLPACCDR 168
>ALCA_BORBR (Q44740) Alcaligin biosynthesis enzyme (EC 1.-.-.-)| Length = 461 Score = 31.6 bits (70), Expect = 2.4 Identities = 15/48 (31%), Positives = 26/48 (54%) Frame = +1 Query: 88 QAALNKKDGH*FTILSKCSIGRVIQTRR*DKLIIGLFFQPYISACCNR 231 Q L+ + H + + + ++ R KL++GL QPY+ ACC+R Sbjct: 121 QGVLHDPESHSYLVTGQHTMSGQRFMFRCRKLVLGLGSQPYLPACCDR 168
>TECTA_MOUSE (O08523) Alpha-tectorin precursor| Length = 2155 Score = 31.2 bits (69), Expect = 3.2 Identities = 12/35 (34%), Positives = 18/35 (51%) Frame = -1 Query: 105 FVECSLRCRLNMRCTICMSVCEEACSGFRRIT*CN 1 + CS+ C N C+SVC+ C+ R + CN Sbjct: 1365 YTSCSVTCPPNSHYESCVSVCQPRCAAIRLKSDCN 1399
>MNTH_STAAW (Q7A166) Probable manganese transport protein mntH| Length = 450 Score = 30.4 bits (67), Expect = 5.4 Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 4/84 (4%) Frame = -2 Query: 587 LVTISGTSGVISRLLLDQFIFSPVFIGVFMSL-LVTLE---GKPSLVVPKLKQEWFSSLI 420 L+ G + I +LL +FS VF+ + + L+ L+ L+ P + W + I Sbjct: 371 LIIFKGNAAKIEQLL----VFSQVFLSIALPFCLIPLQLATSNKDLMGPFYNKTWVN--I 424 Query: 419 ANWQLWIPFQFLNFYFVPQKLQVL 348 +W L I LN Y + Q Q L Sbjct: 425 ISWTLIIILSILNVYLIVQTFQEL 448
>MNTH_STAAS (Q6GAA9) Probable manganese transport protein mntH| Length = 450 Score = 30.4 bits (67), Expect = 5.4 Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 4/84 (4%) Frame = -2 Query: 587 LVTISGTSGVISRLLLDQFIFSPVFIGVFMSL-LVTLE---GKPSLVVPKLKQEWFSSLI 420 L+ G + I +LL +FS VF+ + + L+ L+ L+ P + W + I Sbjct: 371 LIIFKGNAAKIEQLL----VFSQVFLSIALPFCLIPLQLATSNKDLMGPFYNKTWVN--I 424 Query: 419 ANWQLWIPFQFLNFYFVPQKLQVL 348 +W L I LN Y + Q Q L Sbjct: 425 ISWTLIIILSILNVYLIVQTFQEL 448
>MNTH_STAAR (Q6GHY0) Probable manganese transport protein mntH| Length = 450 Score = 30.4 bits (67), Expect = 5.4 Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 4/84 (4%) Frame = -2 Query: 587 LVTISGTSGVISRLLLDQFIFSPVFIGVFMSL-LVTLE---GKPSLVVPKLKQEWFSSLI 420 L+ G + I +LL +FS VF+ + + L+ L+ L+ P + W + I Sbjct: 371 LIIFKGNAAKIEQLL----VFSQVFLSIALPFCLIPLQLATSNKDLMGPFYNKTWVN--I 424 Query: 419 ANWQLWIPFQFLNFYFVPQKLQVL 348 +W L I LN Y + Q Q L Sbjct: 425 ISWTLIIILSILNVYLIVQTFQEL 448
>MNTH_STAAN (Q99UZ7) Probable manganese transport protein mntH| Length = 450 Score = 30.4 bits (67), Expect = 5.4 Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 4/84 (4%) Frame = -2 Query: 587 LVTISGTSGVISRLLLDQFIFSPVFIGVFMSL-LVTLE---GKPSLVVPKLKQEWFSSLI 420 L+ G + I +LL +FS VF+ + + L+ L+ L+ P + W + I Sbjct: 371 LIIFKGNAAKIEQLL----VFSQVFLSIALPFCLIPLQLATSNKDLMGPFYNKTWVN--I 424 Query: 419 ANWQLWIPFQFLNFYFVPQKLQVL 348 +W L I LN Y + Q Q L Sbjct: 425 ISWTLIIILSILNVYLIVQTFQEL 448
>MNTH_STAAM (Q931T9) Probable manganese transport protein mntH| Length = 450 Score = 30.4 bits (67), Expect = 5.4 Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 4/84 (4%) Frame = -2 Query: 587 LVTISGTSGVISRLLLDQFIFSPVFIGVFMSL-LVTLE---GKPSLVVPKLKQEWFSSLI 420 L+ G + I +LL +FS VF+ + + L+ L+ L+ P + W + I Sbjct: 371 LIIFKGNAAKIEQLL----VFSQVFLSIALPFCLIPLQLATSNKDLMGPFYNKTWVN--I 424 Query: 419 ANWQLWIPFQFLNFYFVPQKLQVL 348 +W L I LN Y + Q Q L Sbjct: 425 ISWTLIIILSILNVYLIVQTFQEL 448
>MNTH_STAAC (Q5HGX9) Probable manganese transport protein mntH| Length = 450 Score = 30.4 bits (67), Expect = 5.4 Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 4/84 (4%) Frame = -2 Query: 587 LVTISGTSGVISRLLLDQFIFSPVFIGVFMSL-LVTLE---GKPSLVVPKLKQEWFSSLI 420 L+ G + I +LL +FS VF+ + + L+ L+ L+ P + W + I Sbjct: 371 LIIFKGNAAKIEQLL----VFSQVFLSIALPFCLIPLQLATSNKDLMGPFYNKTWVN--I 424 Query: 419 ANWQLWIPFQFLNFYFVPQKLQVL 348 +W L I LN Y + Q Q L Sbjct: 425 ISWTLIIILSILNVYLIVQTFQEL 448
>KAIC_SYNY3 (P74646) Circadian clock protein kinase kaiC (EC 2.7.11.1)| Length = 519 Score = 30.0 bits (66), Expect = 7.1 Identities = 15/49 (30%), Positives = 25/49 (51%) Frame = -2 Query: 602 LYLSKLVTISGTSGVISRLLLDQFIFSPVFIGVFMSLLVTLEGKPSLVV 456 L + + +SGTSG LL QF++ + + L +T E PS ++ Sbjct: 37 LPIGRTTLVSGTSGTGKTLLAVQFLYQGIHHFDYPGLFITFEESPSDII 85
>OR5BC_HUMAN (Q96R08) Olfactory receptor 5B12 (Olfactory receptor OR11-241)| Length = 314 Score = 29.6 bits (65), Expect = 9.2 Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 1/56 (1%) Frame = -2 Query: 611 FWYLYLSKLVTISGTSGVISRLLLDQFIFSPVFIGVFMSLLVTLE-GKPSLVVPKL 447 F ++YL +T+ G G+I +LLD + +P++ F+S L ++ G S V PK+ Sbjct: 29 FLFIYL---ITLVGNLGMIELILLDSCLHTPMYF--FLSNLSLVDFGYSSAVTPKV 79 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 98,644,665 Number of Sequences: 219361 Number of extensions: 1971829 Number of successful extensions: 4521 Number of sequences better than 10.0: 40 Number of HSP's better than 10.0 without gapping: 4342 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4497 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 6969622431 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
