ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags29j13
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 153 6e-34
2dbj|AK058717.1| Oryza sativa (japonica cultivar-group) cDNA clon... 153 6e-34
3gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 153 6e-34
4emb|AL845344.4|CNS08CB6 Oryza sativa chromosome 12, . BAC OSJNBb... 153 6e-34
5gb|DQ119301.1| Oryza sativa (indica cultivar-group) putative ubi... 137 4e-29
6gb|DQ083192.1| Oryza sativa (indica cultivar-group) clone 5S5H65... 103 5e-19
7gb|AY104559.1| Zea mays PCO133879 mRNA sequence 90 8e-15
8gb|BT016292.1| Zea mays clone Contig125 mRNA sequence 84 5e-13
9dbj|AK067123.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 7e-06
10dbj|AK059481.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 7e-06
11dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.027
12dbj|AP005651.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.027
13dbj|AP005612.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.027
14emb|AL138849.12| Human DNA sequence from clone RP5-965L7 on chro... 44 0.42
15emb|AL139016.8| Human DNA sequence from clone RP4-658C17 on chro... 44 0.42
16gb|AC011291.8| Homo sapiens BAC clone RP11-67G7 from 2, complete... 44 0.42
17emb|AL626783.16| Mouse DNA sequence from clone RP23-406B13 on ch... 44 0.42
18ref|NM_001016052.2| Xenopus tropicalis myosin X (myo10), mRNA 42 1.7
19gb|AC123835.4| Mus musculus BAC clone RP23-365J20 from chromosom... 42 1.7
20emb|CR762338.2| Xenopus tropicalis finished cDNA, clone TGas074f22 42 1.7
21dbj|AP001803.4| Homo sapiens genomic DNA, chromosome 11q, clone:... 42 1.7
22gb|CP000153.1| Thiomicrospira denitrificans ATCC 33889, complete... 40 6.6
23ref|XM_513410.1| PREDICTED: Pan troglodytes similar to The KIAA0... 40 6.6
24ref|NM_015269.1| Homo sapiens zinc finger, CCHC domain containin... 40 6.6
25ref|NM_001009881.1| Homo sapiens zinc finger, CCHC domain contai... 40 6.6
26ref|NM_001009882.1| Homo sapiens zinc finger, CCHC domain contai... 40 6.6
27gb|BC035820.1| Homo sapiens zinc finger, CCHC domain containing ... 40 6.6
28gb|AC154583.3| Mus musculus BAC clone RP23-248H18 from chromosom... 40 6.6
29ref|XM_532573.2| PREDICTED: Canis familiaris similar to zinc fin... 40 6.6
30ref|XM_853983.1| PREDICTED: Canis familiaris similar to zinc fin... 40 6.6
31gb|AC126444.3| Mus musculus BAC clone RP24-136A8 from chromosome... 40 6.6
32gb|AC121601.4| Mus musculus BAC clone RP23-305F2 from 1, complet... 40 6.6
33ref|NM_005019.3| Homo sapiens phosphodiesterase 1A, calmodulin-d... 40 6.6
34emb|AL606828.4| Human DNA sequence from clone RP11-20J6 on chrom... 40 6.6
35gb|U61850.2|GGU61850 Gallus gallus m2 muscarinic acetylcholine r... 40 6.6
36gb|BC022480.1| Homo sapiens phosphodiesterase 1A, calmodulin-dep... 40 6.6
37emb|CR860282.1| Pongo pygmaeus mRNA; cDNA DKFZp459G145 (from clo... 40 6.6
38dbj|AK220327.1| Mus musculus mRNA for mKIAA0191 protein 40 6.6
39gb|AC010061.6| Drosophila melanogaster 3L BAC RP98-11F16 (Roswel... 40 6.6
40dbj|AK095733.1| Homo sapiens cDNA FLJ38414 fis, clone FEBRA2009514 40 6.6
41ref|NM_175472.3| Mus musculus zinc finger, CCHC domain containin... 40 6.6
42dbj|AK049279.1| Mus musculus ES cells cDNA, RIKEN full-length en... 40 6.6
43dbj|AK031299.1| Mus musculus 13 days embryo male testis cDNA, RI... 40 6.6
44dbj|AK041821.1| Mus musculus 3 days neonate thymus cDNA, RIKEN f... 40 6.6
45tpg|BK004004.1| TPA: TPA_exp: Drosophila melanogaster Delta prot... 40 6.6
46gb|AC158181.2| Selaginella moellendorffii clone JGIASXY-5D1, com... 40 6.6
47emb|BX648783.1|HSM808934 Homo sapiens mRNA; cDNA DKFZp686I05143 ... 40 6.6
48gb|AC156454.2| Volvox carteri clone JGIAOBO-9I12, complete sequence 40 6.6
49gb|AF155197.1|AF155197 Acetivibrio cellulolyticus cellulosomal s... 40 6.6
50gb|AC007053.15|AC007053 Drosophila melanogaster, chromosome 3R, ... 40 6.6
51gb|AE003725.2| Drosophila melanogaster chromosome 3R, section 63... 40 6.6
52gb|AE003531.3| Drosophila melanogaster chromosome 3L, section 54... 40 6.6
53gb|AC160024.2| Pan troglodytes BAC clone CH251-374N3 from chromo... 40 6.6
54emb|CT571278.3| Mouse DNA sequence from clone RP24-372E22 on chr... 40 6.6
55dbj|D83776.1| Human mRNA for KIAA0191 gene, partial cds 40 6.6 
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  153 bits (77), Expect = 6e-34
 Identities = 101/109 (92%)
 Strand = Plus / Minus

                                                                            
Query: 12       ggagcagcaaataaagcaatcagtctcagctataaccatgtatacatgcccctaccaaaa 71
                |||| |||||||||||||||||||| | |||||||   ||||||||||||||||||||||
Sbjct: 18389990 ggagaagcaaataaagcaatcagtcacggctataattctgtatacatgcccctaccaaaa 18389931

                                                                 
Query: 72       tatttttcttatgtaccagctttgctctacacaaacaaagcaacatcta 120
                | ||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 18389930 tctttttcttatgtaccagctttgctctacacaaataaagcaacatcta 18389882



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 46/51 (90%)
 Strand = Plus / Minus

                                                                   
Query: 436      ctgattagctgtgtatgaccttttgggtgttgtgtcagtatgctccaagcc 486
                |||||| ||||| || |||||||| ||||||||||||||||| ||||||||
Sbjct: 18388163 ctgattggctgtataagacctttttggtgttgtgtcagtatgttccaagcc 18388113



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                                
Query: 391      ttctcaattgtagatcttcacaggcttctcatatgtgtgtcgattctg 438
                ||||||||| || || ||||||||||||||| | ||||| ||||||||
Sbjct: 18389606 ttctcaattataaattttcacaggcttctcaaaagtgtgacgattctg 18389559
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>dbj|AK058717.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-E02, full
           insert sequence
          Length = 650

 Score =  153 bits (77), Expect = 6e-34
 Identities = 101/109 (92%)
 Strand = Plus / Minus

                                                                       
Query: 12  ggagcagcaaataaagcaatcagtctcagctataaccatgtatacatgcccctaccaaaa 71
           |||| |||||||||||||||||||| | |||||||   ||||||||||||||||||||||
Sbjct: 519 ggagaagcaaataaagcaatcagtcacggctataattctgtatacatgcccctaccaaaa 460

                                                            
Query: 72  tatttttcttatgtaccagctttgctctacacaaacaaagcaacatcta 120
           | ||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 459 tctttttcttatgtaccagctttgctctacacaaataaagcaacatcta 411



 Score =  103 bits (52), Expect = 5e-19
 Identities = 85/96 (88%)
 Strand = Plus / Minus

                                                                       
Query: 391 ttctcaattgtagatcttcacaggcttctcatatgtgtgtcgattctgattagctgtgta 450
           ||||||||| || || ||||||||||||||| | ||||| ||||||||||| ||||| ||
Sbjct: 135 ttctcaattataaattttcacaggcttctcaaaagtgtgacgattctgattggctgtata 76

                                               
Query: 451 tgaccttttgggtgttgtgtcagtatgctccaagcc 486
            |||||||| ||||||||||||||||| ||||||||
Sbjct: 75  agacctttttggtgttgtgtcagtatgttccaagcc 40
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  153 bits (77), Expect = 6e-34
 Identities = 101/109 (92%)
 Strand = Plus / Minus

                                                                            
Query: 12       ggagcagcaaataaagcaatcagtctcagctataaccatgtatacatgcccctaccaaaa 71
                |||| |||||||||||||||||||| | |||||||   ||||||||||||||||||||||
Sbjct: 18316216 ggagaagcaaataaagcaatcagtcacggctataattctgtatacatgcccctaccaaaa 18316157

                                                                 
Query: 72       tatttttcttatgtaccagctttgctctacacaaacaaagcaacatcta 120
                | ||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 18316156 tctttttcttatgtaccagctttgctctacacaaataaagcaacatcta 18316108



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 46/51 (90%)
 Strand = Plus / Minus

                                                                   
Query: 436      ctgattagctgtgtatgaccttttgggtgttgtgtcagtatgctccaagcc 486
                |||||| ||||| || |||||||| ||||||||||||||||| ||||||||
Sbjct: 18314389 ctgattggctgtataagacctttttggtgttgtgtcagtatgttccaagcc 18314339



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                                
Query: 391      ttctcaattgtagatcttcacaggcttctcatatgtgtgtcgattctg 438
                ||||||||| || || ||||||||||||||| | ||||| ||||||||
Sbjct: 18315832 ttctcaattataaattttcacaggcttctcaaaagtgtgacgattctg 18315785
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>emb|AL845344.4|CNS08CB6 Oryza sativa chromosome 12, . BAC OSJNBb0108O14 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 138585

 Score =  153 bits (77), Expect = 6e-34
 Identities = 101/109 (92%)
 Strand = Plus / Minus

                                                                         
Query: 12    ggagcagcaaataaagcaatcagtctcagctataaccatgtatacatgcccctaccaaaa 71
             |||| |||||||||||||||||||| | |||||||   ||||||||||||||||||||||
Sbjct: 41889 ggagaagcaaataaagcaatcagtcacggctataattctgtatacatgcccctaccaaaa 41830

                                                              
Query: 72    tatttttcttatgtaccagctttgctctacacaaacaaagcaacatcta 120
             | ||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 41829 tctttttcttatgtaccagctttgctctacacaaataaagcaacatcta 41781



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 46/51 (90%)
 Strand = Plus / Minus

                                                                
Query: 436   ctgattagctgtgtatgaccttttgggtgttgtgtcagtatgctccaagcc 486
             |||||| ||||| || |||||||| ||||||||||||||||| ||||||||
Sbjct: 40062 ctgattggctgtataagacctttttggtgttgtgtcagtatgttccaagcc 40012



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                             
Query: 391   ttctcaattgtagatcttcacaggcttctcatatgtgtgtcgattctg 438
             ||||||||| || || ||||||||||||||| | ||||| ||||||||
Sbjct: 41505 ttctcaattataaattttcacaggcttctcaaaagtgtgacgattctg 41458
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>gb|DQ119301.1| Oryza sativa (indica cultivar-group) putative ubiquitin protease
            mRNA, partial cds
          Length = 1593

 Score =  137 bits (69), Expect = 4e-29
 Identities = 100/109 (91%), Gaps = 1/109 (0%)
 Strand = Plus / Minus

                                                                        
Query: 12   ggagcagcaaataaagcaatcagtctcagctataaccatgtatacatgcccctaccaaaa 71
            |||| |||||||||||||||||||| | |||||||   ||||||||||||||||||||||
Sbjct: 1439 ggagaagcaaataaagcaatcagtcacggctataattctgtatacatgcccctaccaaaa 1380

                                                             
Query: 72   tatttttcttatgtaccagctttgctctacacaaacaaagcaacatcta 120
            | |||| |||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1379 tctttt-cttatgtaccagctttgctctacacaaataaagcaacatcta 1332



 Score =  103 bits (52), Expect = 5e-19
 Identities = 85/96 (88%)
 Strand = Plus / Minus

                                                                        
Query: 391  ttctcaattgtagatcttcacaggcttctcatatgtgtgtcgattctgattagctgtgta 450
            ||||||||| || || ||||||||||||||| | ||||| ||||||||||| ||||| ||
Sbjct: 1056 ttctcaattataaattttcacaggcttctcaaaagtgtgacgattctgattggctgtata 997

                                                
Query: 451  tgaccttttgggtgttgtgtcagtatgctccaagcc 486
             |||||||| ||||||||||||||||| ||||||||
Sbjct: 996  agacctttttggtgttgtgtcagtatgttccaagcc 961
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>gb|DQ083192.1| Oryza sativa (indica cultivar-group) clone 5S5H65 mRNA sequence
          Length = 741

 Score =  103 bits (52), Expect = 5e-19
 Identities = 85/96 (88%)
 Strand = Plus / Minus

                                                                       
Query: 391 ttctcaattgtagatcttcacaggcttctcatatgtgtgtcgattctgattagctgtgta 450
           ||||||||| || || ||||||||||||||| | ||||| ||||||||||| ||||| ||
Sbjct: 431 ttctcaattataaattttcacaggcttctcaaaagtgtgacgattctgattggctgtata 372

                                               
Query: 451 tgaccttttgggtgttgtgtcagtatgctccaagcc 486
            |||||||| ||||||||||||||||| ||||||||
Sbjct: 371 agacctttttggtgttgtgtcagtatgttccaagcc 336



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Minus

                                              
Query: 86  accagctttgctctacacaaacaaagcaacatcta 120
           ||||||||||||||||||||| |||||||||||||
Sbjct: 741 accagctttgctctacacaaataaagcaacatcta 707
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>gb|AY104559.1| Zea mays PCO133879 mRNA sequence
          Length = 962

 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 84/97 (86%)
 Strand = Plus / Minus

                                                                       
Query: 390 tttctcaattgtagatcttcacaggcttctcatatgtgtgtcgattctgattagctgtgt 449
           |||||||||| || || ||||| ||||||||||| ||||| ||||||||||| |||||||
Sbjct: 459 tttctcaattataaattttcacgggcttctcataggtgtgccgattctgattggctgtgt 400

                                                
Query: 450 atgaccttttgggtgttgtgtcagtatgctccaagcc 486
           | |||||||| | |||||| || || |||||||||||
Sbjct: 399 aagaccttttcgatgttgtatcggtgtgctccaagcc 363



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 67/78 (85%), Gaps = 1/78 (1%)
 Strand = Plus / Minus

                                                                       
Query: 26  agcaatcagtctcagctataaccatgtatacatg-cccctaccaaaatatttttcttatg 84
           |||||||||| || ||||||| | |||||||||| ||||||||||||   |||| |||||
Sbjct: 804 agcaatcagtatcggctataatcctgtatacatgccccctaccaaaaatctttttttatg 745

                             
Query: 85  taccagctttgctctaca 102
           |||  |||||||||||||
Sbjct: 744 tactcgctttgctctaca 727
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>gb|BT016292.1| Zea mays clone Contig125 mRNA sequence
          Length = 1106

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 87/102 (85%)
 Strand = Plus / Minus

                                                                       
Query: 385 gaaggtttctcaattgtagatcttcacaggcttctcatatgtgtgtcgattctgattagc 444
           ||||||||||||||| || || || || ||||||||||| ||||| ||||||||||| | 
Sbjct: 636 gaaggtttctcaattataaatttttacgggcttctcataggtgtgccgattctgattgga 577

                                                     
Query: 445 tgtgtatgaccttttgggtgttgtgtcagtatgctccaagcc 486
           |||||| |||| ||| | |||||| ||||| |||||||||||
Sbjct: 576 tgtgtaagaccgtttcgatgttgtatcagtgtgctccaagcc 535



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                   
Query: 63  ctaccaaaatatttttcttatgtaccagctttgctctaca 102
           ||||||| ||||||||||||||| | ||||||||||||||
Sbjct: 896 ctaccaacatatttttcttatgtgctagctttgctctaca 857
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>dbj|AK067123.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096M22, full
            insert sequence
          Length = 3975

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 75/90 (83%)
 Strand = Plus / Minus

                                                                        
Query: 394  tcaattgtagatcttcacaggcttctcatatgtgtgtcgattctgattagctgtgtatga 453
            ||||||||| ||  |||| ||||||||||| ||||| || |||||||| |||||||| | 
Sbjct: 3348 tcaattgtaaattctcactggcttctcataggtgtgacggttctgattggctgtgtaggc 3289

                                          
Query: 454  ccttttgggtgttgtgtcagtatgctccaa 483
            |||||| ||||  || |||| |||||||||
Sbjct: 3288 cctttttggtgcagtatcagcatgctccaa 3259
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>dbj|AK059481.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-F05, full
           insert sequence
          Length = 1098

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 75/90 (83%)
 Strand = Plus / Minus

                                                                       
Query: 394 tcaattgtagatcttcacaggcttctcatatgtgtgtcgattctgattagctgtgtatga 453
           ||||||||| ||  |||| ||||||||||| ||||| || |||||||| |||||||| | 
Sbjct: 511 tcaattgtaaattctcactggcttctcataggtgtgacggttctgattggctgtgtaggc 452

                                         
Query: 454 ccttttgggtgttgtgtcagtatgctccaa 483
           |||||| ||||  || |||| |||||||||
Sbjct: 451 cctttttggtgcagtatcagcatgctccaa 422
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                        
Query: 88       cagctttgctctacacaaacaaag 111
                ||||||||||||||||||||||||
Sbjct: 12789892 cagctttgctctacacaaacaaag 12789915
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>dbj|AP005651.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0086N11
          Length = 146185

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                      
Query: 88     cagctttgctctacacaaacaaag 111
              ||||||||||||||||||||||||
Sbjct: 138169 cagctttgctctacacaaacaaag 138192
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>dbj|AP005612.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OSJNBa0073A18
          Length = 176755

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                    
Query: 88   cagctttgctctacacaaacaaag 111
            ||||||||||||||||||||||||
Sbjct: 9374 cagctttgctctacacaaacaaag 9397
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>emb|AL138849.12| Human DNA sequence from clone RP5-965L7 on chromosome 1p32.1-33
             Contains the 3' ends of genes FLJ34719 and KIAA0191,
             complete sequence
          Length = 127006

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 64    taccaaaatatttttcttatgt 85
             ||||||||||||||||||||||
Sbjct: 94767 taccaaaatatttttcttatgt 94788
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>emb|AL139016.8| Human DNA sequence from clone RP4-658C17 on chromosome 1p11.1-13.3,
             complete sequence
          Length = 100643

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 69    aaatatttttcttatgtaccag 90
             ||||||||||||||||||||||
Sbjct: 26796 aaatatttttcttatgtaccag 26817
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>gb|AC011291.8| Homo sapiens BAC clone RP11-67G7 from 2, complete sequence
          Length = 150214

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 142   tcaggacaatgaaatcagcatg 163
             ||||||||||||||||||||||
Sbjct: 27674 tcaggacaatgaaatcagcatg 27653
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>emb|AL626783.16| Mouse DNA sequence from clone RP23-406B13 on chromosome 4, complete
            sequence
          Length = 179370

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 64   taccaaaatatttttcttatgt 85
            ||||||||||||||||||||||
Sbjct: 9681 taccaaaatatttttcttatgt 9660
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>ref|NM_001016052.2| Xenopus tropicalis myosin X (myo10), mRNA
          Length = 1383

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 180 ggagcaggcaagacggaaagc 200
           |||||||||||||||||||||
Sbjct: 878 ggagcaggcaagacggaaagc 898
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>gb|AC123835.4| Mus musculus BAC clone RP23-365J20 from chromosome 9, complete sequence
          Length = 219799

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 131    gtctatcacactcaggacaat 151
              |||||||||||||||||||||
Sbjct: 146895 gtctatcacactcaggacaat 146875
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>emb|CR762338.2| Xenopus tropicalis finished cDNA, clone TGas074f22
          Length = 1383

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 180 ggagcaggcaagacggaaagc 200
           |||||||||||||||||||||
Sbjct: 878 ggagcaggcaagacggaaagc 898
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>dbj|AP001803.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-100N3, complete
             sequences
          Length = 159372

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 273   cacaaatgaccatatatttga 293
             |||||||||||||||||||||
Sbjct: 82776 cacaaatgaccatatatttga 82796
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>gb|CP000153.1| Thiomicrospira denitrificans ATCC 33889, complete genome
          Length = 2201561

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 99      tacacaaacaaagcaacatctata 122
               |||||||||||||||||| |||||
Sbjct: 1438573 tacacaaacaaagcaacaactata 1438596
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>ref|XM_513410.1| PREDICTED: Pan troglodytes similar to The KIAA0191 gene is
           expressed ubiquitously.~The KIAA0191 protein retains the
           C2H2 zinc-finger at its N-terminal region. (LOC456859),
           mRNA
          Length = 5007

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 66  ccaaaatatttttcttatgt 85
           ||||||||||||||||||||
Sbjct: 985 ccaaaatatttttcttatgt 966
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>ref|NM_015269.1| Homo sapiens zinc finger, CCHC domain containing 11 (ZCCHC11),
            transcript variant 2, mRNA
          Length = 5842

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 66   ccaaaatatttttcttatgt 85
            ||||||||||||||||||||
Sbjct: 1234 ccaaaatatttttcttatgt 1215
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>ref|NM_001009881.1| Homo sapiens zinc finger, CCHC domain containing 11 (ZCCHC11),
            transcript variant 1, mRNA
          Length = 5845

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 66   ccaaaatatttttcttatgt 85
            ||||||||||||||||||||
Sbjct: 1234 ccaaaatatttttcttatgt 1215
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>ref|NM_001009882.1| Homo sapiens zinc finger, CCHC domain containing 11 (ZCCHC11),
            transcript variant 3, mRNA
          Length = 5830

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 66   ccaaaatatttttcttatgt 85
            ||||||||||||||||||||
Sbjct: 1234 ccaaaatatttttcttatgt 1215
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>gb|BC035820.1| Homo sapiens zinc finger, CCHC domain containing 11, mRNA (cDNA clone
            IMAGE:5553553), partial cds
          Length = 2426

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 66   ccaaaatatttttcttatgt 85
            ||||||||||||||||||||
Sbjct: 1245 ccaaaatatttttcttatgt 1226
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>gb|AC154583.3| Mus musculus BAC clone RP23-248H18 from chromosome 13, complete sequence
          Length = 191052

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 419    tcatatgtgtgtcgattctg 438
              ||||||||||||||||||||
Sbjct: 154048 tcatatgtgtgtcgattctg 154067
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>ref|XM_532573.2| PREDICTED: Canis familiaris similar to zinc finger, CCHC domain
            containing 11 isoform b, transcript variant 1
            (LOC475349), mRNA
          Length = 5811

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 66   ccaaaatatttttcttatgt 85
            ||||||||||||||||||||
Sbjct: 1230 ccaaaatatttttcttatgt 1211
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>ref|XM_853983.1| PREDICTED: Canis familiaris similar to zinc finger, CCHC domain
           containing 11 isoform b, transcript variant 2
           (LOC475349), mRNA
          Length = 5206

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 66  ccaaaatatttttcttatgt 85
           ||||||||||||||||||||
Sbjct: 613 ccaaaatatttttcttatgt 594
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>gb|AC126444.3| Mus musculus BAC clone RP24-136A8 from chromosome 14, complete sequence
          Length = 141017

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 167   gcttcgttgtcagggagcaggcaa 190
             |||||||||||||| |||||||||
Sbjct: 56244 gcttcgttgtcaggtagcaggcaa 56221
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>gb|AC121601.4| Mus musculus BAC clone RP23-305F2 from 1, complete sequence
          Length = 190653

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 56     catgcccctaccaaaatatt 75
              ||||||||||||||||||||
Sbjct: 156431 catgcccctaccaaaatatt 156412
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>ref|NM_005019.3| Homo sapiens phosphodiesterase 1A, calmodulin-dependent (PDE1A),
            transcript variant 1, mRNA
          Length = 2414

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 144  aggacaatgaaatcagcatg 163
            ||||||||||||||||||||
Sbjct: 1830 aggacaatgaaatcagcatg 1849
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>emb|AL606828.4| Human DNA sequence from clone RP11-20J6 on chromosome 6, complete
             sequence
          Length = 33887

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 445   tgtgtatgaccttttgggtg 464
             ||||||||||||||||||||
Sbjct: 19147 tgtgtatgaccttttgggtg 19128
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>gb|U61850.2|GGU61850 Gallus gallus m2 muscarinic acetylcholine receptor gene, promoter
           region and exon 1
          Length = 3175

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 262 agaccttggcacacaaatga 281
           ||||||||||||||||||||
Sbjct: 856 agaccttggcacacaaatga 837
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>gb|BC022480.1| Homo sapiens phosphodiesterase 1A, calmodulin-dependent, transcript
            variant 1, mRNA (cDNA clone MGC:26303 IMAGE:4814064),
            complete cds
          Length = 2322

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 144  aggacaatgaaatcagcatg 163
            ||||||||||||||||||||
Sbjct: 1881 aggacaatgaaatcagcatg 1900
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>emb|CR860282.1| Pongo pygmaeus mRNA; cDNA DKFZp459G145 (from clone DKFZp459G145)
          Length = 4003

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 66   ccaaaatatttttcttatgt 85
            ||||||||||||||||||||
Sbjct: 1245 ccaaaatatttttcttatgt 1226
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>dbj|AK220327.1| Mus musculus mRNA for mKIAA0191 protein
          Length = 4710

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 66  ccaaaatatttttcttatgt 85
           ||||||||||||||||||||
Sbjct: 797 ccaaaatatttttcttatgt 778
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>gb|AC010061.6| Drosophila melanogaster 3L BAC RP98-11F16 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 165318

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 445   tgtgtatgaccttttgggtg 464
             ||||||||||||||||||||
Sbjct: 79502 tgtgtatgaccttttgggtg 79483
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>dbj|AK095733.1| Homo sapiens cDNA FLJ38414 fis, clone FEBRA2009514
          Length = 2245

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 66   ccaaaatatttttcttatgt 85
            ||||||||||||||||||||
Sbjct: 1263 ccaaaatatttttcttatgt 1244
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>ref|NM_175472.3| Mus musculus zinc finger, CCHC domain containing 11 (Zcchc11), mRNA
          Length = 6054

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 66   ccaaaatatttttcttatgt 85
            ||||||||||||||||||||
Sbjct: 1549 ccaaaatatttttcttatgt 1530
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>dbj|AK049279.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library,
           clone:C330018P17 product:zinc finger, CCHC domain
           containing 11, full insert sequence
          Length = 1789

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 66  ccaaaatatttttcttatgt 85
           ||||||||||||||||||||
Sbjct: 538 ccaaaatatttttcttatgt 519
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>dbj|AK031299.1| Mus musculus 13 days embryo male testis cDNA, RIKEN full-length
           enriched library, clone:6030404K05 product:hypothetical
           Zn-finger, CCHC type/PAP/25A-associated domain/PAP/25A
           core domain/Zinc finger CCHC-type profile/Zn-finger,
           C2H2 type containing protein, full insert sequence
          Length = 3282

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 66  ccaaaatatttttcttatgt 85
           ||||||||||||||||||||
Sbjct: 942 ccaaaatatttttcttatgt 923
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>dbj|AK041821.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched
            library, clone:A630040F24 product:zinc finger, CCHC
            domain containing 11, full insert sequence
          Length = 1643

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 66   ccaaaatatttttcttatgt 85
            ||||||||||||||||||||
Sbjct: 1555 ccaaaatatttttcttatgt 1536
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>tpg|BK004004.1| TPA: TPA_exp: Drosophila melanogaster Delta protein (Dl) gene, complete
             cds
          Length = 38445

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 10    caggagcagcaaataaagca 29
             ||||||||||||||||||||
Sbjct: 30855 caggagcagcaaataaagca 30874
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>gb|AC158181.2| Selaginella moellendorffii clone JGIASXY-5D1, complete sequence
          Length = 34893

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 398  ttgtagatcttcacaggctt 417
            ||||||||||||||||||||
Sbjct: 4143 ttgtagatcttcacaggctt 4124
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>emb|BX648783.1|HSM808934 Homo sapiens mRNA; cDNA DKFZp686I05143 (from clone DKFZp686I05143)
          Length = 4319

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 66  ccaaaatatttttcttatgt 85
           ||||||||||||||||||||
Sbjct: 650 ccaaaatatttttcttatgt 631
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>gb|AC156454.2| Volvox carteri clone JGIAOBO-9I12, complete sequence
          Length = 36564

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 460   gggtgttgtgtcagtatgct 479
             ||||||||||||||||||||
Sbjct: 15663 gggtgttgtgtcagtatgct 15682
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>gb|AF155197.1|AF155197 Acetivibrio cellulolyticus cellulosomal scaffoldin precursor (cipV)
           gene, complete cds
          Length = 6555

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 63  ctaccaaaatatttttctta 82
           ||||||||||||||||||||
Sbjct: 568 ctaccaaaatatttttctta 587
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>gb|AC007053.15|AC007053 Drosophila melanogaster, chromosome 3R, region 92A1-92A2, BAC clone
             BACR48K23, complete sequence
          Length = 173564

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 10    caggagcagcaaataaagca 29
             ||||||||||||||||||||
Sbjct: 67242 caggagcagcaaataaagca 67223
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>gb|AE003725.2| Drosophila melanogaster chromosome 3R, section 63 of 118 of the complete
              sequence
          Length = 253323

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 10     caggagcagcaaataaagca 29
              ||||||||||||||||||||
Sbjct: 215967 caggagcagcaaataaagca 215948
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>gb|AE003531.3| Drosophila melanogaster chromosome 3L, section 54 of 83 of the complete
              sequence
          Length = 271869

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 445    tgtgtatgaccttttgggtg 464
              ||||||||||||||||||||
Sbjct: 187953 tgtgtatgaccttttgggtg 187934
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>gb|AC160024.2| Pan troglodytes BAC clone CH251-374N3 from chromosome unknown, complete
              sequence
          Length = 163279

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 326    tctttagcacactttctcag 345
              ||||||||||||||||||||
Sbjct: 159569 tctttagcacactttctcag 159588
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>emb|CT571278.3| Mouse DNA sequence from clone RP24-372E22 on chromosome 13, complete
             sequence
          Length = 47954

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 419   tcatatgtgtgtcgattctg 438
             ||||||||||||||||||||
Sbjct: 23300 tcatatgtgtgtcgattctg 23281
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>dbj|D83776.1| Human mRNA for KIAA0191 gene, partial cds
          Length = 5203

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 66  ccaaaatatttttcttatgt 85
           ||||||||||||||||||||
Sbjct: 618 ccaaaatatttttcttatgt 599


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,325,122
Number of Sequences: 3902068
Number of extensions: 5325122
Number of successful extensions: 103250
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 103075
Number of HSP's gapped (non-prelim): 173
length of query: 486
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 464
effective length of database: 17,147,199,772
effective search space: 7956300694208
effective search space used: 7956300694208
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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