ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags29j10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PIS2_ARATH (Q8GUK6) Probable CDP-diacylglycerol--inositol 3-phos... 123 7e-28
2PIS1_ARATH (Q8LBA6) CDP-diacylglycerol--inositol 3-phosphatidylt... 123 7e-28
3YAT8_SCHPO (Q10153) Hypothetical protein C1D4.08 in chromosome I 55 2e-07
4CDIPT_MOUSE (Q8VDP6) CDP-diacylglycerol--inositol 3-phosphatidyl... 51 3e-06
5CDIPT_RAT (P70500) CDP-diacylglycerol--inositol 3-phosphatidyltr... 51 4e-06
6CDIPT_HUMAN (O14735) CDP-diacylglycerol--inositol 3-phosphatidyl... 50 7e-06
7PIS_YEAST (P06197) CDP-diacylglycerol--inositol 3-phosphatidyltr... 49 2e-05
8OR6Q1_HUMAN (Q8NGQ2) Olfactory receptor 6Q1 32 2.6
9COX10_MAGGR (P0C150) Protoheme IX farnesyltransferase, mitochond... 31 3.4
10RAVR2_HUMAN (Q9HCJ3) Protein raver-2 30 7.6
11PUR9_MOUSE (Q9CWJ9) Bifunctional purine biosynthesis protein PUR... 30 7.6
12LRC8D_HUMAN (Q7L1W4) Leucine-rich repeat-containing protein 8D 30 7.6
13LAMA5_HUMAN (O15230) Laminin alpha-5 chain precursor 30 9.9

>PIS2_ARATH (Q8GUK6) Probable CDP-diacylglycerol--inositol|
           3-phosphatidyltransferase 2 (EC 2.7.8.11)
           (Phosphatidylinositol synthase 2) (PtdIns synthase 2)
           (PI synthase 2) (AtPIS2)
          Length = 225

 Score =  123 bits (308), Expect = 7e-28
 Identities = 60/110 (54%), Positives = 84/110 (76%), Gaps = 1/110 (0%)
 Frame = -2

Query: 721 QMYSSFLSGKTSHKDVKHTGNGLLKLYYGYRPFMAFCCVASEVLYIILFLYADEKSTSLL 542
           QMYS+FLSGKTSHKDVK + + L +LYYG R FM +CCV+ EVLYIIL L A  ++ +L+
Sbjct: 112 QMYSTFLSGKTSHKDVKDSTSWLFRLYYGNRMFMGYCCVSCEVLYIILLLIATNQTENLM 171

Query: 541 N-TCRGILKESPLVVFMFISTLIGWALKQVINVIQMKTAADACVAFDSKR 395
           N   + +++ SPL + + +S + GW++KQ+INVIQMKTAAD CV +D ++
Sbjct: 172 NVVVKSLMQISPLSLLLALS-IFGWSIKQIINVIQMKTAADVCVLYDIEK 220



to top

>PIS1_ARATH (Q8LBA6) CDP-diacylglycerol--inositol 3-phosphatidyltransferase 1|
           (EC 2.7.8.11) (Phosphatidylinositol synthase 1) (PtdIns
           synthase 1) (PI synthase 1) (AtPIS1)
          Length = 227

 Score =  123 bits (308), Expect = 7e-28
 Identities = 60/109 (55%), Positives = 78/109 (71%)
 Frame = -2

Query: 721 QMYSSFLSGKTSHKDVKHTGNGLLKLYYGYRPFMAFCCVASEVLYIILFLYADEKSTSLL 542
           QMYS+FL+GK+SHKDVK + + L +LYYG R FM +CCV+ EVLYIIL L A  +S +LL
Sbjct: 115 QMYSTFLAGKSSHKDVKDSTSWLFRLYYGNRIFMCYCCVSCEVLYIILLLIAKNQSENLL 174

Query: 541 NTCRGILKESPLVVFMFISTLIGWALKQVINVIQMKTAADACVAFDSKR 395
           N     L +   + F+   TL GW++KQ INVIQMKTAAD CV +D ++
Sbjct: 175 NVVVATLTQISPLSFLLALTLFGWSMKQTINVIQMKTAADVCVLYDIEK 223



to top

>YAT8_SCHPO (Q10153) Hypothetical protein C1D4.08 in chromosome I|
          Length = 251

 Score = 55.1 bits (131), Expect = 2e-07
 Identities = 40/121 (33%), Positives = 60/121 (49%), Gaps = 8/121 (6%)
 Frame = -2

Query: 718 MYSSFLSGKTSHKDVKHTGNGLLKLYYGYRPFMAFCCVASEVLYIILFLYADEKST---- 551
           MYS+   G +SHK V    N +L+LYYG    +   C A+E+ ++ L+L +    T    
Sbjct: 128 MYSTLHQGASSHKTVTKKHNWMLRLYYGNNKVLFIFCAANEMFFVALYLLSFTPRTPPKL 187

Query: 550 SLLNTCRGILK--ESPLVVFMFISTLIG--WALKQVINVIQMKTAADACVAFDSKRGK*A 383
             L     I    E PL     ++ L G     KQ+INV+Q+  AA+A V  D ++ + A
Sbjct: 188 GYLPVPSFIYSTGELPLSYPTLLAVLCGPICLAKQIINVVQLVNAANALVKMDVEQRRAA 247

Query: 382 K 380
           K
Sbjct: 248 K 248



to top

>CDIPT_MOUSE (Q8VDP6) CDP-diacylglycerol--inositol 3-phosphatidyltransferase (EC|
           2.7.8.11) (Phosphatidylinositol synthase) (PtdIns
           synthase) (PI synthase)
          Length = 213

 Score = 51.2 bits (121), Expect = 3e-06
 Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 6/112 (5%)
 Frame = -2

Query: 718 MYSSFLSGKTSHKDVKHTGNGLLKLYYGYRPFMAFCCVASEVLYIILFLYADEKSTSLLN 539
           ++SS + G  SHK +  +GN +L++YY  RP +   C  +E+ Y +L+L+          
Sbjct: 109 LHSSVVRGSESHKMIDLSGNPVLRIYYTSRPALFTLCAGNELFYCLLYLFN--------- 159

Query: 538 TCRGILKESPLVVFMFISTLIGWA------LKQVINVIQMKTAADACVAFDS 401
                  E PLV  + +  +  W       LK VI+VI + TAA    A D+
Sbjct: 160 -----FSEGPLVGSVGLFRMGLWVTAPIALLKSVISVIHLITAARNMAALDA 206



to top

>CDIPT_RAT (P70500) CDP-diacylglycerol--inositol 3-phosphatidyltransferase (EC|
           2.7.8.11) (Phosphatidylinositol synthase) (PtdIns
           synthase) (PI synthase)
          Length = 213

 Score = 50.8 bits (120), Expect = 4e-06
 Identities = 33/112 (29%), Positives = 54/112 (48%), Gaps = 6/112 (5%)
 Frame = -2

Query: 718 MYSSFLSGKTSHKDVKHTGNGLLKLYYGYRPFMAFCCVASEVLYIILFLYADEKSTSLLN 539
           ++SS + G  SHK +  +GN +L++YY  RP +   C  +E+ Y +L+L+          
Sbjct: 109 LHSSVVRGSESHKMIDLSGNPVLRIYYTSRPALFTLCAGNELFYCLLYLFN--------- 159

Query: 538 TCRGILKESPLVVFMFISTLIGW------ALKQVINVIQMKTAADACVAFDS 401
                  E PLV  + +  +  W       LK +I+VI + TAA    A D+
Sbjct: 160 -----FSEGPLVGSVGLFRMGLWITAPIALLKSIISVIHLVTAARNMAALDA 206



to top

>CDIPT_HUMAN (O14735) CDP-diacylglycerol--inositol 3-phosphatidyltransferase (EC|
           2.7.8.11) (Phosphatidylinositol synthase) (PtdIns
           synthase) (PI synthase)
          Length = 213

 Score = 50.1 bits (118), Expect = 7e-06
 Identities = 33/112 (29%), Positives = 54/112 (48%), Gaps = 6/112 (5%)
 Frame = -2

Query: 718 MYSSFLSGKTSHKDVKHTGNGLLKLYYGYRPFMAFCCVASEVLYIILFLYADEKSTSLLN 539
           ++SS + G  SHK +  +GN +L++YY  RP +   C  +E+ Y +L+L+          
Sbjct: 109 LHSSVVRGSESHKMIDLSGNPVLRIYYTSRPALFTLCAGNELFYCLLYLFH--------- 159

Query: 538 TCRGILKESPLVVFMFISTLIGWA------LKQVINVIQMKTAADACVAFDS 401
                  E PLV  + +  +  W       LK +I+VI + TAA    A D+
Sbjct: 160 -----FSEGPLVGSVGLFRMGLWVTAPIALLKSLISVIHLITAARNMAALDA 206



to top

>PIS_YEAST (P06197) CDP-diacylglycerol--inositol 3-phosphatidyltransferase (EC|
           2.7.8.11) (Phosphatidylinositol synthase) (PTDINS
           synthase) (PI synthase)
          Length = 220

 Score = 48.9 bits (115), Expect = 2e-05
 Identities = 35/107 (32%), Positives = 50/107 (46%)
 Frame = -2

Query: 718 MYSSFLSGKTSHKDVKHTGNGLLKLYYGYRPFMAFCCVASEVLYIILFLYADEKSTSLLN 539
           MY+S  +GKTSHK V    + LL LYY  R  +   C  +E+ Y  L+L        L +
Sbjct: 118 MYASLSAGKTSHKSVGEGESRLLHLYYTRRDVLFTICAFNELFYAGLYL-------QLFS 170

Query: 538 TCRGILKESPLVVFMFISTLIGWALKQVINVIQMKTAADACVAFDSK 398
                 K + ++ F       G+  KQ  NV+Q+K AA      D+K
Sbjct: 171 NSATFGKWTTIISFP------GYVFKQTANVVQLKRAALILADNDAK 211



to top

>OR6Q1_HUMAN (Q8NGQ2) Olfactory receptor 6Q1|
          Length = 317

 Score = 31.6 bits (70), Expect = 2.6
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
 Frame = -3

Query: 174 DRQVLYCVRLFYMMIRS---CLRSSVVIWLLVLG*K**GFLPPVVPVYM 37
           DR V  C+ L Y    S   C+R +   WL+       GFL P++P+Y+
Sbjct: 125 DRYVAICMPLHYGAFVSWGTCIRLAAACWLV-------GFLTPILPIYL 166



to top

>COX10_MAGGR (P0C150) Protoheme IX farnesyltransferase, mitochondrial precursor|
           (EC 2.5.1.-) (Heme O synthase)
          Length = 552

 Score = 31.2 bits (69), Expect = 3.4
 Identities = 24/64 (37%), Positives = 30/64 (46%)
 Frame = -2

Query: 658 GLLKLYYGYRPFMAFCCVASEVLYIILFLYADEKSTSLLNTCRGILKESPLVVFMFISTL 479
           G+L L +G  P +AF   A+ VLY    +Y   K  S LNT  G        V   I  L
Sbjct: 308 GILALQFGVNPTVAFLGAANIVLY--AGIYTPLKRVSALNTWVG-------AVVGGIPPL 358

Query: 478 IGWA 467
           +GWA
Sbjct: 359 MGWA 362



to top

>RAVR2_HUMAN (Q9HCJ3) Protein raver-2|
          Length = 691

 Score = 30.0 bits (66), Expect = 7.6
 Identities = 13/24 (54%), Positives = 13/24 (54%)
 Frame = +2

Query: 2   SETQRKQPVNVGMYTGTTGGRNPY 73
           S TQ KQP  VGM  G   G  PY
Sbjct: 505 SNTQEKQPATVGMAEGNFSGSQPY 528



to top

>PUR9_MOUSE (Q9CWJ9) Bifunctional purine biosynthesis protein PURH [Includes:|
           Phosphoribosylaminoimidazolecarboxamide
           formyltransferase (EC 2.1.2.3) (AICAR transformylase);
           IMP cyclohydrolase (EC 3.5.4.10) (Inosinicase) (IMP
           synthetase) (ATIC)]
          Length = 592

 Score = 30.0 bits (66), Expect = 7.6
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -1

Query: 485 NSNWVGTQTSDQCHPDENSCRCLCGVRFEKRQ 390
           N N+   Q    C PDEN  R L G+R  +++
Sbjct: 359 NGNYCVLQMDQSCKPDENEVRTLFGLRLSQKR 390



to top

>LRC8D_HUMAN (Q7L1W4) Leucine-rich repeat-containing protein 8D|
          Length = 858

 Score = 30.0 bits (66), Expect = 7.6
 Identities = 26/109 (23%), Positives = 39/109 (35%), Gaps = 4/109 (3%)
 Frame = +3

Query: 345 PTQMKTKPWWSIFA-HLPLFESNATQASAAVFIWMTLITCLSAHPIRVEINMKTTRG--- 512
           PT    KPWW +F  +L +        +  + +    + CL   P  V     T  G   
Sbjct: 15  PTYRILKPWWDVFMDYLAVVMLMVAIFAGTMQLTKDQVVCLPVLPSPVNSKAHTPPGNAE 74

Query: 513 LSFRIPLHVLSKLVDFSSA*RNRIMYRTSEATQQNAMNGRYP*YNFRSP 659
           ++  IP    +   D      N I + TS  T    +   YP  +F  P
Sbjct: 75  VTTNIPKMEAATNQDQDGRTTNDISFGTSAVTPDIPLRATYPRTDFALP 123



to top

>LAMA5_HUMAN (O15230) Laminin alpha-5 chain precursor|
          Length = 3695

 Score = 29.6 bits (65), Expect = 9.9
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = -1

Query: 455 DQCHPDENSCRCLCGVRFEKRQVSKNGPPWFSFHL 351
           D+C PD   CRC  G  FE     +  P +F F L
Sbjct: 551 DRCDPDTGQCRCRVG--FEGATCDRCAPGYFHFPL 583


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 108,585,021
Number of Sequences: 219361
Number of extensions: 2284111
Number of successful extensions: 5953
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 5783
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5951
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7479594804
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top